Acsm3 (acyl-CoA synthetase medium-chain family member 3) - Rat Genome Database

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Gene: Acsm3 (acyl-CoA synthetase medium-chain family member 3) Rattus norvegicus
Analyze
Symbol: Acsm3
Name: acyl-CoA synthetase medium-chain family member 3
RGD ID: 62086
Description: Predicted to enable fatty-acyl-CoA synthase activity; medium-chain fatty acid-CoA ligase activity; and propionate CoA-transferase activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid biosynthetic process. Predicted to be located in mitochondrion. Predicted to be active in mitochondrial matrix. Used to study hypertension. Biomarker of ocular hypertension. Human ortholog(s) of this gene implicated in IgA glomerulonephritis. Orthologous to human ACSM3 (acyl-CoA synthetase medium chain family member 3); PARTICIPATES IN fatty acid beta degradation pathway; butanoate metabolic pathway; INTERACTS WITH 1,3,4-thiadiazole; 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: acyl-coenzyme A synthetase ACSM3, mitochondrial; butyrate--CoA ligase 3; butyryl coenzyme A synthetase 3; butyryl-coenzyme A synthetase 3; middle-chain acyl-CoA synthetase 3; propionate--CoA ligase; Sa; SA hypertension-associated homolog; SA rat hypertension-associated gene; SA rat hypertension-associated homolog; SA rat hypertension-associated protein; Sah; ssubA
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Is Marker For: Strains:   BB.SHR-(Acsm3-Igf2)/K ; SHR.WKY-(D1Wox34-Sah)/Njs
QTLs:   Bp28   Bp30   Bp44   Bw20   Iddm10  
Candidate Gene For: Bp30 Bp77 Bp78
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81183,564,652 - 183,591,328 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1183,564,635 - 183,591,437 (+)EnsemblGRCr8
mRatBN7.21174,133,260 - 174,159,966 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1174,133,288 - 174,160,184 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1182,448,828 - 182,475,531 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01189,634,871 - 189,661,572 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01182,371,819 - 182,397,104 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01189,514,504 - 189,541,233 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1189,514,553 - 189,541,224 (+)Ensemblrn6Rnor6.0
Rnor_5.01196,449,042 - 196,475,596 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41178,054,386 - 178,081,751 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1171,883,756 - 171,910,443 (+)NCBICelera
RGSC_v3.11178,212,017 - 178,214,310 (+)NCBI
Cytogenetic Map1q35NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
1,3,4-thiadiazole  (EXP)
1-naphthyl isothiocyanate  (EXP)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
3,3',4,4'-tetrachlorobiphenyl  (ISO)
3-chloropropane-1,2-diol  (EXP,ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (EXP)
acetamide  (EXP)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (EXP)
amitrole  (EXP)
ammonium chloride  (EXP)
belinostat  (ISO)
benzo[a]pyrene  (ISO)
bexarotene  (EXP)
bezafibrate  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chenodeoxycholic acid  (ISO)
chlorohydrocarbon  (EXP)
chromium(6+)  (ISO)
ciglitazone  (ISO)
cisplatin  (EXP,ISO)
clofibric acid  (EXP)
cobalt dichloride  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
D-glucose  (ISO)
deoxycholic acid  (ISO)
dextran sulfate  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (ISO)
dicrotophos  (ISO)
dieldrin  (EXP)
dimethyl sulfoxide  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
drometrizole  (ISO)
endosulfan  (EXP)
entinostat  (ISO)
epoxiconazole  (ISO)
