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Gene: Shisa7 (shisa family member 7) Rattus norvegicus

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Symbol:

Shisa7

Name:

shisa family member 7

RGD ID:

1583944

Description:

Predicted to enable GABA receptor binding activity and ionotropic glutamate receptor binding activity. Predicted to be involved in several processes, including gamma-aminobutyric acid receptor clustering; positive regulation of long-term synaptic potentiation; and regulation of GABA-A receptor activity. Predicted to be located in asymmetric, glutamatergic, excitatory synapse. Predicted to be active in glutamatergic synapse; postsynaptic density; and synaptic membrane. Orthologous to human SHISA7 (shisa family member 7); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; amitrole.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

hypothetical protein LOC684757; hypothetical protein LOC691429; LOC691429; shisa homolog 7; shisa homolog 7 (Xenopus laevis)

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SHISA7 (shisa family member 7)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Shisa7 (shisa family member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Shisa7 (shisa family member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SHISA7 (shisa family member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SHISA7 (shisa family member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Shisa7 (shisa family member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SHISA7 (shisa family member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SHISA7 (shisa family member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Shisa7 (shisa family member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Shisa7 (shisa family member 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	CLUH (CLUH binding protein of NUMT mRNA)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	Shisa7 (shisa family member 7)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	SHISA7 (shisa family member 7)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	shisa7b (shisa family member 7)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	shisa7	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	shisa7	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	78,022,680 - 78,041,748 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	78,022,831 - 78,041,748 (+)	Ensembl				GRCr8
mRatBN7.2	1	68,993,900 - 69,012,943 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	68,994,025 - 69,012,943 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	74,339,062 - 74,357,989 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	82,903,373 - 82,922,296 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	76,052,129 - 76,071,041 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	1	77,306,657 - 77,325,535 (+)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	1	81,241,566 - 81,260,490 (+)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	1	78,958,054 - 78,976,897 (+)	NCBI		Lyon_Hypertensive
F344_StmMcwi	1	76,199,564 - 76,218,481 (+)	NCBI		F344_StmMcwi
Rnor_6.0	1	72,545,413 - 72,564,513 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	72,545,596 - 72,564,513 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	75,971,937 - 75,990,945 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	67,710,526 - 67,729,443 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	68,111,510 - 68,130,334 (-)	NCBI		Celera
Cytogenetic Map	1	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

amitrole (EXP)

amphetamine (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

chlorpyrifos (ISO)

Cuprizon (EXP)

dimethylarsinic acid (EXP)

ethanol (ISO)

ethylparaben (ISO)

fenvalerate (EXP)

furan (EXP)

maneb (ISO)

methimazole (EXP)

paracetamol (EXP)

paraquat (ISO)

propiconazole (EXP)

Soman (EXP)

sulfadimethoxine (EXP)

titanium dioxide (ISO)

tributylstannane (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

gamma-aminobutyric acid receptor clustering (IBA,IEA,ISO)

gamma-aminobutyric acid signaling pathway (IBA,IEA,ISO)

memory (IEA,ISO)

positive regulation of long-term synaptic potentiation (IEA,ISO)

regulation of AMPA glutamate receptor clustering (IEA,ISO)

regulation of AMPA receptor activity (ISO)

regulation of GABA-A receptor activity (ISO)

Cellular Component

AMPA glutamate receptor complex (ISO)

asymmetric, glutamatergic, excitatory synapse (IEA,ISO)

dendritic spine membrane (IBA)

glutamatergic synapse (IEA,ISO)

membrane (IEA)

postsynaptic density (IBA,IEA,ISO)

postsynaptic membrane (IBA)

postsynaptic specialization membrane (IEA,ISO)

Molecular Function

GABA receptor binding (IBA,IEA,ISO)

ionotropic glutamate receptor binding (IEA,ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:29199957	PMID:31601770

Genomics

Comparative Map Data

Shisa7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	78,022,680 - 78,041,748 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	78,022,831 - 78,041,748 (+)	Ensembl				GRCr8
mRatBN7.2	1	68,993,900 - 69,012,943 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	68,994,025 - 69,012,943 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	74,339,062 - 74,357,989 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	82,903,373 - 82,922,296 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	76,052,129 - 76,071,041 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	1	77,306,657 - 77,325,535 (+)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	1	81,241,566 - 81,260,490 (+)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	1	78,958,054 - 78,976,897 (+)	NCBI		Lyon_Hypertensive
F344_StmMcwi	1	76,199,564 - 76,218,481 (+)	NCBI		F344_StmMcwi
Rnor_6.0	1	72,545,413 - 72,564,513 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	72,545,596 - 72,564,513 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	75,971,937 - 75,990,945 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	67,710,526 - 67,729,443 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	68,111,510 - 68,130,334 (-)	NCBI		Celera
Cytogenetic Map	1	q12	NCBI

SHISA7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	55,428,740 - 55,443,300 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	55,428,740 - 55,443,300 (-)	Ensembl			hg38	GRCh38
GRCh37	19	55,940,107 - 55,954,667 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	60,636,335 - 60,654,784 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	19	52,980,996 - 53,005,709 (-)	NCBI		Celera
Cytogenetic Map	19	q13.42	NCBI
HuRef	19	52,261,714 - 52,265,905 (-)	NCBI		HuRef
CHM1_1	19	55,933,703 - 55,947,827 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	58,524,194 - 58,538,751 (-)	NCBI		T2T-CHM13v2.0

Shisa7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	4,828,551 - 4,847,788 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	4,828,551 - 4,847,695 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	7	4,825,551 - 4,844,866 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	4,825,552 - 4,844,696 (-)	Ensembl			mm10	GRCm38
MGSCv37	7	4,777,154 - 4,796,298 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	7	4,431,561 - 4,442,291 (-)	NCBI		MGSCv36	mm8
Celera	7	4,563,009 - 4,582,132 (-)	NCBI		Celera
Cytogenetic Map	7	A1	NCBI
cM Map	7	2.79	NCBI

