Eef1d (eukaryotic translation elongation factor 1 delta) - Rat Genome Database

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Gene: Eef1d (eukaryotic translation elongation factor 1 delta) Rattus norvegicus
Analyze
Symbol: Eef1d
Name: eukaryotic translation elongation factor 1 delta
RGD ID: 621174
Description: Predicted to enable several functions, including RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; guanyl-nucleotide exchange factor activity; and heat shock protein binding activity. Predicted to be involved in several processes, including cellular response to heat; cellular response to ionizing radiation; and positive regulation of transcription by RNA polymerase II. Predicted to be located in endoplasmic reticulum and nucleus. Predicted to be part of eukaryotic translation elongation factor 1 complex. Predicted to be active in cytosol and glutamatergic synapse. Orthologous to human EEF1D (eukaryotic translation elongation factor 1 delta); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: EF-1-delta; elongation factor 1-delta; eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein); guanine nucleotide exchange protein; LOC300033; translation elongation factor 1-delta subunit
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87109,462,645 - 109,478,021 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl7109,462,646 - 109,489,531 (-)EnsemblGRCr8
mRatBN7.27107,581,930 - 107,596,735 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7107,581,930 - 107,608,799 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx7109,321,443 - 109,329,841 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07111,545,121 - 111,553,519 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07111,491,044 - 111,499,448 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.07116,928,264 - 116,942,981 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7116,928,265 - 116,936,674 (-)Ensemblrn6Rnor6.0
Rnor_5.07116,820,231 - 116,835,552 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.47113,870,558 - 113,879,376 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7103,938,928 - 103,947,339 (-)NCBICelera
RGSC_v3.17113,904,788 - 113,913,606 (-)NCBI
Cytogenetic Map7q34NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2,6-dimethoxyphenol  (ISO)
2,6-dinitrotoluene  (EXP)
2-butoxyethanol  (ISO)
3-chloropropane-1,2-diol  (EXP)
4,4'-sulfonyldiphenol  (ISO)
acrolein  (ISO)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
ammonium chloride  (EXP)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
beta-naphthoflavone  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
bisphenol F  (ISO)
Brodifacoum  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
chlorpyrifos  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
clozapine  (ISO)
coumarin  (ISO)
CU-O LINKAGE  (ISO)
cyclosporin A  (ISO)
D-glucitol  (ISO)
deoxynivalenol  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
endosulfan  (EXP)
enzyme inhibitor  (ISO)
ethanol  (EXP)
fipronil  (EXP)
flutamide  (EXP)
folic acid  (ISO)
FR900359  (ISO)
furfural  (ISO)
gallic acid  (ISO)
gentamycin  (EXP)
gold atom  (ISO)
gold(0)  (ISO)
hydralazine  (ISO)
isobutanol  (ISO)
ivermectin  (ISO)
lead(0)  (ISO)
lead(II) chloride  (ISO)
methidathion  (ISO)
microcystin-LR  (ISO)
N-nitrosomorpholine  (EXP)
nefazodone  (EXP)
nimesulide  (EXP)
Nutlin-3  (ISO)
ochratoxin A  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
parathion  (ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
Propiverine  (EXP)
selenium atom  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (EXP,ISO)
sodium chloride  (ISO)
sodium dichromate  (EXP)
Soman  (EXP)
succimer  (ISO)
T-2 toxin  (EXP)
thapsigargin  (EXP)
thiram  (ISO)
trichloroethene  (EXP)
trimellitic anhydride  (ISO)
triphenyl phosphate  (ISO)
tungsten  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Oncogenic potential of mouse translation elongation factor-1 delta, a novel cadmium-responsive proto-oncogene. Joseph P, etal., J Biol Chem 2002 Feb 22;277(8):6131-6.
