Myt1l (myelin transcription factor 1-like) - Rat Genome Database

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Gene: Myt1l (myelin transcription factor 1-like) Rattus norvegicus
Analyze
Symbol: Myt1l
Name: myelin transcription factor 1-like
RGD ID: 620550
Description: Enables several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; retinoic acid-responsive element binding activity; and transition metal ion binding activity. Involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in chromosome. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in autosomal dominant intellectual developmental disorder 39. Orthologous to human MYT1L (myelin transcription factor 1 like); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 4,4'-sulfonyldiphenol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: myelin transcription factor 1-like protein; myT1-L; neural zinc finger factor 1; neural zinc finger transcription factor 1; Nzf-1; Nzf1; Nztf1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8651,892,858 - 52,291,830 (+)NCBIGRCr8
mRatBN7.2646,164,742 - 46,564,234 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl646,428,150 - 46,561,671 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx646,468,791 - 46,869,128 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0646,783,654 - 47,183,987 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0646,220,555 - 46,619,260 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0648,452,385 - 48,843,443 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl648,452,369 - 48,857,936 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0657,146,300 - 57,530,068 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4647,435,167 - 47,828,030 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1647,438,292 - 47,831,156 (+)NCBI
Celera645,383,759 - 45,769,768 (+)NCBICelera
Cytogenetic Map6q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
chromosome  (IEA)
nucleus  (IBA,IEA,ISO,ISS)

References

References - curated
# Reference Title Reference Citation
1. X-MyT1, a Xenopus C2HC-type zinc finger protein with a regulatory function in neuronal differentiation. Bellefroid EJ, etal., Cell 1996 Dec 27;87(7):1191-202.
2. Metal and DNA binding properties of a two-domain fragment of neural zinc finger factor 1, a CCHC-type zinc binding protein. Berkovits HJ and Berg JM, Biochemistry. 1999 Dec 21;38(51):16826-30.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. A novel family of Cys-Cys, His-Cys zinc finger transcription factors expressed in developing nervous system and pituitary gland. Jiang Y, etal., J Biol Chem 1996 May 3;271(18):10723-30.
5. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
6. GOA pipeline RGD automated data pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9373037   PMID:14744132   PMID:24243019   PMID:25931508   PMID:28379941  


Genomics

Comparative Map Data
Myt1l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8651,892,858 - 52,291,830 (+)NCBIGRCr8
mRatBN7.2646,164,742 - 46,564,234 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl646,428,150 - 46,561,671 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx646,468,791 - 46,869,128 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0646,783,654 - 47,183,987 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0646,220,555 - 46,619,260 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0648,452,385 - 48,843,443 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl648,452,369 - 48,857,936 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0657,146,300 - 57,530,068 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4647,435,167 - 47,828,030 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1647,438,292 - 47,831,156 (+)NCBI
Celera645,383,759 - 45,769,768 (+)NCBICelera
Cytogenetic Map6q16NCBI
MYT1L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3821,789,113 - 2,331,275 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl21,789,113 - 2,331,664 (-)EnsemblGRCh38hg38GRCh38
GRCh3721,792,885 - 2,335,047 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3621,771,892 - 2,314,052 (-)NCBINCBI36Build 36hg18NCBI36
Build 3421,765,601 - 2,305,263NCBI
Celera21,839,186 - 2,380,235 (-)NCBICelera
Cytogenetic Map2p25.3NCBI
HuRef21,876,277 - 2,319,463 (-)NCBIHuRef
HuRef21,777,578 - 1,840,458 (-)NCBIHuRef
CHM1_121,792,613 - 2,334,641 (-)NCBICHM1_1
T2T-CHM13v2.021,796,915 - 2,341,550 (-)NCBIT2T-CHM13v2.0
Myt1l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391229,578,375 - 29,973,215 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1229,578,383 - 29,973,212 (+)EnsemblGRCm39 Ensembl
GRCm381229,527,590 - 29,923,216 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1229,528,384 - 29,923,213 (+)EnsemblGRCm38mm10GRCm38
MGSCv371230,213,249 - 30,608,074 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361230,114,661 - 30,506,785 (+)NCBIMGSCv36mm8
Celera1230,988,997 - 31,404,780 (+)NCBICelera
Cytogenetic Map12A2NCBI
cM Map1211.86NCBI
