Mlip (muscular LMNA-interacting protein) - Rat Genome Database

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Gene: Mlip (muscular LMNA-interacting protein) Rattus norvegicus
Analyze
Symbol: Mlip
Name: muscular LMNA-interacting protein
RGD ID: 1590513
Description: Predicted to enable lamin binding activity and transcription corepressor activity. Predicted to be involved in negative regulation of cardiac muscle hypertrophy in response to stress; negative regulation of transcription by RNA polymerase II; and positive regulation of transcription by RNA polymerase II. Predicted to be located in PML body; nuclear envelope; and sarcolemma. Orthologous to human MLIP (muscular LMNA interacting protein); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: CIP; LOC681849; LOC691933; similar to Protein C6orf142 homolog
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8886,815,491 - 87,085,117 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl886,814,798 - 87,082,408 (-)EnsemblGRCr8
mRatBN7.2877,935,087 - 78,204,725 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl877,935,079 - 78,204,254 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx883,419,251 - 83,575,810 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0881,695,893 - 81,852,440 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0879,518,592 - 79,675,147 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0884,409,957 - 84,634,637 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl884,434,784 - 84,632,817 (-)Ensemblrn6Rnor6.0
Rnor_5.0883,981,876 - 84,206,700 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4882,082,936 - 82,201,670 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera877,693,077 - 77,954,209 (-)NCBICelera
Cytogenetic Map8q24NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytosol  (IEA)
nuclear envelope  (IEA,ISO)
nuclear lumen  (IEA,ISO)
nucleus  (IEA,ISO,ISS)
PML body  (IEA,ISO)
sarcolemma  (IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:21498514   PMID:22343712   PMID:26359501   PMID:26436652   PMID:31505169   PMID:35352799  


Genomics

Comparative Map Data
Mlip
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8886,815,491 - 87,085,117 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl886,814,798 - 87,082,408 (-)EnsemblGRCr8
mRatBN7.2877,935,087 - 78,204,725 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl877,935,079 - 78,204,254 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx883,419,251 - 83,575,810 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0881,695,893 - 81,852,440 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0879,518,592 - 79,675,147 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0884,409,957 - 84,634,637 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl884,434,784 - 84,632,817 (-)Ensemblrn6Rnor6.0
Rnor_5.0883,981,876 - 84,206,700 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4882,082,936 - 82,201,670 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera877,693,077 - 77,954,209 (-)NCBICelera
Cytogenetic Map8q24NCBI
MLIP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38654,018,970 - 54,266,280 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl653,929,982 - 54,266,946 (+)Ensemblhg38GRCh38
GRCh37653,883,768 - 54,131,078 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36653,991,673 - 54,239,037 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34653,991,747 - 54,239,035NCBI
Celera655,545,893 - 55,793,289 (+)NCBICelera
Cytogenetic Map6p12.1NCBI
HuRef653,716,745 - 53,964,412 (+)NCBIHuRef
CHM1_1653,885,511 - 54,126,906 (+)NCBICHM1_1
T2T-CHM13v2.0653,858,907 - 54,106,381 (+)NCBIT2T-CHM13v2.0
Mlip
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39977,009,366 - 77,260,062 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl977,009,363 - 77,260,251 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38977,102,084 - 77,352,782 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl977,102,081 - 77,352,969 (-)Ensemblmm10GRCm38
MGSCv37976,949,891 - 77,195,677 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36976,889,909 - 77,035,661 (-)NCBIMGSCv36mm8
Celera974,274,590 - 74,527,305 (-)NCBICelera
Cytogenetic Map9DNCBI