erianin  (ISO)
eugenol  (EXP)
Evodiamine  (ISO)
folic acid  (ISO)
fructose  (ISO)
furan  (EXP)
genistein  (EXP)
gentamycin  (EXP)
glucose  (ISO)
glycidol  (ISO)
glycochenodeoxycholic acid  (ISO)
glycocholic acid  (ISO)
glycodeoxycholic acid  (ISO)
glyphosate  (EXP)
Heliotrine  (EXP,ISO)
hydrogen peroxide  (ISO)
Indeno[1,2,3-cd]pyrene  (ISO)
indole-3-methanol  (EXP)
indometacin  (EXP)
iron dichloride  (ISO)
isotretinoin  (ISO)
lead diacetate  (EXP)
lead(0)  (ISO)
lipopolysaccharide  (ISO)
melatonin  (ISO)
metformin  (EXP)
methimazole  (EXP)
methylmercury chloride  (EXP,ISO)
Muraglitazar  (EXP)
N-nitrosodiethylamine  (EXP)
N-nitrosomorpholine  (EXP)
nickel atom  (ISO)
nitrofen  (EXP)
O-methyleugenol  (ISO)
okadaic acid  (ISO)
orphenadrine  (EXP)
panobinostat  (ISO)
paracetamol  (ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP,ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
progesterone  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
rotenone  (EXP)
SB 431542  (ISO)
senecionine  (ISO)
Senkirkine  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sotorasib  (ISO)
sulfadimethoxine  (EXP)
sulforaphane  (ISO)
tamoxifen  (EXP)
tetrachloromethane  (ISO)
tetracycline  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
trametinib  (ISO)
trichostatin A  (ISO)
triclosan  (ISO)
triphenyl phosphate  (EXP)
valproic acid  (ISO)
vancomycin  (ISO)
vinclozolin  (EXP)
vorinostat  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
mitochondrial matrix  (IBA,IEA,ISO)
mitochondrion  (IEA,ISO,ISS)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Overweight, but not hypertension, is associated with SAH polymorphisms in Caucasians with essential hypertension. Benjafield AV, etal., Hypertens Res. 2003 Aug;26(8):591-5.
2. Zhonghua yi xue yi chuan xue za zhi = Zhonghua yixue yichuanxue zazhi = Chinese journal of medical genetics Chen Y, etal., Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2001 Oct;18(5):366-70.
3. Impaired butyrate oxidation in ulcerative colitis is due to decreased butyrate uptake and a defect in the oxidation pathway. De Preter V, etal., Inflamm Bowel Dis. 2012 Jun;18(6):1127-36. doi: 10.1002/ibd.21894. Epub 2011 Oct 10.
4. Genome scan and congenic strains for blood pressure QTL using Dahl salt-sensitive rats. Garrett MR, etal., Genome Res 1998 Jul;8(7):711-23
5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
6. Genetic mapping of two blood pressure quantitative trait loci on rat chromosome 1. Gu L, etal., J Clin Invest 1996 Feb 1;97(3):777-88
7. Three microsatellites defining four alleles for the rat SA gene. Gu L, etal., Mamm Genome 1994 Dec;5(12):833.
8. Possible alternative splicing of the rat SA gene. Gu L, etal., Mamm Genome 1995 Sep;6(9):683-4.
9. SA gene and blood pressure cosegregation using Dahl salt-sensitive rats. Harris EL, etal., Am J Hypertens 1993 Apr;6(4):330-4.
10. Novel quantitative trait loci for blood pressure and related traits on rat chromosomes 1, 10, and 18. Kovacs P, etal., Biochem Biophys Res Commun 1997 Jun 18;235(2):343-8
11. Molecular genetics of the SA-gene: cosegregation with hypertension and mapping to rat chromosome 1. Lindpaintner K, etal., J Hypertens 1993 Jan;11(1):19-23
12. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
13. Role of genetic polymorphism in the SA gene on the blood pressure and prognosis of renal function in patients with immunoglobulin A nephropathy. Narita I, etal., Hypertens Res. 2002 Nov;25(6):831-6.
14. Retinal gene profiling in a hereditary rodent model of elevated intraocular pressure. Naskar R and Thanos S, Mol Vis. 2006 Oct 18;12:1199-210.
15. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
16. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
17. GOA pipeline RGD automated data pipeline
18. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
19. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
20. Comprehensive gene review and curation RGD comprehensive gene curation
21. Localization of a blood pressure QTL on rat chromosome 1 using dahl rat congenic strains Saad Y, etal., Physiol Genomics 1999 Nov 11;1(3):119-25.
22. Tentative Sequence Identification Numbers Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
23. Evidence for 26 distinct acyl-coenzyme A synthetase genes in the human genome. Watkins PA, etal., J Lipid Res. 2007 Dec;48(12):2736-50. Epub 2007 Aug 30.
Additional References at PubMed
PMID:11470804   PMID:12477932   PMID:14651853   PMID:18614015   PMID:33923085  


Genomics

Comparative Map Data
Acsm3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81183,564,652 - 183,591,328 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1183,564,635 - 183,591,437 (+)EnsemblGRCr8
mRatBN7.21174,133,260 - 174,159,966 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1174,133,288 - 174,160,184 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1182,448,828 - 182,475,531 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01189,634,871 - 189,661,572 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01182,371,819 - 182,397,104 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01189,514,504 - 189,541,233 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1189,514,553 - 189,541,224 (+)Ensemblrn6Rnor6.0
Rnor_5.01196,449,042 - 196,475,596 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41178,054,386 - 178,081,751 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1171,883,756 - 171,910,443 (+)NCBICelera
RGSC_v3.11178,212,017 - 178,214,310 (+)NCBI
Cytogenetic Map1q35NCBI
ACSM3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381620,674,405 - 20,797,581 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1620,610,243 - 20,797,843 (+)Ensemblhg38GRCh38
GRCh371620,775,336 - 20,808,903 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361620,682,813 - 20,715,980 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341620,682,812 - 20,715,979NCBI
Celera1620,085,531 - 20,118,378 (+)NCBICelera
Cytogenetic Map16p12.3NCBI
HuRef1619,310,909 - 19,343,750 (+)NCBIHuRef
CHM1_11620,862,551 - 20,895,398 (+)NCBICHM1_1
T2T-CHM13v2.01620,605,311 - 20,728,512 (+)NCBIT2T-CHM13v2.0
Acsm3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397119,360,106 - 119,384,119 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7119,360,146 - 119,386,736 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm387119,760,883 - 119,784,896 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7119,760,923 - 119,787,513 (+)Ensemblmm10GRCm38
MGSCv377126,904,437 - 126,928,410 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv367119,552,072 - 119,576,045 (+)NCBIMGSCv36mm8
Celera7119,680,775 - 119,704,303 (+)NCBICelera
Cytogenetic Map7F2NCBI
cM Map764.17NCBI
Acsm3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495549372,633 - 96,348 (+)Ensembl
ChiLan1.0NW_00495549373,306 - 95,521 (+)NCBIChiLan1.0ChiLan1.0
ACSM3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21821,917,691 - 21,964,777 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11626,438,183 - 26,485,179 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01617,611,715 - 17,644,587 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11620,796,425 - 20,829,734 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1620,796,425 - 20,829,315 (+)EnsemblpanPan2panpan1.1