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. GOA pipeline RGD automated data pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8168075   PMID:8743958   PMID:12477932   PMID:12761501   PMID:18056256   PMID:21597468   PMID:21630459   PMID:23106098   PMID:24625528   PMID:25468996   PMID:28131823   PMID:30053369  
PMID:35352799  


Genomics

Comparative Map Data
Eef1d
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87109,462,645 - 109,478,021 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl7109,462,646 - 109,489,531 (-)EnsemblGRCr8
mRatBN7.27107,581,930 - 107,596,735 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7107,581,930 - 107,608,799 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx7109,321,443 - 109,329,841 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07111,545,121 - 111,553,519 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07111,491,044 - 111,499,448 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.07116,928,264 - 116,942,981 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7116,928,265 - 116,936,674 (-)Ensemblrn6Rnor6.0
Rnor_5.07116,820,231 - 116,835,552 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.47113,870,558 - 113,879,376 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7103,938,928 - 103,947,339 (-)NCBICelera
RGSC_v3.17113,904,788 - 113,913,606 (-)NCBI
Cytogenetic Map7q34NCBI
EEF1D
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388143,579,728 - 143,597,415 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8143,579,697 - 143,599,541 (-)Ensemblhg38GRCh38
GRCh378144,661,898 - 144,679,585 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368144,733,041 - 144,750,726 (-)NCBIBuild 36Build 36hg18NCBI36
Build 348144,733,040 - 144,750,726NCBI
Celera8140,972,129 - 140,990,084 (-)NCBICelera
Cytogenetic Map8q24.3NCBI
HuRef8139,913,388 - 139,931,374 (-)NCBIHuRef
CHM1_18144,702,015 - 144,719,993 (-)NCBICHM1_1
T2T-CHM13v2.08144,729,124 - 144,746,827 (-)NCBIT2T-CHM13v2.0
Eef1d
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391575,766,643 - 75,781,425 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1575,766,054 - 75,781,405 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381575,894,796 - 75,909,784 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1575,894,205 - 75,909,556 (-)Ensemblmm10GRCm38
MGSCv371575,725,230 - 75,739,770 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361575,722,055 - 75,736,595 (-)NCBIMGSCv36mm8
Celera1577,395,780 - 77,410,351 (-)NCBICelera
Cytogenetic Map15D3NCBI
cM Map1535.05NCBI
Eef1d
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554542,284,892 - 2,292,901 (-)Ensembl
ChiLan1.0NW_0049554542,284,892 - 2,299,169 (-)NCBIChiLan1.0ChiLan1.0
EEF1D
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27161,063,180 - 161,081,090 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18136,580,866 - 136,598,651 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08140,333,100 - 140,350,955 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18143,348,045 - 143,365,497 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8143,340,928 - 143,362,971 (-)EnsemblpanPan2panpan1.1
EEF1D
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11337,240,405 - 37,247,603 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1337,239,150 - 37,255,958 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1337,196,984 - 37,210,347 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01337,712,322 - 37,725,681 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1337,711,489 - 37,726,196 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11337,386,658 - 37,399,976 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01337,503,589 - 37,516,922 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01337,984,799 - 37,998,156 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Eef1d
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244053031,112,915 - 1,127,546 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364708,538,821 - 8,553,970 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364708,538,899 - 8,553,645 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EEF1D
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4969,527 - 983,270 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.14969,532 - 982,250 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.241,038,509 - 1,047,368 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EEF1D
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18137,800,115 - 137,818,264 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl8137,799,428 - 137,813,120 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660392,075,527 - 2,093,549 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Eef1d
