Nkain3 (Sodium/potassium transporting ATPase interacting 3) - Rat Genome Database

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Gene: Nkain3 (Sodium/potassium transporting ATPase interacting 3) Rattus norvegicus
Analyze
Symbol: Nkain3
Name: Sodium/potassium transporting ATPase interacting 3
RGD ID: 1591051
Description: Predicted to be involved in regulation of sodium ion transport. Predicted to be located in membrane. Orthologous to human NKAIN3 (sodium/potassium transporting ATPase interacting 3); INTERACTS WITH (S)-nicotine; 17beta-estradiol 3-benzoate; 2,2',4,4'-Tetrabromodiphenyl ether.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC689576; Na+/K+ transporting ATPase interacting 3; similar to CG9047-PA, isoform A; sodium/potassium-transporting ATPase subunit beta-1-interacting protein 3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8538,410,576 - 39,106,910 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl538,386,841 - 39,106,385 (-)EnsemblGRCr8
mRatBN7.2533,613,720 - 34,310,090 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl533,623,713 - 34,309,381 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx535,744,865 - 36,423,667 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0537,337,085 - 38,016,436 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0537,276,596 - 37,955,929 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0534,133,596 - 34,813,668 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl534,174,411 - 34,813,116 (-)Ensemblrn6Rnor6.0
Rnor_5.0538,786,929 - 39,465,621 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4534,764,661 - 35,477,296 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera532,699,788 - 33,363,832 (-)NCBICelera
Cytogenetic Map5q13-q21NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA,ISO)
plasma membrane  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:17606467  


