Spag4 (sperm associated antigen 4) - Rat Genome Database

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Gene: Spag4 (sperm associated antigen 4) Rattus norvegicus
Analyze
Symbol: Spag4
Name: sperm associated antigen 4
RGD ID: 620151
Description: Enables identical protein binding activity. Predicted to be involved in cell differentiation and spermatogenesis. Located in microtubule. Orthologous to human SPAG4 (sperm associated antigen 4); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC100911109; outer dense fiber-associated protein SPAG4; sperm antigen 4; sperm-associated antigen 4 protein; sperm-associated antigen 4 protein-like; SUN domain-containing protein 4
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83165,040,682 - 165,047,963 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3165,041,134 - 165,045,519 (+)EnsemblGRCr8
mRatBN7.23144,581,006 - 144,587,879 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3144,581,095 - 144,585,435 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3148,446,861 - 148,451,205 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03157,064,133 - 157,068,477 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03154,803,659 - 154,808,003 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03151,609,602 - 151,613,946 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3151,609,602 - 151,613,942 (+)Ensemblrn6Rnor6.0
Rnor_5.03157,974,080 - 157,978,564 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43146,472,609 - 146,476,953 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3143,302,863 - 143,307,207 (+)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Spag4, a novel sperm protein, binds outer dense-fiber protein Odf1 and localizes to microtubules of manchette and axoneme. Shao X, etal., Dev Biol 1999 Jul 1;211(1):109-23.
8. A novel testis-specific gene, SPAG4, whose product interacts specifically with outer dense fiber protein ODF27, maps to human chromosome 20q11.2. Tarnasky H, etal., Cytogenet Cell Genet 1998;81(1):65-7.

Genomics

Comparative Map Data
Spag4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83165,040,682 - 165,047,963 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3165,041,134 - 165,045,519 (+)EnsemblGRCr8
mRatBN7.23144,581,006 - 144,587,879 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3144,581,095 - 144,585,435 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3148,446,861 - 148,451,205 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03157,064,133 - 157,068,477 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03154,803,659 - 154,808,003 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03151,609,602 - 151,613,946 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3151,609,602 - 151,613,942 (+)Ensemblrn6Rnor6.0
Rnor_5.03157,974,080 - 157,978,564 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43146,472,609 - 146,476,953 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3143,302,863 - 143,307,207 (+)NCBICelera
Cytogenetic Map3q42NCBI
SPAG4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382035,615,829 - 35,621,094 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2035,615,829 - 35,621,613 (+)Ensemblhg38GRCh38
GRCh372034,203,751 - 34,209,016 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362033,667,223 - 33,672,379 (+)NCBIBuild 36Build 36hg18NCBI36
Build 342033,667,222 - 33,672,379NCBI
Celera2030,952,104 - 30,957,260 (+)NCBICelera
Cytogenetic Map20q11.22NCBI
HuRef2030,981,190 - 30,986,346 (+)NCBIHuRef
CHM1_12034,105,451 - 34,110,607 (+)NCBICHM1_1
T2T-CHM13v2.02037,336,805 - 37,342,070 (+)NCBIT2T-CHM13v2.0
Spag4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392155,907,108 - 155,911,421 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2155,907,095 - 155,912,537 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm382156,065,188 - 156,069,501 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2156,065,175 - 156,070,617 (+)Ensemblmm10GRCm38
MGSCv372155,890,949 - 155,895,235 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv362155,756,668 - 155,760,665 (+)NCBIMGSCv36mm8
Celera2162,000,620 - 162,004,906 (+)NCBICelera
Cytogenetic Map2H1NCBI
cM Map277.34NCBI
Spag4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542225,840,498 - 25,845,299 (-)Ensembl
ChiLan1.0NW_00495542225,840,302 - 25,844,787 (-)NCBIChiLan1.0ChiLan1.0
SPAG4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22141,346,363 - 41,356,059 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12041,338,265 - 41,349,623 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02031,941,094 - 31,947,725 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12033,059,296 - 33,064,429 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2033,059,302 - 33,064,429 (+)EnsemblpanPan2panpan1.1
SPAG4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12424,547,312 - 24,565,770 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2424,547,488 - 24,551,700 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2424,192,477 - 24,210,910 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02425,239,948 - 25,258,368 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2425,240,077 - 25,244,289 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12424,526,323 - 24,532,457 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02424,621,303 - 24,639,728 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02425,060,729 - 25,079,155 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Spag4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640173,541,234 - 173,546,088 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365615,204,062 - 5,208,189 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365615,203,476 - 5,208,265 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SPAG4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1738,947,718 - 38,954,115 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11738,947,352 - 38,952,363 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21744,276,510 - 44,281,339 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SPAG4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1256,542,715 - 56,548,465 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl256,543,061 - 56,548,438 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660872,884,674 - 2,890,404 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Spag4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248423,824,411 - 3,828,413 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Spag4
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v15135,426,434 - 135,431,058 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Spag4
95 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:202
Count of miRNA genes:127
Interacting mature miRNAs:144
Transcripts:ENSRNOT00000026578, ENSRNOT00000065052
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12879876Bw182Body weight QTL 1820.003body mass (VT:0001259)body weight (CMO:0000012)3141555229186555229Rat
2301411Bp320Blood pressure QTL 3200.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3141555229186555229Rat
1582233Insul10Insulin level QTL 105.40.0015blood insulin amount (VT:0001560)serum insulin level times blood glucose level (CMO:0002040)3133259579178259579Rat
12879872Cm97Cardiac mass QTL 970.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)3141555229186555229Rat
12879873Cm96Cardiac mass QTL 960.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)3141555229186555229Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3151075912189428310Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)3129154923182114333Rat
12879874Cm98Cardiac mass QTL 980.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)3141555229186555229Rat
12879875Kidm64Kidney mass QTL 640.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3141555229186555229Rat
1298068Bp167Blood pressure QTL 1670.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3161492708189428310Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)367641776167835660Rat
61335Bp20Blood pressure QTL 203arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3161799493176036425Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3133134628178134628Rat
1331726Bp208Blood pressure QTL 2083.129arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3161799270187311134Rat
1582213Insul6Insulin level QTL 63.70.0009blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)3155759447189428310Rat
1300173Rf11Renal function QTL 113.38renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)3141508991166376254Rat
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3152055202189428310Rat
10755461Coatc16Coat color QTL 16coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)3142898802187898802Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)379649560177741895Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)3145335553189428310Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3125116475170116475Rat
1582256Insul9Insulin level QTL 94.40.0016blood insulin amount (VT:0001560)absolute change in serum insulin level (CMO:0002038)3155759447189428310Rat
1576306Schws3Schwannoma susceptibility QTL 30.001nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)3139299381184299381Rat
5686842Rf59Renal function QTL 59urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)3122395989167395989Rat
1300159Kidm4Kidney mass QTL 43.83kidney mass (VT:0002707)right kidney wet weight to body weight ratio (CMO:0001953)3141508991177728348Rat
2301971Cm71Cardiac mass QTL 714.63heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)3131036586176036586Rat
631673Iddm13Insulin dependent diabetes mellitus QTL 131.30.663blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)3137114333182114333Rat
1582248Insul7Insulin level QTL 73.90.0041blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)3155759447189428310Rat
2301970Bw81Body weight QTL 815.19body mass (VT:0001259)body weight (CMO:0000012)3131036586176036586Rat
1581546Pur13Proteinuria QTL 132.930.0335urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)398651826167012663Rat
1578666Vnigr1Vascular neointimal growth QTL 14.6artery morphology trait (VT:0002191)artery lumen area (CMO:0001409)3151075912189428310Rat
1578656Vnigr2Vascular neointimal growth QTL 24.2artery morphology trait (VT:0002191)lesioned artery residual lumen area (CMO:0001417)3151075912189428310Rat
12879871Am7Aortic mass QTL 70.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)3141555229186555229Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3144575244189428310Rat
2293087Iddm27Insulin dependent diabetes mellitus QTL 272.68blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)3160357340167835660Rat

Markers in Region
UniSTS:487762  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23144,581,150 - 144,582,647 (+)MAPPERmRatBN7.2
Rnor_6.03152,143,763 - 152,145,259NCBIRnor6.0
Rnor_6.03151,609,658 - 151,611,154NCBIRnor6.0
Rnor_5.03157,974,276 - 157,975,772UniSTSRnor5.0
Rnor_5.03159,545,522 - 159,547,018UniSTSRnor5.0
RGSC_v3.43146,472,665 - 146,474,161UniSTSRGSC3.4
Celera3143,302,919 - 143,304,415UniSTS
Cytogenetic Map3q41UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
14 1 38 145 39 39 21 72 21 6 229 133 11 131 61 88 18 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000026578   ⟹   ENSRNOP00000026578
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3165,041,134 - 165,045,519 (+)Ensembl
mRatBN7.2 Ensembl3144,581,095 - 144,585,435 (+)Ensembl
Rnor_6.0 Ensembl3152,143,811 - 152,148,029 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000065052   ⟹   ENSRNOP00000058827
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3165,041,302 - 165,045,519 (+)Ensembl
mRatBN7.2 Ensembl3144,581,095 - 144,585,435 (+)Ensembl
Rnor_6.0 Ensembl3151,609,602 - 151,613,942 (+)Ensembl
RefSeq Acc Id: NM_031792   ⟹   NP_113980
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83165,041,179 - 165,045,523 (+)NCBI
mRatBN7.23144,581,095 - 144,585,439 (+)NCBI
Rnor_6.03151,609,602 - 151,613,946 (+)NCBI
Rnor_5.03157,974,080 - 157,978,564 (+)NCBI
RGSC_v3.43146,472,609 - 146,476,953 (+)RGD
Celera3143,302,863 - 143,307,207 (+)RGD
Sequence:
RefSeq Acc Id: XM_008762411   ⟹   XP_008760633
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83165,040,682 - 165,045,523 (+)NCBI
mRatBN7.23144,581,283 - 144,587,879 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063284654   ⟹   XP_063140724
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83165,040,682 - 165,045,523 (+)NCBI
RefSeq Acc Id: XM_063284655   ⟹   XP_063140725
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83165,040,682 - 165,047,963 (+)NCBI
RefSeq Acc Id: NP_113980   ⟸   NM_031792
- UniProtKB: O55034 (UniProtKB/Swiss-Prot),   A6KI78 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000058827   ⟸   ENSRNOT00000065052
RefSeq Acc Id: XP_008760633   ⟸   XM_008762411
- Peptide Label: isoform X3
- UniProtKB: A6KI78 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000026578   ⟸   ENSRNOT00000026578
RefSeq Acc Id: XP_063140725   ⟸   XM_063284655
- Peptide Label: isoform X2
- UniProtKB: A6KI78 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063140724   ⟸   XM_063284654
- Peptide Label: isoform X1
- UniProtKB: D3Z9U4 (UniProtKB/TrEMBL),   G3V8K3 (UniProtKB/TrEMBL)
Protein Domains
SUN

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O55034-F1-model_v2 AlphaFold O55034 1-444 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620151 AgrOrtholog
BioCyc Gene G2FUF-47108 BioCyc
Ensembl Genes ENSRNOG00000019566 Ensembl
  ENSRNOG00000048056 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000026578 ENTREZGENE
  ENSRNOT00000065052 ENTREZGENE
Gene3D-CATH Galactose-binding domain-like UniProtKB/Swiss-Prot
InterPro SUN1-5 UniProtKB/Swiss-Prot
  SUN_dom UniProtKB/Swiss-Prot
KEGG Report rno:83623 UniProtKB/Swiss-Prot
NCBI Gene 83623 ENTREZGENE
PANTHER PTHR12911 UniProtKB/Swiss-Prot
  PTHR12911:SF16 UniProtKB/Swiss-Prot
Pfam Sad1_UNC UniProtKB/Swiss-Prot
PhenoGen Spag4 PhenoGen
PROSITE SUN UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000019566 RatGTEx
  ENSRNOG00000048056 RatGTEx
UniProt A0A8J8XCG9_RAT UniProtKB/TrEMBL
  A6KI78 ENTREZGENE, UniProtKB/TrEMBL
  A6KI79_RAT UniProtKB/TrEMBL
  A6KI80_RAT UniProtKB/TrEMBL
  D3Z9U4 ENTREZGENE
  G3V8K3 ENTREZGENE, UniProtKB/TrEMBL
  O55034 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Spag4  sperm associated antigen 4  LOC100911109  sperm-associated antigen 4 protein-like  Data merged from RGD:6495088 737654 PROVISIONAL
2012-07-05 LOC100911109  sperm-associated antigen 4 protein-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2004-09-10 Spag4  sperm associated antigen 4    sperm antigen 4  Name updated 1299863 APPROVED
2002-08-07 Spag4  sperm antigen 4      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_expression mRNA expressed exclusively in spermatids 727271
gene_physical_interaction interacts specifically with Odf1, the outer dense fiber of the sperm tail 727271
gene_process may play a role in protein localization to specific spermatid structures 727271
gene_protein protein masses 49 kDa 727271