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Gene: Myh13 (myosin heavy chain 13) Rattus norvegicus

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Symbol:

Myh13

Name:

myosin heavy chain 13

RGD ID:

3137

Description:

Predicted to enable actin filament binding activity and microfilament motor activity. Predicted to be involved in muscle contraction. Predicted to act upstream of or within cellular response to starvation. Predicted to be located in myofibril. Predicted to be part of myosin II complex. Predicted to be active in cytoplasm and myosin filament. Orthologous to human MYH13 (myosin heavy chain 13); PARTICIPATES IN myocarditis pathway; INTERACTS WITH ammonium chloride; bisphenol A; Cuprizon.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC103693367; MHCEO; MyHC; myosin heavy polypeptide 13; myosin heavy polypeptide 13 skeletal muscle; myosin, heavy chain 13, skeletal muscle; myosin, heavy polypeptide 13, skeletal muscle; myosin-13

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MYH13 (myosin heavy chain 13)	HGNC	HomoloGene, Panther
Mus musculus (house mouse):	Myh13 (myosin, heavy polypeptide 13, skeletal muscle)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Myh13 (myosin heavy chain 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MYH13 (myosin heavy chain 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MYH13 (myosin heavy chain 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Myh13 (myosin heavy chain 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MYH13 (myosin heavy chain 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	LOC103242382 (myosin-13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Myh13 (myosin heavy chain 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Myh13 (myosin heavy chain 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	MYH13 (myosin heavy chain 13)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	MYH13 (myosin heavy chain 13)	Alliance	DIOPT (HGNC)
Mus musculus (house mouse):	Myh13 (myosin, heavy polypeptide 13, skeletal muscle)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	myhz1.1 (myosin, heavy polypeptide 1.1, skeletal muscle)	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	myhz1.3 (myosin, heavy polypeptide 1.3, skeletal muscle)	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	myhz2 (myosin, heavy polypeptide 2, fast muscle specific)	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	myhz1.2 (myosin, heavy polypeptide 1.2, skeletal muscle)	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	myhc4 (myosin heavy chain 4)	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Saccharomyces cerevisiae (baker's yeast):	MYO1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Mhc	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	myo-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	myo-2	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	myo-3	Alliance	DIOPT (InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	myo-5	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	unc-54	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	myh13	Alliance	DIOPT (Hieranoid\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	myh7	Alliance	DIOPT (Hieranoid\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	myhz1.1l	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	LOC100493121	Alliance	DIOPT (Hieranoid\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	LOC100495212	Alliance	DIOPT (Hieranoid\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	LOC100495968	Alliance	DIOPT (Ensembl Compara\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	LOC100495212	Alliance	DIOPT (Hieranoid\|PANTHER\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	52,511,773 - 52,567,951 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	52,511,590 - 52,567,951 (+)	Ensembl				GRCr8
mRatBN7.2	10	52,012,779 - 52,068,960 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	52,009,425 - 52,068,951 (+)	Ensembl				mRatBN7.2
Rnor_6.0	10	53,873,089 - 53,920,698 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	10	53,623,690 - 53,677,976 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	54,017,681 - 54,087,530 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	51,195,383 - 51,247,442 (+)	NCBI		Celera
RGSC_v3.1	10	54,097,044 - 54,101,145 (+)	NCBI
Cytogenetic Map	10	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

osteoarthritis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,4,4'-trichlorobiphenyl (ISO)

ammonium chloride (EXP)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

Butylbenzyl phthalate (ISO)

CGP 52608 (ISO)

Cuprizon (EXP)

gentamycin (EXP)

manganese(II) chloride (EXP)

ozone (ISO)

PCB138 (ISO)

perfluorohexanesulfonic acid (ISO)

phenobarbital (ISO)

pioglitazone (ISO)

XL147 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to starvation (ISO)

muscle contraction (IBA)

Cellular Component

cytoplasm (IBA)

myofibril (IEA,ISO)

myosin complex (IEA)

myosin filament (IBA,IEA)

myosin II complex (IBA)

Molecular Function

actin binding (IEA)

actin filament binding (IBA,IEA)

ATP binding (IEA)

cytoskeletal motor activity (IEA)

microfilament motor activity (IBA)

nucleotide binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

myocarditis pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
2.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
3.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	Complete nucleotide and encoded amino acid sequence of a mammalian myosin heavy chain gene. Evidence against intron-dependent evolution of the rod.	Strehler EE, etal., J Mol Biol 1986 Aug 5;190(3):291-317.
8.	Tentative Sequence Identification Numbers	Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
9.	Comparative sequence analysis of the complete human sarcomeric myosin heavy chain family: implications for functional diversity.	Weiss A, etal., J Mol Biol 1999 Jul 2;290(1):61-75.
10.	The human extraocular muscle myosin heavy chain gene (MYH13) maps to the cluster of fast and developmental myosin genes on chromosome 17.	Winters LM, etal., Genomics 1998 Nov 15;54(1):188-9.