Genomics

Comparative Map Data
Nkain3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8538,410,576 - 39,106,910 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl538,386,841 - 39,106,385 (-)EnsemblGRCr8
mRatBN7.2533,613,720 - 34,310,090 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl533,623,713 - 34,309,381 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx535,744,865 - 36,423,667 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0537,337,085 - 38,016,436 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0537,276,596 - 37,955,929 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0534,133,596 - 34,813,668 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl534,174,411 - 34,813,116 (-)Ensemblrn6Rnor6.0
Rnor_5.0538,786,929 - 39,465,621 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4534,764,661 - 35,477,296 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera532,699,788 - 33,363,832 (-)NCBICelera
Cytogenetic Map5q13-q21NCBI
NKAIN3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38862,248,854 - 62,999,652 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl862,248,591 - 63,014,000 (+)Ensemblhg38GRCh38
GRCh37863,161,413 - 63,912,211 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36863,324,055 - 64,066,182 (+)NCBIBuild 36Build 36hg18NCBI36
Celera859,151,524 - 59,893,831 (+)NCBICelera
Cytogenetic Map8q12.3NCBI
HuRef858,649,471 - 59,391,498 (+)NCBIHuRef
CHM1_1863,214,359 - 63,956,619 (+)NCBICHM1_1
T2T-CHM13v2.0862,672,922 - 63,424,229 (+)NCBIT2T-CHM13v2.0
Nkain3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39420,111,029 - 20,779,990 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl420,118,874 - 20,778,866 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38420,111,029 - 20,780,709 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl420,118,874 - 20,778,866 (-)Ensemblmm10GRCm38
MGSCv37420,170,994 - 20,705,815 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36420,334,682 - 20,869,503 (-)NCBIMGSCv36mm8
Celera419,993,374 - 20,525,440 (-)NCBICelera
Cytogenetic Map4A3NCBI
cM Map47.82NCBI
Nkain3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495544415,974,028 - 16,103,177 (-)NCBIChiLan1.0ChiLan1.0
NKAIN3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2777,971,652 - 78,711,151 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1853,611,463 - 54,364,925 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0858,774,416 - 59,532,321 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1860,455,259 - 61,206,749 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl860,455,390 - 61,197,361 (+)EnsemblpanPan2panpan1.1
NKAIN3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12912,503,313 - 13,117,787 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2912,503,407 - 13,120,451 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2912,825,352 - 13,445,464 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02912,603,297 - 13,220,465 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2912,603,379 - 13,223,136 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12912,613,301 - 13,231,837 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02912,731,334 - 13,348,658 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02913,000,427 - 13,614,794 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Nkain3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530363,673,482 - 64,261,655 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649610,535,300 - 11,111,525 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493649610,535,034 - 11,111,948 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NKAIN3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl471,069,144 - 71,608,429 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1471,040,646 - 71,608,499 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2477,334,136 - 77,666,248 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NKAIN3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1858,148,066 - 58,893,148 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603982,725,792 - 83,499,016 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nkain3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474428,829,789 - 29,508,784 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474428,827,355 - 29,508,869 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Nkain3
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11122,289,746 - 122,904,610 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Nkain3
5656 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:350
Count of miRNA genes:216
Interacting mature miRNAs:248
Transcripts:ENSRNOT00000017479
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2293666Bmd38Bone mineral density QTL 384.4femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)51373115343590997Rat
1578776Stresp18Stress response QTL 182.9thymus mass (VT:0004954)thymus wet weight (CMO:0000855)53275164977751649Rat
1298067Scl15Serum cholesterol level QTL 154.80.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)53801167083011670Rat
6907115Mcs29Mammary carcinoma susceptibility QTL 29mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)53800433183004331Rat
1358353Srcrtb2Stress Responsive Cort Basal QTL 23.480.003blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)52367149379046465Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)538207390136631402Rat
1300117Hrtrt8Heart rate QTL 83.49heart pumping trait (VT:2000009)heart rate (CMO:0000002)5862723052665523Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)51757663362576633Rat
1578774Tcas8Tongue tumor susceptibility QTL 83.47tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)51570745160707451Rat
1598807Glom12Glomerulus QTL 122.7kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)53801167083011670Rat
1302786Kidm8Kidney mass QTL 828.15kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)53801167083011670Rat
1331782Rf36Renal function QTL 363.296kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)539019942102105896Rat
6903292Stl28Serum triglyceride level QTL 282.60.0073blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)53331167378311673Rat
1578767Stresp17Stress response QTL 174.30.01blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)53275164977751649Rat
1549901Neudeg2Neurodegradation QTL 240nervous system integrity trait (VT:0010566)mononuclear cell count (CMO:0002119)53113042148841739Rat
1641922Alcrsp8Alcohol response QTL 8alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)51748608062486080Rat
2313085Bss59Bone structure and strength QTL 592.90.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)5862723053627230Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)5692228281330203Rat
6903306Scl35Serum cholesterol QTL 352.60.0073blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)53331167378311673Rat
7394712Emca13Estrogen-induced mammary cancer QTL 13mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)51460607859606078Rat
1331771Rf35Renal function QTL 354.36965kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)51001906491770353Rat
8662454Vetf3Vascular elastic tissue fragility QTL 327.4artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)5706553574335773Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)536460764136631402Rat
1641903Alcrsp3Alcohol response QTL 3response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)51748608062486080Rat
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)51001906487027358Rat
8552954Pigfal14Plasma insulin-like growth factor 1 level QTL 149blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)52602321171023211Rat
2303577Gluco47Glucose level QTL 473blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51652001961520019Rat
1600358Mamtr5Mammary tumor resistance QTL 5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)52367149368671493Rat