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473513,154,327 - 13,173,477 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473513,148,640 - 13,165,259 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Eef1d
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11248,214,291 - 248,228,863 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Eef1d
177 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:148
Count of miRNA genes:92
Interacting mature miRNAs:99
Transcripts:ENSRNOT00000011260, ENSRNOT00000029456
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)792388565119280177Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)782111245123048330Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7104186212135371468Rat
1358361Sradr5Stress Responsive Adrenal Weight QTL 55.55adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)731770293110435881Rat
70159Bp61Blood pressure QTL 610.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)773618702118618702Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)793302009131686183Rat
1357338Stl17Serum triglyceride level QTL 173.23blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)771621154114982716Rat
61397Bw17Body weight QTL 176.3body mass (VT:0001259)body weight (CMO:0000012)795485047137014596Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)746307490127866166Rat
634322Bw12Body weight QTL 120body mass (VT:0001259)body weight (CMO:0000012)785043242130043242Rat
70173Niddm19Non-insulin dependent diabetes mellitus QTL 194.330.00005blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)785497398130497398Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)792362341137014596Rat
1331723Bw25Body weight QTL 253.348body mass (VT:0001259)body weight (CMO:0000012)796700404111672180Rat
2317052Aia17Adjuvant induced arthritis QTL 172.13joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)783626689128626689Rat
631529Tls2T-lymphoma susceptibility QTL 200.001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)782111382132099989Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)798549867137014596Rat
7411607Foco15Food consumption QTL 150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)777807807122807807Rat
631201Panci1Pancreas inflammation QTL 100.001pancreas integrity trait (VT:0010560)percentage of study population displaying chronic pancreatitis at a point in time (CMO:0001214)773557047118557047Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)71509236116977875Rat
1331768Kidm10Kidney mass QTL 104.62096kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)782111245123048330Rat
2313102Bmd79Bone mineral density QTL 792.30.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)796700404118618702Rat
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)740540077123682549Rat
2316947Rf58Renal function QTL 587.8kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)749682832115766396Rat
10450862Kidm55Kidney mass QTL 554.9kidney mass (VT:0002707)kidney weight (CMO:0000081)772725037117725037Rat
61428Scl3Serum cholesterol level QTL 33.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)7100548246137014596Rat
1331746Kidm9Kidney mass QTL 93.934kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)782111245134948181Rat
7411654Foco25Food consumption QTL 259.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)777807807122807807Rat
10450856Livw4Liver weight QTL 43.8liver mass (VT:0003402)liver weight (CMO:0000092)772725037117725037Rat
2316955Stl24Serum triglyceride level QTL 247.1blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)749682832115766396Rat
10402855Bp379Blood pressure QTL 3790.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)778682549123682549Rat
2316952Pur22Proteinuria QTL 225.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)749682832115766396Rat
631540Bw9Body weight QTL 94.5body mass (VT:0001259)body weight (CMO:0000012)771621154119349044Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)771827901136544683Rat

Markers in Region
RH129024  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr87109,462,659 - 109,462,947 (+)Marker Load Pipeline
mRatBN7.27107,581,944 - 107,582,232 (+)MAPPERmRatBN7.2
Rnor_6.07116,928,279 - 116,928,566NCBIRnor6.0
Rnor_5.07116,820,246 - 116,821,137UniSTSRnor5.0
Rnor_5.07116,820,246 - 116,820,533UniSTSRnor5.0
RGSC_v3.47113,870,573 - 113,870,860UniSTSRGSC3.4
Celera7103,938,943 - 103,939,230UniSTS
RH 3.4 Map7781.2UniSTS
Cytogenetic Map7q34UniSTS
BF412712  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27107,589,828 - 107,590,017 (+)MAPPERmRatBN7.2
Rnor_6.07116,936,163 - 116,936,351NCBIRnor6.0
Rnor_5.07116,828,734 - 116,828,922UniSTSRnor5.0
RGSC_v3.47113,878,865 - 113,879,053UniSTSRGSC3.4
Celera7103,946,828 - 103,947,016UniSTS
RH 3.4 Map7785.5UniSTS