ACSM3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1624,558,010 - 24,594,326 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl624,558,142 - 24,582,728 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha622,794,570 - 22,815,828 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0624,713,351 - 24,738,717 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl624,713,760 - 24,738,638 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1624,514,283 - 24,539,642 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0624,409,510 - 24,434,851 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0624,793,586 - 24,812,573 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Acsm3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344117,980,363 - 117,997,679 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365016,078,219 - 6,095,538 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365016,077,366 - 6,095,432 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACSM3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl325,247,725 - 25,283,709 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1325,247,723 - 25,284,063 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2326,031,989 - 26,068,440 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ACSM3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1518,876,390 - 18,929,914 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl518,904,110 - 18,929,729 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366606810,973,567 - 11,023,810 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Acsm3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247826,930,505 - 6,959,069 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247826,930,461 - 6,958,867 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Acsm3
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1281,893,335 - 81,911,835 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Acsm3
289 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:62
Count of miRNA genes:48
Interacting mature miRNAs:61
Transcripts:ENSRNOT00000020039
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578778Pur4Proteinuria QTL 43.30.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1160111531262090437Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1160573753266453731Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1153679879198679879Rat
1354653Despr9Despair related QTL 90.00019locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1177339686222339686Rat
1578770Stresp23Stress response QTL 23kidney sympathetic nerve activity (VT:0004050)stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786)1132760429191848948Rat
2293673Bss27Bone structure and strength QTL 2718.630.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)1181059071226059071Rat
61326Eae6Experimental allergic encephalomyelitis QTL 65.3body mass (VT:0001259)change in body weight (CMO:0002045)1182383862191260518Rat
2293677Bss41Bone structure and strength QTL 419.380.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)1181059071226059071Rat
70160Bw18Body weight QTL 185.7body mass (VT:0001259)body weight (CMO:0000012)1153679879205813246Rat
1549830Bss1Bone structure and strength QTL 14.8femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)1182039247227039247Rat
8694166Bw147Body weight QTL 1476.830.001body mass (VT:0001259)body weight gain (CMO:0000420)1153788989198788989Rat
70163Bw20Body weight QTL 205.1body mass (VT:0001259)body weight (CMO:0000012)1183564652228564652Rat
1600397Edcs4Endometrial carcinoma susceptibility QTL 42.2uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)1176288899270518180Rat
1354636Lmblg1Limb length QTL 16.4tibia length (VT:0004357)tibia length (CMO:0000450)1160573753210707719Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1162548015270518180Rat
2293689Bss47Bone structure and strength QTL 477.250.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)1181059071226059071Rat
152025235Bw194Body weight QTL 1944.86body mass (VT:0001259)1132966869252856240Rat
61341Bp26Blood pressure QTL 26arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1139442053223964440Rat
1598853Memor3Memory QTL 34.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)1152919152268496042Rat
1354634Kidm12Kidney mass QTL 123.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)1160573753210707719Rat
