Prm2 (protamine 2) - Rat Genome Database

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Gene: Prm2 (protamine 2) Rattus norvegicus
Analyze
Symbol: Prm2
Name: protamine 2
RGD ID: 3409
Description: Predicted to enable cadmium ion binding activity and zinc ion binding activity. Predicted to be involved in nucleus organization and spermatid development. Predicted to be located in male germ cell nucleus. Predicted to be part of nucleosome. Predicted to be active in nucleus. Orthologous to human PRM2 (protamine 2); INTERACTS WITH 17beta-estradiol; 2,2',4,4'-Tetrabromodiphenyl ether; allethrin.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: PROTA2; protamine-2; sperm histone P2; sperm protamine P2; sperm protamine-P2
RGD Orthologs
Human
Mouse
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8105,383,208 - 5,383,949 (+)NCBIGRCr8
mRatBN7.2104,876,285 - 4,877,026 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl104,873,372 - 4,877,026 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx109,572,973 - 9,573,409 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0109,094,089 - 9,094,525 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0104,732,370 - 4,732,806 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0104,950,484 - 4,950,920 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl104,950,484 - 4,950,920 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0103,776,970 - 3,777,406 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4104,813,692 - 4,814,128 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1104,813,691 - 4,814,128 (+)NCBI
Celera103,897,994 - 3,898,430 (+)NCBICelera
Cytogenetic Map10q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Prm2RatCharcot-Marie-Tooth disease type 1C  ISOPRM2 (Homo sapiens)8554872ClinVar Annotator: match by term: Charcot-Marie-Tooth disease type 1CClinVarPMID:28492532
Prm2RatLandau-Kleffner syndrome  ISOPRM2 (Homo sapiens)8554872ClinVar Annotator: match by term: Landau-Kleffner syndromeClinVarPMID:28492532
Prm2RatMHC class II deficiency  ISOPRM2 (Homo sapiens)8554872ClinVar Annotator: match by term: MHC class II deficiencyClinVarPMID:26271388 more ...

1 to 20 of 35 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Prm2Rat1,2-dichloroethane increases expressionISOPrm2 (Mus musculus)6480464ethylene dichloride results in increased expression of PRM2 mRNACTDPMID:28960355
Prm2Rat17beta-estradiol multiple interactionsEXP 6480464bisphenol A inhibits the reaction [Estradiol results in decreased expression of PRM2 mRNA]CTDPMID:27174447
Prm2Rat17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of PRM2 mRNACTDPMID:27174447
Prm2Rat2,2',4,4'-Tetrabromodiphenyl ether decreases expressionEXP 64804642 more ...CTDPMID:28712647
Prm2Ratallethrin multiple interactionsEXP 6480464[cypermethrin co-treated with decamethrin co-treated with fenvalerate co-treated with cyhalothrin co-treated with Allethrins] affects the expression of PRM2 mRNA and [cypermethrin co-treated with decamethrin co-treated with fenvalerate co-treated with cyhalothrin co-treated with Allethrins] results in decreased expression of PRM2 mRNACTDPMID:33396045 and PMID:34896426
Prm2Ratammonium chloride affects expressionEXP 6480464Ammonium Chloride affects the expression of PRM2 mRNACTDPMID:16483693
Prm2Ratbenzo[a]pyrene affects expressionISOPrm2 (Mus musculus)6480464Benzo(a)pyrene affects the expression of PRM2 mRNACTDPMID:22641617
Prm2Ratbenzo[a]pyrene increases methylationISOPRM2 (Homo sapiens)6480464Benzo(a)pyrene results in increased methylation of PRM2 promoterCTDPMID:27901495
Prm2Ratbis(2-ethylhexyl) phthalate decreases expressionISOPrm2 (Mus musculus)6480464Diethylhexyl Phthalate results in decreased expression of PRM2 mRNACTDPMID:33162236
Prm2Ratbisphenol A decreases expressionEXP 6480464bisphenol A results in decreased expression of PRM2 mRNACTDPMID:25181051
Prm2Ratbisphenol A decreases expressionISOPrm2 (Mus musculus)6480464bisphenol A results in decreased expression of PRM2 proteinCTDPMID:31489793
Prm2Ratbisphenol A multiple interactionsEXP 6480464bisphenol A inhibits the reaction [Estradiol results in decreased expression of PRM2 mRNA]CTDPMID:27174447
Prm2Ratbutanal increases expressionISOPRM2 (Homo sapiens)6480464butyraldehyde results in increased expression of PRM2 mRNACTDPMID:26079696
Prm2Ratcadmium atom multiple interactionsISOPRM2 (Homo sapiens)6480464[Cadmium Chloride results in increased abundance of Cadmium] which results in increased expression of PRM2 mRNACTDPMID:35301059
Prm2Ratcadmium dichloride increases expressionISOPrm2 (Mus musculus)6480464Cadmium Chloride results in increased expression of PRM2 mRNACTDPMID:24982889
Prm2Ratcadmium dichloride multiple interactionsISOPRM2 (Homo sapiens)6480464[Cadmium Chloride results in increased abundance of Cadmium] which results in increased expression of PRM2 mRNACTDPMID:35301059
Prm2Ratcarmustine decreases expressionISOPRM2 (Homo sapiens)6480464Carmustine results in decreased expression of PRM2 mRNACTDPMID:15980968
Prm2Ratcopper atom increases expressionEXP 6480464Copper deficiency results in increased expression of PRM2 mRNACTDPMID:26033743
Prm2Ratcopper(0) increases expressionEXP 6480464Copper deficiency results in increased expression of PRM2 mRNACTDPMID:26033743
Prm2Ratcyhalothrin multiple interactionsEXP 6480464[cypermethrin co-treated with decamethrin co-treated with fenvalerate co-treated with cyhalothrin co-treated with Allethrins] affects the expression of PRM2 mRNA and [cypermethrin co-treated with decamethrin co-treated with fenvalerate co-treated with cyhalothrin co-treated with Allethrins] results in decreased expression of PRM2 mRNACTDPMID:33396045 and PMID:34896426

1 to 20 of 35 rows

Biological Process
1 to 11 of 11 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Prm2Ratcell differentiation involved_inIEAUniProtKB-KW:KW-02211600115GO_REF:0000043UniProtGO_REF:0000043
Prm2Ratchromosome condensation involved_inIEAUniProtKB-KW:KW-02261600115GO_REF:0000043UniProtGO_REF:0000043
Prm2Ratchromosome organization involved_inIEAInterPro:IPR0004921600115GO_REF:0000002InterProGO_REF:0000002
Prm2Ratnucleus organization involved_inIBAMGI:97766 and PANTHER:PTN0004820591600115GO_REF:0000033GO_CentralGO_REF:0000033
Prm2Ratnucleus organization acts_upstream_of_or_withinISOPrm2 (Mus musculus)1624291MGI:3039800 PMID:11326282RGDPMID:11326282
Prm2Ratspermatid development involved_inIEAInterPro:IPR0004921600115GO_REF:0000002InterProGO_REF:0000002
Prm2Ratspermatid development acts_upstream_of_or_withinISOPrm2 (Mus musculus)1624291MGI:3039800 PMID:11326282RGDPMID:11326282
Prm2Ratspermatid development involved_inIBAMGI:97766 and PANTHER:PTN0004820591600115GO_REF:0000033GO_CentralGO_REF:0000033
Prm2Ratspermatogenesis involved_inISSUniProtKB:P079781600115GO_REF:0000024UniProtGO_REF:0000024
Prm2Ratspermatogenesis involved_inISOPrm2 (Mus musculus)1624291 PMID:12620939RGDPMID:12620939
Prm2Ratspermatogenesis involved_inIEAUniProtKB-KW:KW-07441600115GO_REF:0000043UniProtGO_REF:0000043
1 to 11 of 11 rows

Cellular Component
1 to 10 of 10 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Prm2Ratchromosome located_inIEAUniProtKB-SubCell:SL-04681600115GO_REF:0000044UniProtGO_REF:0000044
Prm2Ratchromosome located_inIEAUniProtKB-KW:KW-01581600115GO_REF:0000043UniProtGO_REF:0000043
Prm2Ratcytoplasm NOT|located_inISOPrm2 (Mus musculus)1624291 PMID:8185929RGDPMID:8185929
Prm2Ratmale germ cell nucleus located_inISOPrm2 (Mus musculus)1624291 PMID:14680821RGDPMID:14680821
Prm2Ratnucleosome part_ofIEAUniProtKB-KW:KW-05441600115GO_REF:0000043UniProtGO_REF:0000043
Prm2Ratnucleus located_inISOPRM2 (Sus scrofa)1624291 PMID:1627265RGDPMID:1627265
Prm2Ratnucleus located_inIEAUniProtKB-SubCell:SL-01911600115GO_REF:0000044UniProtGO_REF:0000044
Prm2Ratnucleus located_inIEAUniProtKB-KW:KW-05391600115GO_REF:0000043UniProtGO_REF:0000043
Prm2Ratnucleus is_active_inIBAMGI:97766 and PANTHER:PTN0004820591600115GO_REF:0000033GO_CentralGO_REF:0000033
Prm2Ratnucleus located_inISOPrm2 (Mus musculus)1624291 PMID:10369260 more ...RGDPMID:10369260 more ...
1 to 10 of 10 rows

Molecular Function

  


1 to 9 of 9 rows
#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Sequence analysis of the conserved protamine gene cluster shows that it contains a fourth expressed gene. Schluter G, etal., Mol Reprod Dev 1996 Jan;43(1):1-6.
8. Nucleotide sequence of the rat protamine 2 gene. Tanhauser SM and Hecht NB, Nucleic Acids Res 1989 Jun 12;17(11):4395.
9. Tentative Sequence Identification Numbers Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
1 to 9 of 9 rows
PMID:1627265   PMID:2243113   PMID:8185929   PMID:10369260   PMID:11326282   PMID:12620939   PMID:14680821   PMID:17261847   PMID:21630459  



Prm2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8105,383,208 - 5,383,949 (+)NCBIGRCr8
mRatBN7.2104,876,285 - 4,877,026 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl104,873,372 - 4,877,026 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx109,572,973 - 9,573,409 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0109,094,089 - 9,094,525 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0104,732,370 - 4,732,806 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0104,950,484 - 4,950,920 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl104,950,484 - 4,950,920 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0103,776,970 - 3,777,406 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4104,813,692 - 4,814,128 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1104,813,691 - 4,814,128 (+)NCBI
Celera103,897,994 - 3,898,430 (+)NCBICelera
Cytogenetic Map10q11NCBI
PRM2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381611,275,639 - 11,276,480 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1611,275,639 - 11,276,480 (-)EnsemblGRCh38hg38GRCh38
GRCh371611,369,496 - 11,370,337 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361611,276,994 - 11,277,838 (-)NCBINCBI36Build 36hg18NCBI36
Build 341611,276,997 - 11,277,809NCBI
Celera1611,538,883 - 11,539,727 (-)NCBICelera
Cytogenetic Map16p13.13NCBI
HuRef1611,287,224 - 11,288,068 (-)NCBIHuRef
CHM1_11611,369,399 - 11,370,243 (-)NCBICHM1_1
T2T-CHM13v2.01611,311,859 - 11,312,700 (-)NCBIT2T-CHM13v2.0
Prm2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391610,609,241 - 10,609,969 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1610,609,244 - 10,613,998 (-)EnsemblGRCm39 Ensembl
GRCm381610,791,377 - 10,792,105 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1610,791,380 - 10,796,134 (-)EnsemblGRCm38mm10GRCm38
MGSCv371610,791,474 - 10,792,190 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361610,704,959 - 10,705,675 (-)NCBIMGSCv36mm8
Celera1611,418,811 - 11,419,527 (-)NCBICelera
Cytogenetic Map16A1NCBI
cM Map165.84NCBI
PRM2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21811,824,801 - 11,825,700 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11615,595,263 - 15,596,125 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01610,217,586 - 10,218,446 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11611,439,417 - 11,440,265 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1611,439,417 - 11,440,265 (-)Ensemblpanpan1.1panPan2
PRM2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1631,492,208 - 31,492,852 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl631,492,208 - 31,492,852 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha632,875,074 - 32,875,718 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0631,674,848 - 31,675,492 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl631,674,848 - 31,675,492 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1631,488,145 - 31,488,789 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0631,362,449 - 31,363,093 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0631,786,678 - 31,787,322 (+)NCBIUU_Cfam_GSD_1.0
PRM2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl331,864,350 - 31,864,961 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1331,864,350 - 31,864,959 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2332,653,946 - 32,654,670 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PRM2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1510,752,537 - 10,753,414 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl510,752,804 - 10,753,273 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606819,410,480 - 19,411,489 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Prm2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248248,459,655 - 8,462,971 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Prm2
4 total Variants

Predicted Target Of
Summary Value
Count of predictions:82
Count of miRNA genes:71
Interacting mature miRNAs:73
Transcripts:ENSRNOT00000003450
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 10 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
634329Pia15Pristane induced arthritis QTL 153.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10124158324Rat
2293680Bss40Bone structure and strength QTL 405.660.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)10135225947Rat
7387235Uae41Urinary albumin excretion QTL 415.260.1874urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)10129497586Rat
10401803Kidm50Kidney mass QTL 50kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1041834445418344Rat
1576304Schws7Schwannoma susceptibility QTL 70.0115nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)10476552719816042Rat
7411611Foco17Food consumption QTL 1718.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)10142315980Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1074336463851208Rat
1549898Neuinf3Neuroinflammation QTL 326.4nervous system integrity trait (VT:0010566)MHC Class II RT1A-positive spinal cord ventral horn area to total spinal cord ventral horn area ratio (CMO:0001980)1034063205387112Rat
634327Hc4Hypercalciuria QTL 42.4urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)10138328221Rat
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10180676123Rat

1 to 10 of 10 rows
RH94725  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2104,876,873 - 4,876,979 (+)MAPPERmRatBN7.2
Rnor_6.0104,950,960 - 4,951,065NCBIRnor6.0
Rnor_5.0103,777,446 - 3,777,551UniSTSRnor5.0
RGSC_v3.4104,814,168 - 4,814,273UniSTSRGSC3.4
Celera103,898,470 - 3,898,575UniSTS
Cytogenetic Map10q11UniSTS
RH94726  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2104,876,095 - 4,876,196 (+)MAPPERmRatBN7.2
Rnor_6.0104,950,182 - 4,950,282NCBIRnor6.0
Rnor_5.0103,776,668 - 3,776,768UniSTSRnor5.0
RGSC_v3.4104,813,390 - 4,813,490UniSTSRGSC3.4
Celera103,897,692 - 3,897,792UniSTS
Cytogenetic Map10q11UniSTS
UniSTS:498766  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2104,876,885 - 4,876,960 (+)MAPPERmRatBN7.2
Rnor_6.0104,950,972 - 4,951,046NCBIRnor6.0
Rnor_5.0103,777,458 - 3,777,532UniSTSRnor5.0
RGSC_v3.4104,814,180 - 4,814,254UniSTSRGSC3.4
Celera103,898,482 - 3,898,556UniSTS
Cytogenetic Map10q11UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
5 6 3 29 24 27 13 6 13 49 14 26 13 36 14



Ensembl Acc Id: ENSRNOT00000003450   ⟹   ENSRNOP00000003450
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl104,873,372 - 4,877,026 (+)Ensembl
Rnor_6.0 Ensembl104,950,484 - 4,950,920 (+)Ensembl
RefSeq Acc Id: NM_012873   ⟹   NP_037005
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8105,383,208 - 5,383,949 (+)NCBI
mRatBN7.2104,876,285 - 4,877,026 (+)NCBI
Rnor_6.0104,950,484 - 4,950,920 (+)NCBI
Rnor_5.0103,776,970 - 3,777,406 (+)NCBI
RGSC_v3.4104,813,692 - 4,814,128 (+)RGD
Celera103,897,994 - 3,898,430 (+)RGD
Sequence:
Protein RefSeqs NP_037005 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein CAA32804 (Get FASTA)   NCBI Sequence Viewer  
  CAA87062 (Get FASTA)   NCBI Sequence Viewer  
  EDL96208 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000003450
  ENSRNOP00000003450.1
GenBank Protein P11248 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_037005   ⟸   NM_012873
- UniProtKB: P11248 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSRNOP00000003450   ⟸   ENSRNOT00000003450

Name Modeler Protein Id AA Range Protein Structure
AF-P11248-F1-model_v2 AlphaFold P11248 1-104 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 15 of 15 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-26145 BioCyc
Ensembl Genes ENSRNOG00000002539 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000003450 ENTREZGENE
  ENSRNOT00000003450.3 UniProtKB/Swiss-Prot
InterPro PRM2 UniProtKB/Swiss-Prot
KEGG Report rno:25345 UniProtKB/Swiss-Prot
NCBI Gene 25345 ENTREZGENE
PANTHER PROTAMINE-2 UniProtKB/Swiss-Prot
  PTHR21341 UniProtKB/Swiss-Prot
Pfam Protamine_P2 UniProtKB/Swiss-Prot
PhenoGen Prm2 PhenoGen
RatGTEx ENSRNOG00000002539 RatGTEx
TIGR TC219441
UniProt A6K4I6_RAT UniProtKB/TrEMBL
  P11248 ENTREZGENE, UniProtKB/Swiss-Prot
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Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2002-06-10 Prm2  Protamine 2      Symbol and Name status set to approved 70586 APPROVED