Shisa7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955567	840,227 - 845,009 (+)	Ensembl
ChiLan1.0	NW_004955567	840,193 - 845,093 (+)	NCBI	ChiLan1.0	ChiLan1.0

SHISA7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	61,571,316 - 61,592,508 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	63,300,330 - 63,321,069 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	52,475,852 - 52,496,819 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	61,165,673 - 61,175,020 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2

SHISA7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	102,260,917 - 102,270,388 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	102,261,484 - 102,268,179 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	102,310,808 - 102,328,742 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	102,907,280 - 102,925,221 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	102,905,126 - 102,925,247 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	102,544,484 - 102,562,438 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	102,256,598 - 102,274,537 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	103,019,825 - 103,037,770 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Shisa7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	1,878,026 - 1,895,150 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936886	664,052 - 682,618 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936886	664,075 - 675,008 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SHISA7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	59,582,708 - 59,601,885 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	6	59,582,706 - 59,601,979 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

SHISA7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	48,028,539 - 48,049,478 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666045	677,739 - 697,961 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Shisa7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624832	1,900,580 - 1,909,125 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624832	1,898,049 - 1,909,155 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Shisa7
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	177,415,710 - 177,431,277 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Shisa7
108 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	1338
Count of miRNA genes:	325
Interacting mature miRNAs:	421
Transcripts:	ENSRNOT00000022698
Prediction methods:	Microtar, Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331732	Srn4	Serum renin concentration QTL 4	4.467		renin activity (VT:0005581)	plasma renin activity level (CMO:0000116)	1	43457837	87558729	Rat
1578649	Bmd8	Bone mineral density QTL 8	4.9		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	1	51940904	101229020	Rat
1358359	Sradr1	Stress Responsive Adrenal Weight QTL 1	4.74		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	39728272	132889942	Rat
4889929	Bss87	Bone structure and strength QTL 87	6.7		tibia area (VT:1000281)	tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)	1	46302615	91302615	Rat
634314	Niddm44	Non-insulin dependent diabetes mellitus QTL 44			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	51941022	208479811	Rat
1331792	Rf29	Renal function QTL 29	4.589		urine potassium amount (VT:0010539)	urine potassium level (CMO:0000128)	1	43457837	87558729	Rat
2313062	Bmd73	Bone mineral density QTL 73	3.9	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	46302615	91302615	Rat
8552900	Pigfal1	Plasma insulin-like growth factor 1 level QTL 1	7.4		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	1	43509952	88509952	Rat
1578654	Bss10	Bone structure and strength QTL 10	4		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	1	51940904	168768703	Rat
1354643	Foco2	Food consumption QTL 2	7.17	0.0001	eating behavior trait (VT:0001431)	food intake rate (CMO:0000427)	1	42122968	87122968	Rat
2313065	Bss67	Bone structure and strength QTL 67	3.1	0.0001	tibia area (VT:1000281)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
2313069	Bss68	Bone structure and strength QTL 68	2.9	0.0001	tibia size trait (VT:0100001)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
631495	Bp96	Blood pressure QTL 96	4.52		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	66404680	111404680	Rat
70225	Bp58	Blood pressure QTL 58	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34184556	172281316	Rat
2313075	Bss66	Bone structure and strength QTL 66	3.4	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	46302615	91302615	Rat
2298545	Neuinf8	Neuroinflammation QTL 8	4.6		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	1	66009857	160501508	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34565911	208798288	Rat
1331778	Rf28	Renal function QTL 28	4.66		urine potassium amount (VT:0010539)	urine potassium excretion rate (CMO:0000761)	1	43457837	87558729	Rat
2313077	Bss69	Bone structure and strength QTL 69	3.5	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	1	46302615	91302615	Rat
1302788	Scl19	Serum cholesterol QTL 19	4.6	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	66400974	132889942	Rat
2313402	Anxrr24	Anxiety related response QTL 24			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	1	51511344	153680016	Rat
1331785	Rf27	Renal function QTL 27	4.643		urine sodium amount (VT:0006274)	urine sodium level (CMO:0000129)	1	30708375	87558729	Rat
61342	Bp27	Blood pressure QTL 27	3.4	0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	65405637	96805205	Rat
1300172	Bp172	Blood pressure QTL 172	3.56		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	1	34565726	79565726	Rat
4889962	Bss94	Bone structure and strength QTL 94	3.8		tibia area (VT:1000281)	tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)	1	51909206	91302615	Rat
6903308	Scl36	Serum cholesterol QTL 36	2	0.0125	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	58769992	103769992	Rat
2313092	Bmd72	Bone mineral density QTL 72	2.5	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	1	46302615	91302615	Rat
2300164	Bmd44	Bone mineral density QTL 44	5.4	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	1	66077886	111077886	Rat
2313097	Bss70	Bone structure and strength QTL 70	3.5	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
9589820	Insglur3	Insulin/glucose ratio QTL 3	10.75	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	1	43509952	88509952	Rat
152025249	Scl82	Serum cholesterol level QTL 82	4.77		blood cholesterol amount (VT:0000180)		1	52891222	109116986	Rat
1354599	Bw29	Body weight QTL 29	3.46	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	1	42122968	87122968	Rat
4889919	Bss86	Bone structure and strength QTL 86	4.1		tibia area (VT:1000281)	tibia midshaft total cross-sectional area (CMO:0001715)	1	46302615	91302615	Rat
8552948	Pigfal11	Plasma insulin-like growth factor 1 level QTL 11	4.7		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	1	43509952	88509952	Rat

