Duox1 (dual oxidase 1) - Rat Genome Database

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Gene: Duox1 (dual oxidase 1) Rattus norvegicus
Analyze
Symbol: Duox1
Name: dual oxidase 1
RGD ID: 628760
Description: Predicted to enable NAD(P)H oxidase H2O2-forming activity and superoxide-generating NAD(P)H oxidase activity. Predicted to be involved in several processes, including hydrogen peroxide biosynthetic process; response to cAMP; and superoxide anion generation. Predicted to act upstream of or within reactive oxygen species metabolic process. Predicted to be located in cell leading edge; cell surface; and endoplasmic reticulum. Predicted to be part of NADPH oxidase complex. Predicted to be active in plasma membrane. Orthologous to human DUOX1 (dual oxidase 1); PARTICIPATES IN thyroid hormone biosynthetic pathway; INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83129,714,125 - 129,749,186 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3129,714,149 - 129,749,187 (+)EnsemblGRCr8
mRatBN7.23109,260,526 - 109,295,588 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3109,262,397 - 109,295,563 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3112,936,198 - 112,969,389 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03121,531,719 - 121,564,910 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03119,192,095 - 119,225,286 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03114,251,794 - 114,286,827 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3114,253,637 - 114,286,802 (+)Ensemblrn6Rnor6.0
Rnor_5.03120,791,108 - 120,826,222 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43109,095,250 - 109,128,415 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3108,160,238 - 108,192,976 (+)NCBICelera
RGSC_v3.13109,000,832 - 109,033,988 (+)NCBI
Cytogenetic Map3q35NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View
influenza A  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dimethoxyphenol  (ISO)
6-propyl-2-thiouracil  (EXP)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (EXP)
antirheumatic drug  (ISO)
apigenin  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (EXP)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
calcitriol  (ISO)
carbon nanotube  (ISO)
cerium trichloride  (ISO)
chlorpyrifos  (ISO)
copper(II) sulfate  (ISO)
cyfluthrin  (ISO)
cypermethrin  (ISO)
D-glucose  (ISO)
desferrioxamine B  (ISO)
diallyl trisulfide  (EXP)
dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate  (ISO)
elemental selenium  (ISO)
endosulfan  (EXP)
epoxiconazole  (ISO)
ethanol  (ISO)
formaldehyde  (ISO)
furan  (EXP)
furfural  (ISO)
genistein  (EXP)
gentamycin  (EXP)
glucose  (ISO)
gold atom  (ISO)
gold(0)  (ISO)
GSK-J4  (ISO)
kaempferol  (ISO)
lanthanum trichloride  (ISO)
lipopolysaccharide  (ISO)
malathion  (ISO)
methapyrilene  (ISO)
nickel atom  (ISO)
okadaic acid  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
pirinixic acid  (ISO)
potassium iodide  (EXP)
progesterone  (ISO)
resveratrol  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
Salvianolic acid A  (ISO)
selenium atom  (ISO)
silicon dioxide  (EXP)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
sodium chloride  (ISO)
sodium fluoride  (ISO)
sotorasib  (ISO)
testosterone  (EXP,ISO)
thyroxine  (ISO)
titanium dioxide  (EXP,ISO)
trametinib  (ISO)
trichloroethene  (EXP)
triptonide  (ISO)
zinc dichloride  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
apical plasma membrane  (IEA,ISO,ISS)
cell leading edge  (IEA,ISO)
cell surface  (IEA,ISO)
endoplasmic reticulum  (IEA,ISO,ISS)
NADPH oxidase complex  (IBA,IEA,ISO)
plasma membrane  (IBA,IEA,ISO,ISS)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Plasma proteomic analysis of patients infected with H1N1 influenza virus. Choi S, etal., Proteomics. 2014 Aug;14(16):1933-42. doi: 10.1002/pmic.201400030. Epub 2014 Jul 9.
