Symbol:
Scimp
Name:
SLP adaptor and CSK interacting membrane protein
RGD ID:
1593299
Description:
Predicted to enable molecular adaptor activity. Predicted to be involved in several processes, including pattern recognition receptor signaling pathway; positive regulation of cytokine production; and positive regulation of signal transduction. Predicted to be located in several cellular components, including ruffle; tetraspanin-enriched microdomain; and uropod membrane. Predicted to be part of receptor complex. Predicted to be active in immunological synapse. Orthologous to human SCIMP (SLP adaptor and CSK interacting membrane protein); INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
hypothetical protein LOC691993; LOC691993
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 10 56,006,243 - 56,026,357 (-) NCBI GRCr8 mRatBN7.2 10 55,507,646 - 55,527,764 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 10 55,507,519 - 55,528,171 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 10 60,188,521 - 60,208,528 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 10 59,677,041 - 59,697,050 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 10 55,176,136 - 55,196,131 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 10 57,415,429 - 57,436,412 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 10 57,415,832 - 57,436,368 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 10 57,162,107 - 57,182,188 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 10 57,687,664 - 57,707,493 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 10 54,653,780 - 54,674,340 (-) NCBI Celera Cytogenetic Map 10 q24 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Scimp Rat 17beta-estradiol multiple interactions EXP 6480464 [estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of SCIMP mRNA CTD PMID:32741896 Scimp Rat 17beta-estradiol decreases expression ISO Scimp (Mus musculus) 6480464 Estradiol results in decreased expression of SCIMP mRNA CTD PMID:39298647 Scimp Rat 17beta-estradiol 3-benzoate multiple interactions EXP 6480464 [estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of SCIMP mRNA CTD PMID:32741896 Scimp Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression ISO Scimp (Mus musculus) 6480464 Tetrachlorodibenzodioxin results in increased expression of SCIMP mRNA CTD PMID:26290441 Scimp Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression EXP 6480464 Tetrachlorodibenzodioxin affects the expression of SCIMP mRNA CTD PMID:34747641 Scimp Rat 4-aminobenzohydrazide multiple interactions ISO SCIMP (Homo sapiens) 6480464 4-aminobenzhydrazide inhibits the reaction [hydroxyhydroquinone results in decreased expression of SCIMP mRNA] CTD PMID:24530881 Scimp Rat all-trans-retinoic acid increases expression ISO SCIMP (Homo sapiens) 6480464 Tretinoin results in increased expression of SCIMP mRNA CTD PMID:33167477 Scimp Rat amiodarone increases expression ISO SCIMP (Homo sapiens) 6480464 Amiodarone results in increased expression of SCIMP mRNA CTD PMID:19774075 Scimp Rat amphetamine increases expression EXP 6480464 Amphetamine results in increased expression of SCIMP mRNA CTD PMID:30779732 Scimp Rat benzene-1,2,4-triol multiple interactions ISO SCIMP (Homo sapiens) 6480464 4-aminobenzhydrazide inhibits the reaction [hydroxyhydroquinone results in decreased expression of SCIMP mRNA] CTD PMID:24530881 Scimp Rat benzene-1,2,4-triol decreases expression ISO SCIMP (Homo sapiens) 6480464 hydroxyhydroquinone results in decreased expression of SCIMP mRNA CTD PMID:24530881 Scimp Rat bis(2-ethylhexyl) phthalate decreases expression ISO SCIMP (Homo sapiens) 6480464 Diethylhexyl Phthalate results in decreased expression of SCIMP mRNA CTD PMID:31163220 Scimp Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of SCIMP mRNA CTD PMID:25181051 Scimp Rat carbon nanotube increases expression ISO Scimp (Mus musculus) 6480464 Nanotubes more ... CTD PMID:25554681 Scimp Rat chlorpyrifos increases expression ISO Scimp (Mus musculus) 6480464 Chlorpyrifos results in increased expression of SCIMP mRNA CTD PMID:37019170 Scimp Rat dioxygen multiple interactions EXP 6480464 [Oxygen deficiency co-treated with Blood Glucose deficiency co-treated with Particulate Matter] results in increased expression of SCIMP mRNA CTD PMID:33729688 Scimp Rat GSK-J4 decreases expression ISO SCIMP (Homo sapiens) 6480464 GSK-J4 results in decreased expression of SCIMP mRNA CTD PMID:29301935 Scimp Rat lipopolysaccharide multiple interactions ISO SCIMP (Homo sapiens) 6480464 [S-(1 more ... CTD PMID:35811015 Scimp Rat nickel atom decreases expression ISO SCIMP (Homo sapiens) 6480464 Nickel results in decreased expression of SCIMP mRNA CTD PMID:23195993 Scimp Rat okadaic acid decreases expression ISO SCIMP (Homo sapiens) 6480464 Okadaic Acid results in decreased expression of SCIMP mRNA CTD PMID:38832940 Scimp Rat ozone multiple interactions ISO SCIMP (Homo sapiens) 6480464 [Air Pollutants results in increased abundance of Ozone] which affects the expression of SCIMP mRNA CTD PMID:35430440 Scimp Rat S-(1,2-dichlorovinyl)-L-cysteine multiple interactions ISO SCIMP (Homo sapiens) 6480464 [S-(1 more ... CTD PMID:35811015 Scimp Rat S-(1,2-dichlorovinyl)-L-cysteine decreases expression ISO SCIMP (Homo sapiens) 6480464 S-(1 and 2-dichlorovinyl)cysteine results in decreased expression of SCIMP mRNA CTD PMID:35811015 Scimp Rat silicon dioxide increases expression ISO Scimp (Mus musculus) 6480464 Silicon Dioxide results in increased expression of SCIMP mRNA CTD PMID:38811393 Scimp Rat sodium arsenite increases expression ISO Scimp (Mus musculus) 6480464 sodium arsenite results in increased expression of SCIMP mRNA CTD PMID:37682722 Scimp Rat testosterone multiple interactions EXP 6480464 [estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of SCIMP mRNA CTD PMID:32741896 Scimp Rat thioacetamide increases expression EXP 6480464 Thioacetamide results in increased expression of SCIMP mRNA CTD PMID:34492290 Scimp Rat titanium dioxide decreases expression ISO Scimp (Mus musculus) 6480464 titanium dioxide results in decreased expression of SCIMP mRNA CTD PMID:29264374 Scimp Rat zidovudine multiple interactions ISO SCIMP (Homo sapiens) 6480464 [Zidovudine co-treated with IFNA1 protein] results in increased expression of SCIMP mRNA CTD PMID:20370541
Scimp Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 10 56,006,243 - 56,026,357 (-) NCBI GRCr8 mRatBN7.2 10 55,507,646 - 55,527,764 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 10 55,507,519 - 55,528,171 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 10 60,188,521 - 60,208,528 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 10 59,677,041 - 59,697,050 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 10 55,176,136 - 55,196,131 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 10 57,415,429 - 57,436,412 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 10 57,415,832 - 57,436,368 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 10 57,162,107 - 57,182,188 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 10 57,687,664 - 57,707,493 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 10 54,653,780 - 54,674,340 (-) NCBI Celera Cytogenetic Map 10 q24 NCBI
SCIMP Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 17 5,208,920 - 5,234,860 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 17 5,208,920 - 5,234,860 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 17 5,112,215 - 5,138,155 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 17 5,054,429 - 5,078,861 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 17 5,131,553 - 5,155,751 (-) NCBI Celera Cytogenetic Map 17 p13.2 NCBI HuRef 17 5,002,250 - 5,028,271 (-) NCBI HuRef CHM1_1 17 5,121,885 - 5,147,910 (-) NCBI CHM1_1 T2T-CHM13v2.0 17 5,102,281 - 5,128,266 (-) NCBI T2T-CHM13v2.0