4889428Stresp24Stress response QTL 240.05heart pumping trait (VT:2000009)absolute change in electrocardiographic low frequency R-R spectral component to high frequency R-R spectral component ratio (CMO:0002162)1165278545210278545Rat
152025232Bw192Body weight QTL 1923.93body mass (VT:0001259)1127329268206393015Rat
1578759Uae30Urinary albumin excretion QTL 303.30.003urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1160111531262090437Rat
61343Bp28Blood pressure QTL 28arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1161077990206077990Rat
2293693Bss22Bone structure and strength QTL 2233.520.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1181059071226059071Rat
1358902Bw47Body weight QTL 471.67body mass (VT:0001259)body weight (CMO:0000012)199645382221502378Rat
2300161Bmd43Bone mineral density QTL 438.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1181059071226059071Rat
61347Bp197Blood pressure QTL 1974.2arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)1168063662213063662Rat
61348Bp30Blood pressure QTL 302.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1159894717207261263Rat
8655649Arrd1Age-related retinal degeneration QTL 14.89retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1109493780193400781Rat
2303622Vencon6Ventilatory control QTL 60.001respiration trait (VT:0001943)respiration rate (CMO:0000289)1163992710208992710Rat
631214Bw61Body weight QTL613.40.0001intramuscular adipose amount (VT:0010044)intramuscular fat area (CMO:0001162)1182535316227535316Rat
7771612Cm80Cardiac mass QTL 808.4heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)1146080545243492863Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1103779152223964440Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)198879955208479939Rat
1300158Bp173Blood pressure QTL 1733.48arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)1155359438194575574Rat
2300174Bmd42Bone mineral density QTL 428.40.0001lumbar vertebra mineral mass (VT:0010511)bone mineral density (CMO:0001226)1181059071226059071Rat
631206Niddm40Non-insulin dependent diabetes mellitus QTL 40blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1140833106185833106Rat
737828Hcas3Hepatocarcinoma susceptibility QTL 34.9liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)1153679879232414077Rat
1354661Bw33Body weight QTL 335.2body mass (VT:0001259)body weight (CMO:0000012)1160573753266453731Rat
1358886Bp260Blood pressure QTL 2603.67arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1160574007235238518Rat
1331751Bp199Blood pressure QTL 1993.60022arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1116099376191260518Rat
2293654Bss30Bone structure and strength QTL 3032.650.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1181059071226059071Rat
724531Uae5Urinary albumin excretion QTL 54urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)1160111426262090599Rat
2300187Bmd41Bone mineral density QTL 418.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1181059071226059071Rat
1641895Bp298Blood pressure QTL 298arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1132760429191848948Rat
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1154961463266453731Rat
70209Niddm23Non-insulin dependent diabetes mellitus QTL 232.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1162753891207753891Rat
1358294Bw37Body weight QTL 3750.000011body mass (VT:0001259)body weight (CMO:0000012)1180739993225739993Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)151941022208479811Rat
61379Bp44Blood pressure QTL 4419.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1153680016183564652Rat
2312420Pur17Proteinuria QTL 177.10.0001urine protein amount (VT:0005160)urine total protein excretion rate (CMO:0000756)1172718770228180370Rat
6893347Bw98Body weight QTL 980.20.53body mass (VT:0001259)body weight (CMO:0000012)1143092939188092939Rat
1354591Cm36Cardiac mass QTL 364.1heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1111949780210707719Rat
