Slc25a18 (solute carrier family 25 member 18) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Slc25a18 (solute carrier family 25 member 18) Rattus norvegicus
Analyze
Symbol: Slc25a18
Name: solute carrier family 25 member 18
RGD ID: 1590470
Description: Predicted to enable L-aspartate transmembrane transporter activity; L-glutamate transmembrane transporter activity; and amino acid:proton symporter activity. Predicted to be involved in L-glutamate transmembrane transport; aspartate transmembrane transport; and malate-aspartate shuttle. Located in mitochondrial inner membrane. Orthologous to human SLC25A18 (solute carrier family 25 member 18); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; atrazine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: GC-2; glutamate carrier 2, mitochondrial; glutamate/H(+) symporter 2; MGC105602; mitochondrial glutamate carrier 2; solute carrier family 25 (glutamate carrier), member 18; solute carrier family 25 (mitochondrial carrier), member 18
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84155,672,939 - 155,693,549 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl4155,673,169 - 155,693,548 (+)EnsemblGRCr8
mRatBN7.24154,000,808 - 154,021,373 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4154,000,990 - 154,021,372 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx4160,266,348 - 160,286,759 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04156,050,085 - 156,070,496 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04154,673,411 - 154,693,816 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.04153,330,069 - 153,350,447 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4153,330,069 - 153,350,446 (+)Ensemblrn6Rnor6.0
Rnor_5.04220,420,213 - 220,440,659 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.44157,182,532 - 157,202,851 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera4142,842,157 - 142,862,546 (+)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Mitochondrial glutamate carrier GC1 as a newly identified player in the control of glucose-stimulated insulin secretion. Casimir M, etal., J Biol Chem. 2009 Sep 11;284(37):25004-14. doi: 10.1074/jbc.M109.015495. Epub 2009 Jul 7.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:12477932   PMID:12865426   PMID:15489334   PMID:29476059   PMID:34800366  


