Rhoq (ras homolog family member Q) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Rhoq (ras homolog family member Q) Rattus norvegicus
Analyze
Symbol: Rhoq (Ensembl: Rhoq-ps1)
Name: ras homolog family member Q (Ensembl:ras homolog family member Q, pseudogene 1)
RGD ID: 621626
Description: Predicted to enable several functions, including GBD domain binding activity; GTP binding activity; and profilin binding activity. Predicted to be involved in several processes, including actin cytoskeleton organization; insulin receptor signaling pathway; and positive regulation of D-glucose import. Predicted to act upstream of or within regulation of cell shape. Predicted to be located in actin filament and membrane raft. Predicted to be active in plasma membrane. Orthologous to human RHOQ (ras homolog family member Q); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; INTERACTS WITH (+)-schisandrin B; 1-benzylpiperazine; 1-naphthyl isothiocyanate.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ras homolog gene family, member Q; ras-like protein; ras-like protein TC10; ras-related GTP-binding protein TC10; rho-related GTP-binding protein RhoQ; Tc10
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Rhoq-ps1  
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8613,368,499 - 13,403,929 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1115,757,909 - 115,759,467 (+)EnsemblGRCr8
mRatBN7.267,613,632 - 7,652,047 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1106,622,141 - 106,623,699 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx67,893,520 - 7,928,948 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.068,202,933 - 8,238,358 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.067,730,047 - 7,765,475 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0610,533,151 - 10,568,582 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl610,533,151 - 10,568,581 (+)Ensemblrn6Rnor6.0
Rnor_5.0620,521,668 - 20,557,099 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4610,414,042 - 10,449,472 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera67,350,412 - 7,385,836 (-)NCBICelera
RGSC_v3.1610,414,041 - 10,449,471 (+)NCBI
Cytogenetic Map6q12NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
1-benzylpiperazine  (EXP)
1-naphthyl isothiocyanate  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4,6-trinitrobenzenesulfonic acid  (EXP)
2-butoxyethanol  (ISO)
3-chloropropane-1,2-diol  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
6-propyl-2-thiouracil  (EXP)
all-trans-retinoic acid  (ISO)
ammonium chloride  (EXP)
aristolochic acid A  (ISO)
aristolochic acids  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
atrazine  (EXP)
benzo[a]pyrene diol epoxide I  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
butanal  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
carbamazepine  (ISO)
chlormequat chloride  (EXP)
chromium(6+)  (ISO)
cisplatin  (ISO)
clofibrate  (ISO)
clofibric acid  (EXP)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diallyl trisulfide  (ISO)
diarsenic trioxide  (ISO)
diazinon  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (ISO)
diclofenac  (ISO)
dieldrin  (ISO)
dorsomorphin  (ISO)
endosulfan  (EXP)
Enterolactone  (ISO)
entinostat  (ISO)
ethanol  (EXP)
fenthion  (ISO)
fipronil  (EXP)
fumonisin B1  (ISO)
gadodiamide hydrate  (ISO)
genistein  (ISO)
gentamycin  (EXP)
GSK-J4  (ISO)
isobutanol  (ISO)
methoxychlor  (EXP)
methylmercury chloride  (ISO)
microcystin-LR  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (EXP)
ochratoxin A  (EXP)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
Soman  (EXP)
succimer  (ISO)
sunitinib  (ISO)
tamibarotene  (ISO)
tamoxifen  (ISO)
tetrachloroethene  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
trovafloxacin  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vincristine  (ISO)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
actin filament  (ISO)
cytoplasm  (IEA)
membrane raft  (ISO)
plasma membrane  (IBA,IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. High-fat feeding effects on components of the CAP/Cbl signaling cascade in Sprague-Dawley rat skeletal muscle. Bernard JR, etal., Metabolism. 2006 Feb;55(2):203-12.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
8. GOA pipeline RGD automated data pipeline
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Rho GTPases in insulin-stimulated glucose uptake. Satoh T Small GTPases. 2014;5:e28102. doi: 10.4161/sgtp.28102. Epub 2014 Mar 10.
11. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
12. The small GTP-binding protein TC10 promotes nerve elongation in neuronal cells, and its expression is induced during nerve regeneration in rats. Tanabe K, etal., J Neurosci 2000 Jun 1;20(11):4138-44.
