Mogs (mannosyl-oligosaccharide glucosidase) - Rat Genome Database

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Gene: Mogs (mannosyl-oligosaccharide glucosidase) Rattus norvegicus
Analyze
Symbol: Mogs
Name: mannosyl-oligosaccharide glucosidase
RGD ID: 69240
Description: Predicted to enable Glc3Man9GlcNAc2 oligosaccharide glucosidase activity. Predicted to be involved in protein N-linked glycosylation. Predicted to be located in endoplasmic reticulum. Predicted to be active in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type IIb. Orthologous to human MOGS (mannosyl-oligosaccharide glucosidase); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Gcs1; glucosidase 1; glycoprotein-processing glucosidase I; LOC103692171
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84117,179,335 - 117,182,738 (+)NCBIGRCr8
mRatBN7.24115,621,623 - 115,625,026 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4115,621,623 - 115,625,032 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4121,098,230 - 121,101,633 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04116,873,422 - 116,876,825 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04115,487,997 - 115,491,399 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04113,948,328 - 113,951,731 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4113,948,514 - 113,951,847 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04178,633,399 - 178,636,802 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44117,327,609 - 117,331,012 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14117,572,089 - 117,575,493 (+)NCBI
Celera4104,615,822 - 104,619,225 (+)NCBICelera
Cytogenetic Map4q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. Online Mendelian Inheritance in Man, OMIM (TM). Online Mendelian Inheritance in Man, OMIM (TM).
5. GOA pipeline RGD automated data pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Tentative Sequence Identification Numbers Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
9. Chromosomal mapping of genes controlling development, histological grade, depth of invasion, and size of rat stomach carcinomas. Ushijima T, etal., Cancer Res 2000 Feb 15;60(4):1092-6.
Additional References at PubMed
PMID:1885588   PMID:19056867   PMID:19199708   PMID:19946888  