Genomics

Comparative Map Data
Slc25a18
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84155,672,939 - 155,693,549 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl4155,673,169 - 155,693,548 (+)EnsemblGRCr8
mRatBN7.24154,000,808 - 154,021,373 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4154,000,990 - 154,021,372 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx4160,266,348 - 160,286,759 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04156,050,085 - 156,070,496 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04154,673,411 - 154,693,816 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.04153,330,069 - 153,350,447 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4153,330,069 - 153,350,446 (+)Ensemblrn6Rnor6.0
Rnor_5.04220,420,213 - 220,440,659 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.44157,182,532 - 157,202,851 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera4142,842,157 - 142,862,546 (+)NCBICelera
Cytogenetic Map4q42NCBI
SLC25A18
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382217,563,498 - 17,590,995 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2217,563,086 - 17,591,909 (+)Ensemblhg38GRCh38
GRCh372218,043,198 - 18,073,761 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362216,423,183 - 16,453,647 (+)NCBIBuild 36Build 36hg18NCBI36
Build 342216,417,736 - 16,448,201NCBI
Celera221,665,610 - 1,693,397 (+)NCBICelera
Cytogenetic Map22q11.21NCBI
HuRef221,861,604 - 1,888,972 (+)NCBIHuRef
CHM1_12218,042,781 - 18,073,196 (+)NCBICHM1_1
T2T-CHM13v2.02218,231,243 - 18,258,739 (+)NCBIT2T-CHM13v2.0
Slc25a18
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396120,750,527 - 120,771,297 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6120,750,539 - 120,771,297 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm386120,773,504 - 120,794,169 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6120,773,578 - 120,794,336 (+)Ensemblmm10GRCm38
MGSCv376120,723,786 - 120,744,000 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv366120,739,197 - 120,759,955 (+)NCBIMGSCv36mm8
Celera6122,615,935 - 122,636,146 (+)NCBICelera
Cytogenetic Map6F1NCBI
cM Map657.0NCBI
Slc25a18
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554545,648,255 - 5,668,754 (+)Ensembl
ChiLan1.0NW_0049554545,648,255 - 5,668,754 (+)NCBIChiLan1.0ChiLan1.0
SLC25A18
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22327,878,412 - 27,909,146 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12230,428,544 - 30,456,670 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v022991,375 - 1,021,760 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12216,420,684 - 16,451,086 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2216,420,689 - 16,451,086 (+)EnsemblpanPan2panpan1.1
SLC25A18
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12745,196,172 - 45,221,751 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2745,196,670 - 45,221,297 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha271,461,648 - 1,486,890 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02745,565,890 - 45,591,367 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2745,566,158 - 45,590,915 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12745,494,553 - 45,519,813 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02745,467,890 - 45,493,101 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.027815,662 - 841,103 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Slc25a18
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945110,376,698 - 110,397,909 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936807561,004 - 568,639 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936807553,353 - 570,093 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A18
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl191,786,980 - 1,806,056 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Slc25a18
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247359,724,167 - 9,739,169 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247359,727,342 - 9,745,832 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Slc25a18
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1625,947,206 - 25,967,454 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Slc25a18
100 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:315
Count of miRNA genes:197
Interacting mature miRNAs:224
Transcripts:ENSRNOT00000015560
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4146370897184426481Rat
724558Plsm2Polydactyly-luxate syndrome (PLS) morphotypes QTL 20.0003hindlimb integrity trait (VT:0010563)hind foot phalanges count (CMO:0001949)4134095016179095016Rat
1582237Kidm34Kidney mass QTL 3440.0001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)4149763204169799698Rat
61446Coreg2Compensatory renal growth QTL 23.5kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)4150095743159267220Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4146370897184426481Rat
1358364Sradr4Stress Responsive Adrenal Weight QTL 44.92adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)4131384565176384565Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)427730518170099664Rat
6478763Anxrr46Anxiety related response QTL 460.07428locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4112427331157427331Rat
6478760Anxrr45Anxiety related response QTL 450.06717locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4112427331157427331Rat
61451Ciaa4CIA Autoantibody QTL 43.1blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)4123870974168870974Rat
1331802Srn5Serum renin concentration QTL 53.045renin activity (VT:0005581)plasma renin activity level (CMO:0000116)4117559384162559384Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4140059299181024663Rat
6478700Anxrr33Anxiety related response QTL 330.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat
1298524Oia8Oil induced arthritis QTL 8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4140059299184426481Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)460916264184426481Rat
7207480Bss105Bone structure and strength QTL 1058.1femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)4111383604156383604Rat
634335Anxrr16Anxiety related response QTL 167.22locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)494638356168870820Rat
737821Hcar9Hepatocarcinoma resistance QTL 93.7liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)4106848959168870974Rat
7411558Bw133Body weight QTL 13313.840.001body mass (VT:0001259)body weight gain (CMO:0000420)4127263297172263297Rat
6478778Anxrr51Anxiety related response QTL 510.25384locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4126334185171334185Rat
10401796Kidm48Kidney mass QTL 48kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)4147299608184426481Rat
6478718Anxrr34Anxiety related response QTL 340.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat
631511Pia7Pristane induced arthritis QTL 74.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4123870974168870974Rat
1549832Bss3Bone structure and strength QTL 311femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)4111383604156383604Rat
634347Hcar8Hepatocarcinoma resistance QTL 85.8liver integrity trait (VT:0010547)liver tumorous lesion area to total liver area ratio (CMO:0001075)4124700988169700988Rat
738031Alc14Alcohol consumption QTL 147.60.00003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)460916264174095838Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)4100752691179366077Rat
1581566Eae21Experimental allergic encephalomyelitis QTL 216.2body mass (VT:0001259)maximum body weight loss to initial body weight ratio (CMO:0001400)4137447185182447185Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)445429709157555683Rat
1578674Bmd12Bone mineral density QTL 123.8femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)4137430611182430611Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)460916264184426481Rat
1358202Gluco11Glucose level QTL 112.40.02adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)486709649168870974Rat
61422Cia13Collagen induced arthritis QTL 134.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4134199006168870974Rat
634342Cia24Collagen induced arthritis QTL 244.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4148121375176967367Rat
737978Pia23Pristane induced arthritis QTL 235.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4123870974168870974Rat
61362Oia2Oil induced arthritis QTL 20.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4140059299184426481Rat
631674Iddm14Insulin dependent diabetes mellitus QTL 14blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)465495851159259805Rat
12798519Anxrr54Anxiety related response QTL 542.540.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4116184844161184844Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)412212457182430611Rat
6478748Anxrr42Anxiety related response QTL 420.28008locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat
12798525Anxrr57Anxiety related response QTL 573.210.05locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4148834094168870974Rat

Markers in Region
BF386835  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24154,006,116 - 154,006,296 (+)MAPPERmRatBN7.2
Rnor_6.04153,335,196 - 153,335,375NCBIRnor6.0
Rnor_5.04220,425,340 - 220,425,519UniSTSRnor5.0
RGSC_v3.44157,187,604 - 157,187,783UniSTSRGSC3.4
Celera4142,847,300 - 142,847,479UniSTS
RH 3.4 Map4993.91UniSTS
Cytogenetic Map4q42UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
7 11 48 154 80 79 48 76 48 6 268 153 6 136 52 71 31 11 11