Additional References at PubMed

PMID:8634332	PMID:19056867	PMID:19319192	PMID:19531352

Genomics

Comparative Map Data

Myh13
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	52,511,773 - 52,567,951 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	52,511,590 - 52,567,951 (+)	Ensembl				GRCr8
mRatBN7.2	10	52,012,779 - 52,068,960 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	52,009,425 - 52,068,951 (+)	Ensembl				mRatBN7.2
Rnor_6.0	10	53,873,089 - 53,920,698 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	10	53,623,690 - 53,677,976 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	54,017,681 - 54,087,530 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	51,195,383 - 51,247,442 (+)	NCBI		Celera
RGSC_v3.1	10	54,097,044 - 54,101,145 (+)	NCBI
Cytogenetic Map	10	q24	NCBI

MYH13
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	10,300,865 - 10,373,006 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	10,300,865 - 10,373,130 (-)	Ensembl			hg38	GRCh38
GRCh37	17	10,204,182 - 10,276,323 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	10,144,908 - 10,217,047 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	17	10,144,907 - 10,217,047	NCBI
Celera	17	10,235,039 - 10,307,189 (-)	NCBI		Celera
Cytogenetic Map	17	p13.1	NCBI
HuRef	17	10,103,838 - 10,175,793 (-)	NCBI		HuRef
CHM1_1	17	10,214,021 - 10,286,151 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	10,208,390 - 10,280,510 (-)	NCBI		T2T-CHM13v2.0

Myh13
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	67,217,929 - 67,262,413 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	67,212,484 - 67,262,412 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	11	67,327,103 - 67,371,587 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	67,321,658 - 67,371,586 (+)	Ensembl			mm10	GRCm38
MGSCv37	11	67,140,605 - 67,185,004 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	11	67,143,298 - 67,187,697 (+)	NCBI		MGSCv36	mm8
Celera	11	74,270,729 - 74,315,095 (+)	NCBI		Celera
Cytogenetic Map	11	B3	NCBI
cM Map	11	40.85	NCBI

Myh13
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955467	6,816,393 - 6,872,754 (+)	Ensembl
ChiLan1.0	NW_004955467	6,816,393 - 6,872,754 (+)	NCBI	ChiLan1.0	ChiLan1.0

MYH13
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	63,384,518 - 63,447,782 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	68,194,921 - 68,258,215 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	41,288,536 - 41,351,827 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	46,035,614 - 46,098,864 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	46,035,614 - 46,098,800 (+)	Ensembl			panPan2	panpan1.1

MYH13
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	34,617,987 - 34,669,349 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	34,617,971 - 34,669,589 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	34,754,533 - 34,805,879 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	34,722,866 - 34,774,253 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	34,722,874 - 34,828,536 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	34,688,421 - 34,739,771 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	34,645,863 - 34,697,217 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	34,826,759 - 34,878,147 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Myh13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	49,730,299 - 49,788,271 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936595	3,204,573 - 3,255,494 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936595	3,204,487 - 3,262,459 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MYH13
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	55,046,888 - 55,103,400 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	12	55,051,990 - 55,103,415 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	57,877,160 - 57,933,842 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LOC103242382
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	9,647,080 - 9,726,679 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	9,647,777 - 9,709,659 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666059	11,633,355 - 11,695,898 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Myh13
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624786	12,676,386 - 12,732,672 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624786	12,676,384 - 12,732,672 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Myh13
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	9	46,929,115 - 46,985,186 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Myh13
408 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	136
Count of miRNA genes:	61
Interacting mature miRNAs:	65
Transcripts:	ENSRNOT00000043412, ENSRNOT00000073051
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61441	Btemp1	Thermal response to stress QTL 1	4		body temperature trait (VT:0005535)	core body temperature (CMO:0001036)	10	35893451	64140567	Rat
1549846	Scl47	Serum cholesterol level QTL 47	3.6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	10	51071897	96071897	Rat
152025229	Scl83	Serum cholesterol level QTL 83	4.33		blood cholesterol amount (VT:0000180)		10	36211556	69161158	Rat
1578779	Tcas10	Tongue tumor susceptibility QTL 10	3.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	10	31796281	76796281	Rat
152025227	Bw195	Body weight QTL 195	5.73		body mass (VT:0001259)		10	47489017	69161158	Rat
631564	Apr3	Acute phase response QTL 3	3.9		blood interleukin-6 amount (VT:0008595)	plasma interleukin-6 level (CMO:0001927)	10	15776754	60776754	Rat
1298069	Bp168	Blood pressure QTL 168	5.5		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	10	27023535	98502431	Rat
2293669	Bmd33	Bone mineral density QTL 33	4.5	0.0001	femur strength trait (VT:0010010)	femoral neck polar moment of inertia (CMO:0001670)	10	27443787	72443787	Rat
152025224	Bw193	Body weight QTL 193	6.47		body mass (VT:0001259)		10	52162433	75582749	Rat
631552	Vetf2	Vascular elastic tissue fragility QTL 2	4.5	0.0002	aorta elastic tissue integrity trait (VT:0010556)	artery internal elastic lamina non-tumorous lesion count (CMO:0001913)	10	35509383	91417879	Rat
631554	Bp133	Blood pressure QTL 133		0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	1250554	64349221	Rat
61325	Aia5	Adjuvant induced arthritis QTL 5		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
2293679	Bmd30	Bone mineral density QTL 30	3.5	0.0001	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	10	27443787	72443787	Rat
1298078	Stresp5	Stress response QTL 5	2.99	0.00025	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	10	42546145	107713808	Rat
2298544	Neuinf9	Neuroinflammation QTL 9	4.6		nervous system integrity trait (VT:0010566)	spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)	10	19939207	64939207	Rat
61332	Eau3	Experimental allergic uveoretinitis QTL 3		0.004	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	10	18035782	63035782	Rat
61463	Bp12	Blood pressure QTL 12	6.3	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	41831278	86831278	Rat
1579919	Bp281	Blood pressure QTL 281		0.01	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50464802	95464802	Rat
8694173	Bw149	Body weight QTL 149	4.38	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	10	44939359	89939359	Rat
2300218	Hpcl2	Hepatic cholesterol level QTL 2			liver cholesterol amount (VT:0010498)	liver cholesterol level (CMO:0001597)	10	45529164	96099749	Rat
1598852	Anxrr19	Anxiety related response QTL 19	5.07		body movement coordination trait (VT:0005424)	number of rearing movements in an experimental apparatus (CMO:0001752)	10	18668419	63668419	Rat
1581497	Esta1	Estrogen-induced thymic atrophy QTL 1			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	10	21833758	61843633	Rat
10450493	Bp382	Blood pressure QTL 382		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50860288	95860288	Rat
724527	Bp148	Blood pressure QTL 148		0.0001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	28950353	73950353	Rat
1358897	Stresp6	Stress response QTL 6	4.17	0.022	blood norepinephrine amount (VT:0005663)	plasma norepinephrine level (CMO:0001010)	10	35893263	64653589	Rat
1331762	Rf40	Renal function QTL 40	3.873		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	10	29800910	64653589	Rat
2300171	Bmd58	Bone mineral density QTL 58	4.9	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	10	27443787	72443787	Rat
61354	Pia10	Pristane induced arthritis QTL 10		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
2301967	Cm73	Cardiac mass QTL 73	4.55		heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	14991535	86964295	Rat
70188	BpQTLcluster1	Blood pressure QTL cluster 1	4.864		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	1	42823274	87823274	Rat
9589030	Epfw9	Epididymal fat weight QTL 9	19.24	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	10	44939359	89939359	Rat
2316949	Gluco60	Glucose level QTL 60	3.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	10	14991535	107556066	Rat
2293652	Bmd22	Bone mineral density QTL 22	4.9	0.0001	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	10	27443787	72443787	Rat
70198	BpQTLcluster9	Blood pressure QTL cluster 9	2.94		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	42823274	87823274	Rat
724556	Pur2	Proteinuria QTL 2	5.5		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	10	22931373	91127454	Rat
8662860	Vetf10	Vascular elastic tissue fragility QTL 10			artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	10	6660923	73950353	Rat
2306792	Ean4	Experimental allergic neuritis QTL 4	4		nervous system integrity trait (VT:0010566)	IFNG-secreting splenocyte count (CMO:0002122)	10	49495492	94495492	Rat
61387	Bp1	Blood pressure QTL 1	5.1		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	10	52269185	107713808	Rat
70223	Bp57	Blood pressure QTL 57	5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	14653541	59653541	Rat
1354587	Kidm21	Kidney mass QTL 21	3.3		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	10	15533012	73695498	Rat
634329	Pia15	Pristane induced arthritis QTL 15	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	24662123	73695339	Rat
70224	Eae3	Experimental allergic encephalomyelitis QTL 3	4.1		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	10	27023535	61843633	Rat
2298480	Eau7	Experimental allergic uveoretinitis QTL 7		0.0049	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	10	35509383	80509383	Rat
1331791	Cm31	Cardiac mass QTL 31	3.84606		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	10	29800910	91417879	Rat
2298495	Eae23	Experimental allergic encephalomyelitis QTL 23	16.93		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis duration (CMO:0001424)	10	16175525	61175525	Rat
2313087	Bmd80	Bone mineral density QTL 80	3.2	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	10	20110614	65110614	Rat
631530	Tls3	T-lymphoma susceptibility QTL 3	0	0.0001	thymus integrity trait (VT:0010555)	percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)	10	27587226	96099902	Rat
2289985	Bp305	Blood pressure QTL 305			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	29076978	74076978	Rat
631532	Cm50	Cardiac mass QTL 50	6.6		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	10	18035782	63035782	Rat
8552805	Bw145	Body weight QTL 145	2.2		body mass (VT:0001259)	change in body weight to body weight ratio (CMO:0002216)	10	43608793	88608793	Rat
631267	Cia20	Collagen induced arthritis QTL 20	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
2293705	Bmd25	Bone mineral density QTL 25	7.1	0.0001	femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	10	27443787	72443787	Rat
1600371	Mcs21	Mammary carcinoma susceptibility QTL 21	3		mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	10	29377046	52699134	Rat
631269	Cia22	Collagen induced arthritis QTL 22	8.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40535708	107713808	Rat
1576308	Schws1	Schwannoma susceptibility QTL 1		0.0041	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	10	40535708	107713808	Rat
631268	Cia21	Collagen induced arthritis QTL 21	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	14991535	107713808	Rat
7207811	Bmd90	Bone mineral density QTL 90	5.2		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	10	49943710	94943710	Rat
1576311	Pia26	Pristane induced arthritis QTL 26			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	31129113	76129113	Rat
631270	Cia23	Collagen induced arthritis QTL 23	3.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40535708	107713808	Rat
7411614	Foco18	Food consumption QTL 18		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	10	44939359	89939359	Rat
631547	Bp87	Blood pressure QTL 87	4.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	47869129	92869129	Rat
61427	Cia16	Collagen induced arthritis QTL 16	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	6864618	96620484	Rat
12880050	Am10	Aortic mass QTL 10		0.016	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	39503487	84503487	Rat
2292436	Bp310	Blood pressure QTL 310			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50604677	95604677	Rat
6893342	Cm78	Cardiac mass QTL 78	0.1	0.88	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	10	35509383	88177745	Rat
2313055	Bw96	Body weight QTL 96	3.6	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	10	20110614	65110614	Rat
631542	Bp82	Blood pressure QTL 82	6.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	27023535	99451848	Rat

Markers in Region

AU047489

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	10	53,913,520 - 53,913,786	NCBI	Rnor6.0
Rnor_5.0	10	53,663,831 - 53,664,097	UniSTS	Rnor5.0
RGSC_v3.4	10	54,071,878 - 54,072,144	UniSTS	RGSC3.4
Celera	10	51,235,644 - 51,235,910	UniSTS
Cytogenetic Map	10	q24	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

circulatory system	ectoderm	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	sensory system	visual system
4	19	38	13	9	11	25	2	8	8

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001427462	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767922	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008775759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF075250	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000115541 ⟹ ENSRNOP00000092842

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	52,511,590 - 52,567,426 (+)	Ensembl
mRatBN7.2 Ensembl	10	52,012,590 - 52,068,435 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118051 ⟹ ENSRNOP00000091446

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	52,511,773 - 52,567,951 (+)	Ensembl
mRatBN7.2 Ensembl	10	52,009,425 - 52,068,951 (+)	Ensembl

RefSeq Acc Id:

NM_001427462 ⟹ NP_001414391

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	52,511,773 - 52,567,951 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001414391	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAC83243	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000091446
	ENSRNOP00000091446.1
	ENSRNOP00000092842.1

Ensembl Acc Id:

ENSRNOP00000092842 ⟸ ENSRNOT00000115541

Ensembl Acc Id:

ENSRNOP00000091446 ⟸ ENSRNOT00000118051

RefSeq Acc Id:	NP_001414391 ⟸ NM_001427462
- UniProtKB:	A0A8I6AIQ9 (UniProtKB/TrEMBL), A0A8I6AFM0 (UniProtKB/TrEMBL)

Protein Domains

Myosin motor Myosin N-terminal SH3-like

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:3137	AgrOrtholog
Ensembl Genes	ENSRNOG00000067378	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000115541.2	UniProtKB/TrEMBL
	ENSRNOT00000118051	ENTREZGENE
	ENSRNOT00000118051.2	UniProtKB/TrEMBL
Gene3D-CATH	1.10.10.820	UniProtKB/TrEMBL
	1.20.5.340	UniProtKB/TrEMBL
	1.20.5.370	UniProtKB/TrEMBL
	1.20.5.4820	UniProtKB/TrEMBL
	1.20.58.530	UniProtKB/TrEMBL
	2.30.30.360	UniProtKB/TrEMBL
	3.40.850.10	UniProtKB/TrEMBL
	6.10.250.2420	UniProtKB/TrEMBL
	Myosin VI head, motor domain, U50 subdomain	UniProtKB/TrEMBL
InterPro	Kinesin_motor_dom_sf	UniProtKB/TrEMBL
	Myh13_MYSc	UniProtKB/TrEMBL
	Myosin_head_motor_dom	UniProtKB/TrEMBL
	Myosin_N	UniProtKB/TrEMBL
	Myosin_S1_N	UniProtKB/TrEMBL
	Myosin_tail	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	XRCC4-like_C	UniProtKB/TrEMBL
NCBI Gene	Myh13	ENTREZGENE
PANTHER	MYOSIN HEAVY CHAIN, NON-MUSCLE	UniProtKB/TrEMBL
	MYOSIN-13	UniProtKB/TrEMBL
Pfam	Myosin_head	UniProtKB/TrEMBL
	Myosin_N	UniProtKB/TrEMBL
	Myosin_tail_1	UniProtKB/TrEMBL
PhenoGen	Myh13	PhenoGen
PRINTS	MYOSINHEAVY	UniProtKB/TrEMBL
PROSITE	MYOSIN_MOTOR	UniProtKB/TrEMBL
	PS50096	UniProtKB/TrEMBL
	SH3_LIKE	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000067378	RatGTEx
SMART	MYSc	UniProtKB/TrEMBL
Superfamily-SCOP	Myosin rod fragments	UniProtKB/TrEMBL
	SSF52540	UniProtKB/TrEMBL
	Tropomyosin	UniProtKB/TrEMBL
TIGR	TC204117
UniProt	A0A8I6AFM0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AIQ9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Myh13	myosin heavy chain 13	LOC103693367	myosin-13	Data merged from RGD:9170104	737654	PROVISIONAL
2016-06-29	Myh13	myosin heavy chain 13	Myh13	myosin, heavy chain 13, skeletal muscle	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2014-08-25	LOC103693367	myosin-13			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-10-23	Myh13	myosin, heavy chain 13, skeletal muscle	Myh13	myosin, heavy polypeptide 13, skeletal muscle	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-09-10	Myh13	myosin, heavy polypeptide 13, skeletal muscle		myosin heavy polypeptide 13	Name updated	1299863	APPROVED
2002-06-10	Myh13	myosin heavy polypeptide 13			Name updated	70584	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_expression	expressed in embryonic skeletal muscle	728979
gene_expression	expressed in extraocular muscles between postnatal E17 and adult stages	1302215
gene_expression	absent in global fibers	1302216
gene_function	may indirectly enable saccades to drive orbital muscle contraction by increasing the rate of relaxation in the opposing orbital layer	1302216
gene_homology	shares high sequence homology with human and mouse myh13 genes	1302214

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)