Genomics

Comparative Map Data
Mogs
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84117,179,335 - 117,182,738 (+)NCBIGRCr8
mRatBN7.24115,621,623 - 115,625,026 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4115,621,623 - 115,625,032 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4121,098,230 - 121,101,633 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04116,873,422 - 116,876,825 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04115,487,997 - 115,491,399 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04113,948,328 - 113,951,731 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4113,948,514 - 113,951,847 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04178,633,399 - 178,636,802 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44117,327,609 - 117,331,012 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14117,572,089 - 117,575,493 (+)NCBI
Celera4104,615,822 - 104,619,225 (+)NCBICelera
Cytogenetic Map4q34NCBI
MOGS
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38274,461,057 - 74,465,382 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl274,461,057 - 74,465,410 (-)EnsemblGRCh38hg38GRCh38
GRCh37274,688,184 - 74,692,509 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36274,541,692 - 74,546,045 (-)NCBINCBI36Build 36hg18NCBI36
Build 34274,599,850 - 74,604,161NCBI
Celera274,519,373 - 74,523,726 (-)NCBICelera
Cytogenetic Map2p13.1NCBI
HuRef274,424,479 - 74,428,832 (-)NCBIHuRef
CHM1_1274,617,601 - 74,621,954 (-)NCBICHM1_1
T2T-CHM13v2.0274,469,624 - 74,473,950 (-)NCBIT2T-CHM13v2.0
Mogs
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39683,092,477 - 83,095,883 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl683,092,477 - 83,095,879 (+)EnsemblGRCm39 Ensembl
GRCm38683,115,506 - 83,118,902 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl683,115,496 - 83,118,898 (+)EnsemblGRCm38mm10GRCm38
MGSCv37683,065,500 - 83,068,892 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36683,081,164 - 83,084,556 (+)NCBIMGSCv36mm8
Celera685,098,207 - 85,101,599 (+)NCBICelera
Cytogenetic Map6C3NCBI
cM Map635.94NCBI
Mogs
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542411,290,849 - 11,324,464 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542411,317,605 - 11,321,192 (+)NCBIChiLan1.0ChiLan1.0
MOGS
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21251,923,246 - 51,928,159 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A51,925,983 - 51,930,912 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A74,527,710 - 74,532,319 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A76,033,692 - 76,038,561 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A76,033,692 - 76,038,561 (-)Ensemblpanpan1.1panPan2
MOGS
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11748,666,220 - 48,670,848 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1748,667,224 - 48,670,646 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1748,309,013 - 48,312,735 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01749,526,369 - 49,530,091 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1749,522,868 - 49,530,078 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11748,543,489 - 48,547,212 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01748,610,253 - 48,613,972 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01749,167,959 - 49,171,681 (+)NCBIUU_Cfam_GSD_1.0
Mogs
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629210,049,848 - 10,053,698 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936556684,394 - 688,056 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936556684,203 - 688,037 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MOGS
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl368,578,218 - 68,581,990 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1368,578,207 - 68,581,995 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2371,840,317 - 71,844,100 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MOGS
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11432,812,318 - 32,816,358 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1432,812,065 - 32,820,175 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604579,354,282 - 79,358,588 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mogs
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474929,040,983 - 29,048,918 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474929,041,631 - 29,045,407 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mogs
10 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:130
Count of miRNA genes:113
Interacting mature miRNAs:117
Transcripts:ENSRNOT00000011521
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631689Scl4Serum cholesterol level QTL 41.90.008blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)495174120140174120Rat
1582232Gluco25Glucose level QTL 253.60.0023blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)485253748148090731Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1578655Bmd11Bone mineral density QTL 1111femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)490850165135850165Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
1357342Bw40Body weight QTL 400.001body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
631556Bp135Blood pressure QTL 1350.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)478881294117676292Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)470362013132642728Rat
70167Bw22Body weight QTL 223.1body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
731165Uae21Urinary albumin excretion QTL 212.40.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)4106649412151649412Rat
737821Hcar9Hepatocarcinoma resistance QTL 93.7liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)4109866907167139601Rat
1549832Bss3Bone structure and strength QTL 311femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)4109827074154827074Rat
70177Xhs1X-ray hypersensitivity QTL 125.1intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)482798864152731274Rat
724522Bp146Blood pressure QTL 1462.20.0021arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)473630210118630210Rat
61476Aia3Adjuvant induced arthritis QTL 33.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)486730991131730991Rat
1641919Alc22Alcohol consumption QTL 220.0005drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)481192555126192555Rat
1354660Salc1Saline consumption QTL 111.26drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)444463908148090542Rat
1298082Stresp4Stress response QTL 4blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)450119848146803430Rat
1578670Bss14Bone structure and strength QTL 1416.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)487327165132327165Rat
1300139Hrtrt6Heart rate QTL 62.85heart pumping trait (VT:2000009)heart rate (CMO:0000002)439524264116179656Rat
70200Alc18Alcohol consumption QTL 189.2drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)456647873149491524Rat
1331759Hrtrt13Heart rate QTL 133.54628heart pumping trait (VT:2000009)heart rate (CMO:0000002)4110275411168266883Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
1578662Bss15Bone structure and strength QTL 1519.6femur width (VT:1000666)femoral neck width (CMO:0001695)487327165132327165Rat
2302051Pia28Pristane induced arthritis QTL 285.30.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)473630210118630210Rat
2302049Pia32Pristane induced arthritis QTL 325.10.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)4105789505150789505Rat
6478763Anxrr46Anxiety related response QTL 460.07428locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
6478760Anxrr45Anxiety related response QTL 450.06717locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)459948935154902892Rat
738015Pia9Pristane induced arthritis QTL 94.50.048joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)480694870125694870Rat
2312567Glom19Glomerulus QTL 191.90.006kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)445456990146803430Rat
7207480Bss105Bone structure and strength QTL 1058.1femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)4109827074154827074Rat
634335Anxrr16Anxiety related response QTL 167.22locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)493308457167139447Rat
631646Stl4Serum triglyceride level QTL 46.50.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)473169846132642728Rat
634334Xhs3X-ray hypersensitivity QTL 310intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)484728680129854654Rat
61406Scwia1Streptococcal cell wall induced arthritis QTL 12.3joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)4106805662151805662Rat
1354612Foco1Food consumption QTL 18.87eating behavior trait (VT:0001431)food intake rate (CMO:0000427)444463908148090542Rat
634344Hcar7Hepatocarcinoma resistance QTL 77.8liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)470808386115808386Rat
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45214602146446691Rat
738031Alc14Alcohol consumption QTL 147.60.00003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)483428419177635233Rat
631662Hcar2Hepatocarcinoma resistance QTL 23.10.0003liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)478878504123878504Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)444463720155883716Rat
61418Pia5Pristane induced arthritis QTL 54.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)462277855128289560Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
1358202Gluco11Glucose level QTL 112.40.02adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)485379421167139601Rat
1641833Alc21Alcohol consumption QTL 218.60.0001drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)456698790126192555Rat
2306899Bp338Blood pressure QTL 3380.071arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)481006124120102625Rat
631674Iddm14Insulin dependent diabetes mellitus QTL 14blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)464528739157573521Rat
12798519Anxrr54Anxiety related response QTL 542.540.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4114627026159627026Rat
12798523Anxrr56Anxiety related response QTL 562.830.05locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)485253748150276390Rat
61434Cia3Collagen induced arthritis QTL 34.8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4103194656148194656Rat

