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Gene: Mtdh (metadherin) Rattus norvegicus

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Symbol:

Mtdh

Name:

metadherin

RGD ID:

620992

Description:

Predicted to enable NF-kappaB binding activity; double-stranded RNA binding activity; and transcription coactivator activity. Involved in bicellular tight junction assembly. Located in several cellular components, including apical plasma membrane; bicellular tight junction; and intercellular canaliculus. Human ortholog(s) of this gene implicated in hepatocellular carcinoma. Orthologous to human MTDH (metadherin); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LYRIC; lysine-rich CEACAM1 co-isolated protein; metastasis adhesion protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MTDH (metadherin)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Mtdh (metadherin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Mtdh (metadherin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MTDH (metadherin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MTDH (metadherin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Mtdh (metadherin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MTDH (metadherin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MTDH (metadherin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Mtdh (metadherin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Mtdh (metadherin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	MTDH (metadherin)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Mtdh (metadherin)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	mtdha (metadherin a)	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	mtdha (metadherin a)	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	mtdhb (metadherin b)	Alliance	DIOPT (Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	mtdh	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	67,192,592 - 67,250,819 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	67,192,393 - 67,249,584 (+)	Ensembl				GRCr8
mRatBN7.2	7	65,306,464 - 65,365,647 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	65,306,400 - 65,364,413 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	67,196,680 - 67,252,148 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	69,398,395 - 69,453,863 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	69,258,737 - 69,313,219 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	72,771,018 - 72,830,599 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	72,772,440 - 72,827,908 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	73,209,610 - 73,233,540 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	7	72,938,130 - 72,997,298 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	69,527,182 - 69,583,015 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	62,413,649 - 62,469,018 (+)	NCBI		Celera
RGSC_v3.1	7	69,547,911 - 69,603,745 (+)	NCBI
Cytogenetic Map	7	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Breast Neoplasms (ISO)

Colorectal Neoplasms (ISO)

hepatocellular carcinoma (ISO)

Neoplasm Invasiveness (ISO)

Neoplasm Metastasis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,6-dinitrotoluene (EXP)

2-bromohexadecanoic acid (ISO)

2-methylcholine (ISO)

3,4-methylenedioxymethamphetamine (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

acetamide (EXP)

aflatoxin B1 (ISO)

aristolochic acid A (ISO)

benzatropine (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (ISO)

Bisphenol B (ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

cannabidiol (ISO)

carbamazepine (ISO)

chlorpyrifos (EXP)

cidofovir anhydrous (ISO)

cisplatin (ISO)

clodronic acid (ISO)

clozapine (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

coumarin (ISO)

crocidolite asbestos (ISO)

Cuprizon (ISO)

cyclosporin A (ISO)

deoxynivalenol (ISO)

dibenzo[a,l]pyrene (ISO)

dibutyl phthalate (ISO)

dioxygen (ISO)

disodium selenite (ISO)

dorsomorphin (ISO)

ethyl methanesulfonate (ISO)

flutamide (EXP)

folic acid (ISO)

formaldehyde (ISO)

FR900359 (ISO)

hexadecanoic acid (ISO)

hypochlorous acid (ISO)

ifosfamide (ISO)

ivermectin (ISO)

lead(0) (ISO)

metformin (EXP)

methyl methanesulfonate (ISO)

miconazole (ISO)

N-methyl-4-phenylpyridinium (ISO)

paracetamol (ISO)

phenobarbital (ISO)

phenylmercury acetate (ISO)

propiconazole (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sodium fluoride (ISO)

Soman (EXP)

sunitinib (ISO)

tetrachloromethane (ISO)

thapsigargin (EXP)

titanium dioxide (ISO)

Tributyltin oxide (ISO)

trichloroethene (EXP,ISO)

trichostatin A (ISO)

triphenyl phosphate (EXP,ISO)

Triptolide (ISO)

triptonide (ISO)

troglitazone (ISO)

tunicamycin (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

bicellular tight junction assembly (IEP)

lipopolysaccharide-mediated signaling pathway (IEA,ISO)

negative regulation of apoptotic process (IEA,ISO)

negative regulation of transcription by RNA polymerase II (IEA,ISO,ISS)

positive regulation of angiogenesis (IEA,ISO)

positive regulation of autophagy (IEA,ISO)

positive regulation of canonical NF-kappaB signal transduction (IEA,ISO)

positive regulation of DNA-templated transcription (IEA)

positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (IEA,ISO)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

apical plasma membrane (IDA)

bicellular tight junction (IDA,IEA)

cytoplasm (IEA,ISO)

endoplasmic reticulum (IEA,ISO,ISS)

endoplasmic reticulum membrane (IEA,ISO)

intercellular canaliculus (IDA)

nuclear body (IEA,ISO)

nuclear membrane (IEA)

nucleolus (IEA,ISO)

nucleus (IBA,IEA,ISO)

perinuclear region of cytoplasm (IDA,IEA,ISO,ISS)

Molecular Function

double-stranded RNA binding (IEA,ISO)

NF-kappaB binding (IBA,IEA,ISO,ISS)

protein binding (ISO)

RNA polymerase II-specific DNA-binding transcription factor binding (IEA,ISO)

transcription coactivator activity (IEA,ISO)

transcription coregulator activity (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Identification of a novel protein, LYRIC, localized to tight junctions of polarized epithelial cells.	Britt DE, etal., Exp Cell Res 2004 Oct 15;300(1):134-48.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:14980505	PMID:15927426	PMID:16396499	PMID:16452207	PMID:17704808	PMID:18316612	PMID:19433866	PMID:19648967	PMID:19740331	PMID:19940250	PMID:21127263	PMID:21266579
PMID:22658674	PMID:22681889	PMID:27351433	PMID:35195734

Genomics

Comparative Map Data

Mtdh
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	67,192,592 - 67,250,819 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	67,192,393 - 67,249,584 (+)	Ensembl				GRCr8
mRatBN7.2	7	65,306,464 - 65,365,647 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	65,306,400 - 65,364,413 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	67,196,680 - 67,252,148 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	69,398,395 - 69,453,863 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	69,258,737 - 69,313,219 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	72,771,018 - 72,830,599 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	72,772,440 - 72,827,908 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	73,209,610 - 73,233,540 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	7	72,938,130 - 72,997,298 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	69,527,182 - 69,583,015 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	62,413,649 - 62,469,018 (+)	NCBI		Celera
RGSC_v3.1	7	69,547,911 - 69,603,745 (+)	NCBI
Cytogenetic Map	7	q22	NCBI

MTDH
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	97,644,184 - 97,730,260 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	97,644,013 - 97,730,260 (+)	Ensembl			hg38	GRCh38
GRCh37	8	98,656,412 - 98,742,488 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	98,725,583 - 98,807,714 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	8	98,725,582 - 98,807,711	NCBI
Celera	8	94,842,407 - 94,928,366 (+)	NCBI		Celera
Cytogenetic Map	8	q22.1	NCBI
HuRef	8	93,862,743 - 93,949,052 (+)	NCBI		HuRef
CHM1_1	8	98,696,633 - 98,783,342 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	98,769,667 - 98,855,740 (+)	NCBI		T2T-CHM13v2.0

Mtdh
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	34,082,613 - 34,143,683 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	34,082,840 - 34,145,770 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	15	34,082,442 - 34,143,537 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	34,082,694 - 34,145,624 (+)	Ensembl			mm10	GRCm38
MGSCv37	15	34,012,474 - 34,072,140 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	15	34,027,370 - 34,085,968 (+)	NCBI		MGSCv36	mm8
Celera	15	34,707,184 - 34,766,810 (+)	NCBI		Celera
Cytogenetic Map	15	B3.1	NCBI
cM Map	15	13.98	NCBI

Mtdh
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955417	13,479,762 - 13,537,950 (+)	Ensembl
ChiLan1.0	NW_004955417	13,479,398 - 13,540,706 (+)	NCBI	ChiLan1.0	ChiLan1.0

MTDH
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	114,986,543 - 115,069,143 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	90,528,605 - 90,614,746 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	94,282,432 - 94,368,516 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	96,472,750 - 96,552,986 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	96,473,247 - 96,551,341 (+)	Ensembl			panPan2	panpan1.1

MTDH
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	29	41,675,601 - 41,732,389 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	29	41,640,035 - 41,729,949 (+)	Ensembl			canFam3	CanFam3.1
ROS_Cfam_1.0	29	41,870,170 - 41,926,925 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	29	41,869,793 - 41,926,513 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	29	41,908,451 - 41,965,166 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	29	41,878,798 - 41,935,435 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	29	42,344,127 - 42,400,842 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Mtdh
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	37,588,843 - 37,653,629 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	45,016,099 - 45,079,710 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936470	45,016,099 - 45,079,709 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MTDH
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	39,051,537 - 39,113,385 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	4	39,052,895 - 39,113,380 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	42,097,775 - 42,166,475 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MTDH
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	92,563,480 - 92,641,874 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	92,563,550 - 92,640,231 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666039	48,121,736 - 48,200,807 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mtdh
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624763	4,905,044 - 4,967,014 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624763	4,905,261 - 4,967,014 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Mtdh
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	207,824,863 - 207,883,150 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Mtdh
255 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	268
Count of miRNA genes:	77
Interacting mature miRNAs:	97
Transcripts:	ENSRNOT00000009989, ENSRNOT00000041065, ENSRNOT00000045470
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
7411569	Bw137	Body weight QTL 137		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	7	23807606	68807606	Rat
10053722	Scort27	Serum corticosterone level QTL 27	2.41	0.0083	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	7	45113903	90113903	Rat
1549840	Bss5	Bone structure and strength QTL 5	9.8		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	7	26638057	71638057	Rat
1357336	Gluco6	Glucose level QTL 6	3.4		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	7	51700643	96700643	Rat
1300127	Srn1	Serum renin concentration QTL 1	3.87		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	7	24179478	86817926	Rat
10059605	Kidm47	Kidney mass QTL 47	2.91	0.05	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	7	49137999	67614020	Rat
1358361	Sradr5	Stress Responsive Adrenal Weight QTL 5	5.55		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	7	31770293	110435881	Rat
1298525	Cm1	Cardiac mass QTL 1	2.7		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	7	56625161	101625161	Rat
631513	Scl7	Serum cholesterol level QTL 7	4.1		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	7	39845902	84845902	Rat
631504	Cm27	Cardiac mass QTL 27	3.45		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	7	46307490	127866166	Rat
10755453	Coatc12	Coat color QTL 12		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	32998702	77998702	Rat
1559283	Emca4	Estrogen-induced mammary cancer QTL 4	3.7		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	7	63889858	108889858	Rat
1300151	Bp181	Blood pressure QTL 181	3.36		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	7	55498584	105834451	Rat
7411605	Foco14	Food consumption QTL 14	24.1	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	36178764	81178764	Rat
738030	Anxrr8	Anxiety related response QTL 8	4.1		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	48475049	93475049	Rat
1643004	Pain2	Pain QTL 2	1		mechanical nociception trait (VT:0002734)	self mutilation severity score (CMO:0002145)	7	10112916	99900612	Rat
1300149	Cm6	Cardiac mass QTL 6	4.09		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	7	1	104117804	Rat
631534	Lnnr1	Liver neoplastic nodule remodeling QTL 1	3.85	0.001	liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)	7	36178764	81178764	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	1509236	116977875	Rat
61357	Bp38	Blood pressure QTL 38	1.6	0.052	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	40540077	123682549	Rat
2316947	Rf58	Renal function QTL 58	7.8		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	7	49682832	115766396	Rat
1298528	Bp169	Blood pressure QTL 169		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	62963207	107963207	Rat
1576303	Ept7	Estrogen-induced pituitary tumorigenesis QTL 7	3.7		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	7	63889858	108889858	Rat
1300132	Bp182	Blood pressure QTL 182	3.49		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	21541977	86817926	Rat
2316955	Stl24	Serum triglyceride level QTL 24	7.1		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	7	49682832	115766396	Rat
2316952	Pur22	Proteinuria QTL 22	5.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	7	49682832	115766396	Rat
2303582	Gluco53	Glucose level QTL 53	3		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	7	48603087	93603087	Rat
61439	Cia8	Collagen induced arthritis QTL 8	5.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	7	27182914	72182914	Rat

Markers in Region

RH131760

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	65,363,907 - 65,364,090 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	73,066,024 - 73,066,206	NCBI	Rnor6.0
Rnor_6.0	7	72,828,860 - 72,829,042	NCBI	Rnor6.0
Rnor_5.0	7	72,995,559 - 72,995,741	UniSTS	Rnor5.0
Rnor_5.0	7	73,234,493 - 73,234,675	UniSTS	Rnor5.0
RGSC_v3.4	7	69,583,968 - 69,584,150	UniSTS	RGSC3.4
Celera	7	62,469,970 - 62,470,152	UniSTS
Cytogenetic Map	7	q22	UniSTS

RH143355

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	65,307,174 - 65,307,386 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	72,772,126 - 72,772,337	NCBI	Rnor6.0
Rnor_5.0	7	72,938,825 - 72,939,036	UniSTS	Rnor5.0
RGSC_v3.4	7	69,526,868 - 69,527,079	UniSTS	RGSC3.4
Celera	7	62,413,335 - 62,413,546	UniSTS
Cytogenetic Map	7	q22	UniSTS