cM Map942.67NCBI
Mlip
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554111,849,761 - 2,100,624 (-)Ensembl
ChiLan1.0NW_0049554111,852,895 - 2,100,617 (-)NCBIChiLan1.0ChiLan1.0
MLIP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2568,572,108 - 68,739,870 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1664,448,582 - 64,616,222 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0653,574,541 - 53,823,395 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1655,210,088 - 55,459,037 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl655,202,674 - 55,457,640 (+)EnsemblpanPan2panpan1.1
MLIP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11221,501,727 - 21,757,760 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1221,502,561 - 21,757,764 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1221,392,514 - 21,649,155 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01221,997,540 - 22,260,928 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1221,998,353 - 22,260,925 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11221,489,952 - 21,747,168 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01221,599,994 - 21,863,302 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01221,737,977 - 21,994,987 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Mlip
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494657,023,182 - 57,243,557 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364766,716,661 - 6,835,131 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364766,715,607 - 6,936,978 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MLIP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl726,561,359 - 26,793,724 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1726,562,802 - 26,801,817 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2731,068,707 - 31,236,064 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MLIP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11717,254,118 - 17,512,265 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1717,252,186 - 17,503,406 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605823,430,902 - 23,587,741 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mlip
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248501,296,435 - 1,606,630 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Mlip
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1871,381,022 - 71,580,085 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Mlip
1932 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:143
Count of miRNA genes:97
Interacting mature miRNAs:108
Transcripts:ENSRNOT00000064754, ENSRNOT00000067627
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)849849908118871671Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)880768445125768445Rat
1578769Uae31Urinary albumin excretion QTL 313.30.001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)839106363103375781Rat
1298079Activ2Activity QTL 29.50.000001voluntary movement trait (VT:0003491)rearing measurement (CMO:0001515)85076395195763951Rat
70161Bp62Blood pressure QTL 622.90.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)85158969999045312Rat
1578765Klgr1Kidney lesion grade QTL 13.30.0001kidney morphology trait (VT:0002135)organ lesion measurement (CMO:0000677)839106363103375781Rat
61464Niddm11Non-insulin dependent diabetes mellitus QTL 113.10.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)84447792689477926Rat
4889938Bss89Bone structure and strength QTL 893.8tibia size trait (VT:0100001)tibia cortical bone volume (CMO:0001725)85899169791341052Rat
1578755Pur5Proteinuria QTL 53.30.0001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)839106258103375958Rat
631210Bw3Body weight QTL35.9mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)861019838121662124Rat
2313088Bss75Bone structure and strength QTL 753.10.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)83910625891341052Rat
8662823Vetf5Vascular elastic tissue fragility QTL 51.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)863404444108404444Rat
1358896Bp262Blood pressure QTL 2622.89arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)835464071107982864Rat