Markers in Region
D15Mgh4  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21576,306,099 - 76,306,205 (+)MAPPERmRatBN7.2
Rnor_6.01583,947,714 - 83,947,819NCBIRnor6.0
Rnor_5.01587,456,591 - 87,456,696UniSTSRnor5.0
RGSC_v3.41583,349,371 - 83,349,477RGDRGSC3.4
RGSC_v3.41583,349,372 - 83,349,477UniSTSRGSC3.4
RGSC_v3.11583,365,152 - 83,365,257RGD
Celera1575,545,830 - 75,545,935UniSTS
RH 3.4 Map15528.0UniSTS
RH 3.4 Map15528.0RGD
RH 2.0 Map15405.8RGD
SHRSP x BN Map1548.3298RGD
Cytogenetic Map4q34UniSTS
D15Rat29  
Rat AssemblyChrPosition (strand)SourceJBrowse
RGSC_v3.415108,387,243 - 108,387,411UniSTSRGSC3.4
RGSC_v3.415108,387,242 - 108,387,411RGDRGSC3.4
RGSC_v3.115108,403,023 - 108,403,191RGD
Celera1599,127,682 - 99,127,850UniSTS
RH 3.4 Map15766.2RGD
RH 3.4 Map15766.2UniSTS
RH 2.0 Map15653.9RGD
SHRSP x BN Map1566.5198RGD
FHH x ACI Map1574.04RGD
Cytogenetic Map4q34UniSTS
D15Rat102  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21590,088,591 - 90,088,744 (+)MAPPERmRatBN7.2
Rnor_6.01598,027,558 - 98,027,710NCBIRnor6.0
Rnor_5.015101,499,599 - 101,499,751UniSTSRnor5.0
RGSC_v3.41597,700,574 - 97,700,727RGDRGSC3.4
RGSC_v3.41597,700,575 - 97,700,727UniSTSRGSC3.4
RGSC_v3.11597,716,355 - 97,716,507RGD
Celera1589,023,691 - 89,023,843UniSTS
RH 3.4 Map15619.29RGD
RH 3.4 Map15619.29UniSTS
RH 2.0 Map15556.3RGD
SHRSP x BN Map1558.5998RGD
Cytogenetic Map4q34UniSTS
RH140742  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24115,621,913 - 115,622,248 (+)MAPPERmRatBN7.2
Rnor_6.04113,948,619 - 113,948,953NCBIRnor6.0
Rnor_6.04114,814,347 - 114,814,681NCBIRnor6.0
Rnor_5.04178,633,690 - 178,634,024UniSTSRnor5.0
RGSC_v3.44117,327,900 - 117,328,234UniSTSRGSC3.4
Celera4104,616,113 - 104,616,447UniSTS
Cytogenetic Map4q34UniSTS
UniSTS:546869  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24115,623,776 - 115,624,811 (+)MAPPERmRatBN7.2
Rnor_6.04113,950,482 - 113,951,516NCBIRnor6.0
Rnor_6.04114,816,210 - 114,817,244NCBIRnor6.0
Rnor_5.04178,635,553 - 178,636,587UniSTSRnor5.0
Celera4104,617,976 - 104,619,010UniSTS
Cytogenetic Map4q34UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
7 7 43 50 50 21 21 21 6 90 45 26 17 25 29

Sequence


Ensembl Acc Id: ENSRNOT00000011521   ⟹   ENSRNOP00000011521
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl4113,948,514 - 113,951,847 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000083560   ⟹   ENSRNOP00000074720
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4115,621,623 - 115,625,032 (+)Ensembl
Rnor_6.0 Ensembl4114,814,056 - 114,817,465 (+)Ensembl
RefSeq Acc Id: NM_031749   ⟹   NP_113937
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84117,179,335 - 117,182,738 (+)NCBI
mRatBN7.24115,621,623 - 115,625,026 (+)NCBI
Rnor_6.04113,948,328 - 113,951,731 (+)NCBI
Rnor_5.04178,633,399 - 178,636,802 (+)NCBI
RGSC_v3.44117,327,609 - 117,331,012 (+)RGD
Celera4104,615,822 - 104,619,225 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_113937 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC36477 (Get FASTA)   NCBI Sequence Viewer  
  EDL91121 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000074720.1
GenBank Protein O88941 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_113937   ⟸   NM_031749
- UniProtKB: O88941 (UniProtKB/Swiss-Prot),   A0A0G2K8S6 (UniProtKB/TrEMBL),   A6IAK3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000011521   ⟸   ENSRNOT00000011521
Ensembl Acc Id: ENSRNOP00000074720   ⟸   ENSRNOT00000083560
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K8S6-F1-model_v2 AlphaFold A0A0G2K8S6 1-834 view protein structure
AF-O88941-F1-model_v2 AlphaFold O88941 1-834 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:69240 AgrOrtholog
BioCyc Gene G2FUF-44025 BioCyc
BioCyc Pathway PWY-7919 [protein N-glycosylation processing phase (plants and animals)] BioCyc
BioCyc Pathway Image PWY-7919 BioCyc
Ensembl Genes ENSRNOG00000008648 Ensembl
  ENSRNOG00000054176 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000083560.2 UniProtKB/TrEMBL
Gene3D-CATH 1.50.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.70.98.110 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro 6-hairpin_glycosidase_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  6hp_glycosidase-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glyco_hydro_63_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glyco_hydro_63N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glyco_hydro_63N_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glycoside_hydrolase_63 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:78947 UniProtKB/Swiss-Prot
NCBI Gene Mogs ENTREZGENE
PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10412 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Glyco_hydro_63 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glyco_hydro_63N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Mogs PhenoGen
RatGTEx ENSRNOG00000008648 RatGTEx
  ENSRNOG00000054176 RatGTEx
Superfamily-SCOP SSF48208 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGR TC228437
UniProt A0A0G2K8S6 ENTREZGENE, UniProtKB/TrEMBL
  A6IAK3 ENTREZGENE, UniProtKB/TrEMBL
  MOGS_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Mogs  mannosyl-oligosaccharide glucosidase  LOC103692171  mannosyl-oligosaccharide glucosidase  Data merged from RGD:9236907 737654 PROVISIONAL
2014-08-25 LOC103692171  mannosyl-oligosaccharide glucosidase      Symbol and Name status set to provisional 70820 PROVISIONAL
2012-01-25 Mogs  mannosyl-oligosaccharide glucosidase  Gcs1  glucosidase 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2003-04-09 Gcs1  glucosidase 1      Symbol and Name updated 629477 APPROVED
2003-03-10 Gcs1  glucosidase 1  Gcs1-pending  glucosidase 1  Data merged from RGD:619927 628472 PROVISIONAL
2002-08-07 Gcs1-pending  glucosidase 1      Symbol and Name status set to provisional 70820 PROVISIONAL
2002-06-10 Gcs1  glucosidase 1      Name updated 70584 APPROVED

RGD Curation Notes
Note Type Note Reference