Myt1l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554874,725,889 - 4,855,369 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554874,457,145 - 4,855,369 (+)NCBIChiLan1.0ChiLan1.0
MYT1L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v212124,199,786 - 124,760,694 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A124,203,765 - 124,764,671 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A1,744,466 - 2,332,146 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A1,735,673 - 2,272,908 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A1,735,673 - 1,927,123 (-)Ensemblpanpan1.1panPan2
MYT1L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.117920,727 - 1,325,335 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl17922,276 - 1,057,585 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha17906,294 - 1,310,944 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.017976,597 - 1,381,233 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl17977,707 - 1,161,361 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.117900,032 - 1,305,084 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.017920,369 - 1,325,311 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.017921,538 - 1,326,100 (-)NCBIUU_Cfam_GSD_1.0
Myt1l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629245,802,634 - 46,160,660 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936532560,327 - 688,232 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936532557,680 - 916,082 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYT1L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3132,125,508 - 132,294,013 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13131,928,059 - 132,294,015 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23141,580,299 - 141,704,744 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MYT1L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.114105,679,736 - 105,891,013 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl14105,757,023 - 105,891,025 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660456,091,483 - 6,633,718 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Myt1l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248466,123,216 - 6,244,031 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248465,859,485 - 6,246,771 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Myt1l
1694 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:340
Count of miRNA genes:124
Interacting mature miRNAs:135
Transcripts:ENSRNOT00000005905, ENSRNOT00000044310
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)61173566972593685Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)61173566972593685Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
2292589Emca10Estrogen-induced mammary cancer QTL 100.048mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)61653614061536140Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)61653614071636405Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)62033877762613667Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
1331779Rf38Renal function QTL 382.876kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)63207442872227641Rat
634318Bw118Body weight QTL 1183.55abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)63330954957730294Rat
6893340Cm77Cardiac mass QTL 770.260.57heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)63330954981132889Rat
1300143Rf14Renal function QTL 142.92renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)63443413777102317Rat
1354632Scl29Serum cholesterol level QTL 293.74blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)63509870971636405Rat
634307Bp141Blood pressure QTL 1414arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)63523041780230417Rat
70199Coreg1Compensatory renal growth QTL 111.8kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)63569161857730540Rat
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)63878398983783989Rat
9590306Scort18Serum corticosterone level QTL 182.880.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)63878398983783989Rat
9590140Scort4Serum corticosterone level QTL 414.490.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)63878398983783989Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)645790088104200226Rat

Markers in Region
AU048399  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2646,213,330 - 46,213,605 (+)MAPPERmRatBN7.2
Rnor_6.0648,494,634 - 48,494,906NCBIRnor6.0
Rnor_5.0657,188,549 - 57,188,821UniSTSRnor5.0
RGSC_v3.4647,477,466 - 47,477,738UniSTSRGSC3.4
Celera645,425,994 - 45,426,266UniSTS
Cytogenetic Map6q16UniSTS
RH139867  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2646,501,820 - 46,502,010 (+)MAPPERmRatBN7.2
Rnor_6.0648,782,409 - 48,782,598NCBIRnor6.0
Rnor_5.0657,472,793 - 57,472,982UniSTSRnor5.0
Celera645,709,775 - 45,709,964UniSTS
RH 3.4 Map6296.0UniSTS
Cytogenetic Map6q16UniSTS
Myt1l  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2646,560,943 - 46,561,525 (+)MAPPERmRatBN7.2
Rnor_6.0648,842,716 - 48,843,297NCBIRnor6.0
Rnor_5.0657,529,341 - 57,529,922UniSTSRnor5.0
RGSC_v3.4647,827,303 - 47,827,884UniSTSRGSC3.4