Scimp Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 11 70,681,758 - 70,703,387 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 11 70,681,758 - 70,703,412 (-) Ensembl GRCm39 Ensembl GRCm38 11 70,790,932 - 70,812,561 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 11 70,790,932 - 70,812,586 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 11 70,604,434 - 70,626,063 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 11 70,606,885 - 70,628,782 (-) NCBI MGSCv36 mm8 Celera 11 78,344,966 - 78,367,476 (-) NCBI Celera Cytogenetic Map 11 B3 NCBI cM Map 11 43.21 NCBI
Scimp Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955467 10,547,294 - 10,578,387 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955467 10,547,706 - 10,578,355 (-) NCBI ChiLan1.0 ChiLan1.0
SCIMP Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 19 12,805,039 - 12,845,040 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 17 14,788,690 - 14,813,413 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 17 5,258,376 - 5,283,747 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 17 5,246,916 - 5,271,070 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 17 5,247,307 - 5,270,817 (-) Ensembl panpan1.1 panPan2
SCIMP Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 5 31,534,470 - 31,551,441 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 5 31,534,226 - 31,549,175 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 5 31,672,061 - 31,690,180 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 5 31,637,350 - 31,655,483 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 5 31,637,892 - 31,655,929 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 5 31,604,024 - 31,622,156 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 5 31,563,742 - 31,581,868 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 5 31,740,051 - 31,758,169 (+) NCBI UU_Cfam_GSD_1.0
Scimp Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405602 53,314,099 - 53,325,720 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936677 2,579,010 - 2,586,002 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936677 2,575,255 - 2,585,969 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
SCIMP Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 12 51,773,448 - 51,794,104 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 12 51,772,635 - 51,794,107 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 12 53,805,596 - 53,826,360 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
SCIMP
Scimp
.
Predicted Target Of
Count of predictions: 32 Count of miRNA genes: 32 Interacting mature miRNAs: 32 Transcripts: ENSRNOT00000056608 Prediction methods: Miranda, Rnahybrid Result types: miRGate_prediction
61441 Btemp1 Thermal response to stress QTL 1 4 body temperature trait (VT:0005535) core body temperature (CMO:0001036) 10 35392457 63642539 Rat 1549846 Scl47 Serum cholesterol level QTL 47 3.6 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 10 50574707 95574707 Rat 9589136 Insul27 Insulin level QTL 27 10.46 0.001 blood insulin amount (VT:0001560) plasma insulin level (CMO:0000342) 10 11474010 56474010 Rat 152025229 Scl83 Serum cholesterol level QTL 83 4.33 blood cholesterol amount (VT:0000180) 10 35710580 68663659 Rat 1578779 Tcas10 Tongue tumor susceptibility QTL 10 3.12 tongue integrity trait (VT:0010553) number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950) 10 31297439 76297439 Rat 152025227 Bw195 Body weight QTL 195 5.73 body mass (VT:0001259) 10 46989699 68663659 Rat 631564 Apr3 Acute phase response QTL 3 3.9 blood interleukin-6 amount (VT:0008595) plasma interleukin-6 level (CMO:0001927) 10 15275955 60275955 Rat 1298069 Bp168 Blood pressure QTL 168 5.5 blood pressure trait (VT:0000183) systolic blood pressure (CMO:0000004) 