Cytogenetic Map7q34UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001013104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001440068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039078811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039078812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039078813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039078814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039078815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039078818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC126537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF145050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC079391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ225933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ227443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ233760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000029456   ⟹   ENSRNOP00000034828
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7107,581,930 - 107,591,888 (-)Ensembl
Rnor_6.0 Ensembl7116,928,265 - 116,936,674 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000087328   ⟹   ENSRNOP00000071183
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7107,603,549 - 107,608,789 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000094330   ⟹   ENSRNOP00000097149
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7109,462,646 - 109,468,484 (-)Ensembl
mRatBN7.2 Ensembl7107,581,930 - 107,587,769 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000098616   ⟹   ENSRNOP00000087171
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7109,462,646 - 109,471,268 (-)Ensembl
mRatBN7.2 Ensembl7107,581,931 - 107,596,628 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000106771   ⟹   ENSRNOP00000092090
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7109,462,646 - 109,471,268 (-)Ensembl
mRatBN7.2 Ensembl7107,581,933 - 107,596,394 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000110570   ⟹   ENSRNOP00000096307
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7109,462,646 - 109,477,250 (-)Ensembl
mRatBN7.2 Ensembl7107,581,930 - 107,596,626 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000111979   ⟹   ENSRNOP00000081329
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7109,462,646 - 109,477,427 (-)Ensembl
mRatBN7.2 Ensembl7107,581,930 - 107,596,405 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000112184   ⟹   ENSRNOP00000076544
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7109,462,646 - 109,489,531 (-)Ensembl
mRatBN7.2 Ensembl7107,581,930 - 107,608,799 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000117537   ⟹   ENSRNOP00000084037
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7107,581,931 - 107,591,888 (-)Ensembl
RefSeq Acc Id: NM_001013104   ⟹   NP_001013122
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,471,055 (-)NCBI
mRatBN7.27107,581,930 - 107,590,340 (-)NCBI
Rnor_6.07116,928,264 - 116,936,674 (-)NCBI
Rnor_5.07116,820,231 - 116,835,552 (-)NCBI
RGSC_v3.47113,870,558 - 113,879,376 (-)RGD
Celera7103,938,928 - 103,947,339 (-)RGD
Sequence:
RefSeq Acc Id: XM_008765551   ⟹   XP_008763773
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,124 (-)NCBI
mRatBN7.27107,581,930 - 107,596,428 (-)NCBI
Rnor_6.07116,928,264 - 116,942,749 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008765557   ⟹   XP_008763779
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,140 (-)NCBI
mRatBN7.27107,581,930 - 107,596,452 (-)NCBI
Rnor_6.07116,928,264 - 116,942,759 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008765559   ⟹   XP_008763781
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,138 (-)NCBI
mRatBN7.27107,581,930 - 107,596,415 (-)NCBI
Rnor_6.07116,928,264 - 116,942,749 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008765561   ⟹   XP_008763783
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,140 (-)NCBI
mRatBN7.27107,581,930 - 107,596,452 (-)NCBI
Rnor_6.07116,928,264 - 116,942,759 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017594765   ⟹   XP_017450254
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,143 (-)NCBI
mRatBN7.27107,581,930 - 107,596,452 (-)NCBI
Rnor_6.07116,928,264 - 116,942,759 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017594767   ⟹   XP_017450256
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,120 (-)NCBI
mRatBN7.27107,581,930 - 107,596,414 (-)NCBI
Rnor_6.07116,928,264 - 116,942,743 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039078811   ⟹   XP_038934739
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,136 (-)NCBI
mRatBN7.27107,581,930 - 107,596,411 (-)NCBI
RefSeq Acc Id: XM_039078812   ⟹   XP_038934740
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,113 (-)NCBI
mRatBN7.27107,581,930 - 107,596,411 (-)NCBI
RefSeq Acc Id: XM_039078813   ⟹   XP_038934741
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,116 (-)NCBI
mRatBN7.27107,581,930 - 107,596,411 (-)NCBI
RefSeq Acc Id: XM_039078814   ⟹   XP_038934742
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,114 (-)NCBI
mRatBN7.27107,581,930 - 107,596,428 (-)NCBI
RefSeq Acc Id: XM_039078815   ⟹   XP_038934743
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,142 (-)NCBI
mRatBN7.27107,581,930 - 107,596,452 (-)NCBI
RefSeq Acc Id: XM_039078818   ⟹   XP_038934746
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,116 (-)NCBI
mRatBN7.27107,581,930 - 107,596,414 (-)NCBI
RefSeq Acc Id: XM_063263280   ⟹   XP_063119350
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,472,547 (-)NCBI
RefSeq Acc Id: XM_063263281   ⟹   XP_063119351
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,472,608 (-)NCBI
RefSeq Acc Id: XM_063263282   ⟹   XP_063119352
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,122 (-)NCBI
RefSeq Acc Id: XM_063263283   ⟹   XP_063119353
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,122 (-)NCBI
RefSeq Acc Id: XM_063263284   ⟹   XP_063119354
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,472,547 (-)NCBI
RefSeq Acc Id: XM_063263285   ⟹   XP_063119355
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,119 (-)NCBI
RefSeq Acc Id: XM_063263286   ⟹   XP_063119356
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,472,608 (-)NCBI
RefSeq Acc Id: XM_063263287   ⟹   XP_063119357
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,119 (-)NCBI
RefSeq Acc Id: XM_063263288   ⟹   XP_063119358
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,122 (-)NCBI
RefSeq Acc Id: XM_063263290   ⟹   XP_063119360
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,121 (-)NCBI
RefSeq Acc Id: XM_063263291   ⟹   XP_063119361
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,472,608 (-)NCBI
RefSeq Acc Id: XM_063263292   ⟹   XP_063119362
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,472,547 (-)NCBI
RefSeq Acc Id: XM_063263293   ⟹   XP_063119363
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,472,608 (-)NCBI
RefSeq Acc Id: XM_063263294   ⟹   XP_063119364
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,472,608 (-)NCBI
RefSeq Acc Id: XM_063263295   ⟹   XP_063119365
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,472,608 (-)NCBI
RefSeq Acc Id: XM_063263296   ⟹   XP_063119366
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,327 (-)NCBI
RefSeq Acc Id: XM_063263298   ⟹   XP_063119368
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,472,608 (-)NCBI
RefSeq Acc Id: XM_063263299   ⟹   XP_063119369
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,472,547 (-)NCBI
RefSeq Acc Id: XM_063263300   ⟹   XP_063119370
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,147 (-)NCBI
RefSeq Acc Id: XM_063263301   ⟹   XP_063119371
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,125 (-)NCBI
RefSeq Acc Id: XM_063263302   ⟹   XP_063119372
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,389 (-)NCBI
RefSeq Acc Id: XM_063263303   ⟹   XP_063119373
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,477,324 (-)NCBI
RefSeq Acc Id: XM_063263305   ⟹   XP_063119375
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87109,462,645 - 109,478,021 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001013122 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426980 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426981 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426982 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426983 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426984 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426985 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426986 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426987 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426988 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426989 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426990 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426991 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426992 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426993 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426994 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426995 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426996 (Get FASTA)   NCBI Sequence Viewer  
  NP_001426997 (Get FASTA)   NCBI Sequence Viewer  
  XP_008763773 (Get FASTA)   NCBI Sequence Viewer  
  XP_008763779 (Get FASTA)   NCBI Sequence Viewer  
  XP_008763781 (Get FASTA)   NCBI Sequence Viewer  
  XP_008763783 (Get FASTA)   NCBI Sequence Viewer  
  XP_017450254 (Get FASTA)   NCBI Sequence Viewer  
  XP_017450256 (Get FASTA)   NCBI Sequence Viewer  
  XP_038934739 (Get FASTA)   NCBI Sequence Viewer  
  XP_038934740 (Get FASTA)   NCBI Sequence Viewer  
  XP_038934741 (Get FASTA)   NCBI Sequence Viewer  
  XP_038934742 (Get FASTA)   NCBI Sequence Viewer  