Celera645,769,041 - 45,769,622UniSTS
Cytogenetic Map6q16UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 66
Low 1 7 6 6 18 1
Below cutoff 2 16 15 8 11 8 6 7 2 29 23 10 6

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_053888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH473947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U48809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U67081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000005905   ⟹   ENSRNOP00000005905
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl646,428,150 - 46,561,671 (+)Ensembl
Rnor_6.0 Ensembl648,708,368 - 48,843,296 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000044310   ⟹   ENSRNOP00000045413
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl646,428,150 - 46,561,671 (+)Ensembl
Rnor_6.0 Ensembl648,452,369 - 48,857,936 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000095119   ⟹   ENSRNOP00000084839
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl646,428,150 - 46,561,671 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000103568   ⟹   ENSRNOP00000087359
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl646,485,588 - 46,501,531 (+)Ensembl
RefSeq Acc Id: NM_053888   ⟹   NP_446340
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,082 - 52,291,828 (+)NCBI
mRatBN7.2646,170,747 - 46,564,227 (+)NCBI
Rnor_6.0648,452,385 - 48,843,443 (+)NCBI
Rnor_5.0657,146,300 - 57,530,068 (+)NCBI
RGSC_v3.4647,435,167 - 47,828,030 (+)RGD
Celera645,383,759 - 45,769,768 (+)RGD
Sequence:
RefSeq Acc Id: XM_039111667   ⟹   XP_038967595
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,028 - 52,291,830 (+)NCBI
mRatBN7.2646,171,381 - 46,561,527 (+)NCBI
RefSeq Acc Id: XM_039111668   ⟹   XP_038967596
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,892,858 - 52,291,830 (+)NCBI
mRatBN7.2646,164,742 - 46,561,527 (+)NCBI
RefSeq Acc Id: XM_039111669   ⟹   XP_038967597
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,897,665 - 52,291,830 (+)NCBI
mRatBN7.2646,169,397 - 46,561,527 (+)NCBI
RefSeq Acc Id: XM_039111670   ⟹   XP_038967598
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,028 - 52,291,830 (+)NCBI
mRatBN7.2646,170,686 - 46,561,527 (+)NCBI
RefSeq Acc Id: XM_039111671   ⟹   XP_038967599
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,900,429 - 52,291,830 (+)NCBI
mRatBN7.2646,172,069 - 46,561,527 (+)NCBI
RefSeq Acc Id: XM_039111672   ⟹   XP_038967600
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,028 - 52,291,830 (+)NCBI
mRatBN7.2646,170,688 - 46,564,234 (+)NCBI
RefSeq Acc Id: XM_039111673   ⟹   XP_038967601
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,028 - 52,291,830 (+)NCBI
mRatBN7.2646,170,686 - 46,561,527 (+)NCBI
RefSeq Acc Id: XM_039111675   ⟹   XP_038967603
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,280 - 52,291,830 (+)NCBI
mRatBN7.2646,171,381 - 46,561,527 (+)NCBI
RefSeq Acc Id: XM_039111676   ⟹   XP_038967604
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,893,077 - 52,291,830 (+)NCBI
mRatBN7.2646,164,742 - 46,561,527 (+)NCBI
RefSeq Acc Id: XM_039111677   ⟹   XP_038967605
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,897,627 - 52,291,830 (+)NCBI
mRatBN7.2646,169,397 - 46,561,527 (+)NCBI
RefSeq Acc Id: XM_039111678   ⟹   XP_038967606
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,028 - 52,291,830 (+)NCBI
mRatBN7.2646,170,686 - 46,561,527 (+)NCBI
RefSeq Acc Id: XM_039111680   ⟹   XP_038967608
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,036 - 52,291,830 (+)NCBI
mRatBN7.2646,170,694 - 46,561,896 (+)NCBI
RefSeq Acc Id: XM_039111681   ⟹   XP_038967609
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,028 - 52,291,830 (+)NCBI
mRatBN7.2646,170,688 - 46,564,234 (+)NCBI
RefSeq Acc Id: XM_039111682   ⟹   XP_038967610
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,892,867 - 52,291,830 (+)NCBI
mRatBN7.2646,164,742 - 46,564,234 (+)NCBI
RefSeq Acc Id: XM_039111683   ⟹   XP_038967611
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,024 - 52,291,830 (+)NCBI
mRatBN7.2646,170,682 - 46,564,234 (+)NCBI
RefSeq Acc Id: XM_039111684   ⟹   XP_038967612
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,024 - 52,291,830 (+)NCBI
mRatBN7.2646,170,680 - 46,564,234 (+)NCBI
RefSeq Acc Id: XM_039111686   ⟹   XP_038967614
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,027 - 52,291,830 (+)NCBI
mRatBN7.2646,170,686 - 46,562,137 (+)NCBI
RefSeq Acc Id: XM_039111687   ⟹   XP_038967615
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,033 - 52,291,830 (+)NCBI
mRatBN7.2646,170,691 - 46,562,137 (+)NCBI
RefSeq Acc Id: XM_039111689   ⟹   XP_038967617
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,027 - 52,291,830 (+)NCBI
mRatBN7.2646,170,686 - 46,564,234 (+)NCBI
RefSeq Acc Id: XM_039111690   ⟹   XP_038967618
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,027 - 52,291,830 (+)NCBI
mRatBN7.2646,170,687 - 46,564,234 (+)NCBI
RefSeq Acc Id: XM_063261459   ⟹   XP_063117529
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,028 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261460   ⟹   XP_063117530