2312558Glom17Glomerulus QTL 173.90.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)1175967553200707874Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134565911208798288Rat
631519Pia11Pristane induced arthritis QTL 115.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)193903998191260518Rat
619614Bp78Blood pressure QTL 780.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1178547286206690557Rat
6893361Bw104Body weight QTL 1040.590.27body mass (VT:0001259)body weight (CMO:0000012)1143092939188092939Rat
724562Rends1Renal damage susceptibility QTL 10.05kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)1139442053223964440Rat
738006Anxrr14Anxiety related response QTL 1440.00035locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1140048073185048073Rat
1558645Bw55Body weight QTL 553.20.004body mass (VT:0001259)body weight (CMO:0000012)1143092939188092939Rat
1354615Cm32Cardiac mass QTL 325.2heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1111949780210707719Rat
1354610Bw34Body weight QTL 344.1body mass (VT:0001259)body weight (CMO:0000012)1160573753266453731Rat
738028Anxrr12Anxiety related response QTL 124.90.00001locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1140048073185048073Rat
1354620Kidm19Kidney mass QTL 194kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1160573753210707719Rat
1576310Schws2Schwannoma susceptibility QTL 20.029nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)1153788989198788989Rat
1354618Kidm15Kidney mass QTL 155kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)1165707719210707719Rat
6903303Scl34Serum cholesterol QTL 342.50.0033blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)1173363824227535316Rat
631544Bp84Blood pressure QTL 845.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1132760429191190115Rat
152025212Bw190Body weight QTL 1905.7body mass (VT:0001259)1132966869206393015Rat
631548Bp88Blood pressure QTL 8850.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1140915717185915717Rat
1358189Cstrr1Cold stress response QTL 10.0001catecholamine amount (VT:0010543)urine norepinephrine level (CMO:0001629)1132760429191848948Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1111949780228180370Rat
7411599Foco11Food consumption QTL 1118.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)1153788989198788989Rat
1354602Bw35Body weight QTL 3512.2body mass (VT:0001259)body weight (CMO:0000012)1160573753210707719Rat
631670Iddm10Insulin dependent diabetes mellitus QTL 101.9blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1183564652205813246Rat

Markers in Region
D1Mco13  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21174,149,124 - 174,149,306 (+)MAPPERmRatBN7.2
Rnor_6.01189,530,391 - 189,530,572NCBIRnor6.0
Rnor_5.01196,464,943 - 196,465,124UniSTSRnor5.0
RGSC_v3.41178,070,773 - 178,070,955RGDRGSC3.4
RGSC_v3.41178,070,774 - 178,070,955UniSTSRGSC3.4
Celera1171,899,582 - 171,899,763UniSTS
RGSC_v3.11178,210,019 - 178,210,201RGD
Cytogenetic Map1q35UniSTS
D1Mco14  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81183,575,600 - 183,575,871 (+)Marker Load Pipeline
mRatBN7.21174,144,236 - 174,144,507 (+)MAPPERmRatBN7.2
Rnor_6.01189,525,503 - 189,525,773NCBIRnor6.0
Rnor_5.01196,460,055 - 196,460,325UniSTSRnor5.0
RGSC_v3.41178,065,885 - 178,066,157RGDRGSC3.4
RGSC_v3.41178,065,886 - 178,066,156UniSTSRGSC3.4
Celera1171,894,694 - 171,894,964UniSTS
RGSC_v3.11178,205,131 - 178,205,403RGD
Cytogenetic Map1q35UniSTS
D1Wox50  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81183,575,660 - 183,575,864 (+)Marker Load Pipeline
mRatBN7.21174,144,297 - 174,144,500 (+)MAPPERmRatBN7.2
Rnor_6.01189,525,564 - 189,525,766NCBIRnor6.0
Rnor_5.01196,460,116 - 196,460,318UniSTSRnor5.0
RGSC_v3.41178,065,947 - 178,066,149UniSTSRGSC3.4
Celera1171,894,755 - 171,894,957UniSTS
Cytogenetic Map1q35UniSTS
D1Wox49  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21174,149,124 - 174,149,303 (+)MAPPERmRatBN7.2
Rnor_6.01189,530,391 - 189,530,569NCBIRnor6.0
Rnor_5.01196,464,943 - 196,465,121UniSTSRnor5.0