731182Uae24Urinary albumin excretion QTL 246.4urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)84754141992541419Rat
8694446Bw170Body weight QTL 17012.070.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)880768445125768445Rat
1331769Rf39Renal function QTL 393.871urine output (VT:0003620)timed urine volume (CMO:0000260)850763951107970527Rat
1358906Bp253Blood pressure QTL 25340.0004arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)84961020494610204Rat
61358Bp39Blood pressure QTL 392arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)84444783789447837Rat
10450865Bw175Body weight QTL 1754.1total fat pad mass (VT:0015008)adipose tissue molecular composition measurement (CMO:0000484)884192326129192326Rat
1358907Cm40Cardiac mass QTL 401.89heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)835464071107982864Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)855428333127966348Rat
2316950Scl66Serum cholesterol level QTL 664.1blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)839106363114525825Rat
1582254Kidm31Kidney mass QTL 313kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)84924517894245178Rat
2300181Bmd55Bone mineral density QTL 555.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)885348065130348065Rat
724540Uae8Urinary albumin excretion QTL 85urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)839106258103375958Rat
10402857Bp380Blood pressure QTL 3800.95arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)862848139107848139Rat
1358892Kidm26Kidney mass QTL 263.69kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)835464071107982864Rat
1582243Bw66Body weight QTL 663.40.0048body mass (VT:0001259)body weight (CMO:0000012)84924517894245178Rat
5684973Bss100Bone structure and strength QTL 1004.7tibia area (VT:1000281)tibia area measurement (CMO:0001382)85899169791341052Rat
8694200Abfw4Abdominal fat weight QTL 49.070.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)880768445125768445Rat
61373Mcs4Mammary carcinoma susceptibility QTL 41.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)84447504389475043Rat
1300177Cm2Cardiac mass QTL 23.65heart mass (VT:0007028)heart weight (CMO:0000017)863141536109261840Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)882352698127352698Rat
2313057Bss76Bone structure and strength QTL 7630.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)83910625891341052Rat
12879878Bw183Body weight QTL 1830.001body mass (VT:0001259)body weight (CMO:0000012)862848139107848139Rat
1549908Neudeg1Neurodegradation QTL 15.50nervous system integrity trait (VT:0010566)logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count (CMO:0001986)858337123103337123Rat
12879879Cm99Cardiac mass QTL 990.001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)862848139107848139Rat
1331804Cm30Cardiac mass QTL 303.77443heart mass (VT:0007028)heart wet weight (CMO:0000069)862970527107970527Rat
2313067Bss77Bone structure and strength QTL 773.10.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)83910625891341052Rat
12879880Cm100Cardiac mass QTL 1000.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)862848139107848139Rat
12879881Cm101Cardiac mass QTL 1010.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)862848139107848139Rat
12879882Am8Aortic mass QTL 80.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)862848139107848139Rat
12879883Kidm65Kidney mass QTL 650.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)862848139107848139Rat
71120Niddm21Non-insulin dependent diabetes mellitus QTL 213.73blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)866992095111992095Rat
1358912Bw51Body weight QTL 512.95body mass (VT:0001259)body weight (CMO:0000012)860248093105248093Rat
634332Pia18Pristane induced arthritis QTL 184joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)884192326132782436Rat
1300171Bp184Blood pressure QTL 1843.66arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)879394435132782436Rat
2313086Bss60Bone structure and strength QTL 604.10.0001tibia length (VT:0004357)tibia length (CMO:0000450)85899169791341052Rat
2293697Bmd39Bone mineral density QTL 39femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)862848139107848139Rat
