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Gene: Dgkb (diacylglycerol kinase, beta) Rattus norvegicus

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Symbol:

Dgkb

Name:

diacylglycerol kinase, beta

RGD ID:

2488

Description:

Enables ATP-dependent diacylglycerol kinase activity. Involved in diacylglycerol metabolic process; lipid phosphorylation; and phosphatidic acid biosynthetic process. Is active in glutamatergic synapse. Is extrinsic component of postsynaptic density membrane. Orthologous to human DGKB (diacylglycerol kinase beta); PARTICIPATES IN glycerolipid metabolic pathway; glycerophospholipid metabolic pathway; phosphatidylinositol 3-kinase signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 4,4'-sulfonyldiphenol.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

90 kDa diacylglycerol kinase; DAG kinase beta; Dagk; DGK-beta; Diacylglycerol kinase 90kDa; diacylglycerol kinase beta; diacylglycerol kinase beta 90kDa; diacylglycerol kinase beta, 90kDa; diglyceride kinase beta

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DGKB (diacylglycerol kinase beta)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Dgkb (diacylglycerol kinase, beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dgkb (diacylglycerol kinase beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DGKB (diacylglycerol kinase beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DGKB (diacylglycerol kinase beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Dgkb (diacylglycerol kinase beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DGKB (diacylglycerol kinase beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DGKB (diacylglycerol kinase beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dgkb (diacylglycerol kinase beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Dgkb (diacylglycerol kinase beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	DGKB (diacylglycerol kinase beta)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Dgkb (diacylglycerol kinase, beta)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	dgkb (diacylglycerol kinase, beta)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	dgkb (diacylglycerol kinase, beta)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Dgk	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Dgk	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	dgk-3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	dgk-3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	dgkb	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	dgkb	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	60,368,101 - 61,124,420 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	60,368,519 - 61,124,420 (+)	Ensembl				GRCr8
mRatBN7.2	6	54,640,948 - 55,397,210 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	54,641,614 - 55,397,043 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	54,944,919 - 55,700,844 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	55,259,803 - 56,015,739 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	54,718,536 - 55,474,194 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	57,516,351 - 58,277,385 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	57,516,713 - 58,277,279 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	67,113,446 - 67,580,128 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	6	67,693,661 - 67,868,706 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	56,715,327 - 57,479,656 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	53,755,433 - 54,502,520 (+)	NCBI		Celera
RGSC_v3.1	6	56,718,452 - 57,482,782 (+)	NCBI
RH 3.4 Map	6	394.3	RGD
Cytogenetic Map	6	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

atrial fibrillation (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

4,4'-sulfonyldiphenol (EXP,ISO)

6-propyl-2-thiouracil (EXP)

8-Br-cAMP (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

alpha-Zearalanol (EXP)

atrazine (EXP)

Azoxymethane (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP,ISO)

Butylbenzyl phthalate (ISO)

C60 fullerene (EXP)

cadmium dichloride (EXP)

carbon nanotube (ISO)

dextran sulfate (ISO)

dibutyl phthalate (ISO)

diethyl phthalate (ISO)

diisobutyl phthalate (ISO)

diisononyl phthalate (ISO)

dimethylarsinic acid (ISO)

dioxygen (EXP)

ethanol (ISO)

fenvalerate (EXP)

flavonoids (EXP)

folic acid (ISO)

GSK-J4 (ISO)

lipopolysaccharide (ISO)

methamphetamine (EXP)

mono(2-ethylhexyl) phthalate (ISO)

N-nitrosodiethylamine (EXP)

niclosamide (ISO)

okadaic acid (ISO)

paracetamol (ISO)

paraquat (ISO)

perfluorohexanesulfonic acid (ISO)

perfluorononanoic acid (ISO)

perfluorooctanoic acid (EXP)

phenethyl caffeate (EXP)

progesterone (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

sodium arsenite (ISO)

Theaflavin 3,3'-digallate (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

valproic acid (EXP,ISO)

vanadium atom (ISO)

vanadium(0) (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

diacylglycerol metabolic process (IBA,IDA)

glycerolipid metabolic process (IEA,ISO)

intracellular signal transduction (IBA)

lipid metabolic process (IEA)

lipid phosphorylation (IDA,ISO)

modulation of chemical synaptic transmission (IEA,ISO)

phosphatidic acid biosynthetic process (IBA,IDA)

phosphatidic acid metabolic process (IDA)

phospholipase C-activating G protein-coupled receptor signaling pathway (IEA)

regulation of postsynapse organization (IEA,ISO)

response to bacterium (ISO)

signal transduction (IEA)

Cellular Component

cytoplasm (IEA)

cytosol (ISO)

extrinsic component of postsynaptic density membrane (IDA,IEP)

glutamatergic synapse (IDA,IEA,IEP,ISO)

nucleus (ISO)

plasma membrane (IBA,IEA,ISO,TAS)

postsynaptic membrane (IEA)

Schaffer collateral - CA1 synapse (IEA,ISO)

Molecular Function

ATP binding (IEA)

ATP-dependent diacylglycerol kinase activity (IBA,IDA,IEA,ISO)

calcium ion binding (IEA)

kinase activity (IEA)

lipid binding (ISO)

metal ion binding (IEA)

nucleotide binding (IEA)

transferase activity (IEA)

zinc ion binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

glycerolipid metabolic pathway (IEA)

glycerophospholipid metabolic pathway (IEA)

phosphatidylinositol 3-kinase signaling pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Molecular cloning and characterization of the human diacylglycerol kinase beta (DGKbeta) gene: alternative splicing generates DGKbeta isotypes with different properties.	Caricasole A, etal., J Biol Chem. 2002 Feb 15;277(7):4790-6. Epub 2001 Nov 21.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Molecular cloning and expression of a 90-kDa diacylglycerol kinase that predominantly localizes in neurons.	Goto K and Kondo H, Proc Natl Acad Sci U S A 1993 Aug 15;90(16):7598-602.
4.	Diacylglycerol kinase beta accumulates on the perisynaptic site of medium spiny neurons in the striatum.	Hozumi Y, etal., Eur J Neurosci. 2008 Dec;28(12):2409-22.
5.	KEGG: Kyoto Encyclopedia of Genes and Genomes	KEGG
6.	High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence.	Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
7.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
8.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
9.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
10.	GOA pipeline	RGD automated data pipeline
11.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
12.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
13.	Evaluations of the selectivities of the diacylglycerol kinase inhibitors R59022 and R59949 among diacylglycerol kinase isozymes using a new non-radioactive assay method.	Sato M, etal., Pharmacology. 2013;92(1-2):99-107. doi: 10.1159/000351849. Epub 2013 Aug 16.
14.	Tentative Sequence Identification Numbers	Tentative Sequence Data IDs. TIGR Gene Index, Rat Data

Additional References at PubMed

PMID:12832407	PMID:15896305	PMID:16019106	PMID:19691842	PMID:19826069	PMID:20657643	PMID:22627129	PMID:23012479	PMID:23467923	PMID:23503970	PMID:30053369

Genomics

Comparative Map Data

Dgkb
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	60,368,101 - 61,124,420 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	60,368,519 - 61,124,420 (+)	Ensembl				GRCr8
mRatBN7.2	6	54,640,948 - 55,397,210 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	54,641,614 - 55,397,043 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	54,944,919 - 55,700,844 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	55,259,803 - 56,015,739 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	54,718,536 - 55,474,194 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	57,516,351 - 58,277,385 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	57,516,713 - 58,277,279 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	67,113,446 - 67,580,128 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	6	67,693,661 - 67,868,706 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	56,715,327 - 57,479,656 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	53,755,433 - 54,502,520 (+)	NCBI		Celera
RGSC_v3.1	6	56,718,452 - 57,482,782 (+)	NCBI
RH 3.4 Map	6	394.3	RGD
Cytogenetic Map	6	q21	NCBI

DGKB
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	14,145,049 - 14,974,858 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	14,145,049 - 14,974,833 (-)	Ensembl			hg38	GRCh38
GRCh37	7	14,184,674 - 15,014,483 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	14,153,770 - 14,847,413 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	7	13,988,847 - 14,654,128	NCBI
Celera	7	14,163,789 - 14,859,377 (-)	NCBI		Celera
Cytogenetic Map	7	p21.2	NCBI
HuRef	7	14,066,966 - 14,764,852 (-)	NCBI		HuRef
CHM1_1	7	14,184,411 - 14,880,671 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	14,277,079 - 15,107,587 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	14,235,562 - 14,932,596 (-)	NCBI

Dgkb
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	37,930,169 - 38,684,238 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	37,867,725 - 38,684,238 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	12	37,880,169 - 38,634,239 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	37,817,726 - 38,634,239 (+)	Ensembl			mm10	GRCm38
MGSCv37	12	38,607,292 - 39,359,997 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	12	38,390,971 - 39,143,797 (+)	NCBI		MGSCv36	mm8
Celera	12	39,316,859 - 40,057,925 (+)	NCBI		Celera
Cytogenetic Map	12	A3	NCBI
cM Map	12	17.11	NCBI

Dgkb
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955410	17,676,930 - 18,243,869 (-)	Ensembl
ChiLan1.0	NW_004955410	17,677,375 - 18,304,409 (-)	NCBI	ChiLan1.0	ChiLan1.0

DGKB
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	18,981,332 - 19,816,891 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	67,306,052 - 68,141,614 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	14,803,023 - 15,638,280 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	14,142,951 - 14,896,676 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	14,165,933 - 14,969,825 (-)	Ensembl			panPan2	panpan1.1

DGKB
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	28,916,630 - 29,609,138 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	28,918,351 - 29,537,303 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	28,434,629 - 29,133,432 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	28,827,965 - 29,521,435 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	14	28,826,426 - 29,521,331 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	14	28,918,649 - 29,617,633 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	28,647,672 - 29,348,080 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	28,958,514 - 29,660,097 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Dgkb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	73,288,180 - 74,005,408 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936546	963,064 - 1,615,984 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936546	964,387 - 1,615,928 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DGKB
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	83,569,932 - 84,510,087 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	83,571,927 - 84,358,712 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	92,175,666 - 92,485,017 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DGKB
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	43,176,715 - 43,929,833 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	43,176,989 - 43,746,258 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666042	60,567,411 - 61,318,935 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dgkb
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624739	15,186,115 - 15,821,907 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624739	15,185,294 - 15,821,293 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Dgkb
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	7	51,149,152 - 51,863,944 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Dgkb
6942 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	441
Count of miRNA genes:	238
Interacting mature miRNAs:	313
Transcripts:	ENSRNOT00000063874
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
9590290	Uminl2	Urine mineral level QTL 2	3.96	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	6	44510974	89510974	Rat
634318	Bw118	Body weight QTL 118	3.55		abdominal fat pad mass (VT:1000711)	abdominal fat pad weight (CMO:0000088)	6	39028659	63457441	Rat
4889933	Bss88	Bone structure and strength QTL 88	3.8		tibia size trait (VT:0100001)	tibia total bone volume (CMO:0001724)	6	53684921	98684921	Rat
634307	Bp141	Blood pressure QTL 141	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	40957564	85957564	Rat
10401812	Kidm54	Kidney mass QTL 54			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	6	20097635	65097635	Rat
1331743	Uae28	Urinary albumin excretion QTL 28	4.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	6	45153786	90153786	Rat
8552910	Pigfal5	Plasma insulin-like growth factor 1 level QTL 5	4.3		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	6	22653889	67653889	Rat
5684992	Bmd83	Bone mineral density QTL 82	4.8		tibia mineral mass (VT:1000283)	bone mineral content (CMO:0001554)	6	53684921	98684921	Rat
10401800	Kidm49	Kidney mass QTL 49			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	6	20097635	65097635	Rat
1331779	Rf38	Renal function QTL 38	2.876		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	6	31185002	76185002	Rat
737827	Hcar11	Hepatocarcinoma resistance QTL 11	4.4		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	6	46050607	116278722	Rat
724513	Uae14	Urinary albumin excretion QTL 14	6.5		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	46047353	91047353	Rat
2293839	Kiddil2	Kidney dilation QTL 2	4.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	26618314	86868070	Rat
1576309	Emca7	Estrogen-induced mammary cancer QTL 7	4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	20859430	113082285	Rat
9590140	Scort4	Serum corticosterone level QTL 4	14.49	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	44510974	89510974	Rat
2301964	Bp323	Blood pressure QTL 323	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	1	86868070	Rat
9590306	Scort18	Serum corticosterone level QTL 18	2.88	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	44510974	89510974	Rat
1578665	Bss16	Bone structure and strength QTL 16	4.4		femur morphology trait (VT:0000559)	bone trabecular cross-sectional area (CMO:0002311)	6	33328841	78328841	Rat
2293841	Kiddil4	Kidney dilation QTL 4	4.4		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	26618314	86868070	Rat
1641898	Colcr4	Colorectal carcinoma resistance QTL4	3.71	0.0007	intestine integrity trait (VT:0010554)	well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)	6	30937632	75937632	Rat
1578668	Bmd14	Bone mineral density QTL 14	3.8		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	6	33328841	78328841	Rat
6893340	Cm77	Cardiac mass QTL 77	0.26	0.57	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	6	39028659	86867923	Rat
5684963	Bss99	Bone structure and strength QTL 99	3.1		tibia area (VT:1000281)	tibia area measurement (CMO:0001382)	6	53684921	98684921	Rat
70199	Coreg1	Compensatory renal growth QTL 1	11.8		kidney mass (VT:0002707)	compensatory renal growth score (CMO:0001894)	6	14599473	63457687	Rat
2301972	Bp325	Blood pressure QTL 325	4.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	16089372	61967788	Rat
1300143	Rf14	Renal function QTL 14	2.92		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	6	40163183	85163183	Rat
1354664	Slep2	Serum leptin concentration QTL 2	4.49		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	6	22288257	67288257	Rat