Markers in Region
D5Rat221  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8538,580,600 - 38,580,817 (+)Marker Load Pipeline
Rnor_6.0534,288,064 - 34,288,280NCBIRnor6.0
Rnor_5.0538,940,503 - 38,940,719UniSTSRnor5.0
RGSC_v3.4534,943,227 - 34,943,444RGDRGSC3.4
RGSC_v3.4534,943,228 - 34,943,444UniSTSRGSC3.4
Celera532,842,874 - 32,843,076UniSTS
RGSC_v3.1534,943,371 - 34,943,991RGD
SHRSP x BN Map520.4699RGD
SHRSP x BN Map520.4699UniSTS
Cytogenetic Map5q21UniSTS
D5Rat250  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8538,498,360 - 38,498,582 (+)Marker Load Pipeline
mRatBN7.2533,701,518 - 33,701,740 (+)MAPPERmRatBN7.2
Rnor_6.0534,208,395 - 34,208,616NCBIRnor6.0
Rnor_5.0538,861,710 - 38,861,931UniSTSRnor5.0
RGSC_v3.4534,858,528 - 34,858,749RGDRGSC3.4
RGSC_v3.4534,858,528 - 34,858,749UniSTSRGSC3.4
Celera532,769,397 - 32,769,630UniSTS
RGSC_v3.1534,858,707 - 34,858,928RGD
FHH x ACI Map518.7RGD
FHH x ACI Map518.7UniSTS
Cytogenetic Map5q21UniSTS
D5Mco25  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8538,674,842 - 38,675,159 (+)Marker Load Pipeline
mRatBN7.2533,878,004 - 33,878,321 (+)MAPPERmRatBN7.2
Rnor_6.0534,381,100 - 34,381,416NCBIRnor6.0
Rnor_5.0539,033,539 - 39,033,855UniSTSRnor5.0
RGSC_v3.4535,039,947 - 35,040,264RGDRGSC3.4
RGSC_v3.4535,039,948 - 35,040,264UniSTSRGSC3.4
Celera532,934,072 - 32,934,388UniSTS
RGSC_v3.1535,040,126 - 35,040,443RGD
Cytogenetic Map5q21UniSTS
D10Chm50  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8538,465,016 - 38,465,259 (+)Marker Load Pipeline
mRatBN7.2533,668,172 - 33,668,415 (+)MAPPERmRatBN7.2
Rnor_6.0534,176,696 - 34,176,938NCBIRnor6.0
Rnor_5.0538,830,011 - 38,830,253UniSTSRnor5.0
RGSC_v3.4534,822,055 - 34,822,297UniSTSRGSC3.4
Celera532,736,829 - 32,737,061UniSTS
Cytogenetic Map5q21UniSTS
D5Got216  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2534,091,196 - 34,091,337 (+)MAPPERmRatBN7.2
Rnor_6.0534,596,812 - 34,596,952NCBIRnor6.0
Rnor_5.0539,247,418 - 39,247,558UniSTSRnor5.0
RGSC_v3.4535,253,407 - 35,253,547UniSTSRGSC3.4
Celera533,145,884 - 33,146,034UniSTS
Cytogenetic Map5q21UniSTS
BF404564  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2533,973,890 - 33,974,005 (+)MAPPERmRatBN7.2
Rnor_6.0534,477,973 - 34,478,087NCBIRnor6.0
Rnor_5.0539,129,470 - 39,129,584UniSTSRnor5.0
RGSC_v3.4535,137,208 - 35,137,322UniSTSRGSC3.4
Celera533,028,719 - 33,028,833UniSTS
RH 3.4 Map5163.63UniSTS
Cytogenetic Map5q21UniSTS
RH139266  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2533,791,421 - 33,791,666 (+)MAPPERmRatBN7.2
Rnor_6.0534,295,729 - 34,295,973NCBIRnor6.0
Rnor_5.0538,948,168 - 38,948,412UniSTSRnor5.0
RGSC_v3.4534,950,893 - 34,951,137UniSTSRGSC3.4
Celera532,850,525 - 32,850,769UniSTS
RH 3.4 Map5165.4UniSTS
Cytogenetic Map5q21UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
11 33 143 49 48 24 10 24 6 148 69 8 116 44 84 24 15 15