1331837Bw23Body weight QTL 234.190.00007body mass (VT:0001259)body weight (CMO:0000012)855428416107963099Rat
1331838Niddm61Non-insulin dependent diabetes mellitus QTL 613.530.0004blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)862963099107963099Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)870041301121080908Rat
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)868690349119799881Rat
2313046Bss78Bone structure and strength QTL 783.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)83910625891341052Rat
631664Hcar3Hepatocarcinoma resistance QTL 32.90.0005liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)862982864107982864Rat
2301402Bp316Blood pressure QTL 3160.005arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)862848139107848139Rat
8694392Bw161Body weight QTL 1618.060.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)880768445125768445Rat

Markers in Region
D8Rat24  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8887,018,553 - 87,018,707 (+)Marker Load Pipeline
mRatBN7.2878,138,158 - 78,138,314 (+)MAPPERmRatBN7.2
Rnor_6.0884,569,165 - 84,569,318NCBIRnor6.0
Rnor_5.0884,140,683 - 84,140,836UniSTSRnor5.0
RGSC_v3.4882,246,890 - 82,247,243RGDRGSC3.4
RGSC_v3.4882,247,051 - 82,247,204UniSTSRGSC3.4
Celera877,890,637 - 77,890,790UniSTS
RGSC_v3.1882,266,105 - 82,266,258RGD
RH 3.4 Map8897.39UniSTS
RH 3.4 Map8897.39RGD
RH 2.0 Map8767.5RGD
SHRSP x BN Map845.61RGD
Cytogenetic Map8q24-q31UniSTS
D9Mit319  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2878,138,147 - 78,138,287 (+)MAPPERmRatBN7.2
Rnor_6.0884,569,154 - 84,569,291NCBIRnor6.0
Rnor_5.0884,140,672 - 84,140,809UniSTSRnor5.0
RGSC_v3.4882,247,040 - 82,247,177UniSTSRGSC3.4
Celera877,890,626 - 77,890,763UniSTS
Cytogenetic Map8q24-q31UniSTS
AI713303  
Rat AssemblyChrPosition (strand)SourceJBrowse
RH 3.4 Map8924.89UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
15 12 66 133 61 60 29 25 29 6 223 124 11 112 47 86 31 14 14

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001399373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008757820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008757821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008766417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008766418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008766420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017596097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC092625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000064754   ⟹   ENSRNOP00000061707
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl886,815,483 - 87,082,130 (-)Ensembl
mRatBN7.2 Ensembl877,935,079 - 78,201,739 (-)Ensembl
Rnor_6.0 Ensembl884,434,784 - 84,506,328 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000076213   ⟹   ENSRNOP00000068241
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl886,815,491 - 86,971,873 (-)Ensembl
mRatBN7.2 Ensembl877,935,089 - 78,091,472 (-)Ensembl
Rnor_6.0 Ensembl884,434,784 - 84,522,588 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000076942   ⟹   ENSRNOP00000068377
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl886,829,868 - 86,964,342 (-)Ensembl
mRatBN7.2 Ensembl878,001,046 - 78,201,739 (-)Ensembl
Rnor_6.0 Ensembl884,434,784 - 84,632,817 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000101165   ⟹   ENSRNOP00000088810
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl886,814,798 - 86,972,066 (-)Ensembl
mRatBN7.2 Ensembl877,935,079 - 78,091,593 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000105297   ⟹   ENSRNOP00000097271
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl886,815,799 - 86,972,066 (-)Ensembl
mRatBN7.2 Ensembl877,935,395 - 78,091,593 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000110692   ⟹   ENSRNOP00000078605
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl886,815,799 - 87,082,032 (-)Ensembl
mRatBN7.2 Ensembl877,935,395 - 78,204,073 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000113615   ⟹   ENSRNOP00000095106
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl886,815,483 - 87,082,130 (-)Ensembl
mRatBN7.2 Ensembl877,935,089 - 78,091,472 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000117285   ⟹   ENSRNOP00000080719