Markers in Region

D6Rat26

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	54,641,001 - 54,641,141 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	57,516,400 - 57,516,539	NCBI	Rnor6.0
Rnor_5.0	6	67,112,834 - 67,112,973	UniSTS	Rnor5.0
RGSC_v3.4	6	56,714,714 - 56,714,969	RGD	RGSC3.4
RGSC_v3.4	6	56,714,715 - 56,714,854	UniSTS	RGSC3.4
Celera	6	53,754,821 - 53,754,960	UniSTS
RGSC_v3.1	6	56,717,841 - 56,717,980	RGD
RH 3.4 Map	6	395.5	RGD
RH 3.4 Map	6	395.5	UniSTS
RH 2.0 Map	6	579.9	RGD
SHRSP x BN Map	6	40.9199	RGD
Cytogenetic Map	6	q21	UniSTS

D6Got70

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	55,224,992 - 55,225,108 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	58,104,802 - 58,104,917	NCBI	Rnor6.0
Rnor_5.0	6	67,696,162 - 67,696,277	UniSTS	Rnor5.0
RGSC_v3.4	6	57,302,954 - 57,303,070	RGD	RGSC3.4
RGSC_v3.4	6	57,302,955 - 57,303,070	UniSTS	RGSC3.4
Celera	6	54,332,731 - 54,332,846	UniSTS
RGSC_v3.1	6	57,306,081 - 57,306,196	RGD
RH 3.4 Map	6	391.1	UniSTS
RH 3.4 Map	6	391.1	RGD
RH 2.0 Map	6	569.1	RGD
Cytogenetic Map	6	q21	UniSTS

D6Arb11

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	54,856,132 - 54,856,244 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	57,732,401 - 57,732,512	NCBI	Rnor6.0
Rnor_5.0	6	67,327,923 - 67,328,034	UniSTS	Rnor5.0
RGSC_v3.4	6	56,930,193 - 56,930,305	RGD	RGSC3.4
RGSC_v3.4	6	56,930,194 - 56,930,305	UniSTS	RGSC3.4
Celera	6	53,969,571 - 53,969,682	UniSTS
RGSC_v3.1	6	56,933,319 - 56,933,431	RGD
Cytogenetic Map	6	q21	UniSTS

BF400076

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	54,994,939 - 54,995,174 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	57,870,846 - 57,871,080	NCBI	Rnor6.0
Rnor_5.0	6	67,465,896 - 67,466,130	UniSTS	Rnor5.0
RGSC_v3.4	6	57,070,530 - 57,070,764	UniSTS	RGSC3.4
Celera	6	54,108,428 - 54,108,662	UniSTS
RH 3.4 Map	6	394.5	UniSTS
Cytogenetic Map	6	q21	UniSTS

RH127545

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	55,396,852 - 55,397,058 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	58,277,028 - 58,277,233	NCBI	Rnor6.0
Rnor_5.0	6	67,868,518 - 67,868,723	UniSTS	Rnor5.0
RGSC_v3.4	6	57,479,468 - 57,479,673	UniSTS	RGSC3.4
Celera	6	54,502,332 - 54,502,537	UniSTS
RH 3.4 Map	6	394.8	UniSTS
Cytogenetic Map	6	q21	UniSTS

RH144556

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	55,394,730 - 55,394,897 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	58,274,906 - 58,275,072	NCBI	Rnor6.0
Rnor_5.0	6	67,866,396 - 67,866,562	UniSTS	Rnor5.0
RGSC_v3.4	6	57,477,346 - 57,477,512	UniSTS	RGSC3.4
Celera	6	54,500,210 - 54,500,376	UniSTS
RH 3.4 Map	6	386.5	UniSTS
Cytogenetic Map	6	q21	UniSTS

BF386108

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	55,014,897 - 55,015,060 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	57,891,687 - 57,891,849	NCBI	Rnor6.0
Rnor_5.0	6	67,487,047 - 67,487,209	UniSTS	Rnor5.0
RGSC_v3.4	6	57,090,486 - 57,090,648	UniSTS	RGSC3.4
Celera	6	54,128,840 - 54,129,002	UniSTS
RH 3.4 Map	6	394.5	UniSTS
Cytogenetic Map	6	q21	UniSTS

BF386309

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	54,932,902 - 54,933,055 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	57,808,787 - 57,808,939	NCBI	Rnor6.0
Rnor_5.0	6	67,403,967 - 67,404,119	UniSTS	Rnor5.0
RGSC_v3.4	6	57,006,994 - 57,007,146	UniSTS	RGSC3.4
Celera	6	54,046,210 - 54,046,362	UniSTS
RH 3.4 Map	6	395.0	UniSTS
Cytogenetic Map	6	q21	UniSTS

RH94439

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	55,395,182 - 55,395,382 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	58,275,358 - 58,275,557	NCBI	Rnor6.0
Rnor_5.0	6	67,866,848 - 67,867,047	UniSTS	Rnor5.0
RGSC_v3.4	6	57,477,798 - 57,477,997	UniSTS	RGSC3.4
Celera	6	54,500,662 - 54,500,861	UniSTS
RH 3.4 Map	6	394.3	UniSTS
Cytogenetic Map	6	q21	UniSTS

RH135215

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	54,868,283 - 54,868,464 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	57,744,550 - 57,744,730	NCBI	Rnor6.0
Rnor_5.0	6	67,340,072 - 67,340,252	UniSTS	Rnor5.0
RGSC_v3.4	6	56,942,343 - 56,942,523	UniSTS	RGSC3.4
Celera	6	53,981,653 - 53,981,833	UniSTS
RH 3.4 Map	6	385.4	UniSTS
Cytogenetic Map	6	q21	UniSTS

AU049028

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	55,012,819 - 55,013,036 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	57,889,315 - 57,889,531	NCBI	Rnor6.0
Rnor_5.0	6	67,484,675 - 67,484,891	UniSTS	Rnor5.0
RGSC_v3.4	6	57,088,409 - 57,088,625	UniSTS	RGSC3.4
Celera	6	54,126,763 - 54,126,979	UniSTS
Cytogenetic Map	6	q21	UniSTS

S0226

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	55,349,322 - 55,349,902 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	58,229,234 - 58,229,814	NCBI	Rnor6.0
Rnor_5.0	6	67,820,724 - 67,821,304	UniSTS	Rnor5.0
RGSC_v3.4	6	57,431,934 - 57,432,513	UniSTS	RGSC3.4
RGSC_v3.4	1	261,970,823 - 261,971,685	UniSTS	RGSC3.4
Celera	6	54,454,803 - 54,455,382	UniSTS
Celera	1	250,430,238 - 250,431,100	UniSTS
Cytogenetic Map	6	q21	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
15	12	65	156	64	63	32	37	32	6	265	135	11	134	75	89	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_019304	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764649	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594328	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594329	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594330	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594331	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594332	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262360	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262361	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262363	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262364	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262365	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262366	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	D16100	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000063874 ⟹ ENSRNOP00000058842

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	60,368,588 - 61,124,420 (+)	Ensembl
mRatBN7.2 Ensembl	6	54,641,614 - 55,397,043 (+)	Ensembl
Rnor_6.0 Ensembl	6	57,516,713 - 58,277,279 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000111621 ⟹ ENSRNOP00000082015

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	60,368,519 - 61,124,251 (+)	Ensembl
mRatBN7.2 Ensembl	6	54,641,614 - 55,397,043 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000134799 ⟹ ENSRNOP00000106123

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	60,368,519 - 61,121,637 (+)	Ensembl

RefSeq Acc Id:

NM_019304 ⟹ NP_062177

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	60,368,588 - 61,124,420 (+)	NCBI
mRatBN7.2	6	54,641,380 - 55,397,210 (+)	NCBI
Rnor_6.0	6	57,517,012 - 58,277,216 (+)	NCBI
Rnor_5.0	6	67,113,446 - 67,580,128 (+)	NCBI
Rnor_5.0	6	67,693,661 - 67,868,706 (+)	NCBI
RGSC_v3.4	6	56,715,327 - 57,479,656 (+)	RGD
Celera	6	53,755,433 - 54,502,520 (+)	RGD

Sequence:

show sequence

GGAAAGGATCCTGAGAGGCGGCTGGTCCCAGTTCCTCTCCGGAAAAGCTGTCGCTCTCGCTTCA
GAGATGCGCCTAGCCTTCGCCTGCATCACGCTGCATGCTTTAACAAATTATTGAAATTACAAAC
ATCAACAGCAGTTTCATTTGGACAGAGTCCATATTCTGGAAGTCCAGGCTATTTTATCATGAAA
CACACCTTGTAAAATCTTTGAAGCATTGAATTCTGACCAAGATCTGGATAAAGAAGCCCTCATC
TGCTGTGTAAGAATCTCATCACCTACGCCATGACAAACCAGGAAAAATGGGCCCATCTCAGCCC
CTCAGAATTTTCCCAACTTCAGAAATATGCTGAGTATTCTACAAAGAAATTAAAGGATGTTCTT
GAAGAATTCCATGGTAATGGTGTGCTTGCAAAGTATAATCCTGAAGGGAAACAAGATATTCTTA
ACCAAACCATAGATTTTGAAGGATTCAAGCTGTTCATGAAGACCTTCCTGGAAGCTGAGCTCCC
TGACGATTTCACTGCCCACCTTTTCATGTCATTCAGCAACAAATTCCCCCATTCCAGCCCCAAC
GTAAAGAGCAAGCCAGCTCTGCTTTCAGGTGGTTTGAGGATGAATAAGGGTGCCATCACCCCTC
CACGTTCTTCTCCAGCAAATACGTGCTTCCCGGAAGTGATCCACCTCAAGGATATTGTCTGTTA
CCTGTCTCTTCTGGAAAGAGGAAGACCTGAGGACAAGCTTGAGTTTATGTTTCGCCTGTATGAC
ACCGATGGGAATGGCTTCCTGGACAGCTCGGAATTAGAAAATATCATCGGTCAGATGATGCATG
TTGCCGAGTACCTGGAATGGGATGTTACTGAACTTAATCCGATCCTTCATGAAATGATGGAAGA
AATCGACTATGACCGTGACGGCACTGTGTCTCTGGAAGAGTGGATTCAAGGAGGAATGACGACT
ATCCCACTTCTAGTCTTGCTGGGCTTGGAAAACAATGTGAAGGATGACGGACAGCATGTGTGGC
GACTCAAGCACTTTAACAAGCCCGCCTACTGCAATCTCTGCCTGAACATGCTGATTGGCGTGGG
GAAGCAGGGCCTCTGCTGCTCCTTCTGCAAGTACACCGTCCATGAGCGCTGTGCCAGAGCCCCG
CCCTCCTGCATCAAGACCTATGTGAAGTCCAAGAAGAACACTGACGTCATGCACCATTATTGGG
TCGAAGGCAATTGCCCAACCAAGTGTGATAAGTGCCACAAGACAGTGAAATGTTACCAGGGCCT
GACGGGGCTGCACTGTGTTTGGTGTCAGACCACGCTGCACAATAAATGTGCTTCTCATCTGAAG
CCTGAATGTGACTGTGGACCCTTGAAGGACCATATTTTGCCACCCACCACAATCTGTCCAGTTG
TATTGACTATGCCCACTGCCGGAACTTCAGTTCCTGAGGAAAGACAGTCAACAGCTAAAAAGGA
AAAGGGCAGCTCCCAGCAGCCAAATAAAGTGACAGACAAGAACAAAATGCAAAGAGCTAACTCT
GTCACTATGGATGGACAAGGTTTGCAGATCACTCCTATTCCTGGCACACATCCTCTTCTAGTTT
TTGTCAACCCTAAAAGTGGTGGGAAGCAAGGAGAACGAATTTACAGAAAATTCCAGTATCTTCT
AAATCCTCGTCAGGTTTACAGTCTTTCTGGAAATGGACCAATGCCAGGGTTACATTTTTTTCGC
GATGTCCCTGACTTCAGAGTGTTAGCATGCGGTGGAGATGGGACTGTGGGCTGGATTTTGGACT
GCATAGAAAAGGCCAATGTAGTCAAGCACCCTCCAGTTGCTATCCTGCCTCTTGGGACGGGCAA
TGACCTAGCAAGATGCCTGCGGTGGGGTGGAGGTTATGAAGGTGAAAATCTTATGAAGATCCTA
AAAGACATTGAAAGCAGCACAGAAATCATGTTGGACAGGTGGAAGTTTGAAGTCACACCCAACG
ACAAAGACGAGAAAGGAGACCCTGTGCCTTACAGCATCATCAACAACTACTTTTCCATTGGCGT
GGATGCTTCCATTGCACACAGATTCCACATCATGAGAGAAAAGCACCCGGAGAAATTCAACAGC
CGAATGAAGAACAAATTTTGGTACTTTGAGTTTGGCACATCAGAAACCTTCTCAGCCACCTGCA
AGAAACTGCATGAATCTGTAGAAATAGAATGTGATGGAGTACAGATAGATTTGATAAACATCTC
TCTGCAAGGAATTGCAATTTTGAATATACCAAGCATGCATGGAGGATCTAATCTTTGGGGAGAA
TCTAAAAAGAAAAGAAGTCATCGACGGATAGAGAAAAAAGGCTCTGACAAAAGACCCACTCTCA
CAGATGCAAAAGAACTGAAGTTTGCAAGTCAAGATCTGAGTGACCAGCTACTGGAGGTTGTTGG
CTTGGAAGGAGCAATGGAAATGGGCCAAATATACACGGGGCTGAAAAGTGCTGGCCGGCGGCTG
GCTCAGTGCTCCTCTGTGGTTATCAGGACAAGCAAGTCACTGCCAATGCAGATTGATGGAGAGC
CATGGATGCAGACCCCATGCACAATAAAAATTACACACAAGAACCAGGCCCCAATGCTGATGGG
ACCTCCACCTAAAACTGGATTATTCTGCTCCCTCATCAAAAGAACAAGAAACCGAAGCAAGGAA
TGAACCTCCGTCAGGAGAAATTTGAATAGCATACTTGTACCACGGAACATTTTGACCCATTTCA
AGTCTCCTGCTCCTACAAAATCATGGAATTCACAGTTTTTGTTATTGAGCTGATGTAAAATTTG
GCTATTAGAAAATTTGTTGTCTCTGTTTTCATAGGCGTATTTGCATGGAAAAAAAGTAGAAATT
TATATGATGCGACACAGCGTATTTAAGTTGCATGCACTCACACAGGGTTTCTGTGTCTCCTCCT
CACATCTTCTGCCATTTTCATTTACTGACTGTGAGGAAAAACCTGCGAAAGATCAAAGAAGTAT
GATGGGAAAAGATTTCTTATATAATTGCTGTCATTGGCAAGCAGTAATAACTATGGCTAAAACA
ACCTCAAGTGCAAACTGTCATCCTTTGCCTATTAGAAAAATCACTGCATCCTTGATGTTGGACC
CATGACATAGGAAGACGCTAAATTCAAAAATTTTATTAAAAAGTTGCCCATGATACCATGCTCC
ATCTAAATACTCTTTTTTAAATCTCTTTACTCTTCCCAGTGGACATGAGAATATCAGGCATAAG
ATTTTTTTCTTGTGCTAAAACACTAGAAAGTGACTTTTATTTTGTTTAGCTTTGTTTTTAACTC
CAAAAACACGAGAGCAAATATGTTACTAGGAGGAATTGTAGTAACATAGCAAGCTTTATTCCTT
TCTGCATAAGAATCTAGACACAAATGCATAATCACAGTAGTAGCCAAATGGACGGTTTAAACTA
TGTGCCAAACGAATCTGTTTCCCACCAAAGATCAGGAATTAGAGTTCTTACGAGTTTGGGAAAA
GTAAAATGTGAGACAAGAATGAGTTACCCATTCATTGTGATAAAAATGTTCACCATTCAAAACC
AGCAAATCATACAGTATAATCAAATCTCAATTGCCAATTTCATGGCTATTTGGTGCCCCCACCA
TATATGTCTGTGATTTTTAATGGATCTGTTAAGTGCACTTCAGAAGGTAAATGACAGCATTGGT
TCCTTTTCGGGTAGATTGGTACCTGCGACAATACTGAGCTCATTGAAGCAACCATGCATGCAAT
TAGCCTCTTACTAGTTATTCATCCCTGCCCCATCTTTATGACATTTCAAATGTTTGGGGATATA
TAAAGGCCTCCTTAAGGTGTGTGCATAGCATGATCTGGTCTCTGATTATTTAAAGAAATGTGCA
AGCTGCTGCTTTCATAGTGTTTCTTTGAGGCTATCCTAGGAAACGAAATACTTCGGGGCAGTCT
CAGTGTGGTTCAGTTACACTGACCTGCATCTCATCACCGCACGATTTATGTTTTCAGACGCAAC
GCCATCAGGAGAACGAGTGCTCGAAATGCATGATTTATCAGCTTTCCTCTCTGCTCTACATTAA
AGTGCTAATGATTTATCAGTTCTATTTTTCTATTGATTCTTTCATCTTTGAATAACAAATAGCA
GTTAGTGATTCTGTTGAACACAACCCCGTGCATGGATTTATTGATTTCCAGTGAAATTGCTGTA
ATTTTACTTCTTTCGTTGGAAAACTCAAGTGAATGCTGTTGTGTCAAATAGCTGCTCTCAAGCA
GTGTTCTGTAATGGAAGATTATGTGTAAAGTGTATTCCTCTCGTCGTCCTGGAACATCGGATGC
TAAATACCCATCAACAATAACTTTAATTGCTTTAAAAATAAAAGCTTTTGAATAGAATTAAGAC
ATAATTTAGCTTACCCAGGGAAATGATGATTAAAATTGCAAATTCAGTACAGCAATCAGTTGTC
CTAGTATAGTAATAATAAAGTAGTTATTCATCAGAATAGTAATCTAGACCAAAAGAATGCTCGA
AACAACTACAAACGCATCACTCACATAATGTTACATAACACATCCTTTGCTTTTGTGCATCTCT
GGTTACAGGTAATAAATATTTCTTACACGAATTGATGAGATTTTTCTACAGTGGGCAGGTAGAC
CTTGAGCCAAAATGTTATTTTGAATCCACAATAATTTCACGTTCTGGAGGACATTAAAGCAGCA
GTAGTTTCTGAATTATTTGCAGCATCTGGGAAACTGTAGTAGAAGACTAAAGAACTGGCCTGAA
TGGTTTCAGTCACTGAATAGTGGGCCCCTGCTGCACTTTAGCATGGCTGCATGACCACAACCAG
TTCTAGTAGGCACTACATTTCAGTCCATTGGATTCATGGATAACCCTAGTAAGTCTTCAAAAGG
GAATCAATTTTGACTTTCCTAAATTCGATTTTTTTTAAAAAGATAACTGATGTGCTTGCCCTTT
GAGTACACTACTCCTGGGGTTTGGAAAGTAGTTTTTTAAAATCTACTTTGATGGTTTTGAAATA
AGAGAAGATATTCTCTTCTTTTTTATGACAGCTTCGTGTGAAGAATATATATTTTAAGGAAAAT
TCTAAATGGAAAGTTCTATGGCATATTAAAATACTGAATAATGATTGTTAGCTTAACAAAATGG
AAACTTTACTTCCAGGCATGTGGGTGTCGGAGGTGTTGAGTCAACCTTTTTTAACTATCATAGA
CATAATAAGTGATAAAGTTCTGAGTGAAGTGGTGTGAAAATGAATGCTGCACTAGCTTAAAATG
GTCAGAGAATCTCAAGGATAGAGTTTCATACCCTGCTAAACACTGCCATATACTCAGTTCATAG
ACAGAAATGACAGATTCTAGAATAAACCTGGAAATGTACACTTTCAGGAAATAGGAAGGGCGAT
ATCGACGTGCAGTCAGCATTTCAAACGTCACGTGTGTATTTTCTCACTCTCCGTCATGTGTATT
TGATGTGGAGAGTGGCGATCGAGTTTTTGTAATAGAAGAAAAGATGCTTTACTTTACTTTGAAT
GGGTTATGTGGTTGCTGCCTTTCTAGAGCTCTCTGATCACGGGTTCATTGTACGCAGTCTCCTC
AAGGCAAGAATGTCTAATGGTAAGCGCGGTGGAGTCACACATCCATTCCCCTTTGGTACACGTG
ACTTGTATTAGAGAGTGGGGCTAAGTACCTTTACCTGGACCGAATCTGTTTAAGTCTGAGACTG
TCGATGCCACTTACACTAGCTAGGGCTCTTCGGTGGTTCCTTTCCTTTTTCTGTTAGTGTTCGC
TGGTTTTTGATTGGTTTTGAAAGGAACGGTGTATTTTTATGGTACATATAACCCTCGAAGAGTT
AATCGATGGATAACTTATATTCCACATTAAAGGATATACCTTTCTAGCACTTATAGCATATATT
GAGACTGTGGGATGTAATAAAAATAATAAATGAATTTAAGAAAAGCCTTTTGTTCTGTGAAAGA
CAGAAATCACATCCTTAAACCAGCCAATTGAATTGAATTATGTTTAAAGGTTTGAGTAAATTCT
CATTTGAACCTTTCTATATATTCTTATTGTGTTTAAAACATAGGGTTTGTTTAATTAAACTATC
TTACTTATTTTCTCAGAAAGTGTTATGTACAAATCCTGGTTTTTGAAATAAAAGTGTTAACCAT
TAA

hide sequence

RefSeq Acc Id:

XM_008764649 ⟹ XP_008762871

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	60,368,393 - 61,124,253 (+)	NCBI
mRatBN7.2	6	54,641,591 - 55,393,530 (+)	NCBI
Rnor_6.0	6	57,517,038 - 58,277,385 (+)	NCBI

Sequence:

show sequence

CCCAGTTCCTCTCCGGAAAAGCTGTCGCTCTCGCTTCAGAGATGCGCCTAGCCTTCGCCTGCAT
CACGCTGCATGCTTTAACAAATTATTGAAATTACAAACATCAACAGCAGTTTCATTTCGACAGA
GTCCATATTCTGGAAGTCCAGGCTATTTTATCATGAAACACACCTTGTAAAATCTTTGAAGCAT
TGAATTCTGACCAAGATCTGGATAAAGAAGCCCTCATCTGCTGTGTAAGAATCTCATCACCTAC
GCCATGACAAACCAGGAAAAATGGGCCCATCTCAGCCCCTCAGAATTTTCCCAACTTCAGAAAT
ATGCTGAGTATTCTACAAAGAAATTAAAGGATGTTCTTGAAGAATTCCATGGTAATGGTGTGCT
TGCAAAGTATAATCCTGAAGGGAAACAAGATATTCTTAACCAAACCATAGATTTTGAAGGATTC
AAGCTGTTCATGAAGACCTTCCTGGAAGCTGAGCTCCCTGACGATTTCACTGCCCACCTTTTCA
TGTCATTCAGCAACAAATTCCCCCATTCCAGCCCCAACGTAAAGAGCAAGCCAGCTCTGCTTTC
AGGTGGTTTGAGGATGAATAAGGGTGCCATCACCCCTCCACGTTCTTCTCCAGCAAATACGTGC
TCCCCGGAAGTGATCCACCTCAAGGATATTGTCTGTTACCTGTCTCTTCTGGAAAGAGGAAGAC
CTGAGGACAAGCTTGAGTTTATGTTTCGCCTGTATGACACCGATGGGAATGGCTTCCTGGACAG
CTCGGAATTAGAAAATATCATCGGTCAGATGATGCATGTTGCCGAGTACCTGGAATGGGATGTT
ACTGAACTTAATCCGATCCTTCATGAAATGATGGAAGAAATCGACTATGACCGTGACGGCACTG
TGTCTCTGGAAGAGTGGATTCAAGGAGGAATGACGACTATCCCACTTCTAGTCTTGCTGGGCTT
GGAAAACAATGTGAAGGATGACGGACAGCATGTGTGGCGACTCAAGCACTTTAACAAGCCCGCC
TACTGCAATCTCTGCCTGAACATGCTGATTGGCGTGGGGAAGCAGGGCCTCTGCTGCTCCTTCT
GCAAGTACACCGTCCATGAGCGCTGCGTGGCCAGAGCCCCGCCCTCCTGCATCAAGACCTATGT
GAAGTCCAAGAAGAACACTGACGTCATGCACCATTATTGGGTCGAAGGCAATTGCCCAACCAAG
TGTGATAAGTGCCACAAGACAGTGAAATGTTACCAGGGCCTGACGGGGCTGCACTGTGTTTGGT
GTCAGACCACGCTGCACAATAAATGTGCTTCTCATCTGAAGCCTGAATGTGACTGTGGACCCTT
GAAGGACCATATTTTGCCACCCACCACAATCTGTCCAGTTGTATTGCAGACTATGCCCACTGCC
GGAACTTCAGTTCCTGAGGAAAGACAGTCAACAGCTAAAAAGGAAAAGGGCAGCTCCCAGCAGC
CAAATAAAGTGACAGACAAGAACAAAATGCAAAGAGCTAACTCTGTCACTATGGATGGACAAGG
TTTGCAGATCACTCCTATTCCTGGCACACATCCTCTTCTAGTTTTTGTCAACCCTAAAAGTGGT
GGGAAGCAAGGAGAACGAATTTACAGAAAATTCCAGTATCTTCTAAATCCTCGTCAGGTTTACA
GTCTTTCTGGAAATGGACCAATGCCAGGGTTACATTTTTTTCGCGATGTCCCTGACTTCAGAGT
GTTAGCATGCGGTGGAGATGGGACTGTGGGCTGGATTTTGGACTGCATAGAAAAGGCCAATGTA
GTCAAGCACCCTCCAGTTGCTATCCTGCCTCTTGGGACGGGCAATGACCTAGCAAGATGCCTGC
GGTGGGGTGGAGGTTATGAAGGTGAAAATCTTATGAAGATCCTAAAAGACATTGAAAGCAGCAC
AGAAATCATGTTGGACAGGTGGAAGTTTGAAGTCACACCCAACGACAAAGACGAGAAAGGAGAC
CCTGTGCCTTACAGCATCATCAACAACTACTTTTCCATTGGCGTGGATGCTTCCATTGCACACA
GATTCCACATCATGAGAGAAAAGCACCCGGAGAAATTCAACAGCCGAATGAAGAACAAATTTTG
GTACTTTGAGTTTGGCACATCAGAAACCTTCTCAGCCACCTGCAAGAAACTGCATGAATCTGTA
GAAATAGAATGTGATGGAGTACAGATAGATTTGATAAACATCTCTCTGGAAGGAATTGCAATTT
TGAATATACCAAGCATGCATGGAGGATCTAATCTTTGGGGAGAATCTAAAAAGAAAAGAAGTCA
TCGACGGATAGAGAAAAAAGGCTCTGACAAAAGACCCACTCTCACAGATGCAAAAGAACTGAAG
TTTGCAAGTCAAGATCTGAGTGACCAGCTACTGGAGGTTGTTGGCTTGGAAGGAGCAATGGAAA
TGGGCCAAATATACACGGGGCTGAAAAGTGCTGGCCGGCGGCTGGCTCAGTGCTCCTCTGTGGT
TATCAGGACAAGCAAGTCACTGCCAATGCAGATTGATGGAGAGCCATGGATGCAGACCCCATGC
ACAATAAAAATTACACACAAGAACCAGGCCCCAATGCTGATGGGACCTCCACCTAAAACTGGAT
TATTCTGCTCCCTCATCAAAAGAACAAGAAACCGAAGCAAGGAATGAACCTCCGTCAGGAGAAA
TTTGAATAGCATACTTGTACCACGGAACATTTTGACCCATTTCAAGTCTCCTGCTCCTACAAAA
TCATGGAATTCACAGTTTTTGTTATTGAGCTGATGTAAAATTTGGCTATTAGAAAATTTGTTGT
CTCTGTTTTCATAGGCGTATTTGCATGGAAAAAAAGTAGAAATTTATATGATGCGACACAGCGT
ATTTAAGTTGCATGCACTCACACAGGGTTTCTGTGTCTCCTCCTCACATCTTCTGCCATTTTCA
TTTACTGACTGTGAGGAAAAACCTGCGAAAGATCAAAGAAGTATGATGGGAAAAGATTTCTTAT
ATAATTGCTGTCATTGGCAAGCAGTAATAACTATGGCTAAAACAACCTCAAGTGCAAACTGTCA
TCCTTTGCCTATTAGAAAAATCACTGCATCCTTGATGTTGGACCCATGACATAGGAAGACGCTA
AATTCAAAAATTTTATTAAAAAGTTGCCCATGATACCATGCTCCATCTAAATACTCTTTTTTAA
ATCTCTTTACTCTTCCCAGTGGACATGAGAATATCAGGCATAAGATTTTTTCTTGTGCTAAAAC
ACTAGAAAGTGACTTTTATTTTGTTTAGCTTTGTTTTTAACTCCAAAAACACGAGAGCAAATAT
GTTACTAGGAGGAATTGTAGTAACATAGCAAGCTTTATTCCTTTCTGCATAAGAATCTAGACAC
AAATGCATAATCACAGTAGTAGCCAAATGGACGGTTTAAACTATGTGCCAAACGAATCTGTTTC
CCACCAAAGATCAGGAATTAGAGTTCTTACGAGTTTGGGAAAAGTAAAATGTGAGACAAGAATG
AGTTACCCATTCATTGTGATAAAAATGTTCACCATTCAAAACCAGCGAATCATACAGTATAATC
AAATCTCAATTGCCAATTTCATGGCTATTTGGTGCCCCCACCATATATGTCTGTGATTTTTAAT
GGATCTGTTAAGTGCACTTCAGAAGGTAAATGACAGCGTTGGTTCCTTTTTGGGTAGATTGGTA
CCTGCGACAATACTGAGCTCATTGAAGCAACCATGCATGCAATTAGCCTCTTACTAGTTATTCA
TCCCTGCCCCATCTTTATGACATTTCAAATGTTTGGGGATATATAAAGGCCTCCTTAAGGTGTG
TGCATAGCATGATCTGGTCTCTGATTATTTAAAGAAATGTGCAAGTGCTGCTTTTCATAGTGTT
TCTTTGAGGCTATCCTAGGAAACGAAATACTTCGGGGCAGTCTCAGTGTGGTTCAGTTACACTG
ACCTGCATCTCATCACCGCACGATTTATGTTTTCAGACGCAACGCCATCAGGAGAATGAGTGCT
CGAAATGCATGATTTATCAGCTTTCCTCTCTGCTCTACATTAAAGTGCTAATGATTTATCAGTT
CTATTTTTCTATTGATTCTTTCATCTTTGAATAACAAATAGCAGTTAGTGATTCTGTTGAACAC
AACCCCGTGCATGGATTTATTGATTTCCAGTGAAATTGCTGTAATTTTACTTCTTTCGTTGGAA
AACTCAAGTGAATGCTGTTGTGTCAAATAGCTGCTCTCAAGCAGTGTTCTGTAATGGAAGATTA
TGTATAAAGTGTATTCCTCTCGTCGTCCTGGAACATTGGATGCTAAATACCCATCAACAATAAC
TTTAATTGCTTTAAAAATAAAAGCTTTTGAATAGAATTAAGACATAATTTAGCTTACCCAGGGA
AATGATGATTAAAATTGCAAATTCAGTACAGCAATCAGTTGTCCTAGTATAGTAATAATAAAGT
AGTTATTCATCAGAATAGTAATCTAGACCAAAAGAATGCTCGAAACAACTACAAACGCATCACT
CACATAATGTTACATAACACATCCTTTGCTTTTGTGCATCTCTGGTTACAGGTAATAAATATTT
CTTACACGAATTGATGAGATTTTTCTACAGTGGGCAGGTAGACCTTGAGCCAAAATGTTATTTT
GAATCCACAATAATTTCACGTTCTGGAGGACATTAAAGCAGCAGTAGTTTCTGAATTATTTGCA
GCATCTGGGAAACTGTAGTAGAAGACTAAAGAACTGGCCTGAATGGTTTCAGTCACTGAATAGT
GGGCCCCTGCTGCACTTTAGCATGGCTGCATGACCACAACCAGTTCTAGTAGGCACTACATTTC
AGTCCATTGGATTCATGGATAACCCTAGTAAGTCTTCAAAAGGGAATCAATTTTGACTTTCCTA
AATTCGATTTTTTTTAAAAAGATAACTGATGTGCTTGCCCTTTGAGTACACTACTCCTGGGGTT
TGGAAAGTAGTTTTTTAAAATCTACTTTGATGGTTTTGAAATAAGAGAAGATATTCTCTTCTTT
TTTATGACAGCTTCGTGTGAAGAATATATATTTTAAGGAAAATTCTAAATGGAAAGTTCTATGG
CATATTAAAATACTGAATAATGATTGTTAGCTTAACAAAATGGAAACTTTACTTCCAGGCATGT
GGGTGTCGGAGGTGTTGAGTCAACCTTTTTTAACTATCATAGACATAATAAGTGATAAAGTTCT
GAGTGAAGTGGTGTGAAAATGAATGCTGCACTAGCTTAAAATGGTCAGAGAATCTCAAGGATAG
AGTTTCATACCCTGCTAAACACTGCCATATACTCAGTTCATAGACAGAAATGACAGATTCTAGA
ATAAACCTGGAAATGTACACTTTCAGGAAATAGGAAGGGCGATATCGACGTGCAGTCAGCATTT
CAAACGTCACGTGTGTATTTTCTCACTCTCCGTCATGTGTATTTGATGTGGAGAGTGGCGATCG
AGTTTTTGTAATAGAAGAAAAGATGCTTTACTTTGAATGGGTTATGTGGTTGCTGCCTTTCTAG
AGCTCTCTGATCACGGGTTCATTGTACGCAGTCTCCTCAAGGCAAGAATGTCTAATGGTAAGCG
CGGTGGAGTCACACATCCATTCCCCTTTGTACACGTGACTTGTATTAGAGAGTGGGGCTAAGTA
CCTTTACCTGGACCGAATCTGTTTAAGTCTGAGACTGTCGATGCCACTTACACTAGCTAGGGCT
CTTCGGTGGTTCCTTTCCTTTTTCTGTTAGTGTTCGCTGGTTTTTGATTGGTTTTGAAAGGAAC
GGTGTATTTTTATGGTACATATAACCCTCGAAGAGTTAATCGATGGATAACTTATATTCCACAT
TAAAGGATATACCTTTCTAGCACTTATAGCATATATTGAGACTGTGGGATGTAATAAAAATAAT
AAATGAATTTAAGAAAAGCCTTTTGTTCTGTGAAAGACAGAAATCACATCCTTAAACCAGCCAA
TTGAATTGAATTATGTTTAAAGGTTTGAGTAAATTCTCATTTGAACCTTTCTATATATTCTTAT
TGTGTTTAAAACATAGGGTTTGTTTAATTAAACTATCTTACTTATTTTCTCAGAAAGTGTTATG
TACAAATCCTGGTTTTTGAAATAAAAGTGTTAACCATTCACTTGTGCATCATTTGTTCTCTTCC
AGATGGTCCCTTCATGTGAAATATCCATTAGAACATCCTCAGTGGTTTTCCACTAGAGGACCTG
TGCAAGCCGCCTTGTCTTAGGAATAAAAACACTGTGCTTAGGGGTTAAATTACTTGTCATTAAA
AACCAAGCCATTCAA

hide sequence

RefSeq Acc Id:

XM_017594328 ⟹ XP_017449817

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	60,368,138 - 61,124,253 (+)	NCBI
mRatBN7.2	6	54,640,948 - 55,393,530 (+)	NCBI
Rnor_6.0	6	57,516,351 - 58,277,385 (+)	NCBI

Sequence:

show sequence

CAAGGGCTATAGTAGCAAAAGCAGCCTCAGCAGCCAGGCAGGGCTGTAGCTTGCAGCCAAGCAG
ACCGCCGCCGCCTCATCACCACACACAGACACACACACACACACACACACACACACACACACAC
ACACACACACATTGCACACACATCCCGAATCAACGCGTTCTCACACAAATTCTGGACCACGACA
GATGAGAGAAGAGCAATAGGCACGGACAACAGTGCTTTAACAAATTATTGAAATTACAAACATC
AACAGCAGTTTCATTTCGACAGAGTCCATATTCTGGAAGTCCAGGCTATTTTATCATGAAACAC
ACCTTGTAAAATCTTTGAAGCATTGAATTCTGACCAAGATCTGGATAAAGAAGCCCTCATCTGC
TGTGTAAGAATCTCATCACCTACGCCATGACAAACCAGGAAAAATGGGCCCATCTCAGCCCCTC
AGAATTTTCCCAACTTCAGAAATATGCTGAGTATTCTACAAAGAAATTAAAGGATGTTCTTGAA
GAATTCCATGGTAATGGTGTGCTTGCAAAGTATAATCCTGAAGGGAAACAAGATATTCTTAACC
AAACCATAGATTTTGAAGGATTCAAGCTGTTCATGAAGACCTTCCTGGAAGCTGAGCTCCCTGA
CGATTTCACTGCCCACCTTTTCATGTCATTCAGCAACAAATTCCCCCATTCCAGCCCCAACGTA
AAGAGCAAGCCAGCTCTGCTTTCAGGTGGTTTGAGGATGAATAAGGGTGCCATCACCCCTCCAC
GTTCTTCTCCAGCAAATACGTGCTCCCCGGAAGTGATCCACCTCAAGGATATTGTCTGTTACCT
GTCTCTTCTGGAAAGAGGAAGACCTGAGGACAAGCTTGAGTTTATGTTTCGCCTGTATGACACC
GATGGGAATGGCTTCCTGGACAGCTCGGAATTAGAAAATATCATCGGTCAGATGATGCATGTTG
CCGAGTACCTGGAATGGGATGTTACTGAACTTAATCCGATCCTTCATGAAATGATGGAAGAAAT
CGACTATGACCGTGACGGCACTGTGTCTCTGGAAGAGTGGATTCAAGGAGGAATGACGACTATC
CCACTTCTAGTCTTGCTGGGCTTGGAAAACAATGTGAAGGATGACGGACAGCATGTGTGGCGAC
TCAAGCACTTTAACAAGCCCGCCTACTGCAATCTCTGCCTGAACATGCTGATTGGCGTGGGGAA
GCAGGGCCTCTGCTGCTCCTTCTGCAAGTACACCGTCCATGAGCGCTGCGTGGCCAGAGCCCCG
CCCTCCTGCATCAAGACCTATGTGAAGTCCAAGAAGAACACTGACGTCATGCACCATTATTGGG
TCGAAGGCAATTGCCCAACCAAGTGTGATAAGTGCCACAAGACAGTGAAATGTTACCAGGGCCT
GACGGGGCTGCACTGTGTTTGGTGTCAGACCACGCTGCACAATAAATGTGCTTCTCATCTGAAG
CCTGAATGTGACTGTGGACCCTTGAAGGACCATATTTTGCCACCCACCACAATCTGTCCAGTTG
TATTGCAGACTATGCCCACTGCCGGAACTTCAGTTCCTGAGGAAAGACAGTCAACAGCTAAAAA
GGAAAAGGGCAGCTCCCAGCAGCCAAATAAAGTGACAGACAAGAACAAAATGCAAAGAGCTAAC
TCTGTCACTATGGATGGACAAGGTTTGCAGATCACTCCTATTCCTGGCACACATCCTCTTCTAG
TTTTTGTCAACCCTAAAAGTGGTGGGAAGCAAGGAGAACGAATTTACAGAAAATTCCAGTATCT
TCTAAATCCTCGTCAGGTTTACAGTCTTTCTGGAAATGGACCAATGCCAGGGTTACATTTTTTT
CGCGATGTCCCTGACTTCAGAGTGTTAGCATGCGGTGGAGATGGGACTGTGGGCTGGATTTTGG
ACTGCATAGAAAAGGCCAATGTAGTCAAGCACCCTCCAGTTGCTATCCTGCCTCTTGGGACGGG
CAATGACCTAGCAAGATGCCTGCGGTGGGGTGGAGGTTATGAAGGTGAAAATCTTATGAAGATC
CTAAAAGACATTGAAAGCAGCACAGAAATCATGTTGGACAGGTGGAAGTTTGAAGTCACACCCA
ACGACAAAGACGAGAAAGGAGACCCTGTGCCTTACAGCATCATCAACAACTACTTTTCCATTGG
CGTGGATGCTTCCATTGCACACAGATTCCACATCATGAGAGAAAAGCACCCGGAGAAATTCAAC
AGCCGAATGAAGAACAAATTTTGGTACTTTGAGTTTGGCACATCAGAAACCTTCTCAGCCACCT
GCAAGAAACTGCATGAATCTGTAGAAATAGAATGTGATGGAGTACAGATAGATTTGATAAACAT
CTCTCTGGAAGGAATTGCAATTTTGAATATACCAAGCATGCATGGAGGATCTAATCTTTGGGGA
GAATCTAAAAAGAAAAGAAGTCATCGACGGATAGAGAAAAAAGGCTCTGACAAAAGACCCACTC
TCACAGATGCAAAAGAACTGAAGTTTGCAAGTCAAGATCTGAGTGACCAGCTACTGGAGGTTGT
TGGCTTGGAAGGAGCAATGGAAATGGGCCAAATATACACGGGGCTGAAAAGTGCTGGCCGGCGG
CTGGCTCAGTGCTCCTCTGTGGTTATCAGGACAAGCAAGTCACTGCCAATGCAGATTGATGGAG
AGCCATGGATGCAGACCCCATGCACAATAAAAATTACACACAAGAACCAGGCCCCAATGCTGAT
GGGACCTCCACCTAAAACTGGATTATTCTGCTCCCTCATCAAAAGAACAAGAAACCGAAGCAAG
GAATGAACCTCCGTCAGGAGAAATTTGAATAGCATACTTGTACCACGGAACATTTTGACCCATT
TCAAGTCTCCTGCTCCTACAAAATCATGGAATTCACAGTTTTTGTTATTGAGCTGATGTAAAAT
TTGGCTATTAGAAAATTTGTTGTCTCTGTTTTCATAGGCGTATTTGCATGGAAAAAAAGTAGAA
ATTTATATGATGCGACACAGCGTATTTAAGTTGCATGCACTCACACAGGGTTTCTGTGTCTCCT
CCTCACATCTTCTGCCATTTTCATTTACTGACTGTGAGGAAAAACCTGCGAAAGATCAAAGAAG
TATGATGGGAAAAGATTTCTTATATAATTGCTGTCATTGGCAAGCAGTAATAACTATGGCTAAA
ACAACCTCAAGTGCAAACTGTCATCCTTTGCCTATTAGAAAAATCACTGCATCCTTGATGTTGG
ACCCATGACATAGGAAGACGCTAAATTCAAAAATTTTATTAAAAAGTTGCCCATGATACCATGC
TCCATCTAAATACTCTTTTTTAAATCTCTTTACTCTTCCCAGTGGACATGAGAATATCAGGCAT
AAGATTTTTTCTTGTGCTAAAACACTAGAAAGTGACTTTTATTTTGTTTAGCTTTGTTTTTAAC
TCCAAAAACACGAGAGCAAATATGTTACTAGGAGGAATTGTAGTAACATAGCAAGCTTTATTCC
TTTCTGCATAAGAATCTAGACACAAATGCATAATCACAGTAGTAGCCAAATGGACGGTTTAAAC
TATGTGCCAAACGAATCTGTTTCCCACCAAAGATCAGGAATTAGAGTTCTTACGAGTTTGGGAA
AAGTAAAATGTGAGACAAGAATGAGTTACCCATTCATTGTGATAAAAATGTTCACCATTCAAAA
CCAGCGAATCATACAGTATAATCAAATCTCAATTGCCAATTTCATGGCTATTTGGTGCCCCCAC
CATATATGTCTGTGATTTTTAATGGATCTGTTAAGTGCACTTCAGAAGGTAAATGACAGCGTTG
GTTCCTTTTTGGGTAGATTGGTACCTGCGACAATACTGAGCTCATTGAAGCAACCATGCATGCA
ATTAGCCTCTTACTAGTTATTCATCCCTGCCCCATCTTTATGACATTTCAAATGTTTGGGGATA
TATAAAGGCCTCCTTAAGGTGTGTGCATAGCATGATCTGGTCTCTGATTATTTAAAGAAATGTG
CAAGTGCTGCTTTTCATAGTGTTTCTTTGAGGCTATCCTAGGAAACGAAATACTTCGGGGCAGT
CTCAGTGTGGTTCAGTTACACTGACCTGCATCTCATCACCGCACGATTTATGTTTTCAGACGCA
ACGCCATCAGGAGAATGAGTGCTCGAAATGCATGATTTATCAGCTTTCCTCTCTGCTCTACATT
AAAGTGCTAATGATTTATCAGTTCTATTTTTCTATTGATTCTTTCATCTTTGAATAACAAATAG
CAGTTAGTGATTCTGTTGAACACAACCCCGTGCATGGATTTATTGATTTCCAGTGAAATTGCTG
TAATTTTACTTCTTTCGTTGGAAAACTCAAGTGAATGCTGTTGTGTCAAATAGCTGCTCTCAAG
CAGTGTTCTGTAATGGAAGATTATGTATAAAGTGTATTCCTCTCGTCGTCCTGGAACATTGGAT
GCTAAATACCCATCAACAATAACTTTAATTGCTTTAAAAATAAAAGCTTTTGAATAGAATTAAG
ACATAATTTAGCTTACCCAGGGAAATGATGATTAAAATTGCAAATTCAGTACAGCAATCAGTTG
TCCTAGTATAGTAATAATAAAGTAGTTATTCATCAGAATAGTAATCTAGACCAAAAGAATGCTC
GAAACAACTACAAACGCATCACTCACATAATGTTACATAACACATCCTTTGCTTTTGTGCATCT
CTGGTTACAGGTAATAAATATTTCTTACACGAATTGATGAGATTTTTCTACAGTGGGCAGGTAG
ACCTTGAGCCAAAATGTTATTTTGAATCCACAATAATTTCACGTTCTGGAGGACATTAAAGCAG
CAGTAGTTTCTGAATTATTTGCAGCATCTGGGAAACTGTAGTAGAAGACTAAAGAACTGGCCTG
AATGGTTTCAGTCACTGAATAGTGGGCCCCTGCTGCACTTTAGCATGGCTGCATGACCACAACC
AGTTCTAGTAGGCACTACATTTCAGTCCATTGGATTCATGGATAACCCTAGTAAGTCTTCAAAA
GGGAATCAATTTTGACTTTCCTAAATTCGATTTTTTTTAAAAAGATAACTGATGTGCTTGCCCT
TTGAGTACACTACTCCTGGGGTTTGGAAAGTAGTTTTTTAAAATCTACTTTGATGGTTTTGAAA
TAAGAGAAGATATTCTCTTCTTTTTTATGACAGCTTCGTGTGAAGAATATATATTTTAAGGAAA
ATTCTAAATGGAAAGTTCTATGGCATATTAAAATACTGAATAATGATTGTTAGCTTAACAAAAT
GGAAACTTTACTTCCAGGCATGTGGGTGTCGGAGGTGTTGAGTCAACCTTTTTTAACTATCATA
GACATAATAAGTGATAAAGTTCTGAGTGAAGTGGTGTGAAAATGAATGCTGCACTAGCTTAAAA
TGGTCAGAGAATCTCAAGGATAGAGTTTCATACCCTGCTAAACACTGCCATATACTCAGTTCAT
AGACAGAAATGACAGATTCTAGAATAAACCTGGAAATGTACACTTTCAGGAAATAGGAAGGGCG
ATATCGACGTGCAGTCAGCATTTCAAACGTCACGTGTGTATTTTCTCACTCTCCGTCATGTGTA
TTTGATGTGGAGAGTGGCGATCGAGTTTTTGTAATAGAAGAAAAGATGCTTTACTTTGAATGGG
TTATGTGGTTGCTGCCTTTCTAGAGCTCTCTGATCACGGGTTCATTGTACGCAGTCTCCTCAAG
GCAAGAATGTCTAATGGTAAGCGCGGTGGAGTCACACATCCATTCCCCTTTGTACACGTGACTT
GTATTAGAGAGTGGGGCTAAGTACCTTTACCTGGACCGAATCTGTTTAAGTCTGAGACTGTCGA
TGCCACTTACACTAGCTAGGGCTCTTCGGTGGTTCCTTTCCTTTTTCTGTTAGTGTTCGCTGGT
TTTTGATTGGTTTTGAAAGGAACGGTGTATTTTTATGGTACATATAACCCTCGAAGAGTTAATC
GATGGATAACTTATATTCCACATTAAAGGATATACCTTTCTAGCACTTATAGCATATATTGAGA
CTGTGGGATGTAATAAAAATAATAAATGAATTTAAGAAAAGCCTTTTGTTCTGTGAAAGACAGA
AATCACATCCTTAAACCAGCCAATTGAATTGAATTATGTTTAAAGGTTTGAGTAAATTCTCATT
TGAACCTTTCTATATATTCTTATTGTGTTTAAAACATAGGGTTTGTTTAATTAAACTATCTTAC
TTATTTTCTCAGAAAGTGTTATGTACAAATCCTGGTTTTTGAAATAAAAGTGTTAACCATTCAC
TTGTGCATCATTTGTTCTCTTCCAGATGGTCCCTTCATGTGAAATATCCATTAGAACATCCTCA
GTGGTTTTCCACTAGAGGACCTGTGCAAGCCGCCTTGTCTTAGGAATAAAAACACTGTGCTTAG
GGGTTAAATTACTTGTCATTAAAAACCAAGCCATTCAA

hide sequence

RefSeq Acc Id:

XM_017594329 ⟹ XP_017449818

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	60,368,383 - 61,124,253 (+)	NCBI
mRatBN7.2	6	54,641,591 - 55,393,530 (+)	NCBI
Rnor_6.0	6	57,517,038 - 58,277,385 (+)	NCBI

Sequence:

show sequence

CCCAGTTCCTCTCCGGAAAAGCTGTCGCTCTCGCTTCAGAGATGCGCCTAGCCTTCGCCTGCAT
CACGCTGCATGCTTTAACAAATTATTGAAATTACAAACATCAACAGCAGTTTCATTTCGACAGA
GTCCATATTCTGGAAGTCCAGGCTATTTTATCATGAAACACACCTTGTAAAATCTTTGAAGCAT
TGAATTCTGACCAAGATCTGGATAAAGAAGCCCTCATCTGCTGTGTAAGAATCTCATCACCTAC
GCCATGACAAACCAGGAAAAATGGGCCCATCTCAGCCCCTCAGAATTTTCCCAACTTCAGAAAT
ATGCTGAGTATTCTACAAAGAAATTAAAGGATGTTCTTGAAGAATTCCATGGTAATGGTGTGCT
TGCAAAGTATAATCCTGAAGGGACCATAGATTTTGAAGGATTCAAGCTGTTCATGAAGACCTTC
CTGGAAGCTGAGCTCCCTGACGATTTCACTGCCCACCTTTTCATGTCATTCAGCAACAAATTCC
CCCATTCCAGCCCCAACGTAAAGAGCAAGCCAGCTCTGCTTTCAGGTGGTTTGAGGATGAATAA
GGGTGCCATCACCCCTCCACGTTCTTCTCCAGCAAATACGTGCTCCCCGGAAGTGATCCACCTC
AAGGATATTGTCTGTTACCTGTCTCTTCTGGAAAGAGGAAGACCTGAGGACAAGCTTGAGTTTA
TGTTTCGCCTGTATGACACCGATGGGAATGGCTTCCTGGACAGCTCGGAATTAGAAAATATCAT
CGGTCAGATGATGCATGTTGCCGAGTACCTGGAATGGGATGTTACTGAACTTAATCCGATCCTT
CATGAAATGATGGAAGAAATCGACTATGACCGTGACGGCACTGTGTCTCTGGAAGAGTGGATTC
AAGGAGGAATGACGACTATCCCACTTCTAGTCTTGCTGGGCTTGGAAAACAATGTGAAGGATGA
CGGACAGCATGTGTGGCGACTCAAGCACTTTAACAAGCCCGCCTACTGCAATCTCTGCCTGAAC
ATGCTGATTGGCGTGGGGAAGCAGGGCCTCTGCTGCTCCTTCTGCAAGTACACCGTCCATGAGC
GCTGCGTGGCCAGAGCCCCGCCCTCCTGCATCAAGACCTATGTGAAGTCCAAGAAGAACACTGA
CGTCATGCACCATTATTGGGTCGAAGGCAATTGCCCAACCAAGTGTGATAAGTGCCACAAGACA
GTGAAATGTTACCAGGGCCTGACGGGGCTGCACTGTGTTTGGTGTCAGACCACGCTGCACAATA
AATGTGCTTCTCATCTGAAGCCTGAATGTGACTGTGGACCCTTGAAGGACCATATTTTGCCACC
CACCACAATCTGTCCAGTTGTATTGCAGACTATGCCCACTGCCGGAACTTCAGTTCCTGAGGAA
AGACAGTCAACAGCTAAAAAGGAAAAGGGCAGCTCCCAGCAGCCAAATAAAGTGACAGACAAGA
ACAAAATGCAAAGAGCTAACTCTGTCACTATGGATGGACAAGGTTTGCAGATCACTCCTATTCC
TGGCACACATCCTCTTCTAGTTTTTGTCAACCCTAAAAGTGGTGGGAAGCAAGGAGAACGAATT
TACAGAAAATTCCAGTATCTTCTAAATCCTCGTCAGGTTTACAGTCTTTCTGGAAATGGACCAA
TGCCAGGGTTACATTTTTTTCGCGATGTCCCTGACTTCAGAGTGTTAGCATGCGGTGGAGATGG
GACTGTGGGCTGGATTTTGGACTGCATAGAAAAGGCCAATGTAGTCAAGCACCCTCCAGTTGCT
ATCCTGCCTCTTGGGACGGGCAATGACCTAGCAAGATGCCTGCGGTGGGGTGGAGGTTATGAAG
GTGAAAATCTTATGAAGATCCTAAAAGACATTGAAAGCAGCACAGAAATCATGTTGGACAGGTG
GAAGTTTGAAGTCACACCCAACGACAAAGACGAGAAAGGAGACCCTGTGCCTTACAGCATCATC
AACAACTACTTTTCCATTGGCGTGGATGCTTCCATTGCACACAGATTCCACATCATGAGAGAAA
AGCACCCGGAGAAATTCAACAGCCGAATGAAGAACAAATTTTGGTACTTTGAGTTTGGCACATC
AGAAACCTTCTCAGCCACCTGCAAGAAACTGCATGAATCTGTAGAAATAGAATGTGATGGAGTA
CAGATAGATTTGATAAACATCTCTCTGGAAGGAATTGCAATTTTGAATATACCAAGCATGCATG
GAGGATCTAATCTTTGGGGAGAATCTAAAAAGAAAAGAAGTCATCGACGGATAGAGAAAAAAGG
CTCTGACAAAAGACCCACTCTCACAGATGCAAAAGAACTGAAGTTTGCAAGTCAAGATCTGAGT
GACCAGCTACTGGAGGTTGTTGGCTTGGAAGGAGCAATGGAAATGGGCCAAATATACACGGGGC
TGAAAAGTGCTGGCCGGCGGCTGGCTCAGTGCTCCTCTGTGGTTATCAGGACAAGCAAGTCACT
GCCAATGCAGATTGATGGAGAGCCATGGATGCAGACCCCATGCACAATAAAAATTACACACAAG
AACCAGGCCCCAATGCTGATGGGACCTCCACCTAAAACTGGATTATTCTGCTCCCTCATCAAAA
GAACAAGAAACCGAAGCAAGGAATGAACCTCCGTCAGGAGAAATTTGAATAGCATACTTGTACC
ACGGAACATTTTGACCCATTTCAAGTCTCCTGCTCCTACAAAATCATGGAATTCACAGTTTTTG
TTATTGAGCTGATGTAAAATTTGGCTATTAGAAAATTTGTTGTCTCTGTTTTCATAGGCGTATT
TGCATGGAAAAAAAGTAGAAATTTATATGATGCGACACAGCGTATTTAAGTTGCATGCACTCAC
ACAGGGTTTCTGTGTCTCCTCCTCACATCTTCTGCCATTTTCATTTACTGACTGTGAGGAAAAA
CCTGCGAAAGATCAAAGAAGTATGATGGGAAAAGATTTCTTATATAATTGCTGTCATTGGCAAG
CAGTAATAACTATGGCTAAAACAACCTCAAGTGCAAACTGTCATCCTTTGCCTATTAGAAAAAT
CACTGCATCCTTGATGTTGGACCCATGACATAGGAAGACGCTAAATTCAAAAATTTTATTAAAA
AGTTGCCCATGATACCATGCTCCATCTAAATACTCTTTTTTAAATCTCTTTACTCTTCCCAGTG
GACATGAGAATATCAGGCATAAGATTTTTTCTTGTGCTAAAACACTAGAAAGTGACTTTTATTT
TGTTTAGCTTTGTTTTTAACTCCAAAAACACGAGAGCAAATATGTTACTAGGAGGAATTGTAGT
AACATAGCAAGCTTTATTCCTTTCTGCATAAGAATCTAGACACAAATGCATAATCACAGTAGTA
GCCAAATGGACGGTTTAAACTATGTGCCAAACGAATCTGTTTCCCACCAAAGATCAGGAATTAG
AGTTCTTACGAGTTTGGGAAAAGTAAAATGTGAGACAAGAATGAGTTACCCATTCATTGTGATA
AAAATGTTCACCATTCAAAACCAGCGAATCATACAGTATAATCAAATCTCAATTGCCAATTTCA
TGGCTATTTGGTGCCCCCACCATATATGTCTGTGATTTTTAATGGATCTGTTAAGTGCACTTCA
GAAGGTAAATGACAGCGTTGGTTCCTTTTTGGGTAGATTGGTACCTGCGACAATACTGAGCTCA
TTGAAGCAACCATGCATGCAATTAGCCTCTTACTAGTTATTCATCCCTGCCCCATCTTTATGAC
ATTTCAAATGTTTGGGGATATATAAAGGCCTCCTTAAGGTGTGTGCATAGCATGATCTGGTCTC
TGATTATTTAAAGAAATGTGCAAGTGCTGCTTTTCATAGTGTTTCTTTGAGGCTATCCTAGGAA
ACGAAATACTTCGGGGCAGTCTCAGTGTGGTTCAGTTACACTGACCTGCATCTCATCACCGCAC
GATTTATGTTTTCAGACGCAACGCCATCAGGAGAATGAGTGCTCGAAATGCATGATTTATCAGC
TTTCCTCTCTGCTCTACATTAAAGTGCTAATGATTTATCAGTTCTATTTTTCTATTGATTCTTT
CATCTTTGAATAACAAATAGCAGTTAGTGATTCTGTTGAACACAACCCCGTGCATGGATTTATT
GATTTCCAGTGAAATTGCTGTAATTTTACTTCTTTCGTTGGAAAACTCAAGTGAATGCTGTTGT
GTCAAATAGCTGCTCTCAAGCAGTGTTCTGTAATGGAAGATTATGTATAAAGTGTATTCCTCTC
GTCGTCCTGGAACATTGGATGCTAAATACCCATCAACAATAACTTTAATTGCTTTAAAAATAAA
AGCTTTTGAATAGAATTAAGACATAATTTAGCTTACCCAGGGAAATGATGATTAAAATTGCAAA
TTCAGTACAGCAATCAGTTGTCCTAGTATAGTAATAATAAAGTAGTTATTCATCAGAATAGTAA
TCTAGACCAAAAGAATGCTCGAAACAACTACAAACGCATCACTCACATAATGTTACATAACACA
TCCTTTGCTTTTGTGCATCTCTGGTTACAGGTAATAAATATTTCTTACACGAATTGATGAGATT
TTTCTACAGTGGGCAGGTAGACCTTGAGCCAAAATGTTATTTTGAATCCACAATAATTTCACGT
TCTGGAGGACATTAAAGCAGCAGTAGTTTCTGAATTATTTGCAGCATCTGGGAAACTGTAGTAG
AAGACTAAAGAACTGGCCTGAATGGTTTCAGTCACTGAATAGTGGGCCCCTGCTGCACTTTAGC
ATGGCTGCATGACCACAACCAGTTCTAGTAGGCACTACATTTCAGTCCATTGGATTCATGGATA
ACCCTAGTAAGTCTTCAAAAGGGAATCAATTTTGACTTTCCTAAATTCGATTTTTTTTAAAAAG
ATAACTGATGTGCTTGCCCTTTGAGTACACTACTCCTGGGGTTTGGAAAGTAGTTTTTTAAAAT
CTACTTTGATGGTTTTGAAATAAGAGAAGATATTCTCTTCTTTTTTATGACAGCTTCGTGTGAA
GAATATATATTTTAAGGAAAATTCTAAATGGAAAGTTCTATGGCATATTAAAATACTGAATAAT
GATTGTTAGCTTAACAAAATGGAAACTTTACTTCCAGGCATGTGGGTGTCGGAGGTGTTGAGTC
AACCTTTTTTAACTATCATAGACATAATAAGTGATAAAGTTCTGAGTGAAGTGGTGTGAAAATG
AATGCTGCACTAGCTTAAAATGGTCAGAGAATCTCAAGGATAGAGTTTCATACCCTGCTAAACA
CTGCCATATACTCAGTTCATAGACAGAAATGACAGATTCTAGAATAAACCTGGAAATGTACACT
TTCAGGAAATAGGAAGGGCGATATCGACGTGCAGTCAGCATTTCAAACGTCACGTGTGTATTTT
CTCACTCTCCGTCATGTGTATTTGATGTGGAGAGTGGCGATCGAGTTTTTGTAATAGAAGAAAA
GATGCTTTACTTTGAATGGGTTATGTGGTTGCTGCCTTTCTAGAGCTCTCTGATCACGGGTTCA
TTGTACGCAGTCTCCTCAAGGCAAGAATGTCTAATGGTAAGCGCGGTGGAGTCACACATCCATT
CCCCTTTGTACACGTGACTTGTATTAGAGAGTGGGGCTAAGTACCTTTACCTGGACCGAATCTG
TTTAAGTCTGAGACTGTCGATGCCACTTACACTAGCTAGGGCTCTTCGGTGGTTCCTTTCCTTT
TTCTGTTAGTGTTCGCTGGTTTTTGATTGGTTTTGAAAGGAACGGTGTATTTTTATGGTACATA
TAACCCTCGAAGAGTTAATCGATGGATAACTTATATTCCACATTAAAGGATATACCTTTCTAGC
ACTTATAGCATATATTGAGACTGTGGGATGTAATAAAAATAATAAATGAATTTAAGAAAAGCCT
TTTGTTCTGTGAAAGACAGAAATCACATCCTTAAACCAGCCAATTGAATTGAATTATGTTTAAA
GGTTTGAGTAAATTCTCATTTGAACCTTTCTATATATTCTTATTGTGTTTAAAACATAGGGTTT
GTTTAATTAAACTATCTTACTTATTTTCTCAGAAAGTGTTATGTACAAATCCTGGTTTTTGAAA
TAAAAGTGTTAACCATTCACTTGTGCATCATTTGTTCTCTTCCAGATGGTCCCTTCATGTGAAA
TATCCATTAGAACATCCTCAGTGGTTTTCCACTAGAGGACCTGTGCAAGCCGCCTTGTCTTAGG
AATAAAAACACTGTGCTTAGGGGTTAAATTACTTGTCATTAAAAACCAAGCCATTCAA

hide sequence

RefSeq Acc Id:

XM_017594330 ⟹ XP_017449819

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	60,368,140 - 61,124,253 (+)	NCBI
mRatBN7.2	6	54,640,950 - 55,393,530 (+)	NCBI
Rnor_6.0	6	57,516,352 - 58,277,385 (+)	NCBI

Sequence:

show sequence

AAGGGCTATAGTAGCAAAAGCAGCCTCAGCAGCCAGGCAGGGCTGTAGCTTGCAGCCAAGCAGA
CCGCCGCCGCCTCATCACCACACACAGACACACACACACACACACACACACACACACACACACA
CACACACACATTGCACACACATCCCGAATCAACGCGTTCTCACACAAATTCTGGACCACGACAG
ATGAGAGAAGAGCAATAGGCACGGACAACAGTGCTTTAACAAATTATTGAAATTACAAACATCA
ACAGCAGTTTCATTTCGACAGAGTCCATATTCTGGAAGTCCAGGCTATTTTATCATGAAACACA
CCTTGTAAAATCTTTGAAGCATTGAATTCTGACCAAGATCTGGATAAAGAAGCCCTCATCTGCT
GTGTAAGAATCTCATCACCTACGCCATGACAAACCAGGAAAAATGGGCCCATCTCAGCCCCTCA
GAATTTTCCCAACTTCAGAAATATGCTGAGTATTCTACAAAGAAATTAAAGGATGTTCTTGAAG
AATTCCATGGTAATGGTGTGCTTGCAAAGTATAATCCTGAAGGGACCATAGATTTTGAAGGATT
CAAGCTGTTCATGAAGACCTTCCTGGAAGCTGAGCTCCCTGACGATTTCACTGCCCACCTTTTC
ATGTCATTCAGCAACAAATTCCCCCATTCCAGCCCCAACGTAAAGAGCAAGCCAGCTCTGCTTT
CAGGTGGTTTGAGGATGAATAAGGGTGCCATCACCCCTCCACGTTCTTCTCCAGCAAATACGTG
CTCCCCGGAAGTGATCCACCTCAAGGATATTGTCTGTTACCTGTCTCTTCTGGAAAGAGGAAGA
CCTGAGGACAAGCTTGAGTTTATGTTTCGCCTGTATGACACCGATGGGAATGGCTTCCTGGACA
GCTCGGAATTAGAAAATATCATCGGTCAGATGATGCATGTTGCCGAGTACCTGGAATGGGATGT
TACTGAACTTAATCCGATCCTTCATGAAATGATGGAAGAAATCGACTATGACCGTGACGGCACT
GTGTCTCTGGAAGAGTGGATTCAAGGAGGAATGACGACTATCCCACTTCTAGTCTTGCTGGGCT
TGGAAAACAATGTGAAGGATGACGGACAGCATGTGTGGCGACTCAAGCACTTTAACAAGCCCGC
CTACTGCAATCTCTGCCTGAACATGCTGATTGGCGTGGGGAAGCAGGGCCTCTGCTGCTCCTTC
TGCAAGTACACCGTCCATGAGCGCTGCGTGGCCAGAGCCCCGCCCTCCTGCATCAAGACCTATG
TGAAGTCCAAGAAGAACACTGACGTCATGCACCATTATTGGGTCGAAGGCAATTGCCCAACCAA
GTGTGATAAGTGCCACAAGACAGTGAAATGTTACCAGGGCCTGACGGGGCTGCACTGTGTTTGG
TGTCAGACCACGCTGCACAATAAATGTGCTTCTCATCTGAAGCCTGAATGTGACTGTGGACCCT
TGAAGGACCATATTTTGCCACCCACCACAATCTGTCCAGTTGTATTGCAGACTATGCCCACTGC
CGGAACTTCAGTTCCTGAGGAAAGACAGTCAACAGCTAAAAAGGAAAAGGGCAGCTCCCAGCAG
CCAAATAAAGTGACAGACAAGAACAAAATGCAAAGAGCTAACTCTGTCACTATGGATGGACAAG
GTTTGCAGATCACTCCTATTCCTGGCACACATCCTCTTCTAGTTTTTGTCAACCCTAAAAGTGG
TGGGAAGCAAGGAGAACGAATTTACAGAAAATTCCAGTATCTTCTAAATCCTCGTCAGGTTTAC
AGTCTTTCTGGAAATGGACCAATGCCAGGGTTACATTTTTTTCGCGATGTCCCTGACTTCAGAG
TGTTAGCATGCGGTGGAGATGGGACTGTGGGCTGGATTTTGGACTGCATAGAAAAGGCCAATGT
AGTCAAGCACCCTCCAGTTGCTATCCTGCCTCTTGGGACGGGCAATGACCTAGCAAGATGCCTG
CGGTGGGGTGGAGGTTATGAAGGTGAAAATCTTATGAAGATCCTAAAAGACATTGAAAGCAGCA
CAGAAATCATGTTGGACAGGTGGAAGTTTGAAGTCACACCCAACGACAAAGACGAGAAAGGAGA
CCCTGTGCCTTACAGCATCATCAACAACTACTTTTCCATTGGCGTGGATGCTTCCATTGCACAC
AGATTCCACATCATGAGAGAAAAGCACCCGGAGAAATTCAACAGCCGAATGAAGAACAAATTTT
GGTACTTTGAGTTTGGCACATCAGAAACCTTCTCAGCCACCTGCAAGAAACTGCATGAATCTGT
AGAAATAGAATGTGATGGAGTACAGATAGATTTGATAAACATCTCTCTGGAAGGAATTGCAATT
TTGAATATACCAAGCATGCATGGAGGATCTAATCTTTGGGGAGAATCTAAAAAGAAAAGAAGTC
ATCGACGGATAGAGAAAAAAGGCTCTGACAAAAGACCCACTCTCACAGATGCAAAAGAACTGAA
GTTTGCAAGTCAAGATCTGAGTGACCAGCTACTGGAGGTTGTTGGCTTGGAAGGAGCAATGGAA
ATGGGCCAAATATACACGGGGCTGAAAAGTGCTGGCCGGCGGCTGGCTCAGTGCTCCTCTGTGG
TTATCAGGACAAGCAAGTCACTGCCAATGCAGATTGATGGAGAGCCATGGATGCAGACCCCATG
CACAATAAAAATTACACACAAGAACCAGGCCCCAATGCTGATGGGACCTCCACCTAAAACTGGA
TTATTCTGCTCCCTCATCAAAAGAACAAGAAACCGAAGCAAGGAATGAACCTCCGTCAGGAGAA
ATTTGAATAGCATACTTGTACCACGGAACATTTTGACCCATTTCAAGTCTCCTGCTCCTACAAA
ATCATGGAATTCACAGTTTTTGTTATTGAGCTGATGTAAAATTTGGCTATTAGAAAATTTGTTG
TCTCTGTTTTCATAGGCGTATTTGCATGGAAAAAAAGTAGAAATTTATATGATGCGACACAGCG
TATTTAAGTTGCATGCACTCACACAGGGTTTCTGTGTCTCCTCCTCACATCTTCTGCCATTTTC
ATTTACTGACTGTGAGGAAAAACCTGCGAAAGATCAAAGAAGTATGATGGGAAAAGATTTCTTA
TATAATTGCTGTCATTGGCAAGCAGTAATAACTATGGCTAAAACAACCTCAAGTGCAAACTGTC
ATCCTTTGCCTATTAGAAAAATCACTGCATCCTTGATGTTGGACCCATGACATAGGAAGACGCT
AAATTCAAAAATTTTATTAAAAAGTTGCCCATGATACCATGCTCCATCTAAATACTCTTTTTTA
AATCTCTTTACTCTTCCCAGTGGACATGAGAATATCAGGCATAAGATTTTTTCTTGTGCTAAAA
CACTAGAAAGTGACTTTTATTTTGTTTAGCTTTGTTTTTAACTCCAAAAACACGAGAGCAAATA
TGTTACTAGGAGGAATTGTAGTAACATAGCAAGCTTTATTCCTTTCTGCATAAGAATCTAGACA
CAAATGCATAATCACAGTAGTAGCCAAATGGACGGTTTAAACTATGTGCCAAACGAATCTGTTT
CCCACCAAAGATCAGGAATTAGAGTTCTTACGAGTTTGGGAAAAGTAAAATGTGAGACAAGAAT
GAGTTACCCATTCATTGTGATAAAAATGTTCACCATTCAAAACCAGCGAATCATACAGTATAAT
CAAATCTCAATTGCCAATTTCATGGCTATTTGGTGCCCCCACCATATATGTCTGTGATTTTTAA
TGGATCTGTTAAGTGCACTTCAGAAGGTAAATGACAGCGTTGGTTCCTTTTTGGGTAGATTGGT
ACCTGCGACAATACTGAGCTCATTGAAGCAACCATGCATGCAATTAGCCTCTTACTAGTTATTC
ATCCCTGCCCCATCTTTATGACATTTCAAATGTTTGGGGATATATAAAGGCCTCCTTAAGGTGT
GTGCATAGCATGATCTGGTCTCTGATTATTTAAAGAAATGTGCAAGTGCTGCTTTTCATAGTGT
TTCTTTGAGGCTATCCTAGGAAACGAAATACTTCGGGGCAGTCTCAGTGTGGTTCAGTTACACT
GACCTGCATCTCATCACCGCACGATTTATGTTTTCAGACGCAACGCCATCAGGAGAATGAGTGC
TCGAAATGCATGATTTATCAGCTTTCCTCTCTGCTCTACATTAAAGTGCTAATGATTTATCAGT
TCTATTTTTCTATTGATTCTTTCATCTTTGAATAACAAATAGCAGTTAGTGATTCTGTTGAACA
CAACCCCGTGCATGGATTTATTGATTTCCAGTGAAATTGCTGTAATTTTACTTCTTTCGTTGGA
AAACTCAAGTGAATGCTGTTGTGTCAAATAGCTGCTCTCAAGCAGTGTTCTGTAATGGAAGATT
ATGTATAAAGTGTATTCCTCTCGTCGTCCTGGAACATTGGATGCTAAATACCCATCAACAATAA
CTTTAATTGCTTTAAAAATAAAAGCTTTTGAATAGAATTAAGACATAATTTAGCTTACCCAGGG
AAATGATGATTAAAATTGCAAATTCAGTACAGCAATCAGTTGTCCTAGTATAGTAATAATAAAG
TAGTTATTCATCAGAATAGTAATCTAGACCAAAAGAATGCTCGAAACAACTACAAACGCATCAC
TCACATAATGTTACATAACACATCCTTTGCTTTTGTGCATCTCTGGTTACAGGTAATAAATATT
TCTTACACGAATTGATGAGATTTTTCTACAGTGGGCAGGTAGACCTTGAGCCAAAATGTTATTT
TGAATCCACAATAATTTCACGTTCTGGAGGACATTAAAGCAGCAGTAGTTTCTGAATTATTTGC
AGCATCTGGGAAACTGTAGTAGAAGACTAAAGAACTGGCCTGAATGGTTTCAGTCACTGAATAG
TGGGCCCCTGCTGCACTTTAGCATGGCTGCATGACCACAACCAGTTCTAGTAGGCACTACATTT
CAGTCCATTGGATTCATGGATAACCCTAGTAAGTCTTCAAAAGGGAATCAATTTTGACTTTCCT
AAATTCGATTTTTTTTAAAAAGATAACTGATGTGCTTGCCCTTTGAGTACACTACTCCTGGGGT
TTGGAAAGTAGTTTTTTAAAATCTACTTTGATGGTTTTGAAATAAGAGAAGATATTCTCTTCTT
TTTTATGACAGCTTCGTGTGAAGAATATATATTTTAAGGAAAATTCTAAATGGAAAGTTCTATG
GCATATTAAAATACTGAATAATGATTGTTAGCTTAACAAAATGGAAACTTTACTTCCAGGCATG
TGGGTGTCGGAGGTGTTGAGTCAACCTTTTTTAACTATCATAGACATAATAAGTGATAAAGTTC
TGAGTGAAGTGGTGTGAAAATGAATGCTGCACTAGCTTAAAATGGTCAGAGAATCTCAAGGATA
GAGTTTCATACCCTGCTAAACACTGCCATATACTCAGTTCATAGACAGAAATGACAGATTCTAG
AATAAACCTGGAAATGTACACTTTCAGGAAATAGGAAGGGCGATATCGACGTGCAGTCAGCATT
TCAAACGTCACGTGTGTATTTTCTCACTCTCCGTCATGTGTATTTGATGTGGAGAGTGGCGATC
GAGTTTTTGTAATAGAAGAAAAGATGCTTTACTTTGAATGGGTTATGTGGTTGCTGCCTTTCTA
GAGCTCTCTGATCACGGGTTCATTGTACGCAGTCTCCTCAAGGCAAGAATGTCTAATGGTAAGC
GCGGTGGAGTCACACATCCATTCCCCTTTGTACACGTGACTTGTATTAGAGAGTGGGGCTAAGT
ACCTTTACCTGGACCGAATCTGTTTAAGTCTGAGACTGTCGATGCCACTTACACTAGCTAGGGC
TCTTCGGTGGTTCCTTTCCTTTTTCTGTTAGTGTTCGCTGGTTTTTGATTGGTTTTGAAAGGAA
CGGTGTATTTTTATGGTACATATAACCCTCGAAGAGTTAATCGATGGATAACTTATATTCCACA
TTAAAGGATATACCTTTCTAGCACTTATAGCATATATTGAGACTGTGGGATGTAATAAAAATAA
TAAATGAATTTAAGAAAAGCCTTTTGTTCTGTGAAAGACAGAAATCACATCCTTAAACCAGCCA
ATTGAATTGAATTATGTTTAAAGGTTTGAGTAAATTCTCATTTGAACCTTTCTATATATTCTTA
TTGTGTTTAAAACATAGGGTTTGTTTAATTAAACTATCTTACTTATTTTCTCAGAAAGTGTTAT
GTACAAATCCTGGTTTTTGAAATAAAAGTGTTAACCATTCACTTGTGCATCATTTGTTCTCTTC
CAGATGGTCCCTTCATGTGAAATATCCATTAGAACATCCTCAGTGGTTTTCCACTAGAGGACCT
GTGCAAGCCGCCTTGTCTTAGGAATAAAAACACTGTGCTTAGGGGTTAAATTACTTGTCATTAA
AAACCAAGCCATTCAA

hide sequence

RefSeq Acc Id:

XM_063262360 ⟹ XP_063118430

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	60,368,141 - 61,124,253 (+)	NCBI

RefSeq Acc Id:

XM_063262361 ⟹ XP_063118431

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	60,368,393 - 61,124,253 (+)	NCBI

RefSeq Acc Id:

XM_063262362 ⟹ XP_063118432

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	60,368,101 - 61,124,253 (+)	NCBI

RefSeq Acc Id:

XM_063262363 ⟹ XP_063118433

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	60,368,393 - 61,124,253 (+)	NCBI

RefSeq Acc Id:

XM_063262364 ⟹ XP_063118434

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	60,368,138 - 61,124,253 (+)	NCBI

RefSeq Acc Id:

XM_063262365 ⟹ XP_063118435

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	60,368,393 - 61,124,253 (+)	NCBI

RefSeq Acc Id:

XM_063262366 ⟹ XP_063118436

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	60,368,140 - 61,124,253 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_062177	(Get FASTA)	NCBI Sequence Viewer
	XP_008762871	(Get FASTA)	NCBI Sequence Viewer
	XP_017449817	(Get FASTA)	NCBI Sequence Viewer
	XP_017449818	(Get FASTA)	NCBI Sequence Viewer
	XP_017449819	(Get FASTA)	NCBI Sequence Viewer
	XP_063118430	(Get FASTA)	NCBI Sequence Viewer
	XP_063118431	(Get FASTA)	NCBI Sequence Viewer
	XP_063118432	(Get FASTA)	NCBI Sequence Viewer
	XP_063118433	(Get FASTA)	NCBI Sequence Viewer
	XP_063118434	(Get FASTA)	NCBI Sequence Viewer
	XP_063118435	(Get FASTA)	NCBI Sequence Viewer
	XP_063118436	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	BAA03675	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000058842
	ENSRNOP00000082015
	ENSRNOP00000106123
GenBank Protein	P49621	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_062177 ⟸ NM_019304

- UniProtKB:

P49621 (UniProtKB/Swiss-Prot), F1LP01 (UniProtKB/TrEMBL), A6HBB8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTNQEKWAHLSPSEFSQLQKYAEYSTKKLKDVLEEFHGNGVLAKYNPEGKQDILNQTIDFEGFK
LFMKTFLEAELPDDFTAHLFMSFSNKFPHSSPNVKSKPALLSGGLRMNKGAITPPRSSPANTCF
PEVIHLKDIVCYLSLLERGRPEDKLEFMFRLYDTDGNGFLDSSELENIIGQMMHVAEYLEWDVT
ELNPILHEMMEEIDYDRDGTVSLEEWIQGGMTTIPLLVLLGLENNVKDDGQHVWRLKHFNKPAY
CNLCLNMLIGVGKQGLCCSFCKYTVHERCARAPPSCIKTYVKSKKNTDVMHHYWVEGNCPTKCD
KCHKTVKCYQGLTGLHCVWCQTTLHNKCASHLKPECDCGPLKDHILPPTTICPVVLTMPTAGTS
VPEERQSTAKKEKGSSQQPNKVTDKNKMQRANSVTMDGQGLQITPIPGTHPLLVFVNPKSGGKQ
GERIYRKFQYLLNPRQVYSLSGNGPMPGLHFFRDVPDFRVLACGGDGTVGWILDCIEKANVVKH
PPVAILPLGTGNDLARCLRWGGGYEGENLMKILKDIESSTEIMLDRWKFEVTPNDKDEKGDPVP
YSIINNYFSIGVDASIAHRFHIMREKHPEKFNSRMKNKFWYFEFGTSETFSATCKKLHESVEIE
CDGVQIDLINISLQGIAILNIPSMHGGSNLWGESKKKRSHRRIEKKGSDKRPTLTDAKELKFAS
QDLSDQLLEVVGLEGAMEMGQIYTGLKSAGRRLAQCSSVVIRTSKSLPMQIDGEPWMQTPCTIK
ITHKNQAPMLMGPPPKTGLFCSLIKRTRNRSKE

hide sequence

RefSeq Acc Id:	XP_008762871 ⟸ XM_008764649
- Peptide Label:	isoform X1
- UniProtKB:	P49621 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MTNQEKWAHLSPSEFSQLQKYAEYSTKKLKDVLEEFHGNGVLAKYNPEGKQDILNQTIDFEGFK LFMKTFLEAELPDDFTAHLFMSFSNKFPHSSPNVKSKPALLSGGLRMNKGAITPPRSSPANTCS PEVIHLKDIVCYLSLLERGRPEDKLEFMFRLYDTDGNGFLDSSELENIIGQMMHVAEYLEWDVT ELNPILHEMMEEIDYDRDGTVSLEEWIQGGMTTIPLLVLLGLENNVKDDGQHVWRLKHFNKPAY CNLCLNMLIGVGKQGLCCSFCKYTVHERCVARAPPSCIKTYVKSKKNTDVMHHYWVEGNCPTKC DKCHKTVKCYQGLTGLHCVWCQTTLHNKCASHLKPECDCGPLKDHILPPTTICPVVLQTMPTAG TSVPEERQSTAKKEKGSSQQPNKVTDKNKMQRANSVTMDGQGLQITPIPGTHPLLVFVNPKSGG KQGERIYRKFQYLLNPRQVYSLSGNGPMPGLHFFRDVPDFRVLACGGDGTVGWILDCIEKANVV KHPPVAILPLGTGNDLARCLRWGGGYEGENLMKILKDIESSTEIMLDRWKFEVTPNDKDEKGDP VPYSIINNYFSIGVDASIAHRFHIMREKHPEKFNSRMKNKFWYFEFGTSETFSATCKKLHESVE IECDGVQIDLINISLEGIAILNIPSMHGGSNLWGESKKKRSHRRIEKKGSDKRPTLTDAKELKF ASQDLSDQLLEVVGLEGAMEMGQIYTGLKSAGRRLAQCSSVVIRTSKSLPMQIDGEPWMQTPCT IKITHKNQAPMLMGPPPKTGLFCSLIKRTRNRSKE hide sequence

RefSeq Acc Id:	XP_017449817 ⟸ XM_017594328
- Peptide Label:	isoform X1
- UniProtKB:	P49621 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MTNQEKWAHLSPSEFSQLQKYAEYSTKKLKDVLEEFHGNGVLAKYNPEGKQDILNQTIDFEGFK LFMKTFLEAELPDDFTAHLFMSFSNKFPHSSPNVKSKPALLSGGLRMNKGAITPPRSSPANTCS PEVIHLKDIVCYLSLLERGRPEDKLEFMFRLYDTDGNGFLDSSELENIIGQMMHVAEYLEWDVT ELNPILHEMMEEIDYDRDGTVSLEEWIQGGMTTIPLLVLLGLENNVKDDGQHVWRLKHFNKPAY CNLCLNMLIGVGKQGLCCSFCKYTVHERCVARAPPSCIKTYVKSKKNTDVMHHYWVEGNCPTKC DKCHKTVKCYQGLTGLHCVWCQTTLHNKCASHLKPECDCGPLKDHILPPTTICPVVLQTMPTAG TSVPEERQSTAKKEKGSSQQPNKVTDKNKMQRANSVTMDGQGLQITPIPGTHPLLVFVNPKSGG KQGERIYRKFQYLLNPRQVYSLSGNGPMPGLHFFRDVPDFRVLACGGDGTVGWILDCIEKANVV KHPPVAILPLGTGNDLARCLRWGGGYEGENLMKILKDIESSTEIMLDRWKFEVTPNDKDEKGDP VPYSIINNYFSIGVDASIAHRFHIMREKHPEKFNSRMKNKFWYFEFGTSETFSATCKKLHESVE IECDGVQIDLINISLEGIAILNIPSMHGGSNLWGESKKKRSHRRIEKKGSDKRPTLTDAKELKF ASQDLSDQLLEVVGLEGAMEMGQIYTGLKSAGRRLAQCSSVVIRTSKSLPMQIDGEPWMQTPCT IKITHKNQAPMLMGPPPKTGLFCSLIKRTRNRSKE hide sequence

RefSeq Acc Id:	XP_017449819 ⟸ XM_017594330
- Peptide Label:	isoform X3
- UniProtKB:	P49621 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MTNQEKWAHLSPSEFSQLQKYAEYSTKKLKDVLEEFHGNGVLAKYNPEGTIDFEGFKLFMKTFL EAELPDDFTAHLFMSFSNKFPHSSPNVKSKPALLSGGLRMNKGAITPPRSSPANTCSPEVIHLK DIVCYLSLLERGRPEDKLEFMFRLYDTDGNGFLDSSELENIIGQMMHVAEYLEWDVTELNPILH EMMEEIDYDRDGTVSLEEWIQGGMTTIPLLVLLGLENNVKDDGQHVWRLKHFNKPAYCNLCLNM LIGVGKQGLCCSFCKYTVHERCVARAPPSCIKTYVKSKKNTDVMHHYWVEGNCPTKCDKCHKTV KCYQGLTGLHCVWCQTTLHNKCASHLKPECDCGPLKDHILPPTTICPVVLQTMPTAGTSVPEER QSTAKKEKGSSQQPNKVTDKNKMQRANSVTMDGQGLQITPIPGTHPLLVFVNPKSGGKQGERIY RKFQYLLNPRQVYSLSGNGPMPGLHFFRDVPDFRVLACGGDGTVGWILDCIEKANVVKHPPVAI LPLGTGNDLARCLRWGGGYEGENLMKILKDIESSTEIMLDRWKFEVTPNDKDEKGDPVPYSIIN NYFSIGVDASIAHRFHIMREKHPEKFNSRMKNKFWYFEFGTSETFSATCKKLHESVEIECDGVQ IDLINISLEGIAILNIPSMHGGSNLWGESKKKRSHRRIEKKGSDKRPTLTDAKELKFASQDLSD QLLEVVGLEGAMEMGQIYTGLKSAGRRLAQCSSVVIRTSKSLPMQIDGEPWMQTPCTIKITHKN QAPMLMGPPPKTGLFCSLIKRTRNRSKE hide sequence

RefSeq Acc Id:	XP_017449818 ⟸ XM_017594329
- Peptide Label:	isoform X3
- UniProtKB:	P49621 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MTNQEKWAHLSPSEFSQLQKYAEYSTKKLKDVLEEFHGNGVLAKYNPEGTIDFEGFKLFMKTFL EAELPDDFTAHLFMSFSNKFPHSSPNVKSKPALLSGGLRMNKGAITPPRSSPANTCSPEVIHLK DIVCYLSLLERGRPEDKLEFMFRLYDTDGNGFLDSSELENIIGQMMHVAEYLEWDVTELNPILH EMMEEIDYDRDGTVSLEEWIQGGMTTIPLLVLLGLENNVKDDGQHVWRLKHFNKPAYCNLCLNM LIGVGKQGLCCSFCKYTVHERCVARAPPSCIKTYVKSKKNTDVMHHYWVEGNCPTKCDKCHKTV KCYQGLTGLHCVWCQTTLHNKCASHLKPECDCGPLKDHILPPTTICPVVLQTMPTAGTSVPEER QSTAKKEKGSSQQPNKVTDKNKMQRANSVTMDGQGLQITPIPGTHPLLVFVNPKSGGKQGERIY RKFQYLLNPRQVYSLSGNGPMPGLHFFRDVPDFRVLACGGDGTVGWILDCIEKANVVKHPPVAI LPLGTGNDLARCLRWGGGYEGENLMKILKDIESSTEIMLDRWKFEVTPNDKDEKGDPVPYSIIN NYFSIGVDASIAHRFHIMREKHPEKFNSRMKNKFWYFEFGTSETFSATCKKLHESVEIECDGVQ IDLINISLEGIAILNIPSMHGGSNLWGESKKKRSHRRIEKKGSDKRPTLTDAKELKFASQDLSD QLLEVVGLEGAMEMGQIYTGLKSAGRRLAQCSSVVIRTSKSLPMQIDGEPWMQTPCTIKITHKN QAPMLMGPPPKTGLFCSLIKRTRNRSKE hide sequence

Ensembl Acc Id:

ENSRNOP00000058842 ⟸ ENSRNOT00000063874

Ensembl Acc Id:

ENSRNOP00000082015 ⟸ ENSRNOT00000111621

RefSeq Acc Id:	XP_063118432 ⟸ XM_063262362
- Peptide Label:	isoform X4
- UniProtKB:	P49621 (UniProtKB/Swiss-Prot), A0A8I5ZWT2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118434 ⟸ XM_063262364
- Peptide Label:	isoform X5
- UniProtKB:	P49621 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063118436 ⟸ XM_063262366
- Peptide Label:	isoform X6
- UniProtKB:	P49621 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063118430 ⟸ XM_063262360
- Peptide Label:	isoform X2
- UniProtKB:	P49621 (UniProtKB/Swiss-Prot), A6HBB8 (UniProtKB/TrEMBL), F1LP01 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118433 ⟸ XM_063262363
- Peptide Label:	isoform X5
- UniProtKB:	P49621 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063118431 ⟸ XM_063262361
- Peptide Label:	isoform X4
- UniProtKB:	P49621 (UniProtKB/Swiss-Prot), A0A8I5ZWT2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118435 ⟸ XM_063262365
- Peptide Label:	isoform X6
- UniProtKB:	P49621 (UniProtKB/Swiss-Prot)

Ensembl Acc Id:

ENSRNOP00000106123 ⟸ ENSRNOT00000134799

Protein Domains

DAGKc EF-hand Phorbol-ester/DAG-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P49621-F1-model_v2	AlphaFold	P49621	1-801	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:2488	AgrOrtholog
BioCyc Gene	G2FUF-37770	BioCyc
Ensembl Genes	ENSRNOG00000030771	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000063874	ENTREZGENE
	ENSRNOT00000111621	ENTREZGENE
	ENSRNOT00000134799	ENTREZGENE
Gene3D-CATH	1.10.238.110	UniProtKB/Swiss-Prot
	2.60.200.40	UniProtKB/Swiss-Prot
	3.30.60.20	UniProtKB/Swiss-Prot
	EF-hand	UniProtKB/Swiss-Prot
	Probable inorganic polyphosphate/atp-NAD kinase, domain 1	UniProtKB/Swiss-Prot
InterPro	ATP-NAD_kinase_N	UniProtKB/Swiss-Prot
	C1-like_sf	UniProtKB/Swiss-Prot
	C1_DGKbeta-like_rpt1	UniProtKB/Swiss-Prot
	C1_DGKbeta_rpt2	UniProtKB/Swiss-Prot
	DAG_kinase_typeI_N	UniProtKB/Swiss-Prot
	DGK	UniProtKB/Swiss-Prot
	DGK_typeI_N_sf	UniProtKB/Swiss-Prot
	Diacylglycerol_kin_accessory	UniProtKB/Swiss-Prot
	Diacylglycerol_kinase_cat_dom	UniProtKB/Swiss-Prot
	EF-hand-dom_pair	UniProtKB/Swiss-Prot
	EF_Hand_1_Ca_BS	UniProtKB/Swiss-Prot
	EF_hand_dom	UniProtKB/Swiss-Prot
	NAD/diacylglycerol_kinase_sf	UniProtKB/Swiss-Prot
	PE/DAG-bd	UniProtKB/Swiss-Prot
KEGG Report	rno:54248	UniProtKB/Swiss-Prot
NCBI Gene	54248	ENTREZGENE
PANTHER	DIACYLGLYCEROL KINASE BETA	UniProtKB/Swiss-Prot
	PTHR11255	UniProtKB/Swiss-Prot
Pfam	C1_1	UniProtKB/Swiss-Prot
	DAG_kinase_N	UniProtKB/Swiss-Prot
	DAGK_acc	UniProtKB/Swiss-Prot
	DAGK_cat	UniProtKB/Swiss-Prot
	EF-hand_7	UniProtKB/Swiss-Prot
PhenoGen	Dgkb	PhenoGen
PROSITE	DAGK	UniProtKB/Swiss-Prot
	EF_HAND_1	UniProtKB/Swiss-Prot
	EF_HAND_2	UniProtKB/Swiss-Prot
	ZF_DAG_PE_1	UniProtKB/Swiss-Prot
	ZF_DAG_PE_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000030771	RatGTEx
SMART	DAGKa	UniProtKB/Swiss-Prot
	DAGKc	UniProtKB/Swiss-Prot
	EFh	UniProtKB/Swiss-Prot
	SM00109	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF111331	UniProtKB/Swiss-Prot
	SSF47473	UniProtKB/Swiss-Prot
	SSF57889	UniProtKB/Swiss-Prot
TIGR	TC231297
UniProt	A0A8I5ZWT2	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LQN6_RAT	UniProtKB/TrEMBL
	A6HBB8	ENTREZGENE, UniProtKB/TrEMBL
	DGKB_RAT	UniProtKB/Swiss-Prot
	F1LP01	ENTREZGENE, UniProtKB/TrEMBL
	P49621	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2002-11-06	Dgkb	diacylglycerol kinase, beta	Dagk	Diacylglycerol kinase 90kDa	Symbol and Name updated	625702	APPROVED
2002-06-10	Dagk	Diacylglycerol kinase 90kDa			Symbol and Name status set to approved	70586	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_cellular_localization	protein localized to membrane fractions	728585
gene_domains	protein contains an EF-hand motif, a cysteine-rich zinc-finger like sequence, and a putative ATP-binding site	728585
gene_expression	mRNA expressed specifically in neuronal populations, including caudate-putamen, accumbens nucleus and the olfactory tubercle	728585
gene_protein	90 kDA protein is made up of 801 amino acids	728585

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)