2. Cloning of two human thyroid cDNAs encoding new members of the NADPH oxidase family. De Deken X, etal., J Biol Chem 2000 Jul 28;275(30):23227-33.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
7. GOA pipeline RGD automated data pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Duox1 is the main source of hydrogen peroxide in the rat thyroid cell line PCCl3. Rigutto S, etal., Exp Cell Res. 2007 Nov 1;313(18):3892-901. doi: 10.1016/j.yexcr.2007.06.011. Epub 2007 Jun 29.
Additional References at PubMed
PMID:11514595   PMID:12538618   PMID:15062544   PMID:16111680   PMID:19339556   PMID:20233719   PMID:20690191   PMID:22814254   PMID:32712621  


Genomics

Comparative Map Data
Duox1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83129,714,125 - 129,749,186 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3129,714,149 - 129,749,187 (+)EnsemblGRCr8
mRatBN7.23109,260,526 - 109,295,588 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3109,262,397 - 109,295,563 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3112,936,198 - 112,969,389 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03121,531,719 - 121,564,910 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03119,192,095 - 119,225,286 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03114,251,794 - 114,286,827 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3114,253,637 - 114,286,802 (+)Ensemblrn6Rnor6.0
Rnor_5.03120,791,108 - 120,826,222 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43109,095,250 - 109,128,415 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3108,160,238 - 108,192,976 (+)NCBICelera
RGSC_v3.13109,000,832 - 109,033,988 (+)NCBI
Cytogenetic Map3q35NCBI
DUOX1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381545,129,994 - 45,165,574 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1545,129,468 - 45,165,576 (+)Ensemblhg38GRCh38
GRCh371545,422,192 - 45,457,772 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361543,209,484 - 43,245,066 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341543,209,483 - 43,245,066NCBI
Celera1522,313,628 - 22,349,058 (+)NCBICelera
Cytogenetic Map15q21.1NCBI
HuRef1522,246,405 - 22,281,983 (+)NCBIHuRef
CHM1_11545,540,525 - 45,576,452 (+)NCBICHM1_1
T2T-CHM13v2.01542,938,016 - 42,973,584 (+)NCBIT2T-CHM13v2.0
Duox1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392122,143,525 - 122,178,454 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2122,146,153 - 122,178,453 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm382122,313,010 - 122,347,972 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2122,315,672 - 122,347,972 (+)Ensemblmm10GRCm38
MGSCv372122,141,408 - 122,173,708 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv362122,005,116 - 122,039,413 (+)NCBIMGSCv36mm8
MGSCv362123,286,960 - 123,321,338 (+)NCBIMGSCv36mm8
Celera2123,465,585 - 123,497,811 (+)NCBICelera
Cytogenetic Map2E5NCBI
cM Map260.63NCBI
Duox1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554098,229,199 - 8,255,003 (-)Ensembl
ChiLan1.0NW_0049554098,228,754 - 8,256,575 (-)NCBIChiLan1.0ChiLan1.0
DUOX1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21634,370,156 - 34,405,770 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11538,548,314 - 38,585,332 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01524,077,557 - 24,113,206 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11542,432,792 - 42,466,446 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1542,431,595 - 42,467,943 (+)EnsemblpanPan2panpan1.1
DUOX1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13011,556,024 - 11,588,203 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3011,556,024 - 11,588,202 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3011,612,190 - 11,644,063 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03011,692,796 - 11,724,747 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3011,692,815 - 11,724,746 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13011,599,266 - 11,631,208 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03011,721,544 - 11,753,719 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03011,841,362 - 11,873,559 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Duox1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864089,998,522 - 90,032,014 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364717,848,472 - 7,879,390 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364717,848,472 - 7,881,417 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DUOX1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1126,572,492 - 126,603,082 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11126,572,533 - 126,603,084 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21141,171,519 - 141,206,750 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DUOX1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12638,038,093 - 38,073,993 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2638,038,771 - 38,072,023 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666048102,986,753 - 103,021,591 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Duox1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473114,081,245 - 14,107,104 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473114,080,670 - 14,107,532 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Duox1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v15100,422,183 - 100,455,626 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Duox1
274 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:87
Count of miRNA genes:69
Interacting mature miRNAs:82
Transcripts:ENSRNOT00000046843
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2301414Kidm37Kidney mass QTL 370.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)396509147141509147Rat
1582238Bw68Body weight QTL 683.20.0064body mass (VT:0001259)body weight (CMO:0000012)373592512136118980Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)3129154923182114333Rat
1582239Epfw1Epididymal fat weight QTL 14.50.0006epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)373592512136118980Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)367641776167835660Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)358601291153936591Rat
1582216Bw65Body weight QTL 656.3body mass (VT:0001259)body weight (CMO:0000012)3122654702136118980Rat
737818Hcar12Hepatocarcinoma resistance QTL 122.6liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)349872657138829559Rat
1582218Bw74Body weight QTL 743.90.0021body mass (VT:0001259)body weight (CMO:0000012)373592512136118980Rat
1582219Bw63Body weight QTL 633.80.001body mass (VT:0001259)body weight (CMO:0000012)3116582412136118980Rat
1582221Kidm30Kidney mass QTL 303.50.0008kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)385062224136118980Rat
1582210Bw71Body weight QTL 713.30.0012body mass (VT:0001259)body weight (CMO:0000012)385062224136118980Rat
7387306Bw124Body weight QTL 1243.20.0003body mass (VT:0001259)body weight (CMO:0000012)3104545086149545086Rat
1300111Rf12Renal function QTL 123.78renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)381425008141509147Rat
724523Tsu1Thymus enlargement suppressive QTL 13.84thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)370845569136091483Rat
1600376Arunc5Aerobic running capacity QTL 50.21exercise endurance trait (VT:0002332)longest distance run on treadmill (CMO:0001406)393829559138829559Rat
8694437Bw167Body weight QTL 16722.460.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)3112250810157250810Rat
2302273Gluco35Glucose level QTL 355.30.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)3101255536134750886Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)379649560177741895Rat
2292613Ept16Estrogen-induced pituitary tumorigenesis QTL 168.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)367641995130815812Rat
1581503Cm58Cardiac mass QTL 582.70.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)396509147141509147Rat
1354611Despr2Despair related QTL 23.030.0028locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)3117537367162537367Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3125116475170116475Rat
631649Bp123Blood pressure QTL 1233.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3110225882155225882Rat
12879848Bw181Body weght QTL 1810.015body mass (VT:0001259)body weight (CMO:0000012)390755164141509147Rat
5686842Rf59Renal function QTL 59urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)3122395989167395989Rat
1358885Bp251Blood pressure QTL 2513.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)31141509147Rat
1581546Pur13Proteinuria QTL 132.930.0335urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)398651826167012663Rat