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl886,815,483 - 87,082,408 (-)Ensembl
mRatBN7.2 Ensembl877,935,079 - 78,204,073 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000120266   ⟹   ENSRNOP00000076453
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl886,855,201 - 87,082,401 (-)Ensembl
mRatBN7.2 Ensembl877,935,079 - 78,204,254 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000143920   ⟹   ENSRNOP00000099958
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl886,814,798 - 86,972,193 (-)Ensembl
RefSeq Acc Id: NM_001399373   ⟹   NP_001386302
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 86,971,873 (-)NCBI
mRatBN7.2877,935,087 - 78,091,475 (-)NCBI
RefSeq Acc Id: XM_039082514   ⟹   XP_038938442
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 87,085,117 (-)NCBI
mRatBN7.2877,935,087 - 78,204,725 (-)NCBI
RefSeq Acc Id: XM_039082515   ⟹   XP_038938443
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 87,085,117 (-)NCBI
mRatBN7.2877,935,087 - 78,204,725 (-)NCBI
RefSeq Acc Id: XM_039082516   ⟹   XP_038938444
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 86,981,667 (-)NCBI
mRatBN7.2877,935,087 - 78,101,288 (-)NCBI
RefSeq Acc Id: XM_039082517   ⟹   XP_038938445
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 86,981,671 (-)NCBI
mRatBN7.2877,935,087 - 78,101,290 (-)NCBI
RefSeq Acc Id: XM_039082518   ⟹   XP_038938446
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 86,981,661 (-)NCBI
mRatBN7.2877,935,087 - 78,101,285 (-)NCBI
RefSeq Acc Id: XM_039082519   ⟹   XP_038938447
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 86,981,664 (-)NCBI
mRatBN7.2877,935,087 - 78,101,287 (-)NCBI
RefSeq Acc Id: XM_039082520   ⟹   XP_038938448
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 86,981,666 (-)NCBI
mRatBN7.2877,935,087 - 78,101,288 (-)NCBI
RefSeq Acc Id: XM_039082521   ⟹   XP_038938449
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 86,981,665 (-)NCBI
mRatBN7.2877,935,087 - 78,101,287 (-)NCBI
RefSeq Acc Id: XM_039082522   ⟹   XP_038938450
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 86,981,664 (-)NCBI
mRatBN7.2877,935,087 - 78,101,287 (-)NCBI
RefSeq Acc Id: XM_039082523   ⟹   XP_038938451
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 86,971,873 (-)NCBI
mRatBN7.2877,935,087 - 78,091,475 (-)NCBI
RefSeq Acc Id: XM_039082524   ⟹   XP_038938452
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 86,981,664 (-)NCBI
mRatBN7.2877,935,087 - 78,101,286 (-)NCBI
RefSeq Acc Id: XM_039082525   ⟹   XP_038938453
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 86,981,662 (-)NCBI
mRatBN7.2877,935,087 - 78,101,285 (-)NCBI
RefSeq Acc Id: XM_039082527   ⟹   XP_038938455
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 86,971,873 (-)NCBI
mRatBN7.2877,935,087 - 78,091,475 (-)NCBI
RefSeq Acc Id: XM_039082528   ⟹   XP_038938456
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 86,981,628 (-)NCBI
mRatBN7.2877,935,087 - 78,101,258 (-)NCBI
RefSeq Acc Id: XM_039082529   ⟹   XP_038938457
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 86,971,873 (-)NCBI
mRatBN7.2877,935,087 - 78,091,475 (-)NCBI
RefSeq Acc Id: XM_063266132   ⟹   XP_063122202
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 87,075,313 (-)NCBI
RefSeq Acc Id: XM_063266133   ⟹   XP_063122203
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 86,981,647 (-)NCBI
RefSeq Acc Id: XM_063266134   ⟹   XP_063122204
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 87,083,962 (-)NCBI
RefSeq Acc Id: XM_063266135   ⟹   XP_063122205
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 87,083,962 (-)NCBI
RefSeq Acc Id: XM_063266136   ⟹   XP_063122206
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 87,083,962 (-)NCBI
RefSeq Acc Id: XM_063266137   ⟹   XP_063122207
