Klrd1 (killer cell lectin like receptor D1) - Rat Genome Database

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Gene: Klrd1 (killer cell lectin like receptor D1) Rattus norvegicus
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Symbol: Klrd1
Name: killer cell lectin like receptor D1
RGD ID: 2978
Description: Predicted to enable HLA-E specific inhibitory MHC class Ib receptor activity; MHC protein complex binding activity; and protein antigen binding activity. Predicted to be involved in regulation of leukocyte mediated cytotoxicity and stimulatory C-type lectin receptor signaling pathway. Predicted to act upstream of or within natural killer cell mediated immunity. Predicted to be located in plasma membrane. Predicted to be part of receptor complex. Predicted to be active in external side of plasma membrane. Orthologous to human KLRD1 (killer cell lectin like receptor D1); PARTICIPATES IN antigen processing and presentation pathway; graft-versus-host disease pathway; INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Cd94; CD94 antigen (located within the rat natural killer gene complex); killer cell lectin-like receptor, subfamily D, member 1; natural killer cells antigen CD94
RGD Orthologs
Human
Mouse
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Candidate Gene For: Oia7
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84164,730,833 - 164,742,539 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl4164,730,856 - 164,742,538 (+)EnsemblGRCr8
mRatBN7.24163,044,920 - 163,056,568 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4163,045,067 - 163,056,518 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx4169,279,872 - 169,291,324 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04165,062,828 - 165,074,281 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04163,696,876 - 163,708,329 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.04163,358,355 - 163,369,925 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4163,358,009 - 163,369,854 (+)Ensemblrn6Rnor6.0
Rnor_5.04212,001,159 - 212,012,721 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.44166,867,721 - 166,879,170 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera4151,724,908 - 151,736,357 (+)NCBICelera
RGSC_v3.14167,112,656 - 167,124,105 (+)NCBI
RH 3.4 Map41013.4RGD
Cytogenetic Map4q42NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Molecular characterization of a gene in the rat homologous to human CD94. Dissen E, etal., Eur J Immunol 1997 Aug;27(8):2080-6.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
4. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. GOA pipeline RGD automated data pipeline
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Comprehensive gene review and curation RGD comprehensive gene curation
11. Tentative Sequence Identification Numbers Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
Additional References at PubMed
PMID:12477932   PMID:14634004   PMID:14707119   PMID:16973387   PMID:18448674   PMID:22084441   PMID:25631937  