10 26521957 98003205 Rat 2293669 Bmd33 Bone mineral density QTL 33 4.5 0.0001 femur strength trait (VT:0010010) femoral neck polar moment of inertia (CMO:0001670) 10 49444551 81709989 Rat 152025224 Bw193 Body weight QTL 193 6.47 body mass (VT:0001259) 10 51663405 75085664 Rat 631552 Vetf2 Vascular elastic tissue fragility QTL 2 4.5 0.0002 aorta elastic tissue integrity trait (VT:0010556) artery internal elastic lamina non-tumorous lesion count (CMO:0001913) 10 41142633 86142633 Rat 631554 Bp133 Blood pressure QTL 133 0.005 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 743364 63851208 Rat 631557 Bp136 Blood pressure QTL 136 0.003 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 30632053 75632053 Rat 61325 Aia5 Adjuvant induced arthritis QTL 5 0.01 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 23444813 104060283 Rat 1298078 Stresp5 Stress response QTL 5 2.99 0.00025 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 10 42045676 104670812 Rat 2293679 Bmd30 Bone mineral density QTL 30 3.5 0.0001 femur mineral mass (VT:0010011) total volumetric bone mineral density (CMO:0001728) 10 49444551 81709989 Rat 1578762 Toxo1 Toxoplasma gondii resistance QTL 1 brain integrity trait (VT:0010579) percentage of study population displaying Toxoplasma gondii brain cysts at a point in time (CMO:0002028) 10 52200030 59378278 Rat 2298544 Neuinf9 Neuroinflammation QTL 9 4.6 nervous system integrity trait (VT:0010566) spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126) 10 5801990 62146030 Rat 70164 Bw21 Body weight QTL 21 4.36 0.00005 body mass (VT:0001259) body weight (CMO:0000012) 10 53797494 98952626 Rat 61463 Bp12 Blood pressure QTL 12 6.3 0.0001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 41333258 86333258 Rat 8694173 Bw149 Body weight QTL 149 4.38 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 10 44441699 89441699 Rat 2300218 Hpcl2 Hepatic cholesterol level QTL 2 liver cholesterol amount (VT:0010498) liver cholesterol level (CMO:0001597) 10 45029650 95600334 Rat 1554317 Bmd4 Bone mineral density QTL 4 9.4 0.0001 lumbar vertebra mineral mass (VT:0010511) volumetric bone mineral density (CMO:0001553) 10 19816042 99406971 Rat 70171 Cari1 Carrageenan-induced inflammation QTL 1 4.9 0.0005 hypodermis integrity trait (VT:0010550) inflammatory exudate volume (CMO:0001429) 10 53797385 107211142 Rat 1598852 Anxrr19 Anxiety related response QTL 19 5.07 body movement coordination trait (VT:0005424) number of rearing movements in an experimental apparatus (CMO:0001752) 10 18167841 63167841 Rat 1581497 Esta1 Estrogen-induced thymic atrophy QTL 1 thymus mass (VT:0004954) thymus wet weight (CMO:0000855) 10 21329805 61345413 Rat 724527 Bp148 Blood pressure QTL 148 0.0001 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 28453136 73453136 Rat 1358897 Stresp6 Stress response QTL 6 4.17 0.022 blood norepinephrine amount (VT:0005663) plasma norepinephrine level (CMO:0001010) 10 35392267 64155584 Rat 1331762 Rf40 Renal function QTL 40 3.873 kidney blood vessel physiology trait (VT:0100012) absolute change in renal vascular resistance (CMO:0001900) 10 29299504 64155584 Rat 2300171 Bmd58 Bone mineral density QTL 58 4.9 0.0001 lumbar vertebra mineral mass (VT:0010511) volumetric bone mineral density (CMO:0001553) 10 26944628 71944628 Rat 61354 Pia10 Pristane induced arthritis QTL 10 0.01 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 23444813 104060283 Rat 2301967 Cm73 Cardiac mass QTL 73 4.55 heart left ventricle mass (VT:0007031) heart left ventricle weight to body weight ratio (CMO:0000530) 10 14487011 89062041 Rat 2303118 Mamtr7 Mammary tumor resistance QTL 7 0.003 mammary gland integrity trait (VT:0010552) mammary tumor growth rate (CMO:0000344) 10 9658275 104670812 Rat 70188 BpQTLcluster1 Blood pressure QTL cluster 1 4.864 arterial blood pressure trait (VT:2000000) pulse