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,892,867 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261461   ⟹   XP_063117531
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,900,429 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261462   ⟹   XP_063117532
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,033 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261463   ⟹   XP_063117533
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,897,665 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261464   ⟹   XP_063117534
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,892,858 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261465   ⟹   XP_063117535
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,031 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261466   ⟹   XP_063117536
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,031 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261467   ⟹   XP_063117537
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,031 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261468   ⟹   XP_063117538
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,036 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261469   ⟹   XP_063117539
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,897,665 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261470   ⟹   XP_063117540
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,036 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261471   ⟹   XP_063117541
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,280 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261473   ⟹   XP_063117543
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,897,697 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261474   ⟹   XP_063117544
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,028 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261475   ⟹   XP_063117545
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,900,422 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261476   ⟹   XP_063117546
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,028 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261477   ⟹   XP_063117547
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,028 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261478   ⟹   XP_063117548
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,028 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261479   ⟹   XP_063117549
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,029 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261480   ⟹   XP_063117550
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,033 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261481   ⟹   XP_063117551
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,031 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261482   ⟹   XP_063117552
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,892,868 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261483   ⟹   XP_063117553
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,031 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261484   ⟹   XP_063117554
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,031 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261485   ⟹   XP_063117555
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,280 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261486   ⟹   XP_063117556
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,029 - 52,288,978 (+)NCBI
RefSeq Acc Id: XM_063261487   ⟹   XP_063117557
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,899,032 - 52,291,830 (+)NCBI
RefSeq Acc Id: XM_063261488   ⟹   XP_063117558
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8651,892,858 - 52,291,830 (+)NCBI
Protein Sequences
Protein RefSeqs NP_446340 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967595 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967596 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967597 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967598 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967599 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967600 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967601 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967603 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967604 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967605 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967606 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967608 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967609 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967610 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967611 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967612 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967614 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967615 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967617 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967618 