Sequence


Ensembl Acc Id: ENSRNOT00000017479   ⟹   ENSRNOP00000017479
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl538,420,572 - 39,106,385 (-)Ensembl
mRatBN7.2 Ensembl533,623,713 - 34,309,381 (-)Ensembl
Rnor_6.0 Ensembl534,174,411 - 34,813,116 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000134449   ⟹   ENSRNOP00000105064
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl538,386,841 - 39,106,385 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000145239   ⟹   ENSRNOP00000109982
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl538,409,890 - 39,106,385 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000159293   ⟹   ENSRNOP00000111685
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl538,514,798 - 39,106,385 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000166915   ⟹   ENSRNOP00000099730
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl538,421,048 - 39,106,385 (-)Ensembl
RefSeq Acc Id: NM_001109540   ⟹   NP_001103010
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8538,420,572 - 39,106,738 (-)NCBI
mRatBN7.2533,623,713 - 34,309,914 (-)NCBI
Rnor_6.0534,133,596 - 34,813,668 (-)NCBI
Rnor_5.0538,786,929 - 39,465,621 (-)NCBI
RGSC_v3.4534,764,661 - 35,477,296 (-)RGD
Celera532,699,788 - 33,363,832 (-)RGD
Sequence:
RefSeq Acc Id: XM_039110792   ⟹   XP_038966720
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8538,410,576 - 39,106,910 (-)NCBI
mRatBN7.2533,613,720 - 34,310,090 (-)NCBI
RefSeq Acc Id: XM_063288441   ⟹   XP_063144511
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8538,586,582 - 39,106,909 (-)NCBI
RefSeq Acc Id: NP_001103010   ⟸   NM_001109540
- Peptide Label: precursor
- UniProtKB: F1LV86 (UniProtKB/TrEMBL),   A6IID7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000017479   ⟸   ENSRNOT00000017479
RefSeq Acc Id: XP_038966720   ⟸   XM_039110792
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063144511   ⟸   XM_063288441
- Peptide Label: isoform X2
Ensembl Acc Id: ENSRNOP00000111685   ⟸   ENSRNOT00000159293
Ensembl Acc Id: ENSRNOP00000109982   ⟸   ENSRNOT00000145239
Ensembl Acc Id: ENSRNOP00000099730   ⟸   ENSRNOT00000166915
Ensembl Acc Id: ENSRNOP00000105064   ⟸   ENSRNOT00000134449

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LV86-F1-model_v2 AlphaFold F1LV86 1-179 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1591051 AgrOrtholog
BioCyc Gene G2FUF-41830 BioCyc
Ensembl Genes ENSRNOG00000013085 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000017479 ENTREZGENE
  ENSRNOT00000017479.8 UniProtKB/TrEMBL
  ENSRNOT00000134449.1 UniProtKB/TrEMBL
  ENSRNOT00000145239.1 UniProtKB/TrEMBL
  ENSRNOT00000159293.1 UniProtKB/TrEMBL
  ENSRNOT00000166915 ENTREZGENE
  ENSRNOT00000166915.1 UniProtKB/TrEMBL
InterPro Na/K-Atpase_Interacting UniProtKB/TrEMBL
KEGG Report rno:689576 UniProtKB/TrEMBL
NCBI Gene 689576 ENTREZGENE
PANTHER PTHR13084 UniProtKB/TrEMBL
  SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA-1-INTERACTING PROTEIN 3 UniProtKB/TrEMBL
Pfam NKAIN UniProtKB/TrEMBL
PhenoGen Nkain3 PhenoGen
RatGTEx ENSRNOG00000013085 RatGTEx
UniProt A0ABK0L5H2_RAT UniProtKB/TrEMBL
  A0ABK0LAP7_RAT UniProtKB/TrEMBL
  A0ABK0LL56_RAT UniProtKB/TrEMBL
  A0ABK0LWM6_RAT UniProtKB/TrEMBL
  A6IID7 ENTREZGENE, UniProtKB/TrEMBL
  F1LV86 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-01-17 Nkain3  Sodium/potassium transporting ATPase interacting 3  Nkain3  Na+/K+ transporting ATPase interacting 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-06 Nkain3  Na+/K+ transporting ATPase interacting 3  LOC689576  similar to CG9047-PA, isoform A  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-01-09 LOC689576  similar to CG9047-PA, isoform A  LOC681715  similar to CG9047-PA, isoform A  Data merged from RGD:1591686 1643240 APPROVED
2006-11-20 LOC689576  similar to CG9047-PA, isoform A      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-20 LOC681715  similar to CG9047-PA, isoform A      Symbol and Name status set to provisional 70820 PROVISIONAL