Genomics

Comparative Map Data
Klrd1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84164,730,833 - 164,742,539 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl4164,730,856 - 164,742,538 (+)EnsemblGRCr8
mRatBN7.24163,044,920 - 163,056,568 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4163,045,067 - 163,056,518 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx4169,279,872 - 169,291,324 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04165,062,828 - 165,074,281 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04163,696,876 - 163,708,329 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.04163,358,355 - 163,369,925 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4163,358,009 - 163,369,854 (+)Ensemblrn6Rnor6.0
Rnor_5.04212,001,159 - 212,012,721 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.44166,867,721 - 166,879,170 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera4151,724,908 - 151,736,357 (+)NCBICelera
RGSC_v3.14167,112,656 - 167,124,105 (+)NCBI
RH 3.4 Map41013.4RGD
Cytogenetic Map4q42NCBI
KLRD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381210,238,961 - 10,329,608 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1210,226,058 - 10,329,608 (+)Ensemblhg38GRCh38
GRCh371210,391,560 - 10,482,207 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361210,351,684 - 10,359,227 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341210,351,683 - 10,359,227NCBI
Celera1215,618,875 - 15,631,673 (+)NCBICelera
Cytogenetic Map12p13.2NCBI
HuRef1210,200,191 - 10,213,063 (+)NCBIHuRef
CHM1_11210,426,445 - 10,439,240 (+)NCBICHM1_1
T2T-CHM13v2.01210,125,682 - 10,216,423 (+)NCBIT2T-CHM13v2.0
Klrd1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396129,565,055 - 129,575,738 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6129,568,745 - 129,575,738 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm386129,588,092 - 129,598,775 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6129,591,782 - 129,598,775 (+)Ensemblmm10GRCm38
MGSCv376129,543,508 - 129,548,671 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv366129,554,455 - 129,564,465 (+)NCBIMGSCv36mm8
Celera6131,318,310 - 131,323,267 (+)NCBICelera
Cytogenetic Map6F3NCBI
cM Map663.42NCBI
KLRD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21015,716,821 - 15,814,041 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11215,716,192 - 15,803,644 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01210,277,685 - 10,364,056 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11210,529,810 - 10,607,677 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1210,598,705 - 10,606,547 (+)EnsemblpanPan2panpan1.1
KLRD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12735,700,879 - 35,707,270 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2735,701,185 - 35,706,720 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2710,917,005 - 10,922,517 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02736,046,480 - 36,053,285 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2736,046,795 - 36,052,521 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12735,929,289 - 35,934,599 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02735,957,633 - 35,963,149 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02710,445,018 - 10,450,350 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
LOC101955362
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494597,170,947 - 97,176,186 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936902302,821 - 307,648 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936902302,811 - 309,379 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KLRD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl561,666,654 - 61,673,129 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1561,662,083 - 61,673,109 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2564,389,292 - 64,395,189 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KLRD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11110,181,681 - 10,192,544 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660892,258,865 - 2,270,269 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Klrd1
46 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:184
Count of miRNA genes:132
Interacting mature miRNAs:138
Transcripts:ENSRNOT00000055827
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4146370897184426481Rat
724558Plsm2Polydactyly-luxate syndrome (PLS) morphotypes QTL 20.0003hindlimb integrity trait (VT:0010563)hind foot phalanges count (CMO:0001949)4134095016179095016Rat
1582237Kidm34Kidney mass QTL 3440.0001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)4149763204169799698Rat
6478757Anxrr44Anxiety related response QTL 440.01087locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4146370897184426481Rat
1358364Sradr4Stress Responsive Adrenal Weight QTL 44.92adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)4131384565176384565Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)427730518170099664Rat
61451Ciaa4CIA Autoantibody QTL 43.1blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)4123870974168870974Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4140059299181024663Rat
6478700Anxrr33Anxiety related response QTL 330.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat
1298524Oia8Oil induced arthritis QTL 8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4140059299184426481Rat
10053718Scort25Serum corticosterone level QTL 252.150.0097blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)4157292416184426481Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)460916264184426481Rat
737821Hcar9Hepatocarcinoma resistance QTL 93.7liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)4106848959168870974Rat
634335Anxrr16Anxiety related response QTL 167.22locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)494638356168870820Rat
7411558Bw133Body weight QTL 13313.840.001body mass (VT:0001259)body weight gain (CMO:0000420)4127263297172263297Rat
6478778Anxrr51Anxiety related response QTL 510.25384locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4126334185171334185Rat
10401796Kidm48Kidney mass QTL 48kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)4147299608184426481Rat
6478718Anxrr34Anxiety related response QTL 340.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat
6478782Anxrr52Anxiety related response QTL 520.02091locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
631511Pia7Pristane induced arthritis QTL 74.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4123870974168870974Rat
634347Hcar8Hepatocarcinoma resistance QTL 85.8liver integrity trait (VT:0010547)liver tumorous lesion area to total liver area ratio (CMO:0001075)4124700988169700988Rat
6478720Alc23Alcohol consumption QTL 230.00509drinking behavior trait (VT:0001422)ethanol drink intake rate to body weight ratio (CMO:0001616)4155834926184426481Rat
6478785Anxrr53Anxiety related response QTL 530.01397locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
738031Alc14Alcohol consumption QTL 147.60.00003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)460916264174095838Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)4100752691179366077Rat
1581566Eae21Experimental allergic encephalomyelitis QTL 216.2body mass (VT:0001259)maximum body weight loss to initial body weight ratio (CMO:0001400)4137447185182447185Rat
1578674Bmd12Bone mineral density QTL 123.8femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)4137430611182430611Rat
6478728Anxrr36Anxiety related response QTL 360.01061locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)460916264184426481Rat
1358202Gluco11Glucose level QTL 112.40.02adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)486709649168870974Rat
61422Cia13Collagen induced arthritis QTL 134.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4134199006168870974Rat
634342Cia24Collagen induced arthritis QTL 244.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4148121375176967367Rat
6478733Anxrr37Anxiety related response QTL 370.00095locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
737978Pia23Pristane induced arthritis QTL 235.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4123870974168870974Rat
61362Oia2Oil induced arthritis QTL 20.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4140059299184426481Rat
6478737Anxrr38Anxiety related response QTL 380.00159locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
2293659Bmd35Bone mineral density QTL 354.50.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)4160623982184426481Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)412212457182430611Rat
6478748Anxrr42Anxiety related response QTL 420.28008locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat
12798525Anxrr57Anxiety related response QTL 573.210.05locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4148834094168870974Rat