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117529 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117530 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117531 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117532 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117533 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117534 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117535 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117536 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117537 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117538 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117539 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117540 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117541 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117543 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117544 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117545 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117546 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117547 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117548 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117549 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117550 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117551 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117552 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117553 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117554 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117555 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117556 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117557 (Get FASTA)   NCBI Sequence Viewer  
  XP_063117558 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB40718 (Get FASTA)   NCBI Sequence Viewer  
  AAC52728 (Get FASTA)   NCBI Sequence Viewer  
  EDM03231 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000005905.6
  ENSRNOP00000045413
  ENSRNOP00000045413.6
  ENSRNOP00000084839.1
  ENSRNOP00000087359.1
  ENSRNOP00055007202
  ENSRNOP00060012149
  ENSRNOP00065013209
GenBank Protein P70475 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_446340   ⟸   NM_053888
- UniProtKB: P70475 (UniProtKB/Swiss-Prot),   D4A9W2 (UniProtKB/Swiss-Prot),   P70589 (UniProtKB/Swiss-Prot),   F1M8L4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000045413   ⟸   ENSRNOT00000044310
RefSeq Acc Id: ENSRNOP00000005905   ⟸   ENSRNOT00000005905
RefSeq Acc Id: XP_038967610   ⟸   XM_039111682
- Peptide Label: isoform X5
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967596   ⟸   XM_039111668
- Peptide Label: isoform X1
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967604   ⟸   XM_039111676
- Peptide Label: isoform X1
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967597   ⟸   XM_039111669
- Peptide Label: isoform X1
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967605   ⟸   XM_039111677
- Peptide Label: isoform X1
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967612   ⟸   XM_039111684
- Peptide Label: isoform X11
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967611   ⟸   XM_039111683
- Peptide Label: isoform X6
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967617   ⟸   XM_039111689
- Peptide Label: isoform X15
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967614   ⟸   XM_039111686
- Peptide Label: isoform X12
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967601   ⟸   XM_039111673
- Peptide Label: isoform X1
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967598   ⟸   XM_039111670
- Peptide Label: isoform X1
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967606   ⟸   XM_039111678
- Peptide Label: isoform X1
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967618   ⟸   XM_039111690
- Peptide Label: isoform X17
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967600   ⟸   XM_039111672
- Peptide Label: isoform X1
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967609   ⟸   XM_039111681
- Peptide Label: isoform X5
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967615   ⟸   XM_039111687
- Peptide Label: isoform X13
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967608   ⟸   XM_039111680
- Peptide Label: isoform X4
- UniProtKB: A6HB26 (UniProtKB/TrEMBL),   F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967595   ⟸   XM_039111667
- Peptide Label: isoform X1
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967603   ⟸   XM_039111675
- Peptide Label: isoform X1
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038967599   ⟸   XM_039111671
- Peptide Label: isoform X1
- UniProtKB: F1M8L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000087359   ⟸   ENSRNOT00000103568
RefSeq Acc Id: ENSRNOP00000084839   ⟸   ENSRNOT00000095119
RefSeq Acc Id: XP_063117534   ⟸   XM_063261464
- Peptide Label: isoform X3
- UniProtKB: P70589 (UniProtKB/Swiss-Prot),   P70475 (UniProtKB/Swiss-Prot),   D4A9W2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063117558   ⟸   XM_063261488
- Peptide Label: isoform X18
RefSeq Acc Id: XP_063117530   ⟸   XM_063261460
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063117552   ⟸   XM_063261482
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063117533   ⟸   XM_063261463
- Peptide Label: isoform X2
- UniProtKB: A0A5H1ZRT6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063117539   ⟸   XM_063261469
- Peptide Label: isoform X4
- UniProtKB: A6HB26 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063117543   ⟸   XM_063261473
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063117529   ⟸   XM_063261459
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063117546   ⟸   XM_063261476
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063117547   ⟸   XM_063261477
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063117544   ⟸   XM_063261474
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063117548   ⟸   XM_063261478
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063117549   ⟸   XM_063261479
- Peptide Label: isoform X7
RefSeq Acc Id: XP_063117556   ⟸   XM_063261486
- Peptide Label: isoform X14
RefSeq Acc Id: XP_063117536   ⟸   XM_063261466
- Peptide Label: isoform X3
- UniProtKB: P70589 (UniProtKB/Swiss-Prot),   P70475 (UniProtKB/Swiss-Prot),   D4A9W2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063117551   ⟸   XM_063261481
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063117537   ⟸   XM_063261467
- Peptide Label: isoform X3
- UniProtKB: P70589 (UniProtKB/Swiss-Prot),   P70475 (UniProtKB/Swiss-Prot),   D4A9W2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063117554   ⟸   XM_063261484
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063117535   ⟸   XM_063261465
- Peptide Label: isoform X3
- UniProtKB: P70589 (UniProtKB/Swiss-Prot),   P70475 (UniProtKB/Swiss-Prot),   D4A9W2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063117553   ⟸   XM_063261483
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063117557   ⟸   XM_063261487
- Peptide Label: isoform X16
RefSeq Acc Id: XP_063117532   ⟸   XM_063261462
- Peptide Label: isoform X2
- UniProtKB: A0A5H1ZRT6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063117550   ⟸   XM_063261480
- Peptide Label: isoform X8
RefSeq Acc Id: XP_063117538   ⟸   XM_063261468
- Peptide Label: isoform X4
- UniProtKB: A6HB26 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063117540   ⟸   XM_063261470
- Peptide Label: isoform X4
- UniProtKB: A6HB26 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063117541   ⟸   XM_063261471
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063117555   ⟸   XM_063261485
- Peptide Label: isoform X10
- UniProtKB: A0A8I6A056 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063117545   ⟸   XM_063261475
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063117531   ⟸   XM_063261461
- Peptide Label: isoform X1
Protein Domains
Myelin transcription factor

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P70475-F1-model_v2 AlphaFold P70475 1-1187 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620550 AgrOrtholog
BioCyc Gene G2FUF-37939 BioCyc
Ensembl Genes ENSRNOG00000004269 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00055005769 UniProtKB/Swiss-Prot
  ENSRNOG00060009075 UniProtKB/Swiss-Prot
  ENSRNOG00065010591 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000005905.7 UniProtKB/TrEMBL
  ENSRNOT00000044310.6 UniProtKB/TrEMBL
  ENSRNOT00000095119.1 UniProtKB/TrEMBL
  ENSRNOT00000103568.1 UniProtKB/TrEMBL
  ENSRNOT00055009369 UniProtKB/Swiss-Prot
  ENSRNOT00060015560 UniProtKB/Swiss-Prot
  ENSRNOT00065017263 UniProtKB/Swiss-Prot
Gene3D-CATH 4.10.320.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Myelin_TF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:116668 UniProtKB/Swiss-Prot
NCBI Gene 116668 ENTREZGENE
PANTHER MYELIN TRANSCRIPTION FACTOR 1-LIKE PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MYELIN TRANSCRIPTION FACTOR 1-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam MYT1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C2HC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Myt1l PhenoGen
PROSITE ZF_CCHHC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000004269 RatGTEx
  ENSRNOG00055005769 RatGTEx
  ENSRNOG00060009075 RatGTEx
  ENSRNOG00065010591 RatGTEx
Superfamily-SCOP SSF103637 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A5H1ZRT6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A056 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A7T9_RAT UniProtKB/TrEMBL
  A6HB26 ENTREZGENE, UniProtKB/TrEMBL
  D4A9W2 ENTREZGENE
  F1M8L4 ENTREZGENE, UniProtKB/TrEMBL
  MYT1L_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  P70589 ENTREZGENE
UniProt Secondary D4A9W2 UniProtKB/Swiss-Prot
  P70589 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-02-26 Myt1l  myelin transcription factor 1-like      Symbol and Name status set to approved 625702 APPROVED
2002-08-07 Myt1l  myelin transcription factor 1-like      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_domains contains six Cys-Cys, His-Cys zinc fingers 633486