Additional References at PubMed
PMID:10445846   PMID:10967094   PMID:11309621   PMID:11821390   PMID:15489334   PMID:16105861   PMID:23533145   PMID:24297911  


Genomics

Comparative Map Data
Rhoq
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8613,368,499 - 13,403,929 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1115,757,909 - 115,759,467 (+)EnsemblGRCr8
mRatBN7.267,613,632 - 7,652,047 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1106,622,141 - 106,623,699 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx67,893,520 - 7,928,948 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.068,202,933 - 8,238,358 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.067,730,047 - 7,765,475 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0610,533,151 - 10,568,582 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl610,533,151 - 10,568,581 (+)Ensemblrn6Rnor6.0
Rnor_5.0620,521,668 - 20,557,099 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4610,414,042 - 10,449,472 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera67,350,412 - 7,385,836 (-)NCBICelera
RGSC_v3.1610,414,041 - 10,449,471 (+)NCBI
Cytogenetic Map6q12NCBI
RHOQ
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38246,542,490 - 46,584,688 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl246,541,806 - 46,584,688 (+)Ensemblhg38GRCh38
GRCh37246,769,629 - 46,811,827 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36246,623,371 - 46,665,331 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34246,681,525 - 46,721,071NCBI
Celera246,608,550 - 46,650,502 (+)NCBICelera
Cytogenetic Map2p21NCBI
HuRef246,508,355 - 46,549,243 (+)NCBIHuRef
CHM1_1246,700,205 - 46,742,118 (+)NCBICHM1_1
T2T-CHM13v2.0246,547,523 - 46,589,676 (+)NCBIT2T-CHM13v2.0
Rhoq
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391787,270,539 - 87,307,497 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1787,270,510 - 87,307,497 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381786,963,111 - 87,000,069 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1786,963,082 - 87,000,069 (+)Ensemblmm10GRCm38
MGSCv371787,362,451 - 87,399,409 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361786,871,437 - 86,908,395 (+)NCBIMGSCv36mm8
MGSCv361786,286,620 - 86,323,731 (+)NCBIMGSCv36mm8
Celera1791,341,979 - 91,379,066 (+)NCBICelera
Cytogenetic Map17E4NCBI
cM Map1756.9NCBI
Rhoq
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544113,457,757 - 13,495,221 (+)Ensembl
ChiLan1.0NW_00495544113,457,757 - 13,495,221 (+)NCBIChiLan1.0ChiLan1.0
RHOQ
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21279,807,211 - 79,847,883 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A79,811,179 - 79,851,851 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A46,657,884 - 46,698,604 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A47,589,343 - 47,629,200 (+)NCBIPanPan1.1PanPan1.1panPan2
RHOQ
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11048,766,623 - 48,807,198 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1048,768,191 - 48,804,129 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1048,621,692 - 48,661,408 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01049,638,479 - 49,678,182 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1049,638,165 - 49,679,038 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11049,346,518 - 49,386,173 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01049,636,763 - 49,676,458 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01049,819,868 - 49,859,560 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Rhoq
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629234,265,228 - 34,298,999 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365085,692,482 - 5,727,614 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365085,692,482 - 5,727,608 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RHOQ
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl393,973,653 - 94,012,580 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1393,970,545 - 94,012,660 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23100,054,930 - 100,097,052 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RHOQ
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11460,605,881 - 60,648,444 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1460,608,998 - 60,648,193 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604551,197,579 - 51,238,229 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rhoq
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473827,997,493 - 28,031,840 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Rhoq
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v175,986,533 - 6,022,546 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Rhoq
307 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:450
Count of miRNA genes:228
Interacting mature miRNAs:305
Transcripts:ENSRNOT00000020822
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6197587946975879Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6197587946975879Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6144788383Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6197587946975879Rat
2293706Bmd20Bone mineral density QTL 204.30.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)6125740059Rat
2292616Ept15Estrogen-induced pituitary tumorigenesis QTL 154.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6144788383Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6197587946975879Rat