RGSC_v3.41178,070,774 - 178,070,952UniSTSRGSC3.4
Celera1171,899,582 - 171,899,760UniSTS
Cytogenetic Map1q35UniSTS
BE108110  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81183,584,551 - 183,584,715 (+)Marker Load Pipeline
mRatBN7.21174,153,189 - 174,153,353 (+)MAPPERmRatBN7.2
Rnor_6.01189,534,457 - 189,534,620NCBIRnor6.0
Rnor_5.01196,468,820 - 196,468,983UniSTSRnor5.0
RGSC_v3.41178,074,930 - 178,075,093UniSTSRGSC3.4
Celera1171,903,644 - 171,903,807UniSTS
RH 3.4 Map11376.4UniSTS
Cytogenetic Map1q35UniSTS
RH144126  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81183,579,155 - 183,579,651 (+)Marker Load Pipeline
mRatBN7.21174,147,791 - 174,148,287 (+)MAPPERmRatBN7.2
Rnor_6.01189,529,058 - 189,529,553NCBIRnor6.0
Rnor_5.01196,463,610 - 196,464,105UniSTSRnor5.0
RGSC_v3.41178,069,441 - 178,069,936UniSTSRGSC3.4
Celera1171,898,249 - 171,898,744UniSTS
Cytogenetic Map1q35UniSTS
BE098160  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21174,158,902 - 174,159,114 (+)MAPPERmRatBN7.2
Rnor_6.01189,540,170 - 189,540,381NCBIRnor6.0
Rnor_5.01196,474,533 - 196,474,744UniSTSRnor5.0
RGSC_v3.41178,080,688 - 178,080,899UniSTSRGSC3.4
Celera1171,909,380 - 171,909,591UniSTS
Cytogenetic Map1q35UniSTS


Related Rat Strains
The following Strains have been annotated to Acsm3
BB.SHR-(Acsm3-Igf2)/K     SHR.WKY-(D1Wox34-Sah)/Njs     WKY.SHRSP-Sah/Jr    


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
18 12 24 142 91 90 59 57 59 6 301 109 7 126 107 110 31 12 12

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_033231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006230105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006230106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AY455861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY456695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC090325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HC890693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HC895225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S62516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S62903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U04637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U04638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U19832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000020039   ⟹   ENSRNOP00000020039
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1183,564,635 - 183,591,321 (+)Ensembl
mRatBN7.2 Ensembl1174,133,288 - 174,159,957 (+)Ensembl
Rnor_6.0 Ensembl1189,514,553 - 189,541,224 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000100187   ⟹   ENSRNOP00000081130
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1183,564,635 - 183,591,437 (+)Ensembl
mRatBN7.2 Ensembl1174,133,288 - 174,160,184 (+)Ensembl
RefSeq Acc Id: NM_033231   ⟹   NP_150234
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81183,564,652 - 183,591,328 (+)NCBI
mRatBN7.21174,133,288 - 174,159,966 (+)NCBI
Rnor_6.01189,514,553 - 189,541,233 (+)NCBI
Rnor_5.01196,449,042 - 196,475,596 (+)NCBI
RGSC_v3.41178,054,386 - 178,081,751 (+)RGD
Celera1171,883,756 - 171,910,443 (+)RGD
Sequence:
RefSeq Acc Id: XM_006230106   ⟹   XP_006230168
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81183,571,417 - 183,591,328 (+)NCBI
mRatBN7.21174,141,068 - 174,159,966 (+)NCBI
Rnor_6.01189,514,504 - 189,541,233 (+)NCBI
Rnor_5.01196,449,042 - 196,475,596 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039100816   ⟹   XP_038956744
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81183,571,419 - 183,591,328 (+)NCBI
mRatBN7.21174,133,260 - 174,159,966 (+)NCBI
RefSeq Acc Id: XM_063281035   ⟹   XP_063137105
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81183,571,419 - 183,591,328 (+)NCBI
RefSeq Acc Id: XM_063281037   ⟹   XP_063137107
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81183,571,417 - 183,583,506 (+)NCBI
RefSeq Acc Id: NP_150234   ⟸   NM_033231
- UniProtKB: Q6SKG1 (UniProtKB/Swiss-Prot),   Q62742 (UniProtKB/Swiss-Prot),   A0A8I6G5I9 (UniProtKB/TrEMBL),   A6I8M8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006230168   ⟸   XM_006230106
- Peptide Label: isoform X1
- UniProtKB: A0A8I6G5I9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000020039   ⟸   ENSRNOT00000020039
RefSeq Acc Id: XP_038956744   ⟸   XM_039100816
- Peptide Label: isoform X2
- UniProtKB: A0A8I6G5I9 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000081130   ⟸   ENSRNOT00000100187
RefSeq Acc Id: XP_063137107   ⟸   XM_063281037
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063137105   ⟸   XM_063281035
- Peptide Label: isoform X3
- UniProtKB: A0A8I6G5I9 (UniProtKB/TrEMBL)
Protein Domains
AMP-binding enzyme C-terminal   AMP-dependent synthetase/ligase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6SKG1-F1-model_v2 AlphaFold Q6SKG1 1-580 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13690354
Promoter ID:EPDNEW_R879
Type:initiation region
Name:Acsm3_1
Description:acyl-CoA synthetase medium-chain family member 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01189,514,516 - 189,514,576EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:62086 AgrOrtholog
BioCyc Gene G2FUF-57640 BioCyc
BioCyc Pathway FAO-PWY [fatty acid beta-oxidation I (generic)] BioCyc
  PWY-5143 [long-chain fatty acid activation] BioCyc
  PWY-5972 [stearate biosynthesis I (animals)] BioCyc
  PWY-6000 [gamma-linolenate biosynthesis II (animals)] BioCyc
  PWY-7049 [icosapentaenoate biosynthesis II (6-desaturase, mammals)] BioCyc
  PWY-8181 [2-methyl-branched fatty acid beta-oxidation] BioCyc
  PWY3DJ-11470 [sphingosine and sphingosine-1-phosphate metabolism] BioCyc
  PWY66-387 [3-methyl-branched fatty acid alpha-oxidation] BioCyc
  PWY66-388 [ceramide degradation by alpha-oxidation] BioCyc
  PWY66-389 [phytol degradation] BioCyc
  PWY66-391 [fatty acid beta-oxidation VI (mammalian peroxisome)] BioCyc
BioCyc Pathway Image FAO-PWY BioCyc
  PWY-5143 BioCyc
  PWY-5972 BioCyc
  PWY-6000 BioCyc
  PWY-7049 BioCyc
  PWY-8181 BioCyc
  PWY3DJ-11470 BioCyc
  PWY66-387 BioCyc
  PWY66-388 BioCyc
  PWY66-389 BioCyc
  PWY66-391 BioCyc
Ensembl Genes ENSRNOG00000032246 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000020039 ENTREZGENE
  ENSRNOT00000020039.7 UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.300.30 UniProtKB/Swiss-Prot
  3.40.50.12780 UniProtKB/Swiss-Prot
InterPro AMP-bd_C UniProtKB/Swiss-Prot
  AMP-bd_C_sf UniProtKB/Swiss-Prot
  AMP-binding_CS UniProtKB/Swiss-Prot
  AMP-dep_Synth/Lig UniProtKB/Swiss-Prot
  AMP-dep_Synthh-like_sf UniProtKB/Swiss-Prot
  Mitochondrial_ACSM UniProtKB/Swiss-Prot
KEGG Report rno:24763 UniProtKB/Swiss-Prot
NCBI Gene Acsm3 ENTREZGENE
PANTHER ACYL-COENZYME A SYNTHETASE UniProtKB/Swiss-Prot
  ACYL-COENZYME A SYNTHETASE ACSM3, MITOCHONDRIAL UniProtKB/Swiss-Prot
Pfam AMP-binding UniProtKB/Swiss-Prot
  AMP-binding_C UniProtKB/Swiss-Prot
PhenoGen Acsm3 PhenoGen
PROSITE AMP_BINDING UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000032246 RatGTEx
Superfamily-SCOP Acetyl-CoA synthetase-like UniProtKB/Swiss-Prot
TIGR TC224408
UniProt A0A8I6G5I9 ENTREZGENE, UniProtKB/TrEMBL
  A6I8M8 ENTREZGENE, UniProtKB/TrEMBL
  ACSM3_RAT UniProtKB/Swiss-Prot
  Q62742 ENTREZGENE
  Q6SKG1 ENTREZGENE
UniProt Secondary Q62742 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2007-09-13 Acsm3  acyl-CoA synthetase medium-chain family member 3  Sah  SA rat hypertension-associated gene  Symbol and Name updated to reflect Human and Mouse nomenclature 1299863 APPROVED
2005-11-17 Sah  SA rat hypertension-associated gene      Name updated 1299863 APPROVED
2003-04-09 Sah  SA rat hypertension-associated homolog      Symbol and Name updated 629477 APPROVED
2003-03-06 Sah  SA rat hypertension-associated homolog  Sa  ssubA gene  Data merged from RGD:3616 628472 PROVISIONAL
2002-06-10 Sa  ssubA gene      Symbol and Name status set to provisional 70585 PROVISIONAL
2002-06-10 Sah  SA rat hypertension-associated homolog      Symbol and Name status set to approved 70586 APPROVED

RGD Curation Notes
Note Type Note Reference