Sequence


Ensembl Acc Id: ENSRNOT00000015560   ⟹   ENSRNOP00000015561
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl4155,673,169 - 155,693,548 (+)Ensembl
mRatBN7.2 Ensembl4154,000,990 - 154,021,372 (+)Ensembl
Rnor_6.0 Ensembl4153,330,069 - 153,350,446 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000113398   ⟹   ENSRNOP00000081133
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl4155,684,291 - 155,693,548 (+)Ensembl
mRatBN7.2 Ensembl4154,012,112 - 154,021,372 (+)Ensembl
RefSeq Acc Id: NM_001044280   ⟹   NP_001037745
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84155,673,169 - 155,693,549 (+)NCBI
mRatBN7.24154,000,990 - 154,021,373 (+)NCBI
Rnor_6.04153,330,069 - 153,350,447 (+)NCBI
Rnor_5.04220,420,213 - 220,440,659 (+)NCBI
RGSC_v3.44157,182,532 - 157,202,851 (+)RGD
Celera4142,842,157 - 142,862,546 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039108347   ⟹   XP_038964275
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84155,682,881 - 155,693,549 (+)NCBI
mRatBN7.24154,010,702 - 154,021,373 (+)NCBI
RefSeq Acc Id: XM_039108348   ⟹   XP_038964276
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84155,672,990 - 155,693,549 (+)NCBI
mRatBN7.24154,000,808 - 154,021,373 (+)NCBI
RefSeq Acc Id: XM_063286684   ⟹   XP_063142754
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84155,673,472 - 155,693,549 (+)NCBI
RefSeq Acc Id: XM_063286685   ⟹   XP_063142755
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84155,682,929 - 155,693,549 (+)NCBI
RefSeq Acc Id: XM_063286686   ⟹   XP_063142756
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84155,684,752 - 155,693,549 (+)NCBI
RefSeq Acc Id: XR_010065706
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84155,672,939 - 155,692,249 (+)NCBI
RefSeq Acc Id: NP_001037745   ⟸   NM_001044280
- UniProtKB: Q505J6 (UniProtKB/Swiss-Prot),   A6ILB0 (UniProtKB/TrEMBL),   A0A8I5ZRK2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000015561   ⟸   ENSRNOT00000015560
RefSeq Acc Id: XP_038964276   ⟸   XM_039108348
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038964275   ⟸   XM_039108347
- Peptide Label: isoform X2
- UniProtKB: A0A8I5ZRK2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000081133   ⟸   ENSRNOT00000113398
RefSeq Acc Id: XP_063142754   ⟸   XM_063286684
- Peptide Label: isoform X1
- UniProtKB: Q505J6 (UniProtKB/Swiss-Prot),   A6ILB0 (UniProtKB/TrEMBL),   A0A8I5ZRK2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142755   ⟸   XM_063286685
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063142756   ⟸   XM_063286686
- Peptide Label: isoform X4

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q505J6-F1-model_v2 AlphaFold Q505J6 1-320 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1590470 AgrOrtholog
BioCyc Gene G2FUF-43191 BioCyc
Ensembl Genes ENSRNOG00000042731 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000015560 ENTREZGENE
  ENSRNOT00000015560.8 UniProtKB/Swiss-Prot
  ENSRNOT00000113398 ENTREZGENE
Gene3D-CATH 1.50.40.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7314749 IMAGE-MGC_LOAD
InterPro Mit_carrier UniProtKB/Swiss-Prot
  Mito_Solute_Carrier UniProtKB/Swiss-Prot
  Mitochondrial_sb/sol_carrier UniProtKB/Swiss-Prot
  Mt_carrier_dom_sf UniProtKB/Swiss-Prot
KEGG Report rno:681896 UniProtKB/Swiss-Prot
MGC_CLONE MGC:105602 IMAGE-MGC_LOAD
NCBI Gene 681896 ENTREZGENE
PANTHER MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED UniProtKB/Swiss-Prot
  MITOCHONDRIAL GLUTAMATE CARRIER 2 UniProtKB/Swiss-Prot
Pfam Mito_carr UniProtKB/Swiss-Prot
PhenoGen Slc25a18 PhenoGen
PRINTS MITOCARRIER UniProtKB/Swiss-Prot
PROSITE SOLCAR UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000042731 RatGTEx
Superfamily-SCOP SSF103506 UniProtKB/Swiss-Prot
UniProt A0A8I5ZRK2 ENTREZGENE, UniProtKB/TrEMBL
  A6ILB0 ENTREZGENE, UniProtKB/TrEMBL
  GHC2_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-09 Slc25a18  solute carrier family 25 member 18  Slc25a18  solute carrier family 25 (glutamate carrier), member 18  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-10-16 Slc25a18  solute carrier family 25 (glutamate carrier), member 18  Slc25a18  solute carrier family 25 (mitochondrial carrier), member 18  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-07 Slc25a18  solute carrier family 25 (mitochondrial carrier), member 18  Slc25a18  solute carrier family 25 member 18  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-20 Slc25a18  solute carrier family 25 member 18      Symbol and Name status set to provisional 70820 PROVISIONAL