Cenpp (centromere protein P) - Rat Genome Database

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Gene: Cenpp (centromere protein P) Rattus norvegicus
Analyze
Symbol: Cenpp
Name: centromere protein P
RGD ID: 1589530
Description: Predicted to be involved in CENP-A containing chromatin assembly. Predicted to be located in chromosome, centromeric region; nucleolus; and nucleoplasm. Predicted to be part of inner kinetochore. Predicted to be active in nucleus. Orthologous to human CENPP (centromere protein P); INTERACTS WITH cobalt dichloride; vinclozolin; (-)-epigallocatechin 3-gallate (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: centromere protein P-like; hypothetical protein LOC679342; LOC108348068; LOC679342
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81715,220,521 - 15,395,741 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1715,220,291 - 15,395,739 (+)EnsemblGRCr8
mRatBN7.21715,014,087 - 15,189,312 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1715,014,058 - 15,189,304 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1714,901,030 - 15,076,491 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01716,506,086 - 16,681,546 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01714,827,824 - 15,003,277 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01715,429,526 - 15,603,197 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1715,429,708 - 15,603,199 (+)Ensemblrn6Rnor6.0
Rnor_5.01717,488,014 - 17,661,597 (+)NCBIRnor_5.0Rnor_5.0rn5
Celera1714,745,462 - 14,920,256 (+)NCBICelera
Cytogenetic Map17p14NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:15632090  