2301964Bp323Blood pressure QTL 3234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6186868070Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6323998948239989Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6323998948239989Rat
1300128Rf16Renal function QTL 163.89renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6140163351Rat
70196BpQTLcluster7Blood pressure QTL cluster 76.82arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6120510098Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6323998948239989Rat
1358190Ept1Estrogen-induced pituitary tumorigenesis QTL 14.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6144788383Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6323998948239989Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6197587946975879Rat

Markers in Region
AW534145  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.267,652,116 - 7,652,296 (-)MAPPERmRatBN7.2
Rnor_6.0610,531,772 - 10,531,952NCBIRnor6.0
Rnor_5.0620,520,289 - 20,520,469UniSTSRnor5.0
RGSC_v3.4610,412,663 - 10,412,843UniSTSRGSC3.4
Celera67,387,044 - 7,387,224UniSTS
Cytogenetic Map6q12UniSTS
RH141769  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21106,625,204 - 106,625,396 (+)MAPPERmRatBN7.2
Rnor_6.0610,567,148 - 10,567,339NCBIRnor6.0
Rnor_5.0620,555,665 - 20,555,856UniSTSRnor5.0
Celera1100,835,165 - 100,835,356UniSTS
Celera67,351,655 - 7,351,846UniSTS
Cytogenetic Map6q12UniSTS
UniSTS:483156  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81115,758,829 - 115,759,490 (+)Marker Load Pipeline
mRatBN7.21106,623,061 - 106,623,722 (+)MAPPERmRatBN7.2
Rnor_6.01114,174,716 - 114,175,376NCBIRnor6.0
Rnor_5.01115,180,824 - 115,181,484UniSTSRnor5.0
RGSC_v3.41107,158,581 - 107,159,241UniSTSRGSC3.4
Cytogenetic Map6q12UniSTS
Cytogenetic Map1q22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 91 59 6 355 191 11 143 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000020822   ⟹   ENSRNOP00000020822
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl610,533,151 - 10,568,581 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000032154   ⟹   ENSRNOP00000097476
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1115,757,909 - 115,759,467 (+)Ensembl
mRatBN7.2 Ensembl1106,622,141 - 106,623,699 (+)Ensembl
RefSeq Acc Id: NM_053522   ⟹   NP_445974
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8613,368,499 - 13,403,929 (-)NCBI
RefSeq Acc Id: XM_063262565   ⟹   XP_063118635
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8613,368,501 - 13,403,551 (-)NCBI
RefSeq Acc Id: XM_063262566   ⟹   XP_063118636
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8613,368,501 - 13,403,619 (-)NCBI
Protein Sequences
Protein RefSeqs NP_445974 (Get FASTA)   NCBI Sequence Viewer  
  XP_063118635 (Get FASTA)   NCBI Sequence Viewer  
  XP_063118636 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH61760 (Get FASTA)   NCBI Sequence Viewer  
  BAA96292 (Get FASTA)   NCBI Sequence Viewer  
  EDM02657 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000101978
  ENSRNOP00000106302
GenBank Protein Q9JJL4 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Acc Id: ENSRNOP00000020822   ⟸   ENSRNOT00000020822
RefSeq Acc Id: NP_445974   ⟸   NM_053522
- UniProtKB: Q9JJL4 (UniProtKB/Swiss-Prot),   A0A8I6ANG6 (UniProtKB/TrEMBL),   A6H9F2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_063118636   ⟸   XM_063262566
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063118635   ⟸   XM_063262565
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000097476   ⟸   ENSRNOT00000032154

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9JJL4-F1-model_v2 AlphaFold Q9JJL4 1-205 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694388
Promoter ID:EPDNEW_R4913
Type:initiation region
Name:Rhoq_1
Description:ras homolog family member Q
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0610,533,143 - 10,533,203EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621626 AgrOrtholog
BioCyc Gene G2FUF-38709 BioCyc
Ensembl Genes ENSRNOG00000015415 Ensembl
  ENSRNOG00000021484 Ensembl
  ENSRNOG00000083467 ENTREZGENE
Ensembl Transcript ENSRNOT00000159370 ENTREZGENE
  ENSRNOT00000168770 ENTREZGENE
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:5621223 IMAGE-MGC_LOAD
InterPro P-loop_NTPase UniProtKB/Swiss-Prot
  Small_GTP-bd_dom UniProtKB/Swiss-Prot
  Small_GTPase UniProtKB/Swiss-Prot
  Small_GTPase_Rho UniProtKB/Swiss-Prot
KEGG Report rno:85428 UniProtKB/Swiss-Prot
MGC_CLONE MGC:72358 IMAGE-MGC_LOAD
NCBI Gene 85428 ENTREZGENE
PANTHER PTHR24072 UniProtKB/Swiss-Prot
Pfam Ras UniProtKB/Swiss-Prot
PhenoGen Rhoq PhenoGen
PRINTS RASTRNSFRMNG UniProtKB/Swiss-Prot
PROSITE RHO UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000015415 RatGTEx
  ENSRNOG00000021484 RatGTEx
  ENSRNOG00000083467 RatGTEx
SMART RAB UniProtKB/Swiss-Prot
  RAS UniProtKB/Swiss-Prot
  RHO UniProtKB/Swiss-Prot
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot
UniProt A0A8I6ANG6 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0L152_RAT UniProtKB/TrEMBL
  A6H9F2 ENTREZGENE, UniProtKB/TrEMBL
  Q9JJL4 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-10-15 Rhoq  ras homolog family member Q  Rhoq  ras homolog gene family, member Q  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Rhoq  ras homolog gene family, member Q  Tc10  ras-like protein  Symbol and Name updated 1299863 APPROVED
2002-08-07 Tc10  ras-like protein      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_product member of the Rho family of GTPases 634077