631665Bw8Body weight QTL 85.5body mass (VT:0001259)body weight (CMO:0000012)3125814931139636791Rat
1331758Bp207Blood pressure QTL 2072.848arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3110634702155634702Rat
1358888Bp264Blood pressure QTL 2644.43arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)35675975141509147Rat
1358186Ept2Estrogen-induced pituitary tumorigenesis QTL 28.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)367641995130815812Rat
724532Cm17Cardiac mass QTL 172heart mass (VT:0007028)calculated heart weight (CMO:0000073)3116188400161188400Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 56 153 91 90 59 49 59 6 293 138 11 132 72 87 31 16 16

Sequence


Ensembl Acc Id: ENSRNOT00000046843   ⟹   ENSRNOP00000045928
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3129,714,149 - 129,749,187 (+)Ensembl
mRatBN7.2 Ensembl3109,262,397 - 109,295,563 (+)Ensembl
Rnor_6.0 Ensembl3114,253,637 - 114,286,802 (+)Ensembl
RefSeq Acc Id: NM_153739   ⟹   NP_714961
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83129,715,996 - 129,749,161 (+)NCBI
mRatBN7.23109,262,397 - 109,295,563 (+)NCBI
Rnor_6.03114,253,637 - 114,286,802 (+)NCBI
Rnor_5.03120,791,108 - 120,826,222 (+)NCBI
RGSC_v3.43109,095,250 - 109,128,415 (+)RGD
Celera3108,160,238 - 108,192,976 (+)RGD
Sequence:
RefSeq Acc Id: XM_006234829   ⟹   XP_006234891
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83129,714,125 - 129,749,186 (+)NCBI
mRatBN7.23109,260,526 - 109,295,588 (+)NCBI
Rnor_6.03114,251,794 - 114,286,827 (+)NCBI
Rnor_5.03120,791,108 - 120,826,222 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_714961 (Get FASTA)   NCBI Sequence Viewer  
  XP_006234891 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAN33120 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000045928
GenBank Protein Q8CIY2 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_714961   ⟸   NM_153739
- Peptide Label: precursor
- UniProtKB: Q8CIY2 (UniProtKB/Swiss-Prot),   F1M6V7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006234891   ⟸   XM_006234829
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSRNOP00000045928   ⟸   ENSRNOT00000046843
Protein Domains
EF-hand   FAD-binding FR-type   Ferric oxidoreductase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8CIY2-F1-model_v2 AlphaFold Q8CIY2 1-1551 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:628760 AgrOrtholog
BioCyc Gene G2FUF-48100 BioCyc
Ensembl Genes ENSRNOG00000033348 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000046843 ENTREZGENE
Gene3D-CATH 1.10.640.10 UniProtKB/Swiss-Prot
  3.40.50.80 UniProtKB/Swiss-Prot
  EF-hand UniProtKB/Swiss-Prot
  Translation factors UniProtKB/Swiss-Prot
InterPro DUOX_peroxidase UniProtKB/Swiss-Prot
  EF-hand-dom_pair UniProtKB/Swiss-Prot
  EF_Hand_1_Ca_BS UniProtKB/Swiss-Prot
  EF_hand_dom UniProtKB/Swiss-Prot
  FAD-bd_8 UniProtKB/Swiss-Prot
  FAD-bd_FR_type UniProtKB/Swiss-Prot
  Fe3_Rdtase_TM_dom UniProtKB/Swiss-Prot
  Fe_red_NAD-bd_6 UniProtKB/Swiss-Prot
  FNR_nucleotide-bd UniProtKB/Swiss-Prot
  Haem_peroxidase_animal UniProtKB/Swiss-Prot
  Haem_peroxidase_sf UniProtKB/Swiss-Prot
  Haem_peroxidase_sf_animal UniProtKB/Swiss-Prot
  RBOH/FRE UniProtKB/Swiss-Prot
  Riboflavin_synthase-like_b-brl UniProtKB/Swiss-Prot
KEGG Report rno:266807 UniProtKB/Swiss-Prot
NCBI Gene 266807 ENTREZGENE
PANTHER NADPH OXIDASE UniProtKB/Swiss-Prot
  PTHR11972:SF75 UniProtKB/Swiss-Prot
Pfam An_peroxidase UniProtKB/Swiss-Prot
  EF-hand_1 UniProtKB/Swiss-Prot
  EF-hand_7 UniProtKB/Swiss-Prot
  FAD_binding_8 UniProtKB/Swiss-Prot
  Ferric_reduct UniProtKB/Swiss-Prot
  NAD_binding_6 UniProtKB/Swiss-Prot
PhenoGen Duox1 PhenoGen
PRINTS ANPEROXIDASE UniProtKB/Swiss-Prot
PROSITE EF_HAND_1 UniProtKB/Swiss-Prot
  EF_HAND_2 UniProtKB/Swiss-Prot
  FAD_FR UniProtKB/Swiss-Prot
  PEROXIDASE_3 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000033348 RatGTEx
SMART EFh UniProtKB/Swiss-Prot
Superfamily-SCOP SSF47473 UniProtKB/Swiss-Prot
  SSF48113 UniProtKB/Swiss-Prot
  SSF52343 UniProtKB/Swiss-Prot
  SSF63380 UniProtKB/Swiss-Prot
UniProt DUOX1_RAT UniProtKB/Swiss-Prot
  F1M6V7 ENTREZGENE, UniProtKB/TrEMBL
  Q8CIY2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-01-20 Duox1  dual oxidase 1      Symbol and Name status set to approved 1299863 APPROVED
2003-02-27 Duox1  dual oxidase 1      Symbol and Name status set to provisional 70820 PROVISIONAL