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8886,815,491 - 87,083,962 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001386302 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938442 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938443 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938444 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938445 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938446 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938447 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938448 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938449 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938450 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938451 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938452 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938453 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938455 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938456 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938457 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122202 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122203 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122204 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122205 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122206 (Get FASTA)   NCBI Sequence Viewer  
  XP_063122207 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein A0A096MK47 (Get FASTA)   NCBI Sequence Viewer  
  AAH92625 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000061707.4
  ENSRNOP00000068241
  ENSRNOP00000076453
  ENSRNOP00000080719
  ENSRNOP00000095106
  ENSRNOP00000097271
  ENSRNOP00000097271.1
  ENSRNOP00000099958
Ensembl Acc Id: ENSRNOP00000068377   ⟸   ENSRNOT00000076942
Ensembl Acc Id: ENSRNOP00000068241   ⟸   ENSRNOT00000076213
Ensembl Acc Id: ENSRNOP00000061707   ⟸   ENSRNOT00000064754
RefSeq Acc Id: XP_038938443   ⟸   XM_039082515
- Peptide Label: isoform X1
- UniProtKB: Q569A0 (UniProtKB/Swiss-Prot),   D4A3C4 (UniProtKB/Swiss-Prot),   A0A8I6ARD4 (UniProtKB/Swiss-Prot),   A0A096MK47 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038938442   ⟸   XM_039082514
- Peptide Label: isoform X1
- UniProtKB: Q569A0 (UniProtKB/Swiss-Prot),   D4A3C4 (UniProtKB/Swiss-Prot),   A0A8I6ARD4 (UniProtKB/Swiss-Prot),   A0A096MK47 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038938445   ⟸   XM_039082517
- Peptide Label: isoform X3
- UniProtKB: Q569A0 (UniProtKB/Swiss-Prot),   D4A3C4 (UniProtKB/Swiss-Prot),   A0A8I6ARD4 (UniProtKB/Swiss-Prot),   A0A096MK47 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038938448   ⟸   XM_039082520
- Peptide Label: isoform X6
- UniProtKB: Q569A0 (UniProtKB/Swiss-Prot),   D4A3C4 (UniProtKB/Swiss-Prot),   A0A8I6ARD4 (UniProtKB/Swiss-Prot),   A0A096MK47 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038938444   ⟸   XM_039082516
- Peptide Label: isoform X2
- UniProtKB: Q569A0 (UniProtKB/Swiss-Prot),   D4A3C4 (UniProtKB/Swiss-Prot),   A0A8I6ARD4 (UniProtKB/Swiss-Prot),   A0A096MK47 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038938447   ⟸   XM_039082519
- Peptide Label: isoform X6
- UniProtKB: Q569A0 (UniProtKB/Swiss-Prot),   D4A3C4 (UniProtKB/Swiss-Prot),   A0A8I6ARD4 (UniProtKB/Swiss-Prot),   A0A096MK47 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038938450   ⟸   XM_039082522
- Peptide Label: isoform X8
- UniProtKB: Q569A0 (UniProtKB/Swiss-Prot),   D4A3C4 (UniProtKB/Swiss-Prot),   A0A8I6ARD4 (UniProtKB/Swiss-Prot),   A0A096MK47 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038938449   ⟸   XM_039082521
- Peptide Label: isoform X5
- UniProtKB: Q569A0 (UniProtKB/Swiss-Prot),   D4A3C4 (UniProtKB/Swiss-Prot),   A0A8I6ARD4 (UniProtKB/Swiss-Prot),   A0A096MK47 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038938452   ⟸   XM_039082524
- Peptide Label: isoform X9
- UniProtKB: Q569A0 (UniProtKB/Swiss-Prot),   D4A3C4 (UniProtKB/Swiss-Prot),   A0A8I6ARD4 (UniProtKB/Swiss-Prot),   A0A096MK47 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038938453   ⟸   XM_039082525
- Peptide Label: isoform X10
- UniProtKB: Q569A0 (UniProtKB/Swiss-Prot),   D4A3C4 (UniProtKB/Swiss-Prot),   A0A8I6ARD4 (UniProtKB/Swiss-Prot),   A0A096MK47 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038938446   ⟸   XM_039082518
- Peptide Label: isoform X4
- UniProtKB: Q569A0 (UniProtKB/Swiss-Prot),   D4A3C4 (UniProtKB/Swiss-Prot),   A0A8I6ARD4 (UniProtKB/Swiss-Prot),   A0A096MK47 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038938456   ⟸   XM_039082528