pressure (CMO:0000292) 1 42323132 87323132 Rat 9590310 Scort19 Serum corticosterone level QTL 19 6.3 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 10 11474010 56474010 Rat 9589030 Epfw9 Epididymal fat weight QTL 9 19.24 0.001 epididymal fat pad mass (VT:0010421) epididymal fat pad weight to body weight ratio (CMO:0000658) 10 44441699 89441699 Rat 10402859 Bp381 Blood pressure QTL 381 0.002 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 27606468 72606468 Rat 2316949 Gluco60 Glucose level QTL 60 3.7 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 10 14487011 107057807 Rat 2293652 Bmd22 Bone mineral density QTL 22 4.9 0.0001 femur mineral mass (VT:0010011) total volumetric bone mineral density (CMO:0001728) 10 49444551 81709989 Rat 70198 BpQTLcluster9 Blood pressure QTL cluster 9 2.94 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 42323132 87323132 Rat 1359017 Hrtrt21 Heart rate QTL 21 2.4 heart pumping trait (VT:2000009) heart rate (CMO:0000002) 10 51772940 96772940 Rat 2306787 Ean3 Experimental allergic neuritis QTL 3 3.1 nervous system integrity trait (VT:0010566) body weight loss (CMO:0001399) 10 53797385 66979128 Rat 6893352 Bw100 Body weight QTL 100 0.33 0.6 body mass (VT:0001259) body weight (CMO:0000012) 1 15906665 60906665 Rat 724556 Pur2 Proteinuria QTL 2 5.5 urine protein amount (VT:0005160) urine protein level (CMO:0000591) 10 22427500 90627625 Rat 8662860 Vetf10 Vascular elastic tissue fragility QTL 10 artery integrity trait (VT:0010639) number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562) 10 6154182 73453136 Rat 61387 Bp1 Blood pressure QTL 1 5.1 arterial blood pressure trait (VT:2000000) diastolic blood pressure (CMO:0000005) 10 51770177 107211142 Rat 1354585 Eae18a Experimental allergic encephalomyelitis QTL 18a 7.5 0.0004 nervous system integrity trait (VT:0010566) experimental autoimmune encephalomyelitis severity score (CMO:0001419) 10 53797385 58445852 Rat 70223 Bp57 Blood pressure QTL 57 5 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 1 80676123 Rat 1354587 Kidm21 Kidney mass QTL 21 3.3 kidney mass (VT:0002707) right kidney wet weight (CMO:0000082) 10 15028513 60430477 Rat 6893350 Bw99 Body weight QTL 99 0.87 0.16 body mass (VT:0001259) body weight (CMO:0000012) 1 15906665 60906665 Rat 2317043 Aia7 Adjuvant induced arthritis QTL 7 3.82 joint integrity trait (VT:0010548) left rear ankle joint diameter (CMO:0002149) 10 37565079 82565079 Rat 70224 Eae3 Experimental allergic encephalomyelitis QTL 3 4.1 nervous system integrity trait (VT:0010566) experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046) 10 26521957 61345413 Rat 2317042 Aia20 Adjuvant induced arthritis QTL 20 3.38 joint integrity trait (VT:0010548) right rear ankle joint diameter (CMO:0002150) 10 37565079 82565079 Rat 1331791 Cm31 Cardiac mass QTL 31 3.84606 heart mass (VT:0007028) heart wet weight (CMO:0000069) 10 29299504 107211142 Rat 2313087 Bmd80 Bone mineral density QTL 80 3.2 0.0001 tibia mineral mass (VT:1000283) total volumetric bone mineral density (CMO:0001728) 10 19606483 64606483 Rat 2298495 Eae23 Experimental allergic encephalomyelitis QTL 23 16.93 nervous system integrity trait (VT:0010566) experimental autoimmune encephalomyelitis duration (CMO:0001424) 10 55273696 60677262 Rat 70364 Bp72 Blood pressure QTL 72 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 51121100 96121100 Rat 631530 Tls3 T-lymphoma susceptibility QTL 3 0 0.0001 thymus integrity trait (VT:0010555) percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911) 10 51774612 95600334 Rat 1354608 Cm33 Cardiac mass QTL 33 2.8 heart left ventricle mass (VT:0007031) heart left ventricle wet weight (CMO:0000071) 10 54809292 99809292 Rat 631535 Cm51 Cardiac mass QTL 51 3 heart mass (VT:0007028) calculated heart weight (CMO:0000073) 10 51786282 91669536 Rat 1576319 Cia29 Collagen induced arthritis QTL 29 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 33973921 78973921 Rat 8552805 Bw145 Body weight QTL 145 2.2 body mass (VT:0001259) change in body weight to body weight ratio (CMO:0002216) 10 41944526 78307017 Rat 631267 Cia20 Collagen induced arthritis QTL 20 3.2 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 23444813 104060283 Rat 2293705 Bmd25 Bone mineral density QTL 25 7.1 0.0001 femur mineral mass (VT:0010011) compact volumetric bone mineral density (CMO:0001730) 10 49444551 81709989 Rat 1576308 Schws1 Schwannoma susceptibility QTL 1 0.0041 nervous system integrity trait (VT:0010566) percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017) 10 40035094 102359817 Rat 631269 Cia22 Collagen induced arthritis QTL 22 8.9 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 40035094 104060283 Rat 631268 Cia21 Collagen induced arthritis QTL 21 3.1 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 14487011 104060283 Rat 9590268 Scort13 Serum corticosterone level QTL 13 3.26 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 10 11474010 56474010 Rat 7207811 Bmd90 Bone mineral density QTL 90 5.2 femur size trait (VT:1000369) femoral neck cross-sectional area (CMO:0001697) 10 49444551 81709989 Rat 1576311 Pia26 Pristane induced arthritis QTL 26 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 31224026 75632053 Rat 631270 Cia23 Collagen induced arthritis QTL 23 3.9 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 40035094 104060283 Rat 7411614 Foco18 Food consumption QTL 18 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 10 44441699 89441699 Rat 631547 Bp87 Blood pressure QTL 87 4.5 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 47369470 92369470 Rat 61427 Cia16 Collagen induced arthritis QTL 16 3.2 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 6357896 96121100 Rat 6893342 Cm78 Cardiac mass QTL 78 0.1 0.88 heart mass (VT:0007028) heart weight to body weight ratio (CMO:0000074) 10 42876766 79813922 Rat 2292441 Bp308 Blood pressure QTL 308 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 27606468 72606468 Rat 2313055 Bw96 Body weight QTL 96 3.6 0.0001 body mass (VT:0001259) body weight (CMO:0000012) 10 19606483 64606483 Rat 631542 Bp82 Blood pressure QTL 82 6.8 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 26521957 98952741 Rat
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
35
55
91
90
59
25
59
6
196
83
35
37
54
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Ensembl Acc Id:
ENSRNOT00000056608 ⟹ ENSRNOP00000053447
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 10 55,507,519 - 55,528,171 (-) Ensembl Rnor_6.0 Ensembl 10 57,415,832 - 57,436,368 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000094845 ⟹ ENSRNOP00000087998
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 10 55,507,519 - 55,514,870 (-) Ensembl
RefSeq Acc Id:
NM_001398998 ⟹ NP_001385927
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 10 56,006,243 - 56,026,357 (-) NCBI mRatBN7.2 10 55,507,646 - 55,527,764 (-) NCBI
Ensembl Acc Id:
ENSRNOP00000053447 ⟸ ENSRNOT00000056608
Ensembl Acc Id:
ENSRNOP00000087998 ⟸ ENSRNOT00000094845
RefSeq Acc Id:
NP_001385927 ⟸ NM_001398998
- UniProtKB:
F1LYV1 (UniProtKB/TrEMBL), A6HGA1 (UniProtKB/TrEMBL)
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2013-05-24
Scimp
SLP adaptor and CSK interacting membrane protein
LOC687735
hypothetical protein LOC687735
Data merged from RGD:1597550
1643240 APPROVED
2011-12-06
Scimp
SLP adaptor and CSK interacting membrane protein
LOC691993
hypothetical protein LOC691993
Nomenclature updated to reflect human and mouse nomenclature
1299863 APPROVED
2006-11-20
LOC691993
hypothetical protein LOC691993
Symbol and Name status set to provisional
70820 PROVISIONAL
2006-11-20
LOC687735
hypothetical protein LOC687735
Symbol and Name status set to provisional
70820 PROVISIONAL
