Gnpat (glyceronephosphate O-acyltransferase) - Rat Genome Database

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Gene: Gnpat (glyceronephosphate O-acyltransferase) Rattus norvegicus
Analyze
Symbol: Gnpat
Name: glyceronephosphate O-acyltransferase
RGD ID: 620179
Description: Predicted to enable glycerone-phosphate O-acyltransferase activity. Involved in several processes, including response to fatty acid; response to nutrient; and response to starvation. Located in peroxisomal membrane. Human ortholog(s) of this gene implicated in rhizomelic chondrodysplasia punctata type 2. Orthologous to human GNPAT (glyceronephosphate O-acyltransferase); PARTICIPATES IN plasmalogen biosynthetic pathway; plasmalogen metabolic pathway; glycerophospholipid metabolic pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2-methoxyethanol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: acyl-CoA:dihydroxyacetonephosphate acyltransferase; acyl-CoA:dihydroxyacetonephosphateacyltransferase; DAP-AT; DHAP-AT; dihydroxyacetone phosphate acyltransferase; glycerone-phosphate O-acyltransferase
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81969,719,707 - 69,746,244 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1969,719,394 - 69,746,244 (+)EnsemblGRCr8
mRatBN7.21952,822,326 - 52,848,872 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1952,822,319 - 52,852,361 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1959,607,051 - 59,633,624 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01960,458,103 - 60,484,680 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01962,533,511 - 62,560,087 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01957,614,813 - 57,640,524 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1957,614,628 - 57,640,726 (+)Ensemblrn6Rnor6.0
Rnor_5.01968,328,052 - 68,353,763 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41955,033,777 - 55,059,491 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1952,189,653 - 52,215,396 (+)NCBICelera
RGSC_v3.11955,038,657 - 55,064,372 (+)NCBI
Cytogenetic Map19q12NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
peroxisomal membrane  (IBA,IDA,IEA,TAS)
peroxisome  (IDA,IEA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. A study of the glycerol phosphate acyltransferase and dihydroxyacetone phosphate acyltransferase activities in rat liver mitochondrial and microsomal fractions. Relative distribution in parenchymal and non-parenchymal cells, effects of N-ethylmaleimide, palmitoyl-coenzyme A concentration, starvation, adrenalectomy and anti-insulin serum treatment. Bates EJ and Saggerson ED, Biochem J. 1979 Sep 15;182(3):751-62.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
4. Proteomic analysis of rat liver peroxisome: presence of peroxisome-specific isozyme of Lon protease. Kikuchi M, etal., J Biol Chem. 2004 Jan 2;279(1):421-8. Epub 2003 Oct 15.
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
7. Acyl-CoA:dihydroxyacetonephosphate acyltransferase: cloning of the human cDNA and resolution of the molecular basis in rhizomelic chondrodysplasia punctata type 2. Ofman R, etal., Hum Mol Genet 1998 May;7(5):847-53.
8. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
9. Online Mendelian Inheritance in Man, OMIM (TM). Online Mendelian Inheritance in Man, OMIM (TM).
10. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
11. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
12. Peroxisomes and ether lipid biosynthesis in rat testis and epididymis. Reisse S, etal., Biol Reprod 2001 Jun;64(6):1689-94.
13. GOA pipeline RGD automated data pipeline
14. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
15. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
16. Studies of dihydroxyacetone phosphate acyltransferase in rat small intestine. Subcellular localization and effect of partially hydrogenated fish oil and clofibrate. Ruyter B, etal., Biochem J. 1992 Mar 1;282 ( Pt 2):565-70.
17. Effect of 3- and 4-thia-substituted fatty acids on glycerolipid metabolism and mitochondrial beta-oxidation in rat liver. Skorve J, etal., Biochem Pharmacol. 1990 Nov 1;40(9):2005-12.
18. Ether lipid biosynthesis: isolation and molecular characterization of human dihydroxyacetonephosphate acyltransferase. Thai TP, etal., FEBS Lett 1997 Dec 29;420(2-3):205-11.
19. Impaired membrane traffic in defective ether lipid biosynthesis. Thai TP, etal., Hum Mol Genet 2001 Jan 15;10(2):127-36.
Additional References at PubMed
PMID:8186247   PMID:10456321   PMID:11792727   PMID:12477932   PMID:12874108   PMID:15687349   PMID:19270340   PMID:19946888   PMID:20178365   PMID:21525035  


Genomics

Comparative Map Data
Gnpat
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81969,719,707 - 69,746,244 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1969,719,394 - 69,746,244 (+)EnsemblGRCr8
mRatBN7.21952,822,326 - 52,848,872 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1952,822,319 - 52,852,361 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1959,607,051 - 59,633,624 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01960,458,103 - 60,484,680 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01962,533,511 - 62,560,087 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01957,614,813 - 57,640,524 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1957,614,628 - 57,640,726 (+)Ensemblrn6Rnor6.0
Rnor_5.01968,328,052 - 68,353,763 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41955,033,777 - 55,059,491 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1952,189,653 - 52,215,396 (+)NCBICelera
RGSC_v3.11955,038,657 - 55,064,372 (+)NCBI
Cytogenetic Map19q12NCBI
GNPAT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381231,241,212 - 231,277,973 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1231,241,196 - 231,277,973 (+)Ensemblhg38GRCh38
GRCh371231,376,958 - 231,413,719 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361229,443,605 - 229,480,156 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341227,683,716 - 227,720,270NCBI
Celera1204,641,787 - 204,678,590 (+)NCBICelera
Cytogenetic Map1q42.2NCBI
HuRef1201,860,306 - 201,897,106 (+)NCBIHuRef
CHM1_11232,650,570 - 232,687,371 (+)NCBICHM1_1
T2T-CHM13v2.01230,624,475 - 230,661,237 (+)NCBIT2T-CHM13v2.0
Gnpat
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398125,589,772 - 125,616,796 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8125,589,772 - 125,616,796 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm388124,863,033 - 124,890,057 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8124,863,033 - 124,890,057 (+)Ensemblmm10GRCm38
MGSCv378127,386,933 - 127,413,957 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv368127,749,177 - 127,776,147 (+)NCBIMGSCv36mm8
Celera8129,171,508 - 129,198,742 (+)NCBICelera
Cytogenetic Map8E2NCBI
cM Map872.81NCBI
Gnpat
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554927,489,080 - 7,519,590 (-)Ensembl
ChiLan1.0NW_0049554927,489,080 - 7,519,590 (-)NCBIChiLan1.0ChiLan1.0
GNPAT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2117,925,131 - 17,961,741 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1118,120,797 - 18,157,389 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01206,794,245 - 206,830,840 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11211,819,259 - 211,855,974 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1211,819,259 - 211,855,885 (+)EnsemblpanPan2panpan1.1
GNPAT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.148,155,186 - 8,190,403 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl48,155,191 - 8,190,229 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha48,147,533 - 8,182,713 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.048,180,644 - 8,215,844 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl48,180,644 - 8,215,139 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.148,184,206 - 8,219,358 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.048,306,165 - 8,341,341 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.048,534,802 - 8,569,933 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Gnpat
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934443,248,868 - 43,276,893 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648419,410,956 - 19,434,929 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493648419,414,094 - 19,434,929 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GNPAT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1459,203,090 - 59,241,247 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11459,203,519 - 59,240,303 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21463,872,123 - 63,904,272 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GNPAT
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12568,518,643 - 68,553,055 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2568,518,300 - 68,553,767 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605570,426,054 - 70,460,430 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gnpat
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477518,410,755 - 18,439,246 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462477518,410,514 - 18,443,169 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Gnpat
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11744,375,354 - 44,401,453 (+)NCBIRrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:303
Count of miRNA genes:191
Interacting mature miRNAs:212
Transcripts:ENSRNOT00000026617
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2313395Anxrr26Anxiety related response QTL 26aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)194438513474246245Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)193253961574246245Rat
5135224Leukc1Leukocyte quantity QTL 1eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)196124916174246245Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)193177788874246245Rat
631840Niddm38Non-insulin dependent diabetes mellitus QTL 383.86blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)191032907674246245Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)194622677874246245Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19219431774246245Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)193236531174246245Rat
1549835Tcas7Tongue tumor susceptibility QTL 70.001tongue integrity trait (VT:0010553)squamous cell carcinoma of the head and neck tumor number (CMO:0001876)194172254674246245Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)193628974246245Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19219431774246245Rat
61423Cia14Collagen induced arthritis QTL 143joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)191083361874246245Rat

Markers in Region
RH129086  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21952,848,909 - 52,849,075 (+)MAPPERmRatBN7.2
Rnor_6.01957,641,205 - 57,641,370NCBIRnor6.0
Rnor_5.01968,354,444 - 68,354,609UniSTSRnor5.0
RGSC_v3.41955,060,172 - 55,060,337UniSTSRGSC3.4
Celera1952,216,077 - 52,216,242UniSTS
RH 3.4 Map19725.7UniSTS
Cytogenetic Map19q12UniSTS
BE116945  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21952,850,678 - 52,850,828 (+)MAPPERmRatBN7.2
Rnor_6.01957,642,974 - 57,643,123NCBIRnor6.0
Rnor_5.01968,356,213 - 68,356,362UniSTSRnor5.0
RGSC_v3.41955,061,941 - 55,062,090UniSTSRGSC3.4
Celera1952,217,846 - 52,217,995UniSTS
RH 3.4 Map19720.9UniSTS
Cytogenetic Map19q12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000026617   ⟹   ENSRNOP00000026617
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1969,719,720 - 69,745,853 (+)Ensembl
mRatBN7.2 Ensembl1952,822,319 - 52,852,361 (+)Ensembl
Rnor_6.0 Ensembl1957,614,628 - 57,640,726 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000096315   ⟹   ENSRNOP00000077229
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1969,724,017 - 69,745,854 (+)Ensembl
mRatBN7.2 Ensembl1952,826,730 - 52,848,473 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000148549   ⟹   ENSRNOP00000099376
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1969,727,011 - 69,746,244 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000165458   ⟹   ENSRNOP00000108879
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1969,719,721 - 69,746,238 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000167276   ⟹   ENSRNOP00000106897
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1969,719,394 - 69,746,238 (+)Ensembl
RefSeq Acc Id: NM_053410   ⟹   NP_445862
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81969,719,707 - 69,746,244 (+)NCBI
mRatBN7.21952,822,326 - 52,848,867 (+)NCBI
Rnor_6.01957,614,813 - 57,640,524 (+)NCBI
Rnor_5.01968,328,052 - 68,353,763 (+)NCBI
RGSC_v3.41955,033,777 - 55,059,491 (+)RGD
Celera1952,189,653 - 52,215,396 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039098042   ⟹   XP_038953970
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81969,727,702 - 69,745,857 (+)NCBI
mRatBN7.21952,829,883 - 52,848,867 (+)NCBI
RefSeq Acc Id: XM_039098043   ⟹   XP_038953971
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81969,721,656 - 69,745,857 (+)NCBI
mRatBN7.21952,824,276 - 52,848,872 (+)NCBI
RefSeq Acc Id: NP_445862   ⟸   NM_053410
- UniProtKB: Q9ES71 (UniProtKB/Swiss-Prot),   A6KJ21 (UniProtKB/TrEMBL),   A0A8I5YBP7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000026617   ⟸   ENSRNOT00000026617
RefSeq Acc Id: XP_038953971   ⟸   XM_039098043
- Peptide Label: isoform X2
- UniProtKB: A0A8I5YBP7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038953970   ⟸   XM_039098042
- Peptide Label: isoform X1
- UniProtKB: A6KJ22 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000077229   ⟸   ENSRNOT00000096315
Ensembl Acc Id: ENSRNOP00000099376   ⟸   ENSRNOT00000148549
Ensembl Acc Id: ENSRNOP00000106897   ⟸   ENSRNOT00000167276
Ensembl Acc Id: ENSRNOP00000108879   ⟸   ENSRNOT00000165458
Protein Domains
Phospholipid/glycerol acyltransferase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9ES71-F1-model_v2 AlphaFold Q9ES71 1-678 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13701242
Promoter ID:EPDNEW_R11765
Type:multiple initiation site
Name:Gnpat_1
Description:glyceronephosphate O-acyltransferase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01957,614,642 - 57,614,702EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620179 AgrOrtholog
BioCyc Gene G2FUF-5228 BioCyc
BioCyc Pathway PWY-7411 [phosphatidate biosynthesis (yeast)] BioCyc
  PWY-7782 [plasmalogen biosynthesis] BioCyc
BioCyc Pathway Image PWY-7411 BioCyc
  PWY-7782 BioCyc
Ensembl Genes ENSRNOG00000019205 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000026617 ENTREZGENE
  ENSRNOT00000026617.7 UniProtKB/Swiss-Prot
  ENSRNOT00000167276 ENTREZGENE
InterPro DHAPAT UniProtKB/Swiss-Prot
  GPAT/DHAPAT UniProtKB/Swiss-Prot
  GPAT/DHAPAT_LPLAT UniProtKB/Swiss-Prot
  GPAT_C UniProtKB/Swiss-Prot
  Plipid/glycerol_acylTrfase UniProtKB/Swiss-Prot
KEGG Report rno:84470 UniProtKB/Swiss-Prot
NCBI Gene 84470 ENTREZGENE
PANTHER DIHYDROXYACETONE PHOSPHATE ACYLTRANSFERASE UniProtKB/Swiss-Prot
  PTHR12563 UniProtKB/Swiss-Prot
Pfam Acyltransferase UniProtKB/Swiss-Prot
  GPAT_C UniProtKB/Swiss-Prot
PhenoGen Gnpat PhenoGen
PIRSF DHAPAT UniProtKB/Swiss-Prot
  GPAT_DHAPAT UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000019205 RatGTEx
SMART PlsC UniProtKB/Swiss-Prot
Superfamily-SCOP Glycerol-3-phosphate (1)-acyltransferase UniProtKB/Swiss-Prot
UniProt A0A8I5YBP7 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0L6Z3_RAT UniProtKB/TrEMBL
  A0ABK0LDX2_RAT UniProtKB/TrEMBL
  A6KJ21 ENTREZGENE, UniProtKB/TrEMBL
  A6KJ22 ENTREZGENE, UniProtKB/TrEMBL
  A6KJ23_RAT UniProtKB/TrEMBL
  GNPAT_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Gnpat  glyceronephosphate O-acyltransferase    acyl-CoA:dihydroxyacetonephosphate acyltransferase  Name updated 1299863 APPROVED
2002-08-07 Gnpat  acyl-CoA:dihydroxyacetonephosphate acyltransferase      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_cellular_localization localized to peroxisomes