- Peptide Label: isoform X14
RefSeq Acc Id: XP_038938455   ⟸   XM_039082527
- Peptide Label: isoform X12
- UniProtKB: Q569A0 (UniProtKB/Swiss-Prot),   D4A3C4 (UniProtKB/Swiss-Prot),   A0A8I6ARD4 (UniProtKB/Swiss-Prot),   A0A096MK47 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038938457   ⟸   XM_039082529
- Peptide Label: isoform X16
RefSeq Acc Id: XP_038938451   ⟸   XM_039082523
- Peptide Label: isoform X7
- UniProtKB: Q569A0 (UniProtKB/Swiss-Prot),   D4A3C4 (UniProtKB/Swiss-Prot),   A0A8I6ARD4 (UniProtKB/Swiss-Prot),   A0A096MK47 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSRNOP00000080719   ⟸   ENSRNOT00000117285
Ensembl Acc Id: ENSRNOP00000088810   ⟸   ENSRNOT00000101165
Ensembl Acc Id: ENSRNOP00000095106   ⟸   ENSRNOT00000113615
Ensembl Acc Id: ENSRNOP00000097271   ⟸   ENSRNOT00000105297
Ensembl Acc Id: ENSRNOP00000076453   ⟸   ENSRNOT00000120266
Ensembl Acc Id: ENSRNOP00000078605   ⟸   ENSRNOT00000110692
RefSeq Acc Id: NP_001386302   ⟸   NM_001399373
- UniProtKB: A0A096MJS3 (UniProtKB/TrEMBL),   A0A8I6AMD7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063122207   ⟸   XM_063266137
- Peptide Label: isoform X18
RefSeq Acc Id: XP_063122205   ⟸   XM_063266135
- Peptide Label: isoform X15
RefSeq Acc Id: XP_063122206   ⟸   XM_063266136
- Peptide Label: isoform X17
- UniProtKB: A0A8I5ZRC1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063122204   ⟸   XM_063266134
- Peptide Label: isoform X13
RefSeq Acc Id: XP_063122202   ⟸   XM_063266132
- Peptide Label: isoform X6
- UniProtKB: Q569A0 (UniProtKB/Swiss-Prot),   D4A3C4 (UniProtKB/Swiss-Prot),   A0A8I6ARD4 (UniProtKB/Swiss-Prot),   A0A096MK47 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063122203   ⟸   XM_063266133
- Peptide Label: isoform X11
- UniProtKB: A0A096MJS3 (UniProtKB/TrEMBL),   A0A8I6AMD7 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000099958   ⟸   ENSRNOT00000143920

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A096MK47-F1-model_v2 AlphaFold A0A096MK47 1-807 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696142
Promoter ID:EPDNEW_R6660
Type:multiple initiation site
Name:Mlip_1
Description:muscular LMNA-interacting protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0884,632,810 - 84,632,870EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1590513 AgrOrtholog
BioCyc Gene G2FUF-29794 BioCyc
Ensembl Genes ENSRNOG00000005934 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000064754.4 UniProtKB/Swiss-Prot
  ENSRNOT00000076213 ENTREZGENE
  ENSRNOT00000105297 ENTREZGENE
  ENSRNOT00000105297.1 UniProtKB/Swiss-Prot
  ENSRNOT00000113615 ENTREZGENE
  ENSRNOT00000117285 ENTREZGENE
  ENSRNOT00000120266 ENTREZGENE
  ENSRNOT00000143920 ENTREZGENE
IMAGE_CLONE IMAGE:7314232 IMAGE-MGC_LOAD
InterPro MLIP UniProtKB/Swiss-Prot
MGC_CLONE MGC:109316 IMAGE-MGC_LOAD
NCBI Gene 681849 ENTREZGENE
PANTHER MUSCULAR LMNA-INTERACTING PROTEIN UniProtKB/Swiss-Prot
  PTHR31514 UniProtKB/Swiss-Prot
Pfam MLIP UniProtKB/Swiss-Prot
PhenoGen Mlip PhenoGen
RatGTEx ENSRNOG00000005934 RatGTEx
UniProt A0A096MJS3 ENTREZGENE, UniProtKB/TrEMBL
  A0A096MK47 ENTREZGENE
  A0A5H1ZRU6_RAT UniProtKB/TrEMBL
  A0A8I5Y544_RAT UniProtKB/TrEMBL
  A0A8I5ZL83_RAT UniProtKB/TrEMBL
  A0A8I5ZRC1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A8U5_RAT UniProtKB/TrEMBL
  A0A8I6AMD7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ARD4 ENTREZGENE
  A0A8L2UP94_RAT UniProtKB/TrEMBL
  A0ABK0L5P3_RAT UniProtKB/TrEMBL
  D4A3C4 ENTREZGENE
  MLIP_RAT UniProtKB/Swiss-Prot
  Q569A0 ENTREZGENE
UniProt Secondary A0A8I6ARD4 UniProtKB/Swiss-Prot
  D4A3C4 UniProtKB/Swiss-Prot
  Q569A0 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-07-29 Mlip  muscular LMNA-interacting protein  LOC691933  similar to Protein C6orf142 homolog  Data merged from RGD:1593349 737654 PROVISIONAL
2013-08-09 Mlip  muscular LMNA-interacting protein  LOC681849  similar to Protein C6orf142 homolog  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-20 LOC691933  similar to Protein C6orf142 homolog      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-20 LOC681849  similar to Protein C6orf142 homolog      Symbol and Name status set to provisional 70820 PROVISIONAL