Genomics

Comparative Map Data
Cenpp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81715,220,521 - 15,395,741 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1715,220,291 - 15,395,739 (+)EnsemblGRCr8
mRatBN7.21715,014,087 - 15,189,312 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1715,014,058 - 15,189,304 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1714,901,030 - 15,076,491 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01716,506,086 - 16,681,546 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01714,827,824 - 15,003,277 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01715,429,526 - 15,603,197 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1715,429,708 - 15,603,199 (+)Ensemblrn6Rnor6.0
Rnor_5.01717,488,014 - 17,661,597 (+)NCBIRnor_5.0Rnor_5.0rn5
Celera1714,745,462 - 14,920,256 (+)NCBICelera
Cytogenetic Map17p14NCBI
CENPP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38992,325,468 - 92,620,529 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl992,325,953 - 92,620,529 (+)Ensemblhg38GRCh38
GRCh37995,087,750 - 95,382,811 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36994,127,562 - 94,417,267 (+)NCBIBuild 36Build 36hg18NCBI36
Celera965,524,050 - 65,819,504 (+)NCBICelera
Cytogenetic Map9q22.31NCBI
HuRef964,765,521 - 65,055,799 (+)NCBIHuRef
CHM1_1995,234,164 - 95,523,848 (+)NCBICHM1_1
T2T-CHM13v2.09104,491,997 - 104,787,103 (+)NCBIT2T-CHM13v2.0
Cenpp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391349,617,501 - 49,806,457 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1349,617,499 - 49,806,261 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381349,464,025 - 49,652,950 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1349,464,023 - 49,652,785 (-)Ensemblmm10GRCm38
MGSCv371349,559,428 - 49,748,100 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361349,475,996 - 49,664,668 (-)NCBIMGSCv36mm8
Celera1350,553,679 - 50,743,505 (-)NCBICelera
Cytogenetic Map13A5NCBI
cM Map1325.27NCBI
Cenpp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555155,220,461 - 5,447,983 (-)Ensembl
ChiLan1.0NW_0049555155,220,257 - 5,448,347 (-)NCBIChiLan1.0ChiLan1.0
CENPP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21146,808,226 - 47,104,058 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1946,810,611 - 47,106,432 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0963,447,366 - 63,743,316 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1991,520,939 - 91,808,971 (+)NCBIPanPan1.1PanPan1.1panPan2
CENPP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1198,801,384 - 99,019,371 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl198,799,939 - 99,019,334 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha199,195,230 - 99,413,185 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0199,418,188 - 99,636,324 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl199,396,222 - 99,636,272 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1199,031,281 - 99,249,303 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0198,766,768 - 98,984,492 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0199,522,458 - 99,741,277 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Cenpp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049447,760,784 - 7,988,332 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364871,977,341 - 2,199,216 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364871,977,595 - 2,199,276 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CENPP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl342,053,058 - 42,308,429 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1342,053,074 - 42,309,745 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2343,244,379 - 43,492,706 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CENPP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.112102,851,498 - 103,121,113 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603891,123,960 - 91,394,606 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cenpp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248683,780,864 - 4,031,972 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Cenpp
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11468,442,653 - 68,624,415 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Cenpp
1341 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17143999106Rat
2300002Iddm36Insulin dependent diabetes mellitus QTL 361.98blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)17926675540968173Rat
2293664Bmd28Bone mineral density QTL 285.10.0001femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)17436005727233623Rat
8552966Pigfal18Plasma insulin-like growth factor 1 level QTL 188.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)171286094257860942Rat
1300123Bp194Blood pressure QTL 1942.82arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)17212084342054133Rat
1582224Epfw4Epididymal fat weight QTL 43.50.0058epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)17920650523859062Rat
1582225Bw67Body weight QTL 676.20.0001body mass (VT:0001259)body weight (CMO:0000012)17920650523859062Rat
2302377Scl61Serum cholesterol level QTL 614.36blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)17622199858177198Rat
1582226Bw64Body weight QTL 644.20.0017body mass (VT:0001259)body weight (CMO:0000012)17920650523859062Rat
9589151Insul30Insulin level QTL 308.820.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)171286094257860942Rat
10401807Kidm52Kidney mass QTL 52kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17131706603Rat
10054088Scort28Serum corticosterone level QTL 282.040.0102blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17473353449733534Rat
9589057Scfw6Subcutaneous fat weight QTL 68.620.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)171286094257860942Rat
1582208Kidm32Kidney mass QTL 323.90.0018kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17920650523859062Rat
9590154Scort9Serum corticosterone level QTL 923.570.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)171286094257860942Rat
9590088Insglur7Insulin/glucose ratio QTL 720.380.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)171286094257860942Rat
1549900Iddm20Insulin dependent diabetes mellitus QTL 203.7pancreas integrity trait (VT:0010560)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)17122181410Rat
2317053Aia25Adjuvant induced arthritis QTL 252.69joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)171060469455604694Rat
1354613Kidm14Kidney mass QTL 146.2kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)17136045694Rat
7411666Foco31Food consumption QTL 3111.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)171286094257860942Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented dorsal coat/hair area to total dorsal coat/hair area ratio (CMO:0001811)17121499218Rat
2303627Vencon8Ventilatory control QTL 80.001respiration trait (VT:0001943)tidal volume (CMO:0000222)17473353449733534Rat
1581553Pur14Proteinuria QTL 145.30.0001urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)17798524316523460Rat
70184BpQTLcluster14Blood pressure QTL cluster 143.38arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)17857434232199534Rat
1582258Bw76Body weight QTL 764.60.0005body mass (VT:0001259)body weight (CMO:0000012)17920650523859062Rat
631207Niddm41Non-insulin dependent diabetes mellitus QTL 41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)17138037084Rat
1582199Insul5Insulin level QTL 53.40.0119blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)17920650523859062Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17143999106Rat
2293648Bmd31Bone mineral density QTL 314.50.0001femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)17436005727233623Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17143999106Rat
1641902Colcr7Colorectal carcinoma resistance QTL 73.350.0044intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)17212084322087569Rat
1582241Bw70Body weight QTL 704.60.0003body mass (VT:0001259)body weight (CMO:0000012)17920650523859062Rat
1582245Bw73Body weight QTL 734.60.0004body mass (VT:0001259)body weight (CMO:0000012)17920650523859062Rat
9590316Scort21Serum corticosterone level QTL 214.750.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17122877318Rat