Markers in Region

RH134728

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	68,993,378 - 68,993,579 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	72,544,950 - 72,545,150	NCBI	Rnor6.0
Rnor_5.0	1	75,991,300 - 75,991,500	UniSTS	Rnor5.0
RGSC_v3.4	1	67,709,880 - 67,710,080	UniSTS	RGSC3.4
Celera	1	68,130,780 - 68,130,980	UniSTS
Cytogenetic Map	1	q12	UniSTS

RH136714

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	68,993,626 - 68,993,746 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	72,545,198 - 72,545,317	NCBI	Rnor6.0
Rnor_5.0	1	75,991,133 - 75,991,252	UniSTS	Rnor5.0
RGSC_v3.4	1	67,710,128 - 67,710,247	UniSTS	RGSC3.4
Celera	1	68,130,613 - 68,130,732	UniSTS
Cytogenetic Map	1	q12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	5	58	160	75	74	43	89	43	6	320	177	11	139	80	92	31	16	16

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001145175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228290	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589752	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589753	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589754	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589755	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039091559	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039091565	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274859	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274863	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000022698 ⟹ ENSRNOP00000022698

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	78,022,831 - 78,041,748 (+)	Ensembl
mRatBN7.2 Ensembl	1	68,994,025 - 69,012,943 (+)	Ensembl
Rnor_6.0 Ensembl	1	72,545,596 - 72,564,513 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000114646 ⟹ ENSRNOP00000094674

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	78,022,831 - 78,041,748 (+)	Ensembl
mRatBN7.2 Ensembl	1	68,994,025 - 69,012,943 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000161994 ⟹ ENSRNOP00000108986

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	78,029,070 - 78,041,748 (+)	Ensembl

RefSeq Acc Id:

NM_001145175 ⟹ NP_001138647

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	78,022,831 - 78,041,748 (+)	NCBI
mRatBN7.2	1	68,994,025 - 69,012,943 (+)	NCBI
Dahl_SR_JrHsd	1	77,306,657 - 77,325,535 (+)	NCBI
Lyon_Normotensive	1	81,241,566 - 81,260,490 (+)	NCBI
Lyon_Hypertensive	1	78,958,054 - 78,976,897 (+)	NCBI
F344_StmMcwi	1	76,199,564 - 76,218,481 (+)	NCBI
Rnor_6.0	1	72,545,596 - 72,564,513 (+)	NCBI
Rnor_5.0	1	75,971,937 - 75,990,945 (-)	NCBI
RGSC_v3.4	1	67,710,526 - 67,729,443 (+)	RGD
Celera	1	68,111,510 - 68,130,334 (-)	RGD

Sequence:

show sequence

GGCTGGCAGACACGCGCTCGCGCTGCCTACCCTGGCTGGCCCCCACGCTGCCACCCCCGATTCC
CTGAAGGTCCCGCATCCGGAAAGTGAGTCCTCCCTTCGTAAAAACTTCTGTACGCCCCTCCTCC
GTCCCCGCTAATTCTTTCTTTTCTCCTGCTGAGCCCTTCTCTCGTCGCTCCCTTTGCCCTCCCC
TCCCACCGCTGCAATTCGGCTCCGGGATCCGCAGCCTGGCGTCCCGGTGTGCACCATGCCGGCC
CTGCTGTTGATCGGGACCGTCGCGCTGCTAGCCTCCACCGCGGGCCCGGTGGGGGCGCGCCCAT
CCAACGACACAAGCGCCGTGGCCCCGGGCCCGCTGCCCGCGCTACTCGCGCACCTGCGGCGCCT
GACCGGGGCTCTGGCGGGCGGCGGGAGCGCAGCGGGCGCCAACGCCAACGCCACCAAGACCAGC
CCCGCGGGTGGCACGGGTGCAGCGGCACGGGCGCCCCCTCCGGCCGAGCTCTGCCATGGCTACT
ACGATGTCATGGGCCAGTACGACGCCACCTTCAACTGCAGCACCGGCTCCTACCGCTTCTGCTG
TGGCACCTGCCACTACCGTTTCTGCTGCGAGCACCGCCACATGCGCCTGGCGCAGGCCTCCTGC
TCCAACTACGACACACCACGCTGGGCCACCACGCCCCCGCCGCTGGCTGGAGGCGCCGGGGGCG
CTGGGGGTGCGGGTGGGGGGCCAGGGCCAGGCCAGGCAGGGTGGCTGGAAGGGGGCAGGGCCGG
GGGCGCTGGGGGTCGTGGGGGAGAGGGCCCAGGGGGCAGCACAGCCTACGTGGTGTGCGGAGTC
ATCAGTTTCGCTCTGGCGGTGGGCGTCGGTGCCAAAGTGGCCTTCAGCAAGGCGTCACGTGCGC
CCAGGGCGCACCGGGAGATCAACGTGCCCAGAGCTCTGGTGGATATTCTCAGGCATCAAGCAGG
ACCTGCAACCCGCCCGGACCGGGCCAGAAGCAGTTCTCTGACCCCAGGGCTGGGAGGCCCAGAG
AGCATGGCCCCTAGGACGCCCAAGAACCTTTACAACACCATGAAGCCCTCCAACCTTGATAACC
TGCACTACAACGTCAACAGTCCCAAGCACCGCGCCGCCACACTGGACTGGCGTGCTATGCCACC
GCCCAGCCCTTCCCTGCACTACTCTACGCTGTCCTGCTCTCGATCCTTCCACAACCTCTCTCAT
CTTCCCCCATCGTATGAGGCGGCTGTGAAATCAGAATTGAATCGATACTCTTCCCTCAAGAGAC
TGGCTGAGAAAGATCTGGATGAAGCCTACCTGAAGCGCAGACATCTAGAGATGCCACGTGGAAC
ACTGCCTTTGCATGCACTCCGGCGGCCAGGCACTGGAGGTGGCTACCGCATGGATGGCTGGGGT
GGCCCTGAGGAGCTGGGCCTGGCACCGGCACCCAACCCCCGGCGGGTTATGTCCCAGGAGCACC
TGCTGGGTGATGGCGGCCGAGCTTCCCGCTATGAGTTCACATTGCCTCGAGCGCGCCTGGTGTC
TCAAGAACACCTGCTGCTATCCTCACCGGAGGCGCTTCGCCAGAGTCGCGAGCACCTGCTGTCA
CCCCCACGAAGTCCTGCACTGCCCCCAGATCCCACCACCCGGGCCAGCCTGGCTGCCTCACACT
CCAACCTGCTGCTGGGGCCTGGGGGCCCCCCCACACCCCTGCATGGGTTGCCTCCATCAGGCCT
GCATGCCCACCATCACCATGCCCTTCATGGCTCTCCTCAGCCAGCCTGGATGTCTGATGCGGGC
GGGGGTGGGGGCACACTGGCCCGCAGGCCACCCTTTCAGCGCCAGGGAACCCTGGAGCAGCTGC
AGTTCATTCCTGGGCACCACTTGCCCCAGCACCTGCGCACTGCCAGCAAGAACGAAGTGACTGT
CTGAGGCCGGGTGAAGTGCTGGGGGCTGTGGCTTCCGAGGCCCCCTTCTTCCAGCCCAGATCTC
CATCACAGGCTTATCATACACACCAAGGGTCTGAGACCAGATGGGCCCTTGGACCGGAGACCAC
GCCTCCTTTTGGGATGTTACAGTAGATGAGATCTCTCCTCCTACTTTGTCACTATTTGAACCAA
GGCCTCCCTCCCATGATGTCATCCCAGAGGAAGGAGGCCTGTACATGAGGTCATTGCTAGCAAA
TATGTCTGTGTTTTATGATGTCATTGCAGGGACTAAACCTCCTTCCTATGAGGTCACCACAGAG
GAAGAGCCCTGCCTATGAGGTCATCACTAGAGGTTATGTCGATTTTGCATGGCATCACCACAGA
GACTCCTTTCCCGTGATGTCACCACAGACAATGCCTTGTCCCATCCTGTCATCCCTAGAAACAA
AAATTTCTTCCTGAAGTGTCACTACGGAGATAAGTCTCACACTTCTTGAGACTTGTTGACATCA
TCCTGACTGAGCGCCGAGGCCTCTTGCAATTATCATCACGGGAAACATGTTTCTCTGCCGTGGA
GAAGATGCCGCCGCCTTTCCATGATGCCACCACAACAGACAAAGCCATTTTCCTGGGACACATT
GCAGGGTACCATGCCCTGCCAATTTTGTCCTCACTAAAGATTAGGCCTCCTTTCCACAATGCTG
TCACGGGATTTTGCCTCCCTCCTGTGATGCCATCACCAGAATAGGTGCCTTGCCCAATGTCGCC
ATCACAGGGACCGTGCCTCTTCATGTGATGTCATTACCAATAATGACCACCTGTTCCTGGGACC
TCTCCAGGGTGAGGCCCTTCTGTGGTGTGGCCACCAGATAACACCCACTTGGAAATGACACCAG
GAGACACCTCTATTTCTCTGCCATGTCGTGAGAAAGTTGGGCATGTGTAGCCCAAGACCACCTG
GGAAGAGGCCAGAGAAAGTAGTCGGTCCTGAGATATAATATGAAGGGTGTCGGCACTAGGGATG
CTAAGACAGAGATCTGTCTGTAGGATGCTGGTGATGATGCCCTCCATTGCGTGGACATCATCAT
AGAGTGCTTCCATCTCAGAGGTGGTCCCCACTCTAGATGACCAATAGTAGTGATTGCATAATGA
TTATGTCATCAGAGTCCTTATCTTACTTCCCTATAACTAAGTCCGTGGCTTCTTCCCATGACCC
CAGGGACATAGCCAACAGGATGTCTACTAGCCCCTCTAAAGGAACGTTGGGCCTGTGCAGTGAG
TCCTTGGGGATGGCACCCATGGATGAGCTTCAGCTCCAAAGCCACTCTGACCCATGAGGCTTCT
AAAGTCGTAGGACTCATAGGTGAGCCAAAGGGTGGCATCACTTCTTTCTGCCATATCTAAAGAT
ATCAACTCTGTCAATAGAGGCCCCATCTCTACTGGAGGGGGAGGGTTGGGGTAAATGTGCTGCT
GACCTTACCAATGATATTACCATTGACACCCAGTGTCCTCCTTTCATAATGGCATAGCAGTCGG
GGTCCAATGTTAACTGTGTCATTTTCCAGGATTCCATAGGACTCACCTCAACTACCATATCATC
TCCCAGGCATTATCACCATTAATGGTATCATCATTGTCTCCCAAGATTCCTCCCAACCATGGTG
TTATCATCTCCCAGGGTTCAAACAACATGTTGTCATGATGTCCCAGGATCCACAAGCTTGTTCT
CATCGCTTCCCAGAATCCTTCACAACATGCTCACCTCATCACCTCCTGGGATCCATCACAGCCT
GGGGGGTCTTTATCATCTCCCAGCCATCTCAACCATACAGTCCTCACCATCTCCCAGGATCCAT
CAGAACCATGCTGTCCTTACCTCTCAGGAGCCAGTACAACCATGGTGTCCTTGTCTCCCAGGCT
GTGCAATGGATAATGATGTCCTCATTTTCCAAAAATCCATTATGCCTCTCTACCAGGACTTGTT
AGGACTGATGGAGCCAGTGTTTCTCATAATTCCTTATAATTGCAGTGTCACCTCCCAGGATCCA
CTTTAACCATGTCTTCATGTTTCAGTAGCCACCACAGCTATGATGTCACCACTTCATAAAATCC
ATTCCAACTGTGGTGTCCTTGTGTTGTTACATCCCAGGATCTATCTGATAATGTCACGAGTATC
CTATATTCAATGAGAATCCATGAAAACCATCATTCTGTCACCTCCCTGGACCCATCAATTATGA
CCTATCATGACTCATTGGGATTAACTGTTACCATGGTGCCATCACCTCCAAGCAGCCATAATAG
CCAATGGTGTCTTCATTCCCCAGGACCCACTTTAACCCCAGTGTCTCCATGACTTAGGATTTCT
GAAATCCAGTGATATCATCTCTCCAGTCTACCATAACCACAGTTGTCATCACCTTTTGGACCCA
TGACAGCAAATAATGTCATCTTTTCCCAGAGTACGCTTCAGCCATGGTGCCATCCTCTCCCAGA
ATCCATGTAAAACTGTGTGTCCTCATCTTCCAGGACCCATGGCAATTGTGTGCCATCTGCCAGG
ACCCACCATCTTAGGGTCCAAATGCTGTGACAAGCTGTATTTCAATTGTCCTCTGGGGAACCAG
CACAACAGGCCATTTCCCATTCCCTCCAATGGACTGGGGTGGAGCCAGCTATCTCCCTCTGATA
ATGTCACCCTCTACTCTGGCCCTTCTTAATCGTCACTGCCTCATTCCTGATCCAAATAGATATC
TGGATCAGCTTCACCTACAGACTTGGCCTTGGCCAGCTTCCTTCCACTCACTGGTGAGTGCATC
CAAACTCTTCTTGGATTACCACTGTCCCTTGCCCAGCCATCTGATCGGTGACAGGGTCATCTCT
GTGACCTCTCCACAGCAGCAACAGAGAGGGAGCTTCCCAGCCCTTAGATGGCATCACTGCCCTA
CCCAACTCCATCCCTGGTACTTGGTCCCAACCAGGATCAGAACTTGCTAGCTTGGACCAAGCTC
TCTTTAGAGAGGATGTGTGAGGTGCCACAGCTGATAAACCACCTGATGGCCTAGTCCTGGGCTG
GGTATATCCGAGAGCAATGGCCCCTGCTACCTTTACCTGAAAAGGCCAAGGGTGCTCCTTCGCC
CCTTTCCCTAACATTCCAGGGAGTACCCAGGGGCTTCAAGGAGTCCCTAATACCCAGTGCACAA
TCTTACCCTGCCACATCCAGTTCTCTGTACATATAGCCATGTTTCAGGGGGGCGGCCATTCCCC
ACTATTAAAGGGCTACATGCCCCCCTCCCAGCCCCTAAGGCAAGGAGGGGGGCTCTTCTCCCTC
CTCTGGGCCGCCCTCTCCCTCTTATGCCTCCCTCCCCCACCAAATATTGGCCTCTGTGGCCATC
CCTTCTTGCCCAGAGCCTAGATGGGATAGATGGTGCCAGGCTCTCACCAAGCTGAGGATAGTAG
GAGGTTACCACCAATCTTCCTAAACTCCAGCACCAGGTTTTCTGTTTCCCAACTATAGATGCTC
TGTGGGCTCCCCATCCATTCTAGGACCTCCCTTTAAGCGTGCTTAACACTCCCACGGAACACAC
AGCTTTTTTCAGCCCCCAGCATTGGAGGGGTTCAGGAGCTTTCAGCTTTTGTTTGCCCGTTCTC
TCCCTCCCTCTTTCCCCCAACCTGAATTCCTTCCTGGGATCTGCCCTTACCCCAGCCTCTGCCC
TCCACCTGCCTGACCCTGGAGTCTTGACCTCTTATTTTAATAAAGCCATAGTGGGGAGAGGTCT
TGAGGGTGGGCCAGCAGGCCCTGTTCTGCTCATCCCCCACCATCACCACGATGCTTCCAGAGCT
CCAGAGCGGGGACTTAGCCTTCTGAGTCTTCCCCTCCCCTTCCCCTCTGCTCCCCAGTAAACAC
AAACACACATGGACAAGGCATGCGCTGCCCTGAAGGAAAGCCCCCTTCTGGTTGGGGGCTGCAG
AGGGGGTGTCAGAGACAAGATCAAAAGTGCCACACCAGAGGTTCCTCCACACCTCTGAACCCCA
TTCTTACTCCCCTCCTCACTCTTCCTCCCTGTGCTGGACTCACCTTCAACTTCCTGGTGAGGAC
AGCAAGAGGAGCTGGCACTTGGTTGGGGGTAGAGTGTTGTTTTTTGTTTTGGAATAAACAGCTG
TTTTCCTGA