RH140727

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	65,307,991 - 65,308,138 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	72,772,943 - 72,773,089	NCBI	Rnor6.0
Rnor_5.0	7	72,939,642 - 72,939,788	UniSTS	Rnor5.0
RGSC_v3.4	7	69,527,685 - 69,527,831	UniSTS	RGSC3.4
Celera	7	62,414,152 - 62,414,298	UniSTS
Cytogenetic Map	7	q22	UniSTS

RH135870

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	65,364,100 - 65,364,250 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	73,066,217 - 73,066,366	NCBI	Rnor6.0
Rnor_6.0	7	72,829,053 - 72,829,202	NCBI	Rnor6.0
Rnor_5.0	7	72,995,752 - 72,995,901	UniSTS	Rnor5.0
Rnor_5.0	7	73,234,686 - 73,234,835	UniSTS	Rnor5.0
RGSC_v3.4	7	69,584,161 - 69,584,310	UniSTS	RGSC3.4
Celera	7	62,470,163 - 62,470,312	UniSTS
Cytogenetic Map	7	q22	UniSTS

RH124812

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	65,363,143 - 65,363,263 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	73,065,259 - 73,065,378	NCBI	Rnor6.0
Rnor_6.0	7	72,828,096 - 72,828,215	NCBI	Rnor6.0
Rnor_5.0	7	72,994,795 - 72,994,914	UniSTS	Rnor5.0
Rnor_5.0	7	73,233,728 - 73,233,847	UniSTS	Rnor5.0
RGSC_v3.4	7	69,583,203 - 69,583,322	UniSTS	RGSC3.4
Celera	7	62,469,206 - 62,469,325	UniSTS
Cytogenetic Map	7	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001437968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437969	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_133398	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241521	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241523	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241524	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF100421	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225537	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226094	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227818	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227915	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ230582	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ230969	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ231026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ231703	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ233989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ234381	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ234551	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ234823	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000009989 ⟹ ENSRNOP00000009989

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	67,192,393 - 67,249,584 (+)	Ensembl
mRatBN7.2 Ensembl	7	65,307,484 - 65,364,413 (+)	Ensembl
Rnor_6.0 Ensembl	7	72,772,440 - 72,827,908 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096827 ⟹ ENSRNOP00000077252

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	67,192,393 - 67,249,584 (+)	Ensembl
mRatBN7.2 Ensembl	7	65,306,400 - 65,364,413 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000105848 ⟹ ENSRNOP00000088806

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	67,192,393 - 67,249,584 (+)	Ensembl
mRatBN7.2 Ensembl	7	65,306,400 - 65,364,413 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000108860 ⟹ ENSRNOP00000078672

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	67,192,393 - 67,249,584 (+)	Ensembl
mRatBN7.2 Ensembl	7	65,306,400 - 65,364,413 (+)	Ensembl

RefSeq Acc Id:

NM_133398 ⟹ NP_596889

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	67,192,660 - 67,248,128 (+)	NCBI
mRatBN7.2	7	65,307,489 - 65,362,956 (+)	NCBI
Rnor_6.0	7	72,772,440 - 72,827,908 (+)	NCBI
Rnor_5.0	7	73,209,610 - 73,233,540 (+)	NCBI
RGSC_v3.4	7	69,527,182 - 69,583,015 (+)	RGD
Celera	7	62,413,649 - 62,469,018 (+)	RGD

Sequence:

show sequence

AGCCATTGTTCCGCCGGGGGAGGACAAGCGAGGCCTGGCGCTGGCGCCCCGACGCCACTTAGCG
GCCGCCTCTGGAGACACTCTGTCCCCGCCGCCCCGTGTCCTCCTGGCGGCGGCGGCGTGAGGCC
GACTGGAGGGAGTGGGAACCCTCGGCCCTCCCCGTGGCGGCGGCGGCCACCTATTCCCCACTCT
GGAGTGAGGGGCGGCCGCGATGCGCTTGGCCTAAGGTGTCGCGGCCCTCGTCGCTTCCCACGAC
TGTTCCAGCGGCGTCTGTGCTCCCCGGCGTCATCCCGAGAGTCTCTGACGGGAGGGAAGATGGC
TGCACGAAGCTGGCAGGACGAACTGGCTCAGCAGGCCGAGGAGGGCTCTGCCCGGCTGCGGGAG
TTGCTCTCTGTCGGCCTAGGTTTTCTGCGCACGGAGTTGGGCCTCGACCTGGGGTTGGAGCCGA
AGCGGTACCCGAGCTGGGTGATCCTGGTGGGCACCGGCGCTCTCGGGTTGCTGCTTCTCTTCCT
CCTAGGTTACGGCTGGGCCGCTGCTTGCGCCGGCGCCCGCAAAAAGCGAAGGAGCCCGCCCCGC
AAGCGGGAGGAGGTGACCCCGCCGACTCCGGCCCCCGAGGACCCAGCCCAACTGAAGAATCTCA
GAAGCGAGGAGCAAAAGAAAAAGAACCGGAAGAAGCTGCCTGAAAAGCCCAAACCAAATGGACG
GACTGTTGAAATACCTGAAGATGAAGTTGTTAGAACTCCCCGAAGTATAACTGCCAAGCAGCCA
CCAGAGACAGACAAGAAAAATGAAAAGTCAAAGAAAAATAAGAAGAAGTCAAAGTCAGATGCTA
AAGCAGTGCAAAACAGTTCACGCCATGATGGAAAGGAAGTTGATGAAGGAGCCTGGGAAACTAA
AATTAGTCACAGAGAGAAACGACAACAGCGTAAACGTGATAAAGTGCTGACTGATTCTGGTTCA
TTGGATTCAACTATCCCTGGGATAGAAAATACCATCACAGTTACCACCGAGCAACTTACAACTG
CATCATTTCCTGTTGGTTCCAAGAAGAATAAAGGTGATTCTCATCTAAATGTTCAAGTTAGCAA
CTTTAAGTCTGGAAAAGGAGATTCTACACTTCAGGTTTCTTCAGGGTTGAATGAAAATATTACT
GTCAATGGAGGAGGCTGGAGTGAAAAGTCTGTAAAACTCTCCTCACAATTGAGTGCAGGTGAGG
AGAAGTGGAACTCTGTCCCACCTGCTTCTGCAGGCAAGAGAAAAACAGAGCAGTCTGCTTGGAC
TCAAGACCCTGGTGATACTAATGCAAATGGGAAAGACTGGGGAAGGAATTGGAGTGATCGCTCA
ATATTTTCTGGCATTGGATCTACTGCTGAGCCAGTTTCTCAGTCTACCACTTCTGATTATCAGT
GGGATGGTAGCCGTAATCAGCCCCATATCGATGATGAATGGTCTGGGTTAAATGGTTTGTCTTC
TGCTGATCCTAGCTCAGACTGGAATGCACCAGCAGAAGAGTGGGGGAACTGGGTAGATGAAGAT
AGAGCTTCACTTCTGAAGTCCCAGGAGCCGATTTCTAATGATCAAAAGGATTCAGATGATGATA
AGGAAAAAGGAGAAGGAGCTCTTCCAACTGGAAAATCTAAAAAGAAAAAAAAGAAAAAGAAGAA
GCAAGGTGAAGATAACTCTATCACCCAGGACACAGAAGACCTAGAAAAGGACACTAGAGAAGAG
CTTCCAGTGAATACCTCGAAAGCCCGTCCAAAACAGGAGAAAGCTTGTTCCCTGAAGACCATGA
GCACTAGTGATCCAGTTGAAGTACTCATCAAAAATAGCCAGCCTATCAAGACTCTTCCACCTGC
TATCTCTGCCGAGCCATCTGTTACTTTATCAAAGGGTGACTCTGACAAGAGCTCTTCCCAAGTG
CCACCGATGTTACAAGACACAGACAAACCCAAGTCAAATGCTAAGCAAAACAGTGTGCCTCCCT
CACAGACCAAGTCTGAAACTAATTGGGAATCTCCAAAACAAATAAAAAAGAAGAAAAAGGCCAG
ACGGGAAACGTGAATTTTTTTCCTAAATTGGACATGTGTTTACAAACACTGTCTTGAAGATTAT
GCTGTTTATGCAATAATTTGTGAACATGTACAGAGTTTTATATAAATTTAAACCAATTTTTAAA
ACAAAACTGAACACAACCACCATAAAATGGAATCAAAGGGAAAGTTAATTTATGAAAT

hide sequence

RefSeq Acc Id:

XM_006241520 ⟹ XP_006241582

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	67,192,592 - 67,250,819 (+)	NCBI
mRatBN7.2	7	65,306,464 - 65,365,647 (+)	NCBI
Rnor_6.0	7	72,771,018 - 72,830,599 (+)	NCBI
Rnor_5.0	7	72,938,130 - 72,997,298 (+)	NCBI

Sequence:

show sequence

AAAACAAAGTGCAGATGCATGTGCATACACAAAAAGGAGGGAGGAAGGGTGAGATAGGCTGACA
AGTATGTCCCTGATACCAAATACAGCAAATTGAAAAAACACACACAAGATGACATGATCTTACT
AAATCATTTACTTGCTAGACTATCAGAGGGACTACCATACTCACCTATGATTACTGCAATCCTC
TAATTCATAAATCTGAGTGGGATAATCTAAATTGATCAGTAGAATTTCTCAGGAAACTATGACC
AACACAAATAGGTGAGGTTATAAATCCTATTCCAAAACTATGAATGGAATTTGTTAATTTTTAG
AGTTCATGAAGATCTCATTTTAAGGTTCTGGCCTTTATAATTTAGCCCTTAATTATAAGCGTGC
AAAAAGCTTAGTAAGAGTAGTTTATTACTTATAAAACTCCAAGCCACCCATTAATCACAAAACT
CATTACAATACTGATGGGTCAAAATACATGAATAGGTTTTTAGTTTGTATTTCAGTTGTTTACA
TGCTAATTATCACTTAATTATAGACACTGTTTCCTTACAGCAAAGGCAAAATACAAGTACTAAG
GTAGTCCCCAAGCATTTGTATAATTAAGAACTGAAGAAGCGCCTCAGTTATTTTTGGTCCTGGG
AATCAACGCCAGAGCCTTGCATATGTTCAGCAAGCATGTTCTGTTACTGAGCGACACTCCACAA
CCCACCTAGTTTCCCTCTATTGCTACATTTGACTGTTGGACAACACATGCACTCAAAAATTGCA
ACTTTTTGTGTCGTATAAAAGCGTAAAATAATATGCTTCTCTTGCATATAAATACAGTCTAATG
GGCTTCCTCTCAATACTTCCTATTAAGGTTACAAATTAGTAGGAAAATAATAGTGCCTCCCACG
GGTTTGCGGACTTTTTAATTCTGGAGCCTGACAACAGACAGCAGGAGTGAATGAGAGAACCGAC
GCAAACGCTGGCAAATGTTAATATGCTAGTCTGCCACGAAGAAATACTCAGATGTGAATTACAC
GTGCCCGTGGCCTCAGACTCCACAGAGCTCCCTCTGGAAGCATCCAACTGGCCCCTGACCTAGG
GAGAAAAAGTCGGTCCACTGCACCATCACTGCAGGAAAGAGAGCGTAAAGCCAGCTCATACTCT
GATAGATCTGACCGTCTTGCTCGCGCGCAGGCCTCGAACCGGAGCCCCTTCTGCACTCAGAGCG
CCCGAGCCTGCAGAAGTTCCGCAGCCAGGCTTCTACTCCGGCTCCTCAAGCGGCGCGTGGCCCC
AAGCCGCCAACAGCTCAAGGAGACCCCTCCAAGACCAAGTCTGCCCGGCCCCACCCATCGCACC
CACGTGACCCATGCCACGCCCACAACCTCCACGTGACCCGGTCGGCCTCCGCGCGCAGCGTGGA
TCGCGGCCAGAGCCGCCATTGTTCCGCCGGGGGAGGACAGCGAGGCCTGGCGCTGGCGCCCCGA
CGCCACTTAGCGGCCGCCTCTGGAGACACTCTGTCCCCGCCGCCCCGTGTCCTCCTGGCGGCGG
CGGCGTGAGGCCGACTGGAGGGAGTGGGAACCCTCGGCCCTCCCCGTGGCGGCGGCGGCCACCT
ATTCCCCACTCTGGAGTGAGGGGCGGCCGCGATGCGCTTGGCCTGAGGTGTCGCGGCCCTCGTC
GCTTCCCACGACTGTTCCAGCGGCGTCTGTGCTCCCCGGCGTCATCCCGAGAGTCTCTGACGGG
AGGGAAGATGGCTGCACGAAGCTGGCAGGACGAACTGGCTCAGCAGGCCGAGGAGGGCTCTGCC
CGGCTGCGGGAGTTGCTCTCTGTCGGCCTAGGTTTTCTGCGCACGGAGTTGGGCCTCGACCTGG
GGTTGGAGCCGAAGCGGTACCCGAGCTGGGTGATCCTGGTGGGCACCGGCGCTCTCGGGTTGCT
GCTTCTCTTCCTCCTAGGTTACGGCTGGGCCGCTGCTTGCGCCGGCGCCCGCAAAAAGCGAAGG
AGCCCGCCCCGCAAGCGGGAGGAGGTGACCCCGCCGACTCCGGCCCCCGAGGACCCAGCCCAAC
TGAAGAATCTCAGAAGCGAGGAGCAAAAGAAAAAGAACCGGAAGAAGCTGCCTGAAAAGCCCAA
ACCAAATGGACGGACTGTTGAAATACCTGAAGATGAAGTTGTTAGAACTCCCCGAAGTATAACT
GCCAAGCAGCCACCAGAGACAGACAAGAAAAATGAAAAGTCAAAGAAAAATAAGAAGAAGTCAA
AGTCAGATGCTAAAGCAGTGCAAAACAGTTCACGCCATGATGGAAAGGAAGTTGATGAAGGAGC
CTGGGAAACTAAAATTAGTCACAGAGAGAAACGACAACAGCGTAAACGTGATAAAGTGCTGACT
GATTCTGGTTCATTGGATTCAACTATCCCTGGGATAGAAAATACCATCACAGTTACCACCGAGC
AACTTACAACTGCATCATTTCCTGTTGGTTCCAAGAAGAATAAAGGTGATTCTCATCTAAATGT
TCAAGTTAGCAACTTTAAGTCTGGAAAAGGAGATTCTACACTTCAGGTTTCTTCAGGGTTGAAT
GAAAATATTACTGTCAATGGAGGAGGCTGGAGTGAAAAGTCTGTAAAACTCTCCTCACAATTGA
GTGCAGGTGAGGAGAAGTGGAACTCTGTCCCACCTGCTTCTGCAGGCAAGAGAAAAACAGAGCA
GTCTGCTTGGACTCAAGACCCTGGTGATACTAATGCAAATGGGAAAGACTGGGGAAGGAATTGG
AGTGATCGCTCAATATTTTCTGGCATTGCTGCTTGGTCTAGTGTGGCTAGGGGAGTGAGTGCCT
CTCAACAGAACTCTGCTTCTTTTGCATCTCTCACACTTAACTCTGCTGTCTCTGGATCTACTGC
TGAGCCAGTTTCTCAGTCTACCACTTCTGATTATCAGTGGGATGGTAGCCGTAATCAGCCCCAT
ATCGATGATGAATGGTCTGGGTTAAATGGTTTGTCTTCTGCTGATCCTAGCTCAGACTGGAATG
CACCAGCAGAAGAGTGGGGGAACTGGGTAGATGAAGATAGAGCTTCACTTCTGAAGTCCCAGGA
GCCGATTTCTAATGATCAAAAGGATTCAGATGATGATAAGGAAAAAGGAGAAGGAGCTCTTCCA
ACTGGAAAATCTAAAAAGAAAAAAAAGAAAAAGAAGAAGCAAGGTGAAGATAACTCTATCACCC
AGGACACAGAAGACCTAGAAAAGGACACTAGAGAAGAGCTTCCAGTGAATACCTCGAAAGCCCG
TCCAAAACAGGAGAAAGCTTGTTCCCTGAAGACCATGAGCACTAGTGATCCAGTTGAAGTACTC
ATCAAAAATAGCCAGCCTATCAAGACTCTTCCACCTGCTATCTCTGCCGAGCCATCTGTTACTT
TATCAAAGGGTGACTCTGACAAGAGCTCTTCCCAAGTGCCACCGATGTTACAAGACACAGACAA
ACCCAAGTCAAATGCTAAGCAAAACAGTGTGCCTCCCTCACAGACCAAGTCTGAAACTAATTGG
GAATCTCCAAAACAAATAAAAAAGAAGAAAAAGGCCAGACGGGAAACGTGAATTTTTTTCCTAA
ATTGGACATGTGTTTACAAACACTGTCTTGAAGATTATGCTGTTTATGCAATAATTTGTGAACA
TGTACAGAGTTTTATATAAATTTAAACCAATTTTTAAAACAAAACTGAACACAACCACCATAAA
ATGGAATCAAAGGAAAGTTAATTTATGAAATTAAGAGGTCAACAATACATACTACAGTGCTGGA
AGACACTCGGGAGAGACTTTGCAATTGAACGAGAATGATCATAATTTAAGAATATTATCCTGGT
TTTACAACAGTTCCCTGTTTACAACAGATTGTGCCCTGTTTCATCTGCAGCTGAGGAATAATGG
ATTCTGATTAGAGAGAAGGCTGCCTAGAAGCCAGTAGGCAAGTCCTTGGATCTTATGCACGACC
TTAGACCATTTGAATCTGTTTTATGCTTAAATCAAAGTGCTTTGATTAAATGCATACCTGCCAT
ATCTTTACCTATTTGTTGTAGCAATTTGTATTAAAAGAATCACAAGTGCAAATAAAAGGTCATT
TATCATTTATTTAACTAAACTGTCTTGGTTTAGTTTACAGTTCTTTAAAAGTTCTAAATTAAAA
CATTGAAAAATGCAATTGACAGACACCTGTATGGCTTACAAAGTTATTTTTGATAGTCTTGCAT
TACTTGAATTATTCAAAGTAACAGTATATTTTAAATTAAGAAAGGTAAATATATTATTTGTTTG
ATACATTAAGACTGAGACTAACAGTGCTCTTGTTTATGATTTGAAAACTTTTCAGGCAAAATCC
AACTTAATATTTTTCCTTTCCCTAGCAATTTTCCAGTGTCAACTCTTAGTTGCTAGTAATTTTT
TACCTTAAAAATAAAGTAATTCGCAACTTTTGAGCATACGACGGAGAATGGAAAAGTAGTCAGA
CAGCTTTAATTGACATTGTGGAGACCTCCGGTTATCAGGAATACATTTTTTTACTGCCTTAACC
TCCTGTAGTGCGTAGAATATGCATCAATTTCTTGAAGGGGATTCATGTTTTTATAAGAATTTTC
ATGTAACTATTGCAATTGTGGTCAAAAAAAGGAACATTTTCTGCTTGAAACTGTGTTGATTTAA
ATGACGTATGATCTGTCACCATTTTCAGGCACTGTGTGATTCCTAGGAAAGTGGCAGGCCTCTC
TGTAACTGTTAATAGTGCATGCTCGGCCATGTACACTGTAAATAGCCTTTACCAAACGTGTTTG
ACAAGGACCATAATTAACATCACTTTAGTGAATTGTAATTTTAAAAAAGCCATGATTTATTGAT
GTGAGCGGCTTGTTTTCGTGTGGCGCCAGGAATGAACCTGTTTAAAAGCTATAACCAATGGTAC
TGATCTATCCATTAAATACTGTCCTTATATTTGACTGTAGTTTAATAGTATTGTCAACTAGGAA
AGCTACAAGATGTAAAATGGTTTTCGTTCTGTTGAAGACTGGCCTTATTAATGGACAGCTTTCC
TCAGAAGTGATTAACAACTTTTTTTATTGGGTGTTAACATCTGTTTCAGGAACATGGCAGTATG
TTTACATGTTGTCAGAAGTTTTGTTTGATTGAATGGGATTTCTAAATTAACTTACTTGTTTAAA
TAAATTCAGAAATGGATAGCATTGTTTTTATTTGCTTCACTATTGGGGTAAATAATAGCTGATG
TGCCAGGAATGGAGCCTTCAGATGGCTGCTGTGAGCTTCATGTTCCCTCAGGGGATGCCACGCT
ATGTCTCAAGGAGAAGTTGATAGGGAGTCTGTAATTACAGAGTGTGCCAAAAGGTCAGTGCTCA
CAAGTTTAATTGAACTCTCTCAACTCTACCTCACTGTTCCTTTTCCTTATAATTCTCTGGGCTA
GAACAAATAAGAAACTTTATTTTTCACTTCAATGTCTCCGGATGCAATCACTTATAGGAGGTGG
CACCTACACCAGGTAGCAAGAATACCGTCTTTTTGCAGAGGAATATATAATGGGGGGAAGCAGA
GTGACACTGGGTGGGTCAGTGTGGAGGTGGCCTCTATGCCTGCCTTCTCTCTGGCTTGCGAGCC
AGGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
AAGGAGGCAGGTATATGAGTGAAAATTAATCATTCACTGCTCTTTGCCTCTGTATAGATCTTTG
TGTGGCAGGGCAGGGATTTCTTGTCACTGATCAGAGGAACTGGTTTCTGCCATCAACTCAGAAA
ACTCTGAGATTTAGGTAATGGTGATTAGAGAGTGGCAACAGAAGACTGGGTATTCTCTGCTGGC
CGGAATGAGGGCCCCTGATGCCACCTGTTTCCCCAAAAGGCTCTCTGAAAAGCCTTTCTGTTGT
GGGGCGGGGCATGGGCATGTCAGAGTTCTCCAACTGCATTGTCCCTATCTTATACCCTAAATTG
AGAAACAGTTGAGAGAGTCCAAAAAGAAAGTTGAAATAAAATATCATTAATGTAATTTACCTTG
TTTAATTTGTGCATGCATTTTATTGGGGAGGGGAGGTTGGAATAATTTATCTAAAACTAATGGT
ATTATTTCATAGGCTAATCCAGTTTGTATTTGAGTTAAAGATCCCAGAGGGTAGTAATTAATTA
CAGAGTTTAGTTTTTCTTAATTAAAAGCAGTCCTCTATTAATATAGTATGAAATGTCAAAATTT
AGGATTTAAGTTTAAGGTCTAATGGCTATTTTAAAGTTTTTCTGTAAACTCATTGCACAAACTG
GAATTGGAATTGCTTTCAAAAGACTTGGGAAATGAAAATGTGTCATGTAAGATGCACTGAGTGT
TGTAAATAAAATACTGTTTTTGTTTTGTTTAAAA

hide sequence

RefSeq Acc Id:

XM_006241521 ⟹ XP_006241583

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	67,192,592 - 67,250,819 (+)	NCBI
mRatBN7.2	7	65,306,464 - 65,365,647 (+)	NCBI
Rnor_6.0	7	72,771,018 - 72,830,599 (+)	NCBI
Rnor_5.0	7	72,938,130 - 72,997,298 (+)	NCBI

Sequence:

show sequence

AAAACAAAGTGCAGATGCATGTGCATACACAAAAAGGAGGGAGGAAGGGTGAGATAGGCTGACA
AGTATGTCCCTGATACCAAATACAGCAAATTGAAAAAACACACACAAGATGACATGATCTTACT
AAATCATTTACTTGCTAGACTATCAGAGGGACTACCATACTCACCTATGATTACTGCAATCCTC
TAATTCATAAATCTGAGTGGGATAATCTAAATTGATCAGTAGAATTTCTCAGGAAACTATGACC
AACACAAATAGGTGAGGTTATAAATCCTATTCCAAAACTATGAATGGAATTTGTTAATTTTTAG
AGTTCATGAAGATCTCATTTTAAGGTTCTGGCCTTTATAATTTAGCCCTTAATTATAAGCGTGC
AAAAAGCTTAGTAAGAGTAGTTTATTACTTATAAAACTCCAAGCCACCCATTAATCACAAAACT
CATTACAATACTGATGGGTCAAAATACATGAATAGGTTTTTAGTTTGTATTTCAGTTGTTTACA
TGCTAATTATCACTTAATTATAGACACTGTTTCCTTACAGCAAAGGCAAAATACAAGTACTAAG
GTAGTCCCCAAGCATTTGTATAATTAAGAACTGAAGAAGCGCCTCAGTTATTTTTGGTCCTGGG
AATCAACGCCAGAGCCTTGCATATGTTCAGCAAGCATGTTCTGTTACTGAGCGACACTCCACAA
CCCACCTAGTTTCCCTCTATTGCTACATTTGACTGTTGGACAACACATGCACTCAAAAATTGCA
ACTTTTTGTGTCGTATAAAAGCGTAAAATAATATGCTTCTCTTGCATATAAATACAGTCTAATG
GGCTTCCTCTCAATACTTCCTATTAAGGTTACAAATTAGTAGGAAAATAATAGTGCCTCCCACG
GGTTTGCGGACTTTTTAATTCTGGAGCCTGACAACAGACAGCAGGAGTGAATGAGAGAACCGAC
GCAAACGCTGGCAAATGTTAATATGCTAGTCTGCCACGAAGAAATACTCAGATGTGAATTACAC
GTGCCCGTGGCCTCAGACTCCACAGAGCTCCCTCTGGAAGCATCCAACTGGCCCCTGACCTAGG
GAGAAAAAGTCGGTCCACTGCACCATCACTGCAGGAAAGAGAGCGTAAAGCCAGCTCATACTCT
GATAGATCTGACCGTCTTGCTCGCGCGCAGGCCTCGAACCGGAGCCCCTTCTGCACTCAGAGCG
CCCGAGCCTGCAGAAGTTCCGCAGCCAGGCTTCTACTCCGGCTCCTCAAGCGGCGCGTGGCCCC
AAGCCGCCAACAGCTCAAGGAGACCCCTCCAAGACCAAGTCTGCCCGGCCCCACCCATCGCACC
CACGTGACCCATGCCACGCCCACAACCTCCACGTGACCCGGTCGGCCTCCGCGCGCAGCGTGGA
TCGCGGCCAGAGCCGCCATTGTTCCGCCGGGGGAGGACAGCGAGGCCTGGCGCTGGCGCCCCGA
CGCCACTTAGCGGCCGCCTCTGGAGACACTCTGTCCCCGCCGCCCCGTGTCCTCCTGGCGGCGG
CGGCGTGAGGCCGACTGGAGGGAGTGGGAACCCTCGGCCCTCCCCGTGGCGGCGGCGGCCACCT
ATTCCCCACTCTGGAGTGAGGGGCGGCCGCGATGCGCTTGGCCTGAGGTGTCGCGGCCCTCGTC
GCTTCCCACGACTGTTCCAGCGGCGTCTGTGCTCCCCGGCGTCATCCCGAGAGTCTCTGACGGG
AGGGAAGATGGCTGCACGAAGCTGGCAGGACGAACTGGCTCAGCAGGCCGAGGAGGGCTCTGCC
CGGCTGCGGGAGTTGCTCTCTGTCGGCCTAGGTTTTCTGCGCACGGAGTTGGGCCTCGACCTGG
GGTTGGAGCCGAAGCGGTACCCGAGCTGGGTGATCCTGGTGGGCACCGGCGCTCTCGGGTTGCT
GCTTCTCTTCCTCCTAGGTTACGGCTGGGCCGCTGCTTGCGCCGGCGCCCGCAAAAAGCGAAGG
AGCCCGCCCCGCAAGCGGGAGGAGGTGACCCCGCCGACTCCGGCCCCCGAGGACCCAGCCCAAC
TGAAGAATCTCAGAAGCGAGGAGCAAAAGAAAAAGAACCGGAAGAAGCTGCCTGAAAAGCCCAA
ACCAAATGGACGGACTGTTGAAATACCTGAAGATGAAGTTGTTAGAACTCCCCGAAGTATAACT
GCCAAGCAGCCACCAGAGACAGACAAGAAAAATGAAAAGTCAAAGAAAAATAAGAAGAAGTCAA
AGTCAGATGCTAAAGCAGTGCAAAACAGTTCACGCCATGATGGAAAGGAAGTTGATGAAGGAGC
CTGGGAAACTAAAATTAGTCACAGAGAGAAACGACAACAGCGTAAACGTGATAAAGTGCTGACT
GATTCTGGTTCATTGGATTCAACTATCCCTGGGATAGAAAATACCATCACAGTTACCACCGAGC
AACTTACAACTGCATCATTTCCTGTTGGTTCCAAGAAGAATAAAGTTTCTTCAGGGTTGAATGA
AAATATTACTGTCAATGGAGGAGGCTGGAGTGAAAAGTCTGTAAAACTCTCCTCACAATTGAGT
GCAGGTGAGGAGAAGTGGAACTCTGTCCCACCTGCTTCTGCAGGCAAGAGAAAAACAGAGCAGT
CTGCTTGGACTCAAGACCCTGGTGATACTAATGCAAATGGGAAAGACTGGGGAAGGAATTGGAG
TGATCGCTCAATATTTTCTGGCATTGCTGCTTGGTCTAGTGTGGCTAGGGGAGTGAGTGCCTCT
CAACAGAACTCTGCTTCTTTTGCATCTCTCACACTTAACTCTGCTGTCTCTGGATCTACTGCTG
AGCCAGTTTCTCAGTCTACCACTTCTGATTATCAGTGGGATGGTAGCCGTAATCAGCCCCATAT
CGATGATGAATGGTCTGGGTTAAATGGTTTGTCTTCTGCTGATCCTAGCTCAGACTGGAATGCA
CCAGCAGAAGAGTGGGGGAACTGGGTAGATGAAGATAGAGCTTCACTTCTGAAGTCCCAGGAGC
CGATTTCTAATGATCAAAAGGATTCAGATGATGATAAGGAAAAAGGAGAAGGAGCTCTTCCAAC
TGGAAAATCTAAAAAGAAAAAAAAGAAAAAGAAGAAGCAAGGTGAAGATAACTCTATCACCCAG
GACACAGAAGACCTAGAAAAGGACACTAGAGAAGAGCTTCCAGTGAATACCTCGAAAGCCCGTC
CAAAACAGGAGAAAGCTTGTTCCCTGAAGACCATGAGCACTAGTGATCCAGTTGAAGTACTCAT
CAAAAATAGCCAGCCTATCAAGACTCTTCCACCTGCTATCTCTGCCGAGCCATCTGTTACTTTA
TCAAAGGGTGACTCTGACAAGAGCTCTTCCCAAGTGCCACCGATGTTACAAGACACAGACAAAC
CCAAGTCAAATGCTAAGCAAAACAGTGTGCCTCCCTCACAGACCAAGTCTGAAACTAATTGGGA
ATCTCCAAAACAAATAAAAAAGAAGAAAAAGGCCAGACGGGAAACGTGAATTTTTTTCCTAAAT
TGGACATGTGTTTACAAACACTGTCTTGAAGATTATGCTGTTTATGCAATAATTTGTGAACATG
TACAGAGTTTTATATAAATTTAAACCAATTTTTAAAACAAAACTGAACACAACCACCATAAAAT
GGAATCAAAGGAAAGTTAATTTATGAAATTAAGAGGTCAACAATACATACTACAGTGCTGGAAG
ACACTCGGGAGAGACTTTGCAATTGAACGAGAATGATCATAATTTAAGAATATTATCCTGGTTT
TACAACAGTTCCCTGTTTACAACAGATTGTGCCCTGTTTCATCTGCAGCTGAGGAATAATGGAT
TCTGATTAGAGAGAAGGCTGCCTAGAAGCCAGTAGGCAAGTCCTTGGATCTTATGCACGACCTT
AGACCATTTGAATCTGTTTTATGCTTAAATCAAAGTGCTTTGATTAAATGCATACCTGCCATAT
CTTTACCTATTTGTTGTAGCAATTTGTATTAAAAGAATCACAAGTGCAAATAAAAGGTCATTTA
TCATTTATTTAACTAAACTGTCTTGGTTTAGTTTACAGTTCTTTAAAAGTTCTAAATTAAAACA
TTGAAAAATGCAATTGACAGACACCTGTATGGCTTACAAAGTTATTTTTGATAGTCTTGCATTA
CTTGAATTATTCAAAGTAACAGTATATTTTAAATTAAGAAAGGTAAATATATTATTTGTTTGAT
ACATTAAGACTGAGACTAACAGTGCTCTTGTTTATGATTTGAAAACTTTTCAGGCAAAATCCAA
CTTAATATTTTTCCTTTCCCTAGCAATTTTCCAGTGTCAACTCTTAGTTGCTAGTAATTTTTTA
CCTTAAAAATAAAGTAATTCGCAACTTTTGAGCATACGACGGAGAATGGAAAAGTAGTCAGACA
GCTTTAATTGACATTGTGGAGACCTCCGGTTATCAGGAATACATTTTTTTACTGCCTTAACCTC
CTGTAGTGCGTAGAATATGCATCAATTTCTTGAAGGGGATTCATGTTTTTATAAGAATTTTCAT
GTAACTATTGCAATTGTGGTCAAAAAAAGGAACATTTTCTGCTTGAAACTGTGTTGATTTAAAT
GACGTATGATCTGTCACCATTTTCAGGCACTGTGTGATTCCTAGGAAAGTGGCAGGCCTCTCTG
TAACTGTTAATAGTGCATGCTCGGCCATGTACACTGTAAATAGCCTTTACCAAACGTGTTTGAC
AAGGACCATAATTAACATCACTTTAGTGAATTGTAATTTTAAAAAAGCCATGATTTATTGATGT
GAGCGGCTTGTTTTCGTGTGGCGCCAGGAATGAACCTGTTTAAAAGCTATAACCAATGGTACTG
ATCTATCCATTAAATACTGTCCTTATATTTGACTGTAGTTTAATAGTATTGTCAACTAGGAAAG
CTACAAGATGTAAAATGGTTTTCGTTCTGTTGAAGACTGGCCTTATTAATGGACAGCTTTCCTC
AGAAGTGATTAACAACTTTTTTTATTGGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTT
TACATGTTGTCAGAAGTTTTGTTTGATTGAATGGGATTTCTAAATTAACTTACTTGTTTAAATA
AATTCAGAAATGGATAGCATTGTTTTTATTTGCTTCACTATTGGGGTAAATAATAGCTGATGTG
CCAGGAATGGAGCCTTCAGATGGCTGCTGTGAGCTTCATGTTCCCTCAGGGGATGCCACGCTAT
GTCTCAAGGAGAAGTTGATAGGGAGTCTGTAATTACAGAGTGTGCCAAAAGGTCAGTGCTCACA
AGTTTAATTGAACTCTCTCAACTCTACCTCACTGTTCCTTTTCCTTATAATTCTCTGGGCTAGA
ACAAATAAGAAACTTTATTTTTCACTTCAATGTCTCCGGATGCAATCACTTATAGGAGGTGGCA
CCTACACCAGGTAGCAAGAATACCGTCTTTTTGCAGAGGAATATATAATGGGGGGAAGCAGAGT
GACACTGGGTGGGTCAGTGTGGAGGTGGCCTCTATGCCTGCCTTCTCTCTGGCTTGCGAGCCAG
GCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAA
GGAGGCAGGTATATGAGTGAAAATTAATCATTCACTGCTCTTTGCCTCTGTATAGATCTTTGTG
TGGCAGGGCAGGGATTTCTTGTCACTGATCAGAGGAACTGGTTTCTGCCATCAACTCAGAAAAC
TCTGAGATTTAGGTAATGGTGATTAGAGAGTGGCAACAGAAGACTGGGTATTCTCTGCTGGCCG
GAATGAGGGCCCCTGATGCCACCTGTTTCCCCAAAAGGCTCTCTGAAAAGCCTTTCTGTTGTGG
GGCGGGGCATGGGCATGTCAGAGTTCTCCAACTGCATTGTCCCTATCTTATACCCTAAATTGAG
AAACAGTTGAGAGAGTCCAAAAAGAAAGTTGAAATAAAATATCATTAATGTAATTTACCTTGTT
TAATTTGTGCATGCATTTTATTGGGGAGGGGAGGTTGGAATAATTTATCTAAAACTAATGGTAT
TATTTCATAGGCTAATCCAGTTTGTATTTGAGTTAAAGATCCCAGAGGGTAGTAATTAATTACA
GAGTTTAGTTTTTCTTAATTAAAAGCAGTCCTCTATTAATATAGTATGAAATGTCAAAATTTAG
GATTTAAGTTTAAGGTCTAATGGCTATTTTAAAGTTTTTCTGTAAACTCATTGCACAAACTGGA
ATTGGAATTGCTTTCAAAAGACTTGGGAAATGAAAATGTGTCATGTAAGATGCACTGAGTGTTG
TAAATAAAATACTGTTTTTGTTTTGTTTAAAA

hide sequence

RefSeq Acc Id:

XM_006241523 ⟹ XP_006241585

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	67,192,592 - 67,250,819 (+)	NCBI
mRatBN7.2	7	65,306,464 - 65,365,647 (+)	NCBI
Rnor_6.0	7	72,771,021 - 72,830,599 (+)	NCBI
Rnor_5.0	7	72,938,130 - 72,997,298 (+)	NCBI

Sequence:

show sequence

ACAAAGTGCAGATGCATGTGCATACACAAAAAGGAGGGAGGAAGGGTGAGATAGGCTGACAAGT
ATGTCCCTGATACCAAATACAGCAAATTGAAAAAACACACACAAGATGACATGATCTTACTAAA
TCATTTACTTGCTAGACTATCAGAGGGACTACCATACTCACCTATGATTACTGCAATCCTCTAA
TTCATAAATCTGAGTGGGATAATCTAAATTGATCAGTAGAATTTCTCAGGAAACTATGACCAAC
ACAAATAGGTGAGGTTATAAATCCTATTCCAAAACTATGAATGGAATTTGTTAATTTTTAGAGT
TCATGAAGATCTCATTTTAAGGTTCTGGCCTTTATAATTTAGCCCTTAATTATAAGCGTGCAAA
AAGCTTAGTAAGAGTAGTTTATTACTTATAAAACTCCAAGCCACCCATTAATCACAAAACTCAT
TACAATACTGATGGGTCAAAATACATGAATAGGTTTTTAGTTTGTATTTCAGTTGTTTACATGC
TAATTATCACTTAATTATAGACACTGTTTCCTTACAGCAAAGGCAAAATACAAGTACTAAGGTA
GTCCCCAAGCATTTGTATAATTAAGAACTGAAGAAGCGCCTCAGTTATTTTTGGTCCTGGGAAT
CAACGCCAGAGCCTTGCATATGTTCAGCAAGCATGTTCTGTTACTGAGCGACACTCCACAACCC
ACCTAGTTTCCCTCTATTGCTACATTTGACTGTTGGACAACACATGCACTCAAAAATTGCAACT
TTTTGTGTCGTATAAAAGCGTAAAATAATATGCTTCTCTTGCATATAAATACAGTCTAATGGGC
TTCCTCTCAATACTTCCTATTAAGGTTACAAATTAGTAGGAAAATAATAGTGCCTCCCACGGGT
TTGCGGACTTTTTAATTCTGGAGCCTGACAACAGACAGCAGGAGTGAATGAGAGAACCGACGCA
AACGCTGGCAAATGTTAATATGCTAGTCTGCCACGAAGAAATACTCAGATGTGAATTACACGTG
CCCGTGGCCTCAGACTCCACAGAGCTCCCTCTGGAAGCATCCAACTGGCCCCTGACCTAGGGAG
AAAAAGTCGGTCCACTGCACCATCACTGCAGGAAAGAGAGCGTAAAGCCAGCTCATACTCTGAT
AGATCTGACCGTCTTGCTCGCGCGCAGGCCTCGAACCGGAGCCCCTTCTGCACTCAGAGCGCCC
GAGCCTGCAGAAGTTCCGCAGCCAGGCTTCTACTCCGGCTCCTCAAGCGGCGCGTGGCCCCAAG
CCGCCAACAGCTCAAGGAGACCCCTCCAAGACCAAGTCTGCCCGGCCCCACCCATCGCACCCAC
GTGACCCATGCCACGCCCACAACCTCCACGTGACCCGGTCGGCCTCCGCGCGCAGCGTGGATCG
CGGCCAGAGCCGCCATTGTTCCGCCGGGGGAGGACAGCGAGGCCTGGCGCTGGCGCCCCGACGC
CACTTAGCGGCCGCCTCTGGAGACACTCTGTCCCCGCCGCCCCGTGTCCTCCTGGCGGCGGCGG
CGTGAGGCCGACTGGAGGGAGTGGGAACCCTCGGCCCTCCCCGTGGCGGCGGCGGCCACCTATT
CCCCACTCTGGAGTGAGGGGCGGCCGCGATGCGCTTGGCCTGAGGTGTCGCGGCCCTCGTCGCT
TCCCACGACTGTTCCAGCGGCGTCTGTGCTCCCCGGCGTCATCCCGAGAGTCTCTGACGGGAGG
GAAGATGGCTGCACGAAGCTGGCAGGACGAACTGGCTCAGCAGGCCGAGGAGGGCTCTGCCCGG
CTGCGGGAGTTGCTCTCTGTCGGCCTAGGTTTTCTGCGCACGGAGTTGGGCCTCGACCTGGGGT
TGGAGCCGAAGCGGTACCCGAGCTGGGTGATCCTGGTGGGCACCGGCGCTCTCGGGTTGCTGCT
TCTCTTCCTCCTAGGTTACGGCTGGGCCGCTGCTTGCGCCGGCGCCCGCAAAAAGCGAAGGAGC
CCGCCCCGCAAGCGGGAGGAGGTGACCCCGCCGACTCCGGCCCCCGAGGACCCAGCCCAACTGA
AGAATCTCAGAAGCGAGGAGCAAAAGAAAAAGAACCGGAAGAAGCTGCCTGAAAAGCCCAAACC
AAATGGACGGACTGTTGAAATACCTGAAGATGAAGTTGTTAGAACTCCCCGAAGTATAACTGCC
AAGCAGCCACCAGAGACAGACAAGAAAAATGAAAAGTCAAAGAAAAATAAGAAGAAGTCAAAGT
CAGATGCTAAAGCAGTGCAAAACAGTTCACGCCATGATGGAAAGGAAGTTGATGAAGGAGCCTG
GGAAACTAAAATTAGTCACAGAGAGAAACGACAACAGCGTAAACGTGATAAAGTGCTGACTGAT
TCTGGTTCATTGGATTCAACTATCCCTGGGATAGAAAATACCATCACAGTTACCACCGAGCAAC
TTACAACTGCATCATTTCCTGTTGGTTCCAAGAAGAATAAAGTTTCTTCAGGGTTGAATGAAAA
TATTACTGTCAATGGAGGAGGCTGGAGTGAAAAGTCTGTAAAACTCTCCTCACAATTGAGTGCA
GGTGAGGAGAAGTGGAACTCTGTCCCACCTGCTTCTGCAGGCAAGAGAAAAACAGAGCAGTCTG
CTTGGACTCAAGACCCTGGTGATACTAATGCAAATGGGAAAGACTGGGGAAGGAATTGGAGTGA
TCGCTCAATATTTTCTGGCATTGGATCTACTGCTGAGCCAGTTTCTCAGTCTACCACTTCTGAT
TATCAGTGGGATGGTAGCCGTAATCAGCCCCATATCGATGATGAATGGTCTGGGTTAAATGGTT
TGTCTTCTGCTGATCCTAGCTCAGACTGGAATGCACCAGCAGAAGAGTGGGGGAACTGGGTAGA
TGAAGATAGAGCTTCACTTCTGAAGTCCCAGGAGCCGATTTCTAATGATCAAAAGGATTCAGAT
GATGATAAGGAAAAAGGAGAAGGAGCTCTTCCAACTGGAAAATCTAAAAAGAAAAAAAAGAAAA
AGAAGAAGCAAGGTGAAGATAACTCTATCACCCAGGACACAGAAGACCTAGAAAAGGACACTAG
AGAAGAGCTTCCAGTGAATACCTCGAAAGCCCGTCCAAAACAGGAGAAAGCTTGTTCCCTGAAG
ACCATGAGCACTAGTGATCCAGTTGAAGTACTCATCAAAAATAGCCAGCCTATCAAGACTCTTC
CACCTGCTATCTCTGCCGAGCCATCTGTTACTTTATCAAAGGGTGACTCTGACAAGAGCTCTTC
CCAAGTGCCACCGATGTTACAAGACACAGACAAACCCAAGTCAAATGCTAAGCAAAACAGTGTG
CCTCCCTCACAGACCAAGTCTGAAACTAATTGGGAATCTCCAAAACAAATAAAAAAGAAGAAAA
AGGCCAGACGGGAAACGTGAATTTTTTTCCTAAATTGGACATGTGTTTACAAACACTGTCTTGA
AGATTATGCTGTTTATGCAATAATTTGTGAACATGTACAGAGTTTTATATAAATTTAAACCAAT
TTTTAAAACAAAACTGAACACAACCACCATAAAATGGAATCAAAGGAAAGTTAATTTATGAAAT
TAAGAGGTCAACAATACATACTACAGTGCTGGAAGACACTCGGGAGAGACTTTGCAATTGAACG
AGAATGATCATAATTTAAGAATATTATCCTGGTTTTACAACAGTTCCCTGTTTACAACAGATTG
TGCCCTGTTTCATCTGCAGCTGAGGAATAATGGATTCTGATTAGAGAGAAGGCTGCCTAGAAGC
CAGTAGGCAAGTCCTTGGATCTTATGCACGACCTTAGACCATTTGAATCTGTTTTATGCTTAAA
TCAAAGTGCTTTGATTAAATGCATACCTGCCATATCTTTACCTATTTGTTGTAGCAATTTGTAT
TAAAAGAATCACAAGTGCAAATAAAAGGTCATTTATCATTTATTTAACTAAACTGTCTTGGTTT
AGTTTACAGTTCTTTAAAAGTTCTAAATTAAAACATTGAAAAATGCAATTGACAGACACCTGTA
TGGCTTACAAAGTTATTTTTGATAGTCTTGCATTACTTGAATTATTCAAAGTAACAGTATATTT
TAAATTAAGAAAGGTAAATATATTATTTGTTTGATACATTAAGACTGAGACTAACAGTGCTCTT
GTTTATGATTTGAAAACTTTTCAGGCAAAATCCAACTTAATATTTTTCCTTTCCCTAGCAATTT
TCCAGTGTCAACTCTTAGTTGCTAGTAATTTTTTACCTTAAAAATAAAGTAATTCGCAACTTTT
GAGCATACGACGGAGAATGGAAAAGTAGTCAGACAGCTTTAATTGACATTGTGGAGACCTCCGG
TTATCAGGAATACATTTTTTTACTGCCTTAACCTCCTGTAGTGCGTAGAATATGCATCAATTTC
TTGAAGGGGATTCATGTTTTTATAAGAATTTTCATGTAACTATTGCAATTGTGGTCAAAAAAAG
GAACATTTTCTGCTTGAAACTGTGTTGATTTAAATGACGTATGATCTGTCACCATTTTCAGGCA
CTGTGTGATTCCTAGGAAAGTGGCAGGCCTCTCTGTAACTGTTAATAGTGCATGCTCGGCCATG
TACACTGTAAATAGCCTTTACCAAACGTGTTTGACAAGGACCATAATTAACATCACTTTAGTGA
ATTGTAATTTTAAAAAAGCCATGATTTATTGATGTGAGCGGCTTGTTTTCGTGTGGCGCCAGGA
ATGAACCTGTTTAAAAGCTATAACCAATGGTACTGATCTATCCATTAAATACTGTCCTTATATT
TGACTGTAGTTTAATAGTATTGTCAACTAGGAAAGCTACAAGATGTAAAATGGTTTTCGTTCTG
TTGAAGACTGGCCTTATTAATGGACAGCTTTCCTCAGAAGTGATTAACAACTTTTTTTATTGGG
TGTTAACATCTGTTTCAGGAACATGGCAGTATGTTTACATGTTGTCAGAAGTTTTGTTTGATTG
AATGGGATTTCTAAATTAACTTACTTGTTTAAATAAATTCAGAAATGGATAGCATTGTTTTTAT
TTGCTTCACTATTGGGGTAAATAATAGCTGATGTGCCAGGAATGGAGCCTTCAGATGGCTGCTG
TGAGCTTCATGTTCCCTCAGGGGATGCCACGCTATGTCTCAAGGAGAAGTTGATAGGGAGTCTG
TAATTACAGAGTGTGCCAAAAGGTCAGTGCTCACAAGTTTAATTGAACTCTCTCAACTCTACCT
CACTGTTCCTTTTCCTTATAATTCTCTGGGCTAGAACAAATAAGAAACTTTATTTTTCACTTCA
ATGTCTCCGGATGCAATCACTTATAGGAGGTGGCACCTACACCAGGTAGCAAGAATACCGTCTT
TTTGCAGAGGAATATATAATGGGGGGAAGCAGAGTGACACTGGGTGGGTCAGTGTGGAGGTGGC
CTCTATGCCTGCCTTCTCTCTGGCTTGCGAGCCAGGCAGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAGGAGGCAGGTATATGAGTGAAAATTAATC
ATTCACTGCTCTTTGCCTCTGTATAGATCTTTGTGTGGCAGGGCAGGGATTTCTTGTCACTGAT
CAGAGGAACTGGTTTCTGCCATCAACTCAGAAAACTCTGAGATTTAGGTAATGGTGATTAGAGA
GTGGCAACAGAAGACTGGGTATTCTCTGCTGGCCGGAATGAGGGCCCCTGATGCCACCTGTTTC
CCCAAAAGGCTCTCTGAAAAGCCTTTCTGTTGTGGGGCGGGGCATGGGCATGTCAGAGTTCTCC
AACTGCATTGTCCCTATCTTATACCCTAAATTGAGAAACAGTTGAGAGAGTCCAAAAAGAAAGT
TGAAATAAAATATCATTAATGTAATTTACCTTGTTTAATTTGTGCATGCATTTTATTGGGGAGG
GGAGGTTGGAATAATTTATCTAAAACTAATGGTATTATTTCATAGGCTAATCCAGTTTGTATTT
GAGTTAAAGATCCCAGAGGGTAGTAATTAATTACAGAGTTTAGTTTTTCTTAATTAAAAGCAGT
CCTCTATTAATATAGTATGAAATGTCAAAATTTAGGATTTAAGTTTAAGGTCTAATGGCTATTT
TAAAGTTTTTCTGTAAACTCATTGCACAAACTGGAATTGGAATTGCTTTCAAAAGACTTGGGAA
ATGAAAATGTGTCATGTAAGATGCACTGAGTGTTGTAAATAAAATACTGTTTTTGTTTTGTTTA
AAA

hide sequence

RefSeq Acc Id:

XM_006241524 ⟹ XP_006241586

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	67,192,592 - 67,250,819 (+)	NCBI
mRatBN7.2	7	65,306,464 - 65,365,647 (+)	NCBI
Rnor_6.0	7	72,771,021 - 72,830,599 (+)	NCBI
Rnor_5.0	7	72,938,130 - 72,997,298 (+)	NCBI