Markers in Region
D17Rat112  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81715,228,386 - 15,228,609 (+)Marker Load Pipeline
mRatBN7.21715,021,952 - 15,022,177 (+)MAPPERmRatBN7.2
Rnor_6.01714,597,329 - 14,597,551NCBIRnor6.0
Rnor_6.01715,437,603 - 15,437,825NCBIRnor6.0
Rnor_5.01717,496,053 - 17,496,275UniSTSRnor5.0
Rnor_5.01716,649,651 - 16,649,873UniSTSRnor5.0
RGSC_v3.41720,976,915 - 20,977,138RGDRGSC3.4
RGSC_v3.41720,976,916 - 20,977,138UniSTSRGSC3.4
Celera1714,753,540 - 14,753,763UniSTS
RGSC_v3.11720,976,916 - 20,977,138RGD
RH 3.4 Map17159.1UniSTS
RH 3.4 Map17159.1RGD
RH 2.0 Map17139.9RGD
SHRSP x BN Map1711.64RGD
Cytogenetic Map17p14UniSTS
BB196053  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21715,188,779 - 15,188,895 (+)MAPPERmRatBN7.2
Rnor_6.01715,602,665 - 15,602,780NCBIRnor6.0
Rnor_5.01717,661,065 - 17,661,180UniSTSRnor5.0
RGSC_v3.41721,144,834 - 21,144,949UniSTSRGSC3.4
Celera1714,919,724 - 14,919,839UniSTS
Cytogenetic Map17p14UniSTS
RH130263  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21715,189,055 - 15,189,250 (+)MAPPERmRatBN7.2
Rnor_6.01715,602,941 - 15,603,135NCBIRnor6.0
Rnor_5.01717,661,341 - 17,661,535UniSTSRnor5.0
RGSC_v3.41721,145,110 - 21,145,304UniSTSRGSC3.4
Celera1714,920,000 - 14,920,194UniSTS
Cytogenetic Map17p14UniSTS
BE112196  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21715,180,955 - 15,181,114 (+)MAPPERmRatBN7.2
Rnor_6.01715,594,792 - 15,594,950NCBIRnor6.0
Rnor_5.01717,653,242 - 17,653,400UniSTSRnor5.0
RGSC_v3.41721,135,915 - 21,136,073UniSTSRGSC3.4
Celera1714,911,629 - 14,911,787UniSTS
RH 3.4 Map17173.5UniSTS
Cytogenetic Map17p14UniSTS
BF405276  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21715,144,206 - 15,144,380 (+)MAPPERmRatBN7.2
Rnor_6.01715,558,044 - 15,558,217NCBIRnor6.0
Rnor_5.01717,616,494 - 17,616,667UniSTSRnor5.0
RGSC_v3.41721,099,167 - 21,099,340UniSTSRGSC3.4
Celera1714,874,994 - 14,875,167UniSTS
RH 3.4 Map17174.9UniSTS
Cytogenetic Map17p14UniSTS
RH139253  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21715,032,432 - 15,032,646 (+)MAPPERmRatBN7.2
Rnor_6.01714,607,806 - 14,608,019NCBIRnor6.0
Rnor_6.01715,448,080 - 15,448,293NCBIRnor6.0
Rnor_5.01717,506,530 - 17,506,743UniSTSRnor5.0
Rnor_5.01716,660,127 - 16,660,340UniSTSRnor5.0
RGSC_v3.41720,987,393 - 20,987,606UniSTSRGSC3.4
Celera1714,763,964 - 14,764,177UniSTS
RH 3.4 Map17179.4UniSTS
Cytogenetic Map17p14UniSTS
RH141814  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21715,121,081 - 15,122,214 (+)MAPPERmRatBN7.2
Rnor_6.01715,534,917 - 15,536,049NCBIRnor6.0
Rnor_6.01714,696,450 - 14,697,582NCBIRnor6.0
Rnor_5.01717,593,367 - 17,594,499UniSTSRnor5.0
Rnor_5.01716,748,774 - 16,749,906UniSTSRnor5.0
RGSC_v3.41721,076,040 - 21,077,172UniSTSRGSC3.4
Celera1714,851,872 - 14,853,004UniSTS
RH 3.4 Map17174.2UniSTS
Cytogenetic Map17p14UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
13 1 56 145 64 60 48 68 48 6 293 146 11 138 86 84 12 16 16

Sequence


Ensembl Acc Id: ENSRNOT00000093261   ⟹   ENSRNOP00000076249
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1715,220,291 - 15,395,739 (+)Ensembl
mRatBN7.2 Ensembl1715,014,058 - 15,189,304 (+)Ensembl
Rnor_6.0 Ensembl1715,429,708 - 15,603,199 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000093639
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1715,586,383 - 15,603,199 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000149934   ⟹   ENSRNOP00000108875
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1715,220,291 - 15,267,580 (+)Ensembl
RefSeq Acc Id: NM_001402493   ⟹   NP_001389422
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81715,220,521 - 15,395,741 (+)NCBI
mRatBN7.21715,014,087 - 15,189,312 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001389422 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL98106 (Get FASTA)   NCBI Sequence Viewer  
  EDL98107 (Get FASTA)   NCBI Sequence Viewer  
  EDL98108 (Get FASTA)   NCBI Sequence Viewer  
  EDL98109 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000076249
  ENSRNOP00000076249.1
  ENSRNOP00000108875.1
Ensembl Acc Id: ENSRNOP00000076249   ⟸   ENSRNOT00000093261
RefSeq Acc Id: NP_001389422   ⟸   NM_001402493
- UniProtKB: A0A1W2Q6F6 (UniProtKB/TrEMBL),   A6J6V6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000108875   ⟸   ENSRNOT00000149934

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A1W2Q6F6-F1-model_v2 AlphaFold A0A1W2Q6F6 1-285 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700352
Promoter ID:EPDNEW_R10873
Type:initiation region
Name:LOC679342_1
Description:hypothetical protein LOC679342
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01715,429,737 - 15,429,797EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1589530 AgrOrtholog
BioCyc Gene G2FUF-10004 BioCyc
Ensembl Genes ENSRNOG00000062220 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000093261 ENTREZGENE
  ENSRNOT00000093261.3 UniProtKB/TrEMBL
  ENSRNOT00000149934.1 UniProtKB/TrEMBL
InterPro CENP-P UniProtKB/TrEMBL
NCBI Gene 679342 ENTREZGENE
PANTHER CENTROMERE PROTEIN P UniProtKB/TrEMBL
  PTHR28577 UniProtKB/TrEMBL
Pfam CENP-P UniProtKB/TrEMBL
PhenoGen Cenpp PhenoGen
RatGTEx ENSRNOG00000062220 RatGTEx
UniProt A0A1W2Q6F6 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0M2P1_RAT UniProtKB/TrEMBL
  A6J6V6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Cenpp  centromere protein P  LOC108348068  centromere protein P-like  Data merged from RGD:11481254 737654 PROVISIONAL
2018-12-04 Cenpp  centromere protein P  LOC679342  hypothetical protein LOC679342  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2018-12-04 LOC679342  hypothetical protein LOC679342  Cenpp  centromere protein P  Data merged from RGD:1587798 737654 PROVISIONAL
2016-08-02 LOC108348068  centromere protein P-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2012-10-01 Cenpp  centromere protein P  LOC685977  hypothetical protein LOC685977  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-19 LOC679342  hypothetical protein LOC679342      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC685977  hypothetical protein LOC685977      Symbol and Name status set to provisional 70820 PROVISIONAL