  XP_038934743 (Get FASTA)   NCBI Sequence Viewer  
  XP_038934746 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119350 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119351 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119352 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119353 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119354 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119355 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119356 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119357 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119358 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119360 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119361 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119362 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119363 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119364 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119365 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119366 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119368 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119369 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119370 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119371 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119372 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119373 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119375 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAD33950 (Get FASTA)   NCBI Sequence Viewer  
  AAH79391 (Get FASTA)   NCBI Sequence Viewer  
  EDM16037 (Get FASTA)   NCBI Sequence Viewer  
  EDM16038 (Get FASTA)   NCBI Sequence Viewer  
  EDM16039 (Get FASTA)   NCBI Sequence Viewer  
  EDM16040 (Get FASTA)   NCBI Sequence Viewer  
  EDM16041 (Get FASTA)   NCBI Sequence Viewer  
  EDM16042 (Get FASTA)   NCBI Sequence Viewer  
  EDM16043 (Get FASTA)   NCBI Sequence Viewer  
  EDM16044 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000081329
  ENSRNOP00000087171
  ENSRNOP00000092090
  ENSRNOP00000096307
GenBank Protein Q68FR9 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001013122   ⟸   NM_001013104
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008763783   ⟸   XM_008765561
- Peptide Label: isoform X17
- Sequence:
RefSeq Acc Id: XP_008763779   ⟸   XM_008765557
- Peptide Label: isoform X15
- Sequence:
RefSeq Acc Id: XP_008763773   ⟸   XM_008765551
- Peptide Label: isoform X7
- UniProtKB: A0A8I5ZWY7 (UniProtKB/TrEMBL),   A0A8L2QI22 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008763781   ⟸   XM_008765559
- Peptide Label: isoform X15
- UniProtKB: Q68FR9 (UniProtKB/Swiss-Prot),   A0A8I6GFR4 (UniProtKB/TrEMBL),   A6HS33 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017450254   ⟸   XM_017594765
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_017450256   ⟸   XM_017594767
- Peptide Label: isoform X14
- Sequence:
Ensembl Acc Id: ENSRNOP00000034828   ⟸   ENSRNOT00000029456
RefSeq Acc Id: XP_038934743   ⟸   XM_039078815
- Peptide Label: isoform X16
RefSeq Acc Id: XP_038934742   ⟸   XM_039078814
- Peptide Label: isoform X12
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038934746   ⟸   XM_039078818
- Peptide Label: isoform X17
RefSeq Acc Id: XP_038934740   ⟸   XM_039078812
- Peptide Label: isoform X10
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038934741   ⟸   XM_039078813
- Peptide Label: isoform X11
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038934739   ⟸   XM_039078811
- Peptide Label: isoform X9
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000071183   ⟸   ENSRNOT00000087328
Ensembl Acc Id: ENSRNOP00000081329   ⟸   ENSRNOT00000111979
Ensembl Acc Id: ENSRNOP00000076544   ⟸   ENSRNOT00000112184
Ensembl Acc Id: ENSRNOP00000084037   ⟸   ENSRNOT00000117537
Ensembl Acc Id: ENSRNOP00000087171   ⟸   ENSRNOT00000098616
Ensembl Acc Id: ENSRNOP00000096307   ⟸   ENSRNOT00000110570
Ensembl Acc Id: ENSRNOP00000092090   ⟸   ENSRNOT00000106771
Ensembl Acc Id: ENSRNOP00000097149   ⟸   ENSRNOT00000094330
RefSeq Acc Id: XP_063119375   ⟸   XM_063263305
- Peptide Label: isoform X13
- UniProtKB: A0A8I6GFR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119372   ⟸   XM_063263302
- Peptide Label: isoform X13
- UniProtKB: A0A8I6GFR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119366   ⟸   XM_063263296
- Peptide Label: isoform X9
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119373   ⟸   XM_063263303
- Peptide Label: isoform X13
- UniProtKB: A0A8I6GFR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119370   ⟸   XM_063263300
- Peptide Label: isoform X13
- UniProtKB: A0A8I6GFR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119371   ⟸   XM_063263301
- Peptide Label: isoform X13
- UniProtKB: A0A8I6GFR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119353   ⟸   XM_063263283