Sequence:

show sequence

ACAAAGTGCAGATGCATGTGCATACACAAAAAGGAGGGAGGAAGGGTGAGATAGGCTGACAAGT
ATGTCCCTGATACCAAATACAGCAAATTGAAAAAACACACACAAGATGACATGATCTTACTAAA
TCATTTACTTGCTAGACTATCAGAGGGACTACCATACTCACCTATGATTACTGCAATCCTCTAA
TTCATAAATCTGAGTGGGATAATCTAAATTGATCAGTAGAATTTCTCAGGAAACTATGACCAAC
ACAAATAGGTGAGGTTATAAATCCTATTCCAAAACTATGAATGGAATTTGTTAATTTTTAGAGT
TCATGAAGATCTCATTTTAAGGTTCTGGCCTTTATAATTTAGCCCTTAATTATAAGCGTGCAAA
AAGCTTAGTAAGAGTAGTTTATTACTTATAAAACTCCAAGCCACCCATTAATCACAAAACTCAT
TACAATACTGATGGGTCAAAATACATGAATAGGTTTTTAGTTTGTATTTCAGTTGTTTACATGC
TAATTATCACTTAATTATAGACACTGTTTCCTTACAGCAAAGGCAAAATACAAGTACTAAGGTA
GTCCCCAAGCATTTGTATAATTAAGAACTGAAGAAGCGCCTCAGTTATTTTTGGTCCTGGGAAT
CAACGCCAGAGCCTTGCATATGTTCAGCAAGCATGTTCTGTTACTGAGCGACACTCCACAACCC
ACCTAGTTTCCCTCTATTGCTACATTTGACTGTTGGACAACACATGCACTCAAAAATTGCAACT
TTTTGTGTCGTATAAAAGCGTAAAATAATATGCTTCTCTTGCATATAAATACAGTCTAATGGGC
TTCCTCTCAATACTTCCTATTAAGGTTACAAATTAGTAGGAAAATAATAGTGCCTCCCACGGGT
TTGCGGACTTTTTAATTCTGGAGCCTGACAACAGACAGCAGGAGTGAATGAGAGAACCGACGCA
AACGCTGGCAAATGTTAATATGCTAGTCTGCCACGAAGAAATACTCAGATGTGAATTACACGTG
CCCGTGGCCTCAGACTCCACAGAGCTCCCTCTGGAAGCATCCAACTGGCCCCTGACCTAGGGAG
AAAAAGTCGGTCCACTGCACCATCACTGCAGGAAAGAGAGCGTAAAGCCAGCTCATACTCTGAT
AGATCTGACCGTCTTGCTCGCGCGCAGGCCTCGAACCGGAGCCCCTTCTGCACTCAGAGCGCCC
GAGCCTGCAGAAGTTCCGCAGCCAGGCTTCTACTCCGGCTCCTCAAGCGGCGCGTGGCCCCAAG
CCGCCAACAGCTCAAGGAGACCCCTCCAAGACCAAGTCTGCCCGGCCCCACCCATCGCACCCAC
GTGACCCATGCCACGCCCACAACCTCCACGTGACCCGGTCGGCCTCCGCGCGCAGCGTGGATCG
CGGCCAGAGCCGCCATTGTTCCGCCGGGGGAGGACAGCGAGGCCTGGCGCTGGCGCCCCGACGC
CACTTAGCGGCCGCCTCTGGAGACACTCTGTCCCCGCCGCCCCGTGTCCTCCTGGCGGCGGCGG
CGTGAGGCCGACTGGAGGGAGTGGGAACCCTCGGCCCTCCCCGTGGCGGCGGCGGCCACCTATT
CCCCACTCTGGAGTGAGGGGCGGCCGCGATGCGCTTGGCCTGAGGTGTCGCGGCCCTCGTCGCT
TCCCACGACTGTTCCAGCGGCGTCTGTGCTCCCCGGCGTCATCCCGAGAGTCTCTGACGGGAGG
GAAGATGGCTGCACGAAGCTGGCAGGACGAACTGGCTCAGCAGGCCGAGGAGGGCTCTGCCCGG
CTGCGGGAGTTGCTCTCTGTCGGCCTAGGTTTTCTGCGCACGGAGTTGGGCCTCGACCTGGGGT
TGGAGCCGAAGCGGTACCCGAGCTGGGTGATCCTGGTGGGCACCGGCGCTCTCGGGTTGCTGCT
TCTCTTCCTCCTAGGTTACGGCTGGGCCGCTGCTTGCGCCGGCGCCCGCAAAAAGCGAAGGAGC
CCGCCCCGCAAGCGGGAGGAGGTGACCCCGCCGACTCCGGCCCCCGAGGACCCAGCCCAACTGA
AGAATCTCAGAAGCGAGGAGCAAAAGAAAAAGAACCGGAAGAAGCTGCCTGAAAAGCCCAAACC
AAATGGACGGACTGTTGAAATACCTGAAGATGAAGTTGTTAGAACTCCCCGAAGTATAACTGCC
AAGCAGCCACCAGAGACAGACAAGAAAAATGAAAAGTCAAAGAAAAATAAGAAGAAGTCAAAGT
CAGATGCTAAAGCAGTGCAAAACAGTTCACGCCATGATGGAAAGGAAGTTGATGAAGGAGCCTG
GGAAACTAAAATTAGTCACAGAGAGAAACGACAACAGCGTAAACGTGATAAAGTGCTGACTGAT
TCTGGTTCATTGGATTCAACTATCCCTGGGATAGAAAATACCATCACAGTTACCACCGAGCAAC
TTACAACTGCATCATTTCCTGTTGGTTCCAAGAAGAATAAAGGTGATTCTCATCTAAATGTTCA
AGTTAGCAACTTTAAGTCTGGAAAAGGAGATTCTACACTTCAGGTTTCTTCAGGGTTGAATGAA
AATATTACTGTCAATGGAGGAGGCTGGAGTGAAAAGTCTGTAAAACTCTCCTCACAATTGAGTG
CAGGTGAGGAGAAGTGGAACTCTGTCCCACCTGCTTCTGCAGGCAAGAGAAAAACAGAGCAGTC
TGCTTGGACTCAAGACCCTGGTGATACTAATGCAAATGGGAAAGACTGGGGAAGGAATTGGAGT
GATCGCTCAATATTTTCTGGCATTGATGGTTTGTCTTCTGCTGATCCTAGCTCAGACTGGAATG
CACCAGCAGAAGAGTGGGGGAACTGGGTAGATGAAGATAGAGCTTCACTTCTGAAGTCCCAGGA
GCCGATTTCTAATGATCAAAAGGATTCAGATGATGATAAGGAAAAAGGAGAAGGAGCTCTTCCA
ACTGGAAAATCTAAAAAGAAAAAAAAGAAAAAGAAGAAGCAAGGTGAAGATAACTCTATCACCC
AGGACACAGAAGACCTAGAAAAGGACACTAGAGAAGAGCTTCCAGTGAATACCTCGAAAGCCCG
TCCAAAACAGGAGAAAGCTTGTTCCCTGAAGACCATGAGCACTAGTGATCCAGTTGAAGTACTC
ATCAAAAATAGCCAGCCTATCAAGACTCTTCCACCTGCTATCTCTGCCGAGCCATCTGTTACTT
TATCAAAGGGTGACTCTGACAAGAGCTCTTCCCAAGTGCCACCGATGTTACAAGACACAGACAA
ACCCAAGTCAAATGCTAAGCAAAACAGTGTGCCTCCCTCACAGACCAAGTCTGAAACTAATTGG
GAATCTCCAAAACAAATAAAAAAGAAGAAAAAGGCCAGACGGGAAACGTGAATTTTTTTCCTAA
ATTGGACATGTGTTTACAAACACTGTCTTGAAGATTATGCTGTTTATGCAATAATTTGTGAACA
TGTACAGAGTTTTATATAAATTTAAACCAATTTTTAAAACAAAACTGAACACAACCACCATAAA
ATGGAATCAAAGGAAAGTTAATTTATGAAATTAAGAGGTCAACAATACATACTACAGTGCTGGA
AGACACTCGGGAGAGACTTTGCAATTGAACGAGAATGATCATAATTTAAGAATATTATCCTGGT
TTTACAACAGTTCCCTGTTTACAACAGATTGTGCCCTGTTTCATCTGCAGCTGAGGAATAATGG
ATTCTGATTAGAGAGAAGGCTGCCTAGAAGCCAGTAGGCAAGTCCTTGGATCTTATGCACGACC
TTAGACCATTTGAATCTGTTTTATGCTTAAATCAAAGTGCTTTGATTAAATGCATACCTGCCAT
ATCTTTACCTATTTGTTGTAGCAATTTGTATTAAAAGAATCACAAGTGCAAATAAAAGGTCATT
TATCATTTATTTAACTAAACTGTCTTGGTTTAGTTTACAGTTCTTTAAAAGTTCTAAATTAAAA
CATTGAAAAATGCAATTGACAGACACCTGTATGGCTTACAAAGTTATTTTTGATAGTCTTGCAT
TACTTGAATTATTCAAAGTAACAGTATATTTTAAATTAAGAAAGGTAAATATATTATTTGTTTG
ATACATTAAGACTGAGACTAACAGTGCTCTTGTTTATGATTTGAAAACTTTTCAGGCAAAATCC
AACTTAATATTTTTCCTTTCCCTAGCAATTTTCCAGTGTCAACTCTTAGTTGCTAGTAATTTTT
TACCTTAAAAATAAAGTAATTCGCAACTTTTGAGCATACGACGGAGAATGGAAAAGTAGTCAGA
CAGCTTTAATTGACATTGTGGAGACCTCCGGTTATCAGGAATACATTTTTTTACTGCCTTAACC
TCCTGTAGTGCGTAGAATATGCATCAATTTCTTGAAGGGGATTCATGTTTTTATAAGAATTTTC
ATGTAACTATTGCAATTGTGGTCAAAAAAAGGAACATTTTCTGCTTGAAACTGTGTTGATTTAA
ATGACGTATGATCTGTCACCATTTTCAGGCACTGTGTGATTCCTAGGAAAGTGGCAGGCCTCTC
TGTAACTGTTAATAGTGCATGCTCGGCCATGTACACTGTAAATAGCCTTTACCAAACGTGTTTG
ACAAGGACCATAATTAACATCACTTTAGTGAATTGTAATTTTAAAAAAGCCATGATTTATTGAT
GTGAGCGGCTTGTTTTCGTGTGGCGCCAGGAATGAACCTGTTTAAAAGCTATAACCAATGGTAC
TGATCTATCCATTAAATACTGTCCTTATATTTGACTGTAGTTTAATAGTATTGTCAACTAGGAA
AGCTACAAGATGTAAAATGGTTTTCGTTCTGTTGAAGACTGGCCTTATTAATGGACAGCTTTCC
TCAGAAGTGATTAACAACTTTTTTTATTGGGTGTTAACATCTGTTTCAGGAACATGGCAGTATG
TTTACATGTTGTCAGAAGTTTTGTTTGATTGAATGGGATTTCTAAATTAACTTACTTGTTTAAA
TAAATTCAGAAATGGATAGCATTGTTTTTATTTGCTTCACTATTGGGGTAAATAATAGCTGATG
TGCCAGGAATGGAGCCTTCAGATGGCTGCTGTGAGCTTCATGTTCCCTCAGGGGATGCCACGCT
ATGTCTCAAGGAGAAGTTGATAGGGAGTCTGTAATTACAGAGTGTGCCAAAAGGTCAGTGCTCA
CAAGTTTAATTGAACTCTCTCAACTCTACCTCACTGTTCCTTTTCCTTATAATTCTCTGGGCTA
GAACAAATAAGAAACTTTATTTTTCACTTCAATGTCTCCGGATGCAATCACTTATAGGAGGTGG
CACCTACACCAGGTAGCAAGAATACCGTCTTTTTGCAGAGGAATATATAATGGGGGGAAGCAGA
GTGACACTGGGTGGGTCAGTGTGGAGGTGGCCTCTATGCCTGCCTTCTCTCTGGCTTGCGAGCC
AGGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
AAGGAGGCAGGTATATGAGTGAAAATTAATCATTCACTGCTCTTTGCCTCTGTATAGATCTTTG
TGTGGCAGGGCAGGGATTTCTTGTCACTGATCAGAGGAACTGGTTTCTGCCATCAACTCAGAAA
ACTCTGAGATTTAGGTAATGGTGATTAGAGAGTGGCAACAGAAGACTGGGTATTCTCTGCTGGC
CGGAATGAGGGCCCCTGATGCCACCTGTTTCCCCAAAAGGCTCTCTGAAAAGCCTTTCTGTTGT
GGGGCGGGGCATGGGCATGTCAGAGTTCTCCAACTGCATTGTCCCTATCTTATACCCTAAATTG
AGAAACAGTTGAGAGAGTCCAAAAAGAAAGTTGAAATAAAATATCATTAATGTAATTTACCTTG
TTTAATTTGTGCATGCATTTTATTGGGGAGGGGAGGTTGGAATAATTTATCTAAAACTAATGGT
ATTATTTCATAGGCTAATCCAGTTTGTATTTGAGTTAAAGATCCCAGAGGGTAGTAATTAATTA
CAGAGTTTAGTTTTTCTTAATTAAAAGCAGTCCTCTATTAATATAGTATGAAATGTCAAAATTT
AGGATTTAAGTTTAAGGTCTAATGGCTATTTTAAAGTTTTTCTGTAAACTCATTGCACAAACTG
GAATTGGAATTGCTTTCAAAAGACTTGGGAAATGAAAATGTGTCATGTAAGATGCACTGAGTGT
TGTAAATAAAATACTGTTTTTGTTTTGTTTAAAA

hide sequence

RefSeq Acc Id:

XM_006241525 ⟹ XP_006241587

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	67,192,592 - 67,250,819 (+)	NCBI
mRatBN7.2	7	65,306,464 - 65,365,647 (+)	NCBI
Rnor_6.0	7	72,771,021 - 72,830,599 (+)	NCBI
Rnor_5.0	7	72,938,130 - 72,997,298 (+)	NCBI