hide sequence

RefSeq Acc Id:

XM_017589753 ⟹ XP_017445242

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	78,022,684 - 78,041,748 (+)	NCBI
mRatBN7.2	1	68,993,900 - 69,012,943 (+)	NCBI
Rnor_6.0	1	72,545,413 - 72,564,513 (+)	NCBI

Sequence:

show sequence

TGGGGTGGGGGAGGCGCCTCTTCCAAGCTCCAAGCCGGCGCGAGACACAGGCGAGGGCTAGCGG
CGGCCACATCTGCACTGGGTGCCGGTGCGCATCTGCACAAGAAAGAACTGCCGGCCAGGGTCCC
CGCCACGCAGCCTGCCGCCCCCACCCCCATCAGCGCGCGCGCGCCCAGCCCCGCTGGCTGGCAG
ACACGCGCTCGCGCTGCCTACCCTGGCTGGCCCCCACGCTGCCACCCCCGATTCCCTGAAGGTC
CCGCATCCGGAAAGTGAGCCTGGCGTCCCGGTGTGCACCATGCCGGCCCTGCTGTTGATCGGGA
CCGTCGCGCTGCTAGCCTCCACCGCGGGCCCGGTGGGGGCGCGCCCATCCAACGACACAAGCGC
CGTGGCCCCGGGCCCGCTGCCCGCGCTACTCGCGCACCTGCGGCGCCTGACCGGGGCTCTGGCG
GGCGGCGGGAGCGCAGCGGGCGCCAACGCCAACGCCACCAAGACCAGCCCCGCGGGTGGCACGG
GTGCAGCGGCACGGGCGCCCCCTCCGGCCGAGCTCTGCCATGGCTACTACGATGTCATGGGCCA
GTACGACGCCACCTTCAACTGCAGCACCGGCTCCTACCGCTTCTGCTGTGGCACCTGCCACTAC
CGTTTCTGCTGCGAGCACCGCCACATGCGCCTGGCGCAGGCCTCCTGCTCCAACTACGACACAC
CACGCTGGGCCACCACGCCCCCGCCGCTGGCTGGAGGCGCCGGGGGCGCTGGGGGTGCGGGTGG
GGGGCCAGGGCCAGGCCAGGCAGGGTGGCTGGAAGGGGGCAGGGCCGGGGGCGCTGGGGGTCGT
GGGGGAGAGGGCCCAGGGGGCAGCACAGCCTACGTGGTGTGCGGAGTCATCAGTTTCGCTCTGG
CGGTGGGCGTCGGTGCCAAAGTGGCCTTCAGCAAGGCGTCACGTGCGCCCAGGGCGCACCGGGA
GATCAACGTGCCCAGAGCTCTGGTGGATATTCTCAGGCATCAAGCAGGACCTGCAACCCGCCCG
GACCGGGCCAGAAGCAGTTCTCTGACCCCAGGGCTGGGAGGCCCAGAGAGCATGGCCCCTAGGA
CGCCCAAGAACCTTTACAACACCATGAAGCCCTCCAACCTTGATAACCTGCACTACAACGTCAA
CAGTCCCAAGCACCGCGCCGCCACACTGGACTGGCGTGCTATGCCACCGCCCAGCCCTTCCCTG
CACTACTCTACGCTGTCCTGCTCTCGATCCTTCCACAACCTCTCTCATCTTCCCCCATCGTATG
AGGCGGCTGTGAAATCAGAATTGAATCGATACTCTTCCCTCAAGAGACTGGCTGAGAAAGATCT
GGATGAAGCCTACCTGAAGCGCAGACATCTAGAGATGCCACGTGGAACACTGCCTTTGCATGCA
CTCCGGCGGCCAGGCACTGGAGGTGGCTACCGCATGGATGGCTGGGGTGGCCCTGAGGAGCTGG
GCCTGGCACCGGCACCCAACCCCCGGCGGGTTATGTCCCAGGAGCACCTGCTGGGTGATGGCGG
CCGAGCTTCCCGCTATGAGTTCACATTGCCTCGAGCGCGCCTGGTGTCTCAAGAACACCTGCTG
CTATCCTCACCGGAGGCGCTTCGCCAGAGTCGCGAGCACCTGCTGTCACCCCCACGAAGTCCTG
CACTGCCCCCAGATCCCACCACCCGGGCCAGCCTGGCTGCCTCACACTCCAACCTGCTGCTGGG
GCCTGGGGGCCCCCCCACACCCCTGCATGGGTTGCCTCCATCAGGCCTGCATGCCCACCATCAC
CATGCCCTTCATGGCTCTCCTCAGCCAGCCTGGATGTCTGATGCGGGCGGGGGTGGGGGCACAC
TGGCCCGCAGGCCACCCTTTCAGCGCCAGGGAACCCTGGAGCAGCTGCAGTTCATTCCTGGGCA
CCACTTGCCCCAGCACCTGCGCACTGCCAGCAAGAACGAAGTGACTGTCTGAGGCCGGGTGAAG
TGCTGGGGGCTGTGGCTTCCGAGGCCCCCTTCTTCCAGCCCAGATCTCCATCACAGGCTTATCA
TACACACCAAGGGTCTGAGACCAGATGGGCCCTTGGACCGGAGACCACGCCTCCTTTTGGGATG
TTACAGTAGATGAGATCTCTCCTCCTACTTTGTCACTATTTGAACCAAGGCCTCCCTCCCATGA
TGTCATCCCAGAGGAAGGAGGCCTGTACATGAGGTCATTGCTAGCAAATATGTCTGTGTTTTAT
GATGTCATTGCAGGGACTAAACCTCCTTCCTATGAGGTCACCACAGAGGAAGAGCCCTGCCTAT
GAGGTCATCACTAGAGGTTATGTCGATTTTGCATGGCATCACCACAGAGACTCCTTTCCCGTGA
TGTCACCACAGACAATGCCTTGTCCCATCCTGTCATCCCTAGAAACAAAAATTTCTTCCTGAAG
TGTCACTACGGAGATAAGTCTCACACTTCTTGAGACTTGTTGACATCATCCTGACTGAGCGCCG
AGGCCTCTTGCAATTATCATCACGGGAAACATGTTTCTCTGCCGTGGAGAAGATGCCGCCGCCT
TTCCATGATGCCACCACAACAGACAAAGCCATTTTCCTGGGACACATTGCAGGGTACCATGCCC
TGCCAATTTTGTCCTCACTAAAGATTAGGCCTCCTTTCCACAATGCTGTCACGGGATTTTGCCT
CCCTCCTGTGATGCCATCACCAGAATAGGTGCCTTGCCCAATGTCGCCATCACAGGGACCGTGC
CTCTTCATGTGATGTCATTACCAATAATGACCACCTGTTCCTGGGACCTCTCCAGGGTGAGGCC
CTTCTGTGGTGTGGCCACCAGATAACACCCACTTGGAAATGACACCAGGAGACACCTCTATTTC
TCTGCCATGTCGTGAGAAAGTTGGGCATGTGTAGCCCAAGACCACCTGGGAAGAGGCCAGAGAA
AGTAGTCGGTCCTGAGATATAATATGAAGGGTGTCGGCACTAGGGATGCTAAGACAGAGATCTG
TCTGTAGGATGCTGGTGATGATGCCCTCCATTGCGTGGACATCATCATAGAGTGCTTCCATCTC
AGAGGTGGTCCCCACTCTAGATGACCAATAGTAGTGATTGCATAATGATTATGTCATCAGAGTC
CTTATCTTACTTCCCTATAACTAAGTCCGTGGCTTCTTCCCATGACCCCAGGGACATAGCCAAC
AGGATGTCTACTAGCCCCTCTAAAGGAACGTTGGGCCTGTGCAGTGAGTCCTTGGGGATGGCAC
CCATGGATGAGCTTCAGCTCCAAAGCCACTCTGACCCATGAGGCTTCTAAAGTCGTAGGACTCA
TAGGTGAGCCAAAGGGTGGCATCACTTCTTTCTGCCATATCTAAAGATATCAACTCTGTCAATA
GAGGCCCCATCTCTACTGGAGGGGGAGGGTTGGGGTAAATGTGCTGCTGACCTTACCAATGATA
TTACCATTGACACCCAGTGTCCTCCTTTCATAATGGCATAGCAGTCGGGGTCCAATGTTAACTG
TGTCATTTTCCAGGATTCCATAGGACTCACCTCAACTACCATATCATCTCCCAGGCATTATCAC
CATTAATGGTATCATCATTGTCTCCCAAGATTCCTCCCAACCATGGTGTTATCATCTCCCAGGG
TTCAAACAACATGTTGTCATGATGTCCCAGGATCCACAAGCTTGTTCTCATCGCTTCCCAGAAT
CCTTCACAACATGCTCACCTCATCACCTCCTGGGATCCATCACAGCCTGGGGGGTCTTTATCAT
CTCCCAGCCATCTCAACCATACAGTCCTCACCATCTCCCAGGATCCATCAGAACCATGCTGTCC
TTACCTCTCAGGAGCCAGTACAACCATGGTGTCCTTGTCTCCCAGGCTGTGCAATGGATAATGA
TGTCCTCATTTTCCAAAAATCCATTATGCCTCTCTACCAGGACTTGTTAGGACTGATGGAGCCA
GTGTTTCTCATAATTCCTTATAATTGCAGTGTCACCTCCCAGGATCCACTTTAACCATGTCTTC
ATGTTTCAGTAGCCACCACAGCTATGATGTCACCACTTCATAAAATCCATTCCAACTGTGGTGT
CCTTGTGTTGTTACATCCCAGGATCTATCTGATAATGTCACGAGTATCCTATATTCAATGAGAA
TCCATGAAAACCATCATTCTGTCACCTCCCTGGACCCATCAATTATGACCTATCATGACTCATT
GGGATTAACTGTTACCATGGTGCCATCACCTCCAAGCAGCCATAATAGCCAATGGTGTCTTCAT
TCCCCAGGACCCACTTTAACCCCAGTGTCTCCATGACTTAGGATTTCTGAAATCCAGTGATATC
ATCTCTCCAGTCTACCATAACCACAGTTGTCATCACCTTTTGGACCCATGACAGCAAATAATGT
CATCTTTTCCCAGAGTACGCTTCAGCCATGGTGCCATCCTCTCCCAGAATCCATGTAAAACTGT
GTGTCCTCATCTTCCAGGACCCATGGCAATTGTGTGCCATCTGCCAGGACCCACCATCTTAGGG
TCCAAATGCTGTGACAAGCTGTATTTCAATTGTCCTCTGGGGAACCAGCACAACAGGCCATTTC
CCATTCCCTCCAATGGACTGGGGTGGAGCCAGCTATCTCCCTCTGATAATGTCACCCTCTACTC
TGGCCCTTCTTAATCGTCACTGCCTCATTCCTGATCCAAATAGATATCTGGATCAGCTTCACCT
ACAGACTTGGCCTTGGCCAGCTTCCTTCCACTCACTGGTGAGTGCATCCAAACTCTTCTTGGAT
TACCACTGTCCCTTGCCCAGCCATCTGATCGGTGACAGGGTCATCTCTGTGACCTCTCCACAGC
AGCAACAGAGAGGGAGCTTCCCAGCCCTTAGATGGCATCACTGCCCTACCCAACTCCATCCCTG
GTACTTGGTCCCAACCAGGATCAGAACTTGCTAGCTTGGACCAAGCTCTCTTTAGAGAGGATGT
GTGAGGTGCCACAGCTGATAAACCACCTGATGGCCTAGTCCTGGGCTGGGTATATCCGAGAGCA
ATGGCCCCTGCTACCTTTACCTGAAAAGGCCAAGGGTGCTCCTTCGCCCCTTTCCCTAACATTC
CAGGGAGTACCCAGGGGCTTCAAGGAGTCCCTAATACCCAGTGCACAATCTTACCCTGCCACAT
CCAGTTCTCTGTACATATAGCCATGTTTCAGGGGGGCGGCCATTCCCCACTATTAAAGGGCTAC
ATGCCCCCCTCCCAGCCCCTAAGGCAAGGAGGGGGGCTCTTCTCCCTCCTCTGGGCCGCCCTCT
CCCTCTTATGCCTCCCTCCCCCACCAAATATTGGCCTCTGTGGCCATCCCTTCTTGCCCAGAGC
CTAGATGGGATAGATGGTGCCAGGCTCTCACCAAGCTGAGGATAGTAGGAGGTTACCACCAATC
TTCCTAAACTCCAGCACCAGGTTTTCTGTTTCCCAACTATAGATGCTCTGTGGGCTCCCCATCC
ATTCTAGGACCTCCCTTTAAGCGTGCTTAACACTCCCACGGAACACACAGCTTTTTTCAGCCCC
CAGCATTGGAGGGGTTCAGGAGCTTTCAGCTTTTGTTTGCCCGTTCTCTCCCTCCCTCTTTCCC
CCAACCTGAATTCCTTCCTGGGATCTGCCCTTACCCCAGCCTCTGCCCTCCACCTGCCTGACCC
TGGAGTCTTGACCTCTTATTTTAATAAAGCCATAGTGGGGAGAGGTCTTGAGGGTGGGCCAGCA
GGCCCTGTTCTGCTCATCCCCCACCATCACCACGATGCTTCCAGAGCTCCAGAGCGGGGACTTA
GCCTTCTGAGTCTTCCCCTCCCCTTCCCCTCTGCTCCCCAGTAAACACAAACACACATGGACAA
GGCATGCGCTGCCCTGAAGGAAAGCCCCCTTCTGGTTGGGGGCTGCAGAGGGGGTGTCAGAGAC
AAGATCAAAAGTGCCACACCAGAGGTTCCTCCACACCTCTGAACCCCATTCTTACTCCCCTCCT
CACTCTTCCTCCCTGTGCTGGACTCACCTTCAACTTCCTGGTGAGGACAGCAAGAGGAGCTGGC
ACTTGGTTGGGGGTAGAGTGTTGTTTTTTGTTTTGGAATAAACAGCTGTTTTCCTGA