Markers in Region
RH142187  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24163,056,238 - 163,056,407 (+)MAPPERmRatBN7.2
Rnor_6.04163,369,645 - 163,369,813NCBIRnor6.0
Rnor_5.04212,012,441 - 212,012,609UniSTSRnor5.0
RGSC_v3.44166,878,890 - 166,879,058UniSTSRGSC3.4
Celera4151,736,077 - 151,736,245UniSTS
RH 3.4 Map41013.4UniSTS
Cytogenetic Map4q42UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 64 135 91 90 59 92 59 6 350 186 8 109 81 91 31 2 2

Sequence


Ensembl Acc Id: ENSRNOT00000082064   ⟹   ENSRNOP00000074715
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl4164,730,856 - 164,742,533 (+)Ensembl
mRatBN7.2 Ensembl4163,045,067 - 163,056,518 (+)Ensembl
Rnor_6.0 Ensembl4163,358,009 - 163,369,854 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000101395   ⟹   ENSRNOP00000088037
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl4164,735,617 - 164,742,538 (+)Ensembl
mRatBN7.2 Ensembl4163,049,594 - 163,056,518 (+)Ensembl
RefSeq Acc Id: NM_012745   ⟹   NP_036877
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84164,731,090 - 164,742,539 (+)NCBI
mRatBN7.24163,045,067 - 163,056,519 (+)NCBI
Rnor_6.04163,358,476 - 163,369,925 (+)NCBI
Rnor_5.04212,001,159 - 212,012,721 (+)NCBI
RGSC_v3.44166,867,721 - 166,879,170 (+)RGD
Celera4151,724,908 - 151,736,357 (+)RGD
Sequence:
RefSeq Acc Id: XM_006237078   ⟹   XP_006237140
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84164,730,833 - 164,742,535 (+)NCBI
mRatBN7.24163,044,920 - 163,056,568 (+)NCBI
Rnor_6.04163,358,355 - 163,369,848 (+)NCBI
Rnor_5.04212,001,159 - 212,012,721 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_036877 (Get FASTA)   NCBI Sequence Viewer  
  XP_006237140 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC10220 (Get FASTA)   NCBI Sequence Viewer  
  AAH86393 (Get FASTA)   NCBI Sequence Viewer  
  EDM01723 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000074715
  ENSRNOP00000074715.1
GenBank Protein O35778 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_036877   ⟸   NM_012745
- UniProtKB: O35778 (UniProtKB/Swiss-Prot),   A0A8I6AHW6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006237140   ⟸   XM_006237078
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AHW6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000074715   ⟸   ENSRNOT00000082064
Ensembl Acc Id: ENSRNOP00000088037   ⟸   ENSRNOT00000101395
Protein Domains
C-type lectin

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O35778-F1-model_v2 AlphaFold O35778 1-179 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2978 AgrOrtholog
BioCyc Gene G2FUF-42771 BioCyc
Ensembl Genes ENSRNOG00000060246 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000082064 ENTREZGENE
  ENSRNOT00000082064.2 UniProtKB/Swiss-Prot
Gene3D-CATH 3.10.100.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7303354 IMAGE-MGC_LOAD
InterPro C-type_lectin-like UniProtKB/Swiss-Prot
  C-type_lectin-like/link_sf UniProtKB/Swiss-Prot
  CTDL_fold UniProtKB/Swiss-Prot
  NKG2/CD94_NK_receptors UniProtKB/Swiss-Prot
  NKR-like_CTLD UniProtKB/Swiss-Prot
KEGG Report rno:25110 UniProtKB/Swiss-Prot
MGC_CLONE MGC:105493 IMAGE-MGC_LOAD
NCBI Gene 25110 ENTREZGENE
PANTHER C-TYPE LECTIN PROTEINS UniProtKB/Swiss-Prot
  NATURAL KILLER CELLS ANTIGEN CD94 UniProtKB/Swiss-Prot
Pfam Lectin_C UniProtKB/Swiss-Prot
PhenoGen Klrd1 PhenoGen
PROSITE C_TYPE_LECTIN_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000060246 RatGTEx
SMART CLECT UniProtKB/Swiss-Prot
Superfamily-SCOP SSF56436 UniProtKB/Swiss-Prot
TIGR TC214750
UniProt A0A8I6AHW6 ENTREZGENE, UniProtKB/TrEMBL
  A6IM66_RAT UniProtKB/TrEMBL
  KLRD1_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-20 Klrd1  killer cell lectin like receptor D1  Klrd1  killer cell lectin-like receptor, subfamily D, member 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2002-06-10 Klrd1  CD94 antigen (located within the rat natural killer gene complex)      Symbol and Name status set to approved 70586 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_homology shows 54.2% identity to human CD94 633116
gene_protein 179 amino acids 633116