Gene:
Ctbp2 ( Rattus norvegicus )
C-terminal binding protein 2
Description:gene produces two transcripts; one protein is a transcriptional repressor, while the other isoform is a major component of synaptic ribbons
ArrayIDs:GE13481; 6588182; 6499245; 1383718_at; 6359836; 5822223; 6262042; 1387113_at; 6623530; 5755222; 6067368; 6204677; 6576132; 5875750; rc_AA964253_at; 5964280; rc_AI011604_at; 5869325; 5853619; rc_AI169011_at; 6601156; 5888853; A_43_P12773; 5676326;  (details...)
Gene Type:protein-coding
 
Additional Data
 
Homologs
Homo sapiens: CTBP2     See the Human gene in context in:     UCSC     NCBI MapViewer
Mus musculus: Ctbp2     See the Mouse gene in context in:     UCSC     NCBI MapViewer
 
Comparative Map Data
SpeciesSymbolMap NameChr.Position
Rattus norvegicusCtbp2genome assembly 3.11192613495 - 192642816
  Rat Celera Assembly1185527008 - 185555538
  RGSC genome assembly v3.41192463615 - 192492934
  Cytogenetic1q41
Mus musculusCtbp2Mouse genome assembly build 36.17140178694 - 140315166
  Cytogenetic77 F3
Homo sapiensCTBP2human genome assembly10126667390 - 126706443
  Human genome assembly build 36.210126667391 - 126839019
  Cytogenetic10q26.13
 
View comparative maps:      NCBI MapViewer
 
 Genome
View:
 
Browsers:
 
 
 Annotation
Molecular Function
Gene Ontology
transcription corepressor activity,  protein binding (details...)
Biological Process
Gene Ontology
white fat cell differentiation,  negative regulation of transcription, DNA-dependent (details...)
Cellular Component
Gene Ontology
nucleus,  transcriptional repressor complex (details...)
Domain
NoteReference
contains an A domain specific for ribbons, and a B domain identical with CtBP2, a transcriptional repressor that in turn is related to 2-hydroxyacid dehydrogenases68229
 
 External Links
Databases
DATABASEIDSOURCE
PROSITE:D_2_HYOXYACID_DH_3IPI
UNIPARC:UPI00000E6533IPI
UNIPARC:UPI000019C022IPI
UNIPARC:UPI0000DC2269IPI
KEGG Report:rno:81717ENTREZGENE
HomoloGene Group ID:75187ENTREZGENE
Germonline:68372
Pfam:2-Hacid_dh_CIPI
Pfam:2-Hacid_dhIPI
KEGG Pathway:05220ENTREZGENE
KEGG Pathway:04330ENTREZGENE
KEGG Pathway:04310ENTREZGENE
InterPro:NAD(P)-bd_dom.IPI
InterPro:D-isomer_2_OHA_DH_NAD-bd.IPI
InterPro:D-isomer_2_OHA_DH.IPI
IPI:IPI00780712IPI
IPI:IPI00189984IPI
IPI:IPI00476123IPI
Ensembl Protein:ENSRNOP00000023574IPI
Ensembl Protein:ENSRNOP00000051785IPI
Ensembl Protein:ENSRNOP00000023404IPI
Gene3D-CATH:NAD(P)-bdIPI
Entrez Gene:Ctbp2ENTREZGENE
TIGR:TC204483
UniProt:CTBP2_RATIPI
UniProt:CTBP2_RATIPI
Ensembl Genes:ENSRNOG00000017326IPI
Superfamily-SCOP:NAD(P)-bdIPI
Sequences
Nucleotide:CH473953Get FASTASearch GEO Profiles
Nucleotide:AF222712Get FASTASearch GEO Profiles
Nucleotide:NM_053335Get FASTASearch GEO Profiles
(View all 3 Nucleotide Accessions)
Protein:EDM11743Get FASTA
Protein:EDM11744Get FASTA
Protein:EDM11745Get FASTA
Protein:EDM11746Get FASTA
Protein:AAG45952Get FASTA
Protein:Q9EQH5Get FASTA
Protein:NP_445787Get FASTA
(View all 7 Protein Accessions)
Clusters
UniGene:138124
 
 References
Curated References
6 references in RGD related to Ctbp2
Other References
1 other references at PubMed related to Ctbp2
 
 Database Information
RGD ID68372
History