hide sequence

RefSeq Acc Id:

XM_017589754 ⟹ XP_017445243

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	78,022,944 - 78,041,748 (+)	NCBI
mRatBN7.2	1	68,994,125 - 69,012,943 (+)	NCBI
Rnor_6.0	1	72,546,474 - 72,564,513 (+)	NCBI

Sequence:

show sequence

GATGGAGGGCCCAGAGAGATCGGGACAGAGTCCTAGACAGACGCAGAGATGCAGAGGATCAGAC
ACAGGGACCCGACGGCAGAGCCAGGTTAGAAAGAGAAAAGCCGGCTGGACGTAGGCACGGGTCC
TGAGAAGAAGGTGGACAGAGTCTTTAGGCAGGGACCCCTGACAGCCCAGACAAAGTACCGCTGC
ATGTGATATCCGCTCTACCCCTAGCAAGGATTTGGGGGATCTTTCCCCAGTGCTACCGTAGCCC
GGACCCGCTCCTCTCCTCTCCCTTCTTCTACAGGTCCCCAATCTTGCCTGCTTTCCGCATTCCT
ACCTCAAGTCATCTTTCTAATCCCTGAGACTCCTAGGAACCCCTTCCACATGCTCCTAACCCCT
TCCTTGATCTGCGCACCACCACCACCACCTCCGCAGCCGCCCCCTACAGACCCCACTCGGGCCA
TTTTAGAGGCTCAGGTCCTTTATTGGTTGTGCCCTCCCCATCTCTAGGTCTCACTTCTCTCACT
CTCTTTTACTTCCCCTCCTAATCCCAAGGCCTCTGTTTCTCTCTGTGTGTCTCTCTGTGTGTCT
CTCTGTCTCTGTCTCTCTCTGTCTGTCTTTGTCTACTTTTCATCACTACCCATCCTTCCGGTAC
CACCTTCTGTGGGTTTGTATCTCTTTCCTGGCTGATTATCTCTGTCTTCCTGTTTGCGTCTGCA
TTCCCCTTTTCCTGGATCCTGTTCCTCTGTCCCTTTCTCGCTTCTCCGCTTCTCCGGCACCCTC
ACCACGCCTCCCCCCACCTGCTGCTGTTCTCTGCAAGGACCCTCCGGAGGCATTCAGATCCACC
CAGCCCAGCCCACTTCTGACATCCTAGCCAGCATTCTCCACCCCCAGCTGGCAGGAATGGGATA
AGACTTGTTGGGGGCTTCCTTTTCCGAGCCTGGCTCCTTTTCTTTGTAACCACCTTGTGTCACT
CAAGTCCTGAACTGGATTTGAGAACCAAGCAAGGTGCAACCAAAGGAAGAACCGGGGTTTTGGG
CCTCCTTTCCCACCCACCCGCTCTGGCTGTGGAGGAGGACATTGCCTTTCCTCCCTTCGTAAAA
ACTTCTGTACGCCCCTCCTCCGTCCCCGCTAATTCTTTCTTTTCTCCTGCTGAGCCCTTCTCTC
GTCGCTCCCTTTGCCCTCCCCTCCCACCGCTGCAATTCGGCTCCGGGATCCGCAGCCTGGCGTC
CCGGTGTGCACCATGCCGGCCCTGCTGTTGATCGGGACCGTCGCGCTGCTAGCCTCCACCGCGG
GCCCGGTGGGGGCGCGCCCATCCAACGACACAAGCGCCGTGGCCCCGGGCCCGCTGCCCGCGCT
ACTCGCGCACCTGCGGCGCCTGACCGGGGCTCTGGCGGGCGGCGGGAGCGCAGCGGGCGCCAAC
GCCAACGCCACCAAGACCAGCCCCGCGGGTGGCACGGGTGCAGCGGCACGGGCGCCCCCTCCGG
CCGAGCTCTGCCATGGCTACTACGATGTCATGGGCCAGTACGACGCCACCTTCAACTGCAGCAC
CGGCTCCTACCGCTTCTGCTGTGGCACCTGCCACTACCGTTTCTGCTGCGAGCACCGCCACATG
CGCCTGGCGCAGGCCTCCTGCTCCAACTACGACACACCACGCTGGGCCACCACGCCCCCGCCGC
TGGCTGGAGGCGCCGGGGGCGCTGGGGGTGCGGGTGGGGGGCCAGGGCCAGGCCAGGCAGGGTG
GCTGGAAGGGGGCAGGGCCGGGGGCGCTGGGGGTCGTGGