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Gene: Gorasp1 (golgi reassembly stacking protein 1) Rattus norvegicus

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Symbol:

Gorasp1

Name:

golgi reassembly stacking protein 1

RGD ID:

621122

Description:

Predicted to enable metal ion binding activity. Involved in Golgi organization and negative regulation of dendrite morphogenesis. Predicted to be located in Golgi membrane. Predicted to be active in Golgi apparatus. Orthologous to human GORASP1 (golgi reassembly stacking protein 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; ammonium chloride.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

golgi peripheral membrane protein p65; Golgi reassembly-stacking protein 1; golgi reassembly-stacking protein of 65 kDa; GRASP65

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GORASP1 (golgi reassembly stacking protein 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther
Mus musculus (house mouse):	Gorasp1 (golgi reassembly stacking protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Gorasp1 (golgi reassembly stacking protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	GORASP1 (golgi reassembly stacking protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	GORASP1 (golgi reassembly stacking protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Gorasp1 (golgi reassembly stacking protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GORASP1 (golgi reassembly stacking protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	GORASP1 (golgi reassembly stacking protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Gorasp1 (golgi reassembly stacking protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Gorasp1 (golgi reassembly stacking protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Gorasp1 (golgi reassembly stacking protein 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	GORASP1 (golgi reassembly stacking protein 1)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	gorasp1b (golgi reassembly stacking protein 1b)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	gorasp1b (golgi reassembly stacking protein 1b)	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	gorasp1a (golgi reassembly stacking protein 1a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	GRH1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	GRH1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Grasp65	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	Y42H9AR.1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	Y42H9AR.1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	gorasp1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	gorasp1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	128,532,933 - 128,544,686 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	128,532,934 - 128,544,636 (-)	Ensembl				GRCr8
mRatBN7.2	8	119,655,267 - 119,667,022 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	119,655,268 - 119,666,972 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	125,236,740 - 125,248,426 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	123,435,787 - 123,447,473 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	121,268,521 - 121,280,226 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	128,610,290 - 128,622,337 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	128,610,291 - 128,622,337 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	127,811,973 - 127,824,020 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	124,883,445 - 124,895,149 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	118,802,215 - 118,813,913 (-)	NCBI		Celera
RGSC_v3.1	8	124,903,186 - 124,914,863 (-)	NCBI
Cytogenetic Map	8	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

aflatoxin B1 (ISO)

ammonium chloride (EXP)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP,ISO)

cadmium dichloride (ISO)

caffeine (ISO)

CGP 52608 (ISO)

chloroacetaldehyde (ISO)

choline (ISO)

cisplatin (ISO)

coumarin (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP,ISO)

dioxygen (ISO)

diuron (EXP)

doxorubicin (ISO)

elemental selenium (ISO)

endosulfan (EXP)

epoxiconazole (ISO)

ethanol (ISO)

fenthion (ISO)

folic acid (ISO)

FR900359 (ISO)

gentamycin (EXP)

indometacin (ISO)

inulin (ISO)

L-methionine (ISO)

mercury atom (ISO)

mercury(0) (ISO)

methidathion (ISO)

paracetamol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

pregnenolone 16alpha-carbonitrile (ISO)

selenium atom (ISO)

sodium arsenite (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

establishment of protein localization to plasma membrane (IEA,ISO,ISS)

Golgi organization (IBA,IDA,IEA,IMP,ISO)

Golgi ribbon formation (IEA,ISO)

negative regulation of dendrite morphogenesis (IEA,IMP,ISO)

protein N-linked glycosylation (ISO)

protein transport (IEA)

Cellular Component

Golgi apparatus (IBA,IEA,ISO,ISS)

Golgi membrane (IEA,TAS)

Molecular Function

metal ion binding (IEA)

protein binding (IPI,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Golgi matrix proteins interact with p24 cargo receptors and aid their efficient retention in the Golgi apparatus.	Barr FA, etal., J Cell Biol. 2001 Dec 10;155(6):885-91. Epub 2001 Dec 10.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	An OBSL1-Cul7Fbxw8 ubiquitin ligase signaling mechanism regulates Golgi morphology and dendrite patterning.	Litterman N, etal., PLoS Biol. 2011 May;9(5):e1001060. doi: 10.1371/journal.pbio.1001060. Epub 2011 May 10.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
6.	GOA pipeline	RGD automated data pipeline
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
8.	A GRASP55-rab2 effector complex linking Golgi structure to membrane traffic.	Short B, etal., J Cell Biol. 2001 Dec 10;155(6):877-83. Epub 2001 Dec 10.
9.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
10.	A direct role for GRASP65 as a mitotically regulated Golgi stacking factor.	Wang Y, etal., EMBO J 2003 Jul 1;22(13):3279-90.

Additional References at PubMed

PMID:9346242	PMID:9628863	PMID:11815631	PMID:12015985	PMID:15678101	PMID:15767678	PMID:15834132	PMID:16396499	PMID:18045989	PMID:18762583	PMID:21884936	PMID:22841714
PMID:23940043	PMID:24367100	PMID:24795147

Genomics

Comparative Map Data

Gorasp1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	128,532,933 - 128,544,686 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	128,532,934 - 128,544,636 (-)	Ensembl				GRCr8
mRatBN7.2	8	119,655,267 - 119,667,022 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	119,655,268 - 119,666,972 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	125,236,740 - 125,248,426 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	123,435,787 - 123,447,473 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	121,268,521 - 121,280,226 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	128,610,290 - 128,622,337 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	128,610,291 - 128,622,337 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	127,811,973 - 127,824,020 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	124,883,445 - 124,895,149 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	118,802,215 - 118,813,913 (-)	NCBI		Celera
RGSC_v3.1	8	124,903,186 - 124,914,863 (-)	NCBI
Cytogenetic Map	8	q32	NCBI

GORASP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	39,096,599 - 39,107,627 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	39,095,222 - 39,108,369 (-)	Ensembl			hg38	GRCh38
GRCh37	3	39,138,090 - 39,149,118 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	39,113,095 - 39,124,134 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	3	39,113,094 - 39,124,134	NCBI
Celera	3	39,078,594 - 39,089,634 (-)	NCBI		Celera
Cytogenetic Map	3	p22.2	NCBI
HuRef	3	39,180,011 - 39,191,775 (-)	NCBI		HuRef
CHM1_1	3	39,089,163 - 39,100,931 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	39,108,763 - 39,119,791 (-)	NCBI		T2T-CHM13v2.0

Gorasp1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	119,754,739 - 119,766,624 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	119,754,323 - 119,766,631 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	119,925,673 - 119,937,558 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	119,925,257 - 119,937,565 (-)	Ensembl			mm10	GRCm38
MGSCv37	9	119,834,791 - 119,846,676 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	119,774,371 - 119,786,256 (-)	NCBI		MGSCv36	mm8
Celera	9	120,392,893 - 120,404,786 (-)	NCBI		Celera
Cytogenetic Map	9	F4	NCBI
cM Map	9	71.33	NCBI

Gorasp1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955427	24,862,346 - 24,870,651 (+)	Ensembl
ChiLan1.0	NW_004955427	24,862,253 - 24,873,710 (+)	NCBI	ChiLan1.0	ChiLan1.0

GORASP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	39,048,191 - 39,059,226 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	39,052,953 - 39,063,985 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	38,992,863 - 39,004,586 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	39,273,272 - 39,285,008 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	39,273,272 - 39,285,008 (-)	Ensembl			panPan2	panpan1.1

GORASP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	8,766,243 - 8,776,278 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	8,766,243 - 8,776,288 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	8,805,904 - 8,816,000 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	9,054,839 - 9,064,948 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	9,053,432 - 9,064,954 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	8,868,535 - 8,878,620 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	9,010,792 - 9,020,892 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	9,004,214 - 9,014,311 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Gorasp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	195,213,155 - 195,223,471 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936473	28,353,485 - 28,361,977 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936473	28,351,669 - 28,362,062 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GORASP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	23,786,248 - 23,797,487 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	13	23,786,245 - 23,797,508 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	26,045,884 - 26,057,044 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GORASP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	308,445 - 319,309 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	308,649 - 317,728 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666063	9,035,490 - 9,046,715 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gorasp1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624731	1,873,466 - 1,883,462 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624731	1,873,474 - 1,884,712 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Gorasp1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	111,165,458 - 111,176,982 (-)	NCBI		Rrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	163
Count of miRNA genes:	109
Interacting mature miRNAs:	132
Transcripts:	ENSRNOT00000024408
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
738011	Anxrr9	Anxiety related response QTL 9	6.1		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	8	102413464	132782436	Rat
724539	Cm19	Cardiac mass QTL 19	2.6		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	8	103375781	129871912	Rat
2303171	Bp331	Blood pressure QTL 331	5.57	0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	105462581	132782436	Rat
634332	Pia18	Pristane induced arthritis QTL 18	4		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	8	84192326	132782436	Rat
2300181	Bmd55	Bone mineral density QTL 55	5.7	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	85348065	130348065	Rat
1300171	Bp184	Blood pressure QTL 184	3.66		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	8	79394435	132782436	Rat
61437	Cia6	Collagen induced arthritis QTL 6			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	8	91340911	131690273	Rat
10450865	Bw175	Body weight QTL 175	4.1		total fat pad mass (VT:0015008)	adipose tissue molecular composition measurement (CMO:0000484)	8	84192326	129192326	Rat

Markers in Region

RH127721

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	119,655,296 - 119,655,480 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	128,610,320 - 128,610,503	NCBI	Rnor6.0
Rnor_5.0	8	127,812,003 - 127,812,186	UniSTS	Rnor5.0
RGSC_v3.4	8	124,883,475 - 124,883,658	UniSTS	RGSC3.4
Celera	8	118,802,245 - 118,802,428	UniSTS
RH 3.4 Map	8	1285.99	UniSTS
Cytogenetic Map	8	q32	UniSTS

MARC_16103-16104:1018028206:1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	8	128,538,974 - 128,539,537 (+)	Marker Load Pipeline
mRatBN7.2	8	119,661,308 - 119,661,871 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	128,616,332 - 128,616,894	NCBI	Rnor6.0
Rnor_5.0	8	127,818,015 - 127,818,577	UniSTS	Rnor5.0
RGSC_v3.4	8	124,889,487 - 124,890,049	UniSTS	RGSC3.4
Celera	8	118,808,256 - 118,808,818	UniSTS
Cytogenetic Map	8	q32	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	160	91	90	59	90	59	6	354	190	11	139	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_019385	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005487911	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF015264	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC081809	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC126085	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC161850	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000024408 ⟹ ENSRNOP00000024408

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	128,532,934 - 128,544,636 (-)	Ensembl
mRatBN7.2 Ensembl	8	119,655,268 - 119,666,972 (-)	Ensembl
Rnor_6.0 Ensembl	8	128,610,291 - 128,622,337 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000084950 ⟹ ENSRNOP00000069907

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	128,532,934 - 128,544,636 (-)	Ensembl
mRatBN7.2 Ensembl	8	119,656,373 - 119,666,972 (-)	Ensembl
Rnor_6.0 Ensembl	8	128,610,295 - 128,622,314 (-)	Ensembl

RefSeq Acc Id:

NM_019385 ⟹ NP_062258

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	128,532,933 - 128,544,636 (-)	NCBI
mRatBN7.2	8	119,655,267 - 119,666,972 (-)	NCBI
Rnor_6.0	8	128,610,290 - 128,622,337 (-)	NCBI
Rnor_5.0	8	127,811,973 - 127,824,020 (-)	NCBI
RGSC_v3.4	8	124,883,445 - 124,895,149 (-)	RGD
Celera	8	118,802,215 - 118,813,913 (-)	RGD

Sequence:

show sequence

AGGCCACGCAGCAGAGGGAGAGGACGGCCATGGGGCTAGGGGCAAGCAGCGAGCAGCCGGCGGG
CGGCGAGGGCTTCCATCTGCACGGGGTACAAGAGAACTCGCCAGCCCAGCAGGCGGGCCTGGAG
CCCTACTTTGACTTCATCATCACCATCGGGCACTCAAGGCTGAACAAGGAGAATGACACGCTGA
AGGCACTGCTGAAGGCTAATGTGGAGAAGCCGGTGAAGCTGGAGGTGTTCAACATGAAGACCAT
GAGGGTGCGAGAGGTGGAGGTGGTGCCCAGCAACATGTGGGGCGGCCAGGGCCTGCTGGGAGCT
AGCGTGCGCTTCTGCAGCTTCCGCAGGGCCAGCGAGCACGTGTGGCATGTGCTGGATGTGGAGC
CCTCTTCACCCGCTGCCTTGGCCGGCCTGCGCCCTTACACAGACTACATTGTTGGCTCTGACCA
GATCCTCCAGGAGTCGGAAGACTTCTTCACTCTCATTGAGTCCCATGAGGGAAAGCCCCTGAAG
CTGATGGTTTATAACTCTGAATCCGACTCCTGCCGGGAGGTGACTGTGACCCCCAATGCAGCCT
GGGGTGGAGAGGGCAGTCTGGGGTGTGGTATTGGTTACGGGTACCTGCACCGGATCCCAACGCA
GCCCTCCAGCCAGTACAAGAAGCCACCCAGTGCCTCATCACCTGGCACTCCAGCTAAGACCCCA
CAACCTAATGCCTTTCCTCTTGGTGCCCCACCACCTTGGCCCATCCCTCAGGACTCTTCTGGCC
CAGAGCTGGGTTCCAGGCAGAGTGACTACATGGAGGCCTTACCACAGGTCCCTGGTGGCTTTAT
GGAGGAGCAGCTCCCTGGGCCTGGGAGTCCTGGCCATGGCACTGCTGACTATGGGGGATGCCTA
CATTCCATGGAGATCCCGCTTCAGCCTCCACCTCCAGTCCAGCGGGTCATGGACCCAGGCTTCC
TGGATGTGTCAGGCATGTCCCTCCTGGACAGCAGCAATACAAGTGTGTGCCCCAGCTTGTCATC
TTCCTCATTGCTGACCCCTACAGCTGTTTCAGCCTTAGGACCAGAGGACATTGGTTCCAGCAGC
AGTTCTCATGAGCGGGGTGGTGAGGCCACGTGGTCAGGGTCAGAGTTCGAGATCTCCTTCCCCG
ACAGTCCAGGCTCCCAGGCCCAGGTGGACCACCTGCCCCGGCTGACTCTCCCTGATGGCCTCAC
GTCTGCAGCTTCACCAGAAGAAGGGCTGTCTGCAGAACTGCTGGAAGCACAGACCGAGGAACCA
GCAGACACAGCCAGCCTGGATTGCATGGCAGAGACTGAGGGGCCAGCCGGCCAAGTCCAGGCTG
CCCCAGATCCAGAGCCTGGGTTGTGAGAAGGCCCCTGGTGACATTTGGTGTTCCTTAGCTGTGT
AGCTCTCTAGGCTGCAGCCTCTAACGAGGCATGGGCTTTGCTAGAGTTCACATGTAGTCCTGGA
TTGAAAGGAACAGAACACTGGAGCAATGTCCGGCTTCTATAGAGGCAGGAGATGGATCTAGATG
TGTCTGTGAAGCACTGGCACCTTCCCGGGAGGGAGAGGCTGCAGGCCCGACACAATGTCCATAT
GAAGATGGGGTGGGGGACAAGAGGCTGTGTCCACAAGCGGCCACACTGGTACTGAGGAGCACCC
CGAATCCCAATGCCCTTCCTCATTCTAATCCTTACACTGGATGAGAGAGGCAGTATACTTGGCC
ACTTGATTTCTAGGATGGAAGATTCTGGGCCCTTCAGAGGGACCTGCCTCTGCTAGCTGTACAC
TAGCCTCAGGGGAGGTGGAAGGGAGCAGACACTCCAGTTCTTCTCTCCTGTGATCTCTCAGCCC
TCCCTCACGTGCGGACAGCAGGCTCCGAGTACACAAGGTACAGCTGGTTCTGATGGTAAACAGG
TCAGGCTTTGCTTACCATCAACCCCCCCTACTCAGCCCTTCTCGTCTGGACTTCTGGGTAAAGC
CCCCTCCCATCTGTCCTCAGTGTACGGGAAAGGGGCCTTGAGAGGCTCAGGCTCTGAGAGGACG
TCTGTGCTGCTGCCTTACTGCAGATGGCACCAGCCATGTCTTCTGCAGCTCCAGTCCTGTGTCC
TTGCTAATCGTCTCCCACCTCCACAGACCATGGAGCTGCCTAGGTTGTTAAGCCAAGGACTCTG
TTTAGGAAGCACAGGGCAAGTAGTACAGTGGGCGGACACGACCCCATGCACTAGGAATACATTT
ATAGCCGGGCCCGTGAGGCCCCCAGAGCCACTAAGGCCTGCAGTTGTACAGCATGGGTTACCAC
AGGGCTGCTCTGTGGTGAGCACCCTGACCCCCAGCTGTCCTTGCTGGAGGGGTCTGCTCCCTGG
GACACTGTAAGTGGGGTGAGATGGATGCTGATGCTGTTTCAAGAGTGAACCCCAGATGTTTCTT
TCCCTGTAATCTGCTGTGGGAAGTGACAAGTGACCGAATAAACAAGTCCAGCACACTGAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XR_005487911

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	128,535,037 - 128,544,686 (-)	NCBI
mRatBN7.2	8	119,657,371 - 119,667,022 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_062258	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAB81355	(Get FASTA)	NCBI Sequence Viewer
	AAI26086	(Get FASTA)	NCBI Sequence Viewer
	AAI61850	(Get FASTA)	NCBI Sequence Viewer
	EDL76895	(Get FASTA)	NCBI Sequence Viewer
	EDL76896	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000024408
GenBank Protein	O35254	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_062258 ⟸ NM_019385

- UniProtKB:

O35254 (UniProtKB/Swiss-Prot), B1WBR1 (UniProtKB/TrEMBL), F7ERK9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGLGASSEQPAGGEGFHLHGVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTLKALLKANVEK
PVKLEVFNMKTMRVREVEVVPSNMWGGQGLLGASVRFCSFRRASEHVWHVLDVEPSSPAALAGL
RPYTDYIVGSDQILQESEDFFTLIESHEGKPLKLMVYNSESDSCREVTVTPNAAWGGEGSLGCG
IGYGYLHRIPTQPSSQYKKPPSASSPGTPAKTPQPNAFPLGAPPPWPIPQDSSGPELGSRQSDY
MEALPQVPGGFMEEQLPGPGSPGHGTADYGGCLHSMEIPLQPPPPVQRVMDPGFLDVSGMSLLD
SSNTSVCPSLSSSSLLTPTAVSALGPEDIGSSSSSHERGGEATWSGSEFEISFPDSPGSQAQVD
HLPRLTLPDGLTSAASPEEGLSAELLEAQTEEPADTASLDCMAETEGPAGQVQAAPDPEPGL

hide sequence

Ensembl Acc Id:

ENSRNOP00000069907 ⟸ ENSRNOT00000084950

Ensembl Acc Id:

ENSRNOP00000024408 ⟸ ENSRNOT00000024408

Protein Domains

PDZ GRASP-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-O35254-F1-model_v2	AlphaFold	O35254	1-451	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696378

Promoter ID:

EPDNEW_R6901

Type:

initiation region

Name:

Gorasp1_1

Description:

golgi reassembly stacking protein 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	8	128,622,318 - 128,622,378	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621122	AgrOrtholog
BioCyc Gene	G2FUF-28776	BioCyc
Ensembl Genes	ENSRNOG00000018047	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000024408	ENTREZGENE
Gene3D-CATH	2.30.42.10	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7112328	IMAGE-MGC_LOAD
	IMAGE:8369057	IMAGE-MGC_LOAD
InterPro	GRASP55/65_PDZ	UniProtKB/Swiss-Prot
	GRASP55_65	UniProtKB/Swiss-Prot
	PDZ_sf	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:187373	IMAGE-MGC_LOAD
	MGC:93484	IMAGE-MGC_LOAD
NCBI Gene	56082	ENTREZGENE
PANTHER	GOLGI REASSEMBLY-STACKING PROTEIN 1	UniProtKB/Swiss-Prot
	PTHR12893	UniProtKB/Swiss-Prot
Pfam	GRASP55_65	UniProtKB/Swiss-Prot
PhenoGen	Gorasp1	PhenoGen
PROSITE	PDZ_GRASP	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000018047	RatGTEx
Superfamily-SCOP	SSF50156	UniProtKB/Swiss-Prot
UniProt	A0A0G2JWJ7_RAT	UniProtKB/TrEMBL
	A0JN16_RAT	UniProtKB/TrEMBL
	B1WBR1	ENTREZGENE, UniProtKB/TrEMBL
	F7ERK9	ENTREZGENE, UniProtKB/TrEMBL
	GORS1_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-01-20	Gorasp1	golgi reassembly stacking protein 1	GRASP65	golgi peripheral membrane protein p65	Symbol and Name updated	1299863	APPROVED
2002-08-07	GRASP65	golgi peripheral membrane protein p65			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_regulation	phosphorylated by mitotic kinases cdc2-cyclin and polo-like kinases	708594

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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