Sequence:

show sequence

ACAAAGTGCAGATGCATGTGCATACACAAAAAGGAGGGAGGAAGGGTGAGATAGGCTGACAAGT
ATGTCCCTGATACCAAATACAGCAAATTGAAAAAACACACACAAGATGACATGATCTTACTAAA
TCATTTACTTGCTAGACTATCAGAGGGACTACCATACTCACCTATGATTACTGCAATCCTCTAA
TTCATAAATCTGAGTGGGATAATCTAAATTGATCAGTAGAATTTCTCAGGAAACTATGACCAAC
ACAAATAGGTGAGGTTATAAATCCTATTCCAAAACTATGAATGGAATTTGTTAATTTTTAGAGT
TCATGAAGATCTCATTTTAAGGTTCTGGCCTTTATAATTTAGCCCTTAATTATAAGCGTGCAAA
AAGCTTAGTAAGAGTAGTTTATTACTTATAAAACTCCAAGCCACCCATTAATCACAAAACTCAT
TACAATACTGATGGGTCAAAATACATGAATAGGTTTTTAGTTTGTATTTCAGTTGTTTACATGC
TAATTATCACTTAATTATAGACACTGTTTCCTTACAGCAAAGGCAAAATACAAGTACTAAGGTA
GTCCCCAAGCATTTGTATAATTAAGAACTGAAGAAGCGCCTCAGTTATTTTTGGTCCTGGGAAT
CAACGCCAGAGCCTTGCATATGTTCAGCAAGCATGTTCTGTTACTGAGCGACACTCCACAACCC
ACCTAGTTTCCCTCTATTGCTACATTTGACTGTTGGACAACACATGCACTCAAAAATTGCAACT
TTTTGTGTCGTATAAAAGCGTAAAATAATATGCTTCTCTTGCATATAAATACAGTCTAATGGGC
TTCCTCTCAATACTTCCTATTAAGGTTACAAATTAGTAGGAAAATAATAGTGCCTCCCACGGGT
TTGCGGACTTTTTAATTCTGGAGCCTGACAACAGACAGCAGGAGTGAATGAGAGAACCGACGCA
AACGCTGGCAAATGTTAATATGCTAGTCTGCCACGAAGAAATACTCAGATGTGAATTACACGTG
CCCGTGGCCTCAGACTCCACAGAGCTCCCTCTGGAAGCATCCAACTGGCCCCTGACCTAGGGAG
AAAAAGTCGGTCCACTGCACCATCACTGCAGGAAAGAGAGCGTAAAGCCAGCTCATACTCTGAT
AGATCTGACCGTCTTGCTCGCGCGCAGGCCTCGAACCGGAGCCCCTTCTGCACTCAGAGCGCCC
GAGCCTGCAGAAGTTCCGCAGCCAGGCTTCTACTCCGGCTCCTCAAGCGGCGCGTGGCCCCAAG
CCGCCAACAGCTCAAGGAGACCCCTCCAAGACCAAGTCTGCCCGGCCCCACCCATCGCACCCAC
GTGACCCATGCCACGCCCACAACCTCCACGTGACCCGGTCGGCCTCCGCGCGCAGCGTGGATCG
CGGCCAGAGCCGCCATTGTTCCGCCGGGGGAGGACAGCGAGGCCTGGCGCTGGCGCCCCGACGC
CACTTAGCGGCCGCCTCTGGAGACACTCTGTCCCCGCCGCCCCGTGTCCTCCTGGCGGCGGCGG
CGTGAGGCCGACTGGAGGGAGTGGGAACCCTCGGCCCTCCCCGTGGCGGCGGCGGCCACCTATT
CCCCACTCTGGAGTGAGGGGCGGCCGCGATGCGCTTGGCCTGAGGTGTCGCGGCCCTCGTCGCT
TCCCACGACTGTTCCAGCGGCGTCTGTGCTCCCCGGCGTCATCCCGAGAGTCTCTGACGGGAGG
GAAGATGGCTGCACGAAGCTGGCAGGACGAACTGGCTCAGCAGGCCGAGGAGGGCTCTGCCCGG
CTGCGGGAGTTGCTCTCTGTCGGCCTAGGTTTTCTGCGCACGGAGTTGGGCCTCGACCTGGGGT
TGGAGCCGAAGCGGTACCCGAGCTGGGTGATCCTGGTGGGCACCGGCGCTCTCGGGTTGCTGCT
TCTCTTCCTCCTAGGTTACGGCTGGGCCGCTGCTTGCGCCGGCGCCCGCAAAAAGCGAAGGAGC
CCGCCCCGCAAGCGGGAGGAGGTGACCCCGCCGACTCCGGCCCCCGAGGACCCAGCCCAACTGA
AGAATCTCAGAAGCGAGGAGCAAAAGAAAAAGAACCGGAAGAAGCTGCCTGAAAAGCCCAAACC
AAATGGACGGACTGTTGAAATACCTGAAGATGAAGTTGTTAGAACTCCCCGAAGTATAACTGCC
AAGCAGCCACCAGAGACAGACAAGAAAAATGAAAAGTCAAAGAAAAATAAGAAGAAGTCAAAGT
CAGATGCTAAAGCAGTGCAAAACAGTTCACGCCATGATGGAAAGGAAGTTGATGAAGGAGCCTG
GGAAACTAAAATTAGTCACAGAGAGAAACGACAACAGCGTAAACGTGATAAAGTGCTGACTGAT
TCTGGTTCATTGGATTCAACTATCCCTGGGATAGAAAATACCATCACAGTTACCACCGAGCAAC
TTACAACTGCATCATTTCCTGTTGGTTCCAAGAAGAATAAAGTTTCTTCAGGGTTGAATGAAAA
TATTACTGTCAATGGAGGAGGCTGGAGTGAAAAGTCTGTAAAACTCTCCTCACAATTGAGTGCA
GGTGAGGAGAAGTGGAACTCTGTCCCACCTGCTTCTGCAGGCAAGAGAAAAACAGAGCAGTCTG
CTTGGACTCAAGACCCTGGTGATACTAATGCAAATGGGAAAGACTGGGGAAGGAATTGGAGTGA
TCGCTCAATATTTTCTGGCATTGATGGTTTGTCTTCTGCTGATCCTAGCTCAGACTGGAATGCA
CCAGCAGAAGAGTGGGGGAACTGGGTAGATGAAGATAGAGCTTCACTTCTGAAGTCCCAGGAGC
CGATTTCTAATGATCAAAAGGATTCAGATGATGATAAGGAAAAAGGAGAAGGAGCTCTTCCAAC
TGGAAAATCTAAAAAGAAAAAAAAGAAAAAGAAGAAGCAAGGTGAAGATAACTCTATCACCCAG
GACACAGAAGACCTAGAAAAGGACACTAGAGAAGAGCTTCCAGTGAATACCTCGAAAGCCCGTC
CAAAACAGGAGAAAGCTTGTTCCCTGAAGACCATGAGCACTAGTGATCCAGTTGAAGTACTCAT
CAAAAATAGCCAGCCTATCAAGACTCTTCCACCTGCTATCTCTGCCGAGCCATCTGTTACTTTA
TCAAAGGGTGACTCTGACAAGAGCTCTTCCCAAGTGCCACCGATGTTACAAGACACAGACAAAC
CCAAGTCAAATGCTAAGCAAAACAGTGTGCCTCCCTCACAGACCAAGTCTGAAACTAATTGGGA
ATCTCCAAAACAAATAAAAAAGAAGAAAAAGGCCAGACGGGAAACGTGAATTTTTTTCCTAAAT
TGGACATGTGTTTACAAACACTGTCTTGAAGATTATGCTGTTTATGCAATAATTTGTGAACATG
TACAGAGTTTTATATAAATTTAAACCAATTTTTAAAACAAAACTGAACACAACCACCATAAAAT
GGAATCAAAGGAAAGTTAATTTATGAAATTAAGAGGTCAACAATACATACTACAGTGCTGGAAG
ACACTCGGGAGAGACTTTGCAATTGAACGAGAATGATCATAATTTAAGAATATTATCCTGGTTT
TACAACAGTTCCCTGTTTACAACAGATTGTGCCCTGTTTCATCTGCAGCTGAGGAATAATGGAT
TCTGATTAGAGAGAAGGCTGCCTAGAAGCCAGTAGGCAAGTCCTTGGATCTTATGCACGACCTT
AGACCATTTGAATCTGTTTTATGCTTAAATCAAAGTGCTTTGATTAAATGCATACCTGCCATAT
CTTTACCTATTTGTTGTAGCAATTTGTATTAAAAGAATCACAAGTGCAAATAAAAGGTCATTTA
TCATTTATTTAACTAAACTGTCTTGGTTTAGTTTACAGTTCTTTAAAAGTTCTAAATTAAAACA
TTGAAAAATGCAATTGACAGACACCTGTATGGCTTACAAAGTTATTTTTGATAGTCTTGCATTA
CTTGAATTATTCAAAGTAACAGTATATTTTAAATTAAGAAAGGTAAATATATTATTTGTTTGAT
ACATTAAGACTGAGACTAACAGTGCTCTTGTTTATGATTTGAAAACTTTTCAGGCAAAATCCAA
CTTAATATTTTTCCTTTCCCTAGCAATTTTCCAGTGTCAACTCTTAGTTGCTAGTAATTTTTTA
CCTTAAAAATAAAGTAATTCGCAACTTTTGAGCATACGACGGAGAATGGAAAAGTAGTCAGACA
GCTTTAATTGACATTGTGGAGACCTCCGGTTATCAGGAATACATTTTTTTACTGCCTTAACCTC
CTGTAGTGCGTAGAATATGCATCAATTTCTTGAAGGGGATTCATGTTTTTATAAGAATTTTCAT
GTAACTATTGCAATTGTGGTCAAAAAAAGGAACATTTTCTGCTTGAAACTGTGTTGATTTAAAT
GACGTATGATCTGTCACCATTTTCAGGCACTGTGTGATTCCTAGGAAAGTGGCAGGCCTCTCTG
TAACTGTTAATAGTGCATGCTCGGCCATGTACACTGTAAATAGCCTTTACCAAACGTGTTTGAC
AAGGACCATAATTAACATCACTTTAGTGAATTGTAATTTTAAAAAAGCCATGATTTATTGATGT
GAGCGGCTTGTTTTCGTGTGGCGCCAGGAATGAACCTGTTTAAAAGCTATAACCAATGGTACTG
ATCTATCCATTAAATACTGTCCTTATATTTGACTGTAGTTTAATAGTATTGTCAACTAGGAAAG
CTACAAGATGTAAAATGGTTTTCGTTCTGTTGAAGACTGGCCTTATTAATGGACAGCTTTCCTC
AGAAGTGATTAACAACTTTTTTTATTGGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTT
TACATGTTGTCAGAAGTTTTGTTTGATTGAATGGGATTTCTAAATTAACTTACTTGTTTAAATA
AATTCAGAAATGGATAGCATTGTTTTTATTTGCTTCACTATTGGGGTAAATAATAGCTGATGTG
CCAGGAATGGAGCCTTCAGATGGCTGCTGTGAGCTTCATGTTCCCTCAGGGGATGCCACGCTAT
GTCTCAAGGAGAAGTTGATAGGGAGTCTGTAATTACAGAGTGTGCCAAAAGGTCAGTGCTCACA
AGTTTAATTGAACTCTCTCAACTCTACCTCACTGTTCCTTTTCCTTATAATTCTCTGGGCTAGA
ACAAATAAGAAACTTTATTTTTCACTTCAATGTCTCCGGATGCAATCACTTATAGGAGGTGGCA
CCTACACCAGGTAGCAAGAATACCGTCTTTTTGCAGAGGAATATATAATGGGGGGAAGCAGAGT
GACACTGGGTGGGTCAGTGTGGAGGTGGCCTCTATGCCTGCCTTCTCTCTGGCTTGCGAGCCAG
GCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAA
GGAGGCAGGTATATGAGTGAAAATTAATCATTCACTGCTCTTTGCCTCTGTATAGATCTTTGTG
TGGCAGGGCAGGGATTTCTTGTCACTGATCAGAGGAACTGGTTTCTGCCATCAACTCAGAAAAC
TCTGAGATTTAGGTAATGGTGATTAGAGAGTGGCAACAGAAGACTGGGTATTCTCTGCTGGCCG
GAATGAGGGCCCCTGATGCCACCTGTTTCCCCAAAAGGCTCTCTGAAAAGCCTTTCTGTTGTGG
GGCGGGGCATGGGCATGTCAGAGTTCTCCAACTGCATTGTCCCTATCTTATACCCTAAATTGAG
AAACAGTTGAGAGAGTCCAAAAAGAAAGTTGAAATAAAATATCATTAATGTAATTTACCTTGTT
TAATTTGTGCATGCATTTTATTGGGGAGGGGAGGTTGGAATAATTTATCTAAAACTAATGGTAT
TATTTCATAGGCTAATCCAGTTTGTATTTGAGTTAAAGATCCCAGAGGGTAGTAATTAATTACA
GAGTTTAGTTTTTCTTAATTAAAAGCAGTCCTCTATTAATATAGTATGAAATGTCAAAATTTAG
GATTTAAGTTTAAGGTCTAATGGCTATTTTAAAGTTTTTCTGTAAACTCATTGCACAAACTGGA
ATTGGAATTGCTTTCAAAAGACTTGGGAAATGAAAATGTGTCATGTAAGATGCACTGAGTGTTG
TAAATAAAATACTGTTTTTGTTTTGTTTAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001424897	(Get FASTA)	NCBI Sequence Viewer
	NP_001424898	(Get FASTA)	NCBI Sequence Viewer
	NP_596889	(Get FASTA)	NCBI Sequence Viewer
	XP_006241582	(Get FASTA)	NCBI Sequence Viewer
	XP_006241583	(Get FASTA)	NCBI Sequence Viewer
	XP_006241585	(Get FASTA)	NCBI Sequence Viewer
	XP_006241586	(Get FASTA)	NCBI Sequence Viewer
	XP_006241587	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAC72405	(Get FASTA)	NCBI Sequence Viewer
	EDM16428	(Get FASTA)	NCBI Sequence Viewer
	EDM16429	(Get FASTA)	NCBI Sequence Viewer
	EDM16430	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000009989
	ENSRNOP00000077252
	ENSRNOP00000078672
	ENSRNOP00000088806
GenBank Protein	Q9Z1W6	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_596889 ⟸ NM_133398