- Peptide Label: isoform X2
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119358   ⟸   XM_063263288
- Peptide Label: isoform X5
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119352   ⟸   XM_063263282
- Peptide Label: isoform X1
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119360   ⟸   XM_063263290
- Peptide Label: isoform X6
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119357   ⟸   XM_063263287
- Peptide Label: isoform X4
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119355   ⟸   XM_063263285
- Peptide Label: isoform X3
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119368   ⟸   XM_063263298
- Peptide Label: isoform X10
RefSeq Acc Id: XP_063119363   ⟸   XM_063263293
- Peptide Label: isoform X8
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119364   ⟸   XM_063263294
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063119356   ⟸   XM_063263286
- Peptide Label: isoform X3
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119361   ⟸   XM_063263291
- Peptide Label: isoform X7
RefSeq Acc Id: XP_063119351   ⟸   XM_063263281
- Peptide Label: isoform X1
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119365   ⟸   XM_063263295
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063119369   ⟸   XM_063263299
- Peptide Label: isoform X10
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119354   ⟸   XM_063263284
- Peptide Label: isoform X2
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119362   ⟸   XM_063263292
- Peptide Label: isoform X7
- UniProtKB: A0A8I5ZWY7 (UniProtKB/TrEMBL),   A0A8L2QI22 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119350   ⟸   XM_063263280
- Peptide Label: isoform X1
- UniProtKB: A0A8L2QI22 (UniProtKB/TrEMBL)
Protein Domains
Elongation factor 1 beta central acidic region   Translation elongation factor EF1B beta/delta

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q68FR9-F1-model_v2 AlphaFold Q68FR9 1-281 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695396
Promoter ID:EPDNEW_R5918
Type:single initiation site
Name:Eef1d_1
Description:eukaryotic translation elongation factor 1 delta
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.07116,936,686 - 116,936,746EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621174 AgrOrtholog
BioCyc Gene G2FUF-32976 BioCyc
Ensembl Genes ENSRNOG00000021638 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000098616 ENTREZGENE
  ENSRNOT00000106771 ENTREZGENE
  ENSRNOT00000110570 ENTREZGENE
  ENSRNOT00000111979 ENTREZGENE
Gene3D-CATH 3.30.70.60 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7111852 IMAGE-MGC_LOAD
InterPro eEF-1beta-like_sf UniProtKB/Swiss-Prot
  EF-1_beta_acid_region_euk UniProtKB/Swiss-Prot
  EF1B_bsu/dsu UniProtKB/Swiss-Prot
  EF1B_bsu/dsu_GNE UniProtKB/Swiss-Prot
  Transl_elong_EF1B/ribosomal_S6 UniProtKB/Swiss-Prot
  Transl_elong_EF1B_B/D_CS UniProtKB/Swiss-Prot
KEGG Report rno:300033 UniProtKB/Swiss-Prot
MGC_CLONE MGC:94908 IMAGE-MGC_LOAD
NCBI Gene Eef1d ENTREZGENE
PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER UniProtKB/Swiss-Prot
  ELONGATION FACTOR 1-DELTA UniProtKB/Swiss-Prot
Pfam EF-1_beta_acid UniProtKB/Swiss-Prot
  EF1_GNE UniProtKB/Swiss-Prot
PhenoGen Eef1d PhenoGen
PROSITE EF1BD_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000021638 RatGTEx
SMART EF-1_beta_acid UniProtKB/Swiss-Prot
  EF1_GNE UniProtKB/Swiss-Prot
Superfamily-SCOP SSF54984 UniProtKB/Swiss-Prot
UniProt A0A8I5Y6S6_RAT UniProtKB/TrEMBL
  A0A8I5ZUU1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZWY7 ENTREZGENE
  A0A8I6AQM3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ARB5_RAT UniProtKB/TrEMBL
  A0A8I6GFR4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GJH3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8L2QI22 ENTREZGENE
  A6HS28_RAT UniProtKB/TrEMBL
  A6HS29 ENTREZGENE, UniProtKB/TrEMBL
  A6HS30 ENTREZGENE, UniProtKB/TrEMBL
  A6HS31_RAT UniProtKB/TrEMBL
  A6HS33 ENTREZGENE, UniProtKB/TrEMBL
  A6HS34_RAT UniProtKB/TrEMBL
  A6HS35_RAT UniProtKB/TrEMBL
  EF1D_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-27 Eef1d  eukaryotic translation elongation factor 1 delta  Eef1d  eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-04-14 Eef1d  eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)  Eef1d_predicted  eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) (predicted)  Data merged from RGD:1311814 737654 APPROVED
2005-01-20 Eef1d  eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)    translation elongation factor 1-delta subunit  Name updated 1299863 APPROVED
2005-01-12 Eef1d_predicted  eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) (predicted)      Symbol and Name status set to approved 70820 APPROVED
2002-08-07 Eef1d  translation elongation factor 1-delta subunit      Symbol and Name status set to provisional 70820 PROVISIONAL