- UniProtKB:

Q9Z1W6 (UniProtKB/Swiss-Prot), A0A8L2UIC6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAARSWQDELAQQAEEGSARLRELLSVGLGFLRTELGLDLGLEPKRYPSWVILVGTGALGLLLL
FLLGYGWAAACAGARKKRRSPPRKREEVTPPTPAPEDPAQLKNLRSEEQKKKNRKKLPEKPKPN
GRTVEIPEDEVVRTPRSITAKQPPETDKKNEKSKKNKKKSKSDAKAVQNSSRHDGKEVDEGAWE
TKISHREKRQQRKRDKVLTDSGSLDSTIPGIENTITVTTEQLTTASFPVGSKKNKGDSHLNVQV
SNFKSGKGDSTLQVSSGLNENITVNGGGWSEKSVKLSSQLSAGEEKWNSVPPASAGKRKTEQSA
WTQDPGDTNANGKDWGRNWSDRSIFSGIGSTAEPVSQSTTSDYQWDGSRNQPHIDDEWSGLNGL
SSADPSSDWNAPAEEWGNWVDEDRASLLKSQEPISNDQKDSDDDKEKGEGALPTGKSKKKKKKK
KKQGEDNSITQDTEDLEKDTREELPVNTSKARPKQEKACSLKTMSTSDPVEVLIKNSQPIKTLP
PAISAEPSVTLSKGDSDKSSSQVPPMLQDTDKPKSNAKQNSVPPSQTKSETNWESPKQIKKKKK
ARRET

hide sequence

RefSeq Acc Id:	XP_006241582 ⟸ XM_006241520
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5Y7K9 (UniProtKB/TrEMBL), A6HQZ2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPRPQPPRDPVGLRAQRGSRPEPPLFRRGRTARPGAGAPTPLSGRLWRHSVPAAPCPPGGGGVR PTGGSGNPRPSPWRRRPPIPHSGVRGGRDALGLRCRGPRRFPRLFQRRLCSPASSRESLTGGKM AARSWQDELAQQAEEGSARLRELLSVGLGFLRTELGLDLGLEPKRYPSWVILVGTGALGLLLLF LLGYGWAAACAGARKKRRSPPRKREEVTPPTPAPEDPAQLKNLRSEEQKKKNRKKLPEKPKPNG RTVEIPEDEVVRTPRSITAKQPPETDKKNEKSKKNKKKSKSDAKAVQNSSRHDGKEVDEGAWET KISHREKRQQRKRDKVLTDSGSLDSTIPGIENTITVTTEQLTTASFPVGSKKNKGDSHLNVQVS NFKSGKGDSTLQVSSGLNENITVNGGGWSEKSVKLSSQLSAGEEKWNSVPPASAGKRKTEQSAW TQDPGDTNANGKDWGRNWSDRSIFSGIAAWSSVARGVSASQQNSASFASLTLNSAVSGSTAEPV SQSTTSDYQWDGSRNQPHIDDEWSGLNGLSSADPSSDWNAPAEEWGNWVDEDRASLLKSQEPIS NDQKDSDDDKEKGEGALPTGKSKKKKKKKKKQGEDNSITQDTEDLEKDTREELPVNTSKARPKQ EKACSLKTMSTSDPVEVLIKNSQPIKTLPPAISAEPSVTLSKGDSDKSSSQVPPMLQDTDKPKS NAKQNSVPPSQTKSETNWESPKQIKKKKKARRET hide sequence

RefSeq Acc Id:	XP_006241583 ⟸ XM_006241521
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZLQ8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPRPQPPRDPVGLRAQRGSRPEPPLFRRGRTARPGAGAPTPLSGRLWRHSVPAAPCPPGGGGVR PTGGSGNPRPSPWRRRPPIPHSGVRGGRDALGLRCRGPRRFPRLFQRRLCSPASSRESLTGGKM AARSWQDELAQQAEEGSARLRELLSVGLGFLRTELGLDLGLEPKRYPSWVILVGTGALGLLLLF LLGYGWAAACAGARKKRRSPPRKREEVTPPTPAPEDPAQLKNLRSEEQKKKNRKKLPEKPKPNG RTVEIPEDEVVRTPRSITAKQPPETDKKNEKSKKNKKKSKSDAKAVQNSSRHDGKEVDEGAWET KISHREKRQQRKRDKVLTDSGSLDSTIPGIENTITVTTEQLTTASFPVGSKKNKVSSGLNENIT VNGGGWSEKSVKLSSQLSAGEEKWNSVPPASAGKRKTEQSAWTQDPGDTNANGKDWGRNWSDRS IFSGIAAWSSVARGVSASQQNSASFASLTLNSAVSGSTAEPVSQSTTSDYQWDGSRNQPHIDDE WSGLNGLSSADPSSDWNAPAEEWGNWVDEDRASLLKSQEPISNDQKDSDDDKEKGEGALPTGKS KKKKKKKKKQGEDNSITQDTEDLEKDTREELPVNTSKARPKQEKACSLKTMSTSDPVEVLIKNS QPIKTLPPAISAEPSVTLSKGDSDKSSSQVPPMLQDTDKPKSNAKQNSVPPSQTKSETNWESPK QIKKKKKARRET hide sequence

RefSeq Acc Id:

XP_006241586 ⟸ XM_006241524

- Peptide Label:

isoform X4

- Sequence:

show sequence

MPRPQPPRDPVGLRAQRGSRPEPPLFRRGRTARPGAGAPTPLSGRLWRHSVPAAPCPPGGGGVR
PTGGSGNPRPSPWRRRPPIPHSGVRGGRDALGLRCRGPRRFPRLFQRRLCSPASSRESLTGGKM
AARSWQDELAQQAEEGSARLRELLSVGLGFLRTELGLDLGLEPKRYPSWVILVGTGALGLLLLF
LLGYGWAAACAGARKKRRSPPRKREEVTPPTPAPEDPAQLKNLRSEEQKKKNRKKLPEKPKPNG
RTVEIPEDEVVRTPRSITAKQPPETDKKNEKSKKNKKKSKSDAKAVQNSSRHDGKEVDEGAWET
KISHREKRQQRKRDKVLTDSGSLDSTIPGIENTITVTTEQLTTASFPVGSKKNKGDSHLNVQVS
NFKSGKGDSTLQVSSGLNENITVNGGGWSEKSVKLSSQLSAGEEKWNSVPPASAGKRKTEQSAW
TQDPGDTNANGKDWGRNWSDRSIFSGIDGLSSADPSSDWNAPAEEWGNWVDEDRASLLKSQEPI
SNDQKDSDDDKEKGEGALPTGKSKKKKKKKKKQGEDNSITQDTEDLEKDTREELPVNTSKARPK
QEKACSLKTMSTSDPVEVLIKNSQPIKTLPPAISAEPSVTLSKGDSDKSSSQVPPMLQDTDKPK
SNAKQNSVPPSQTKSETNWESPKQIKKKKKARRET

hide sequence

RefSeq Acc Id:

XP_006241585 ⟸ XM_006241523

- Peptide Label:

isoform X3

- Sequence:

show sequence

MPRPQPPRDPVGLRAQRGSRPEPPLFRRGRTARPGAGAPTPLSGRLWRHSVPAAPCPPGGGGVR
PTGGSGNPRPSPWRRRPPIPHSGVRGGRDALGLRCRGPRRFPRLFQRRLCSPASSRESLTGGKM
AARSWQDELAQQAEEGSARLRELLSVGLGFLRTELGLDLGLEPKRYPSWVILVGTGALGLLLLF
LLGYGWAAACAGARKKRRSPPRKREEVTPPTPAPEDPAQLKNLRSEEQKKKNRKKLPEKPKPNG
RTVEIPEDEVVRTPRSITAKQPPETDKKNEKSKKNKKKSKSDAKAVQNSSRHDGKEVDEGAWET
KISHREKRQQRKRDKVLTDSGSLDSTIPGIENTITVTTEQLTTASFPVGSKKNKVSSGLNENIT
VNGGGWSEKSVKLSSQLSAGEEKWNSVPPASAGKRKTEQSAWTQDPGDTNANGKDWGRNWSDRS
IFSGIGSTAEPVSQSTTSDYQWDGSRNQPHIDDEWSGLNGLSSADPSSDWNAPAEEWGNWVDED
RASLLKSQEPISNDQKDSDDDKEKGEGALPTGKSKKKKKKKKKQGEDNSITQDTEDLEKDTREE
LPVNTSKARPKQEKACSLKTMSTSDPVEVLIKNSQPIKTLPPAISAEPSVTLSKGDSDKSSSQV
PPMLQDTDKPKSNAKQNSVPPSQTKSETNWESPKQIKKKKKARRET

hide sequence

RefSeq Acc Id:	XP_006241587 ⟸ XM_006241525
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6AJK9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPRPQPPRDPVGLRAQRGSRPEPPLFRRGRTARPGAGAPTPLSGRLWRHSVPAAPCPPGGGGVR PTGGSGNPRPSPWRRRPPIPHSGVRGGRDALGLRCRGPRRFPRLFQRRLCSPASSRESLTGGKM AARSWQDELAQQAEEGSARLRELLSVGLGFLRTELGLDLGLEPKRYPSWVILVGTGALGLLLLF LLGYGWAAACAGARKKRRSPPRKREEVTPPTPAPEDPAQLKNLRSEEQKKKNRKKLPEKPKPNG RTVEIPEDEVVRTPRSITAKQPPETDKKNEKSKKNKKKSKSDAKAVQNSSRHDGKEVDEGAWET KISHREKRQQRKRDKVLTDSGSLDSTIPGIENTITVTTEQLTTASFPVGSKKNKVSSGLNENIT VNGGGWSEKSVKLSSQLSAGEEKWNSVPPASAGKRKTEQSAWTQDPGDTNANGKDWGRNWSDRS IFSGIDGLSSADPSSDWNAPAEEWGNWVDEDRASLLKSQEPISNDQKDSDDDKEKGEGALPTGK SKKKKKKKKKQGEDNSITQDTEDLEKDTREELPVNTSKARPKQEKACSLKTMSTSDPVEVLIKN SQPIKTLPPAISAEPSVTLSKGDSDKSSSQVPPMLQDTDKPKSNAKQNSVPPSQTKSETNWESP KQIKKKKKARRET hide sequence

Ensembl Acc Id:

ENSRNOP00000009989 ⟸ ENSRNOT00000009989

Ensembl Acc Id:

ENSRNOP00000078672 ⟸ ENSRNOT00000108860

Ensembl Acc Id:

ENSRNOP00000088806 ⟸ ENSRNOT00000105848

Ensembl Acc Id:

ENSRNOP00000077252 ⟸ ENSRNOT00000096827

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9Z1W6-F1-model_v2	AlphaFold	Q9Z1W6	1-581	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13695279

Promoter ID:

EPDNEW_R5804

Type:

multiple initiation site

Name:

Mtdh_1

Description:

metadherin

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	7	72,772,434 - 72,772,494	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:620992	AgrOrtholog
BioCyc Gene	G2FUF-33691	BioCyc
Ensembl Genes	ENSRNOG00000006870	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000009989	ENTREZGENE
	ENSRNOT00000096827	ENTREZGENE
	ENSRNOT00000105848	ENTREZGENE
	ENSRNOT00000108860	ENTREZGENE
InterPro	LYRIC	UniProtKB/Swiss-Prot
	TransReg_TumorExp	UniProtKB/Swiss-Prot
KEGG Report	rno:170910	UniProtKB/Swiss-Prot
NCBI Gene	170910	ENTREZGENE
PANTHER	LYSINE-RICH CEACAM1 CO-ISOLATED PROTEIN LYRIC PROTEIN	UniProtKB/Swiss-Prot
	PROTEIN LYRIC	UniProtKB/Swiss-Prot
Pfam	LYRIC	UniProtKB/Swiss-Prot
PhenoGen	Mtdh	PhenoGen
RatGTEx	ENSRNOG00000006870	RatGTEx
UniProt	A0A8I5Y7K9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZLQ8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AJK9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2UIC6	ENTREZGENE, UniProtKB/TrEMBL
	A6HQZ2	ENTREZGENE, UniProtKB/TrEMBL
	A6HQZ3_RAT	UniProtKB/TrEMBL
	A6HQZ4_RAT	UniProtKB/TrEMBL
	LYRIC_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-01-20	Mtdh	metadherin	Lyric	LYRIC	Symbol and Name updated	1299863	APPROVED
2002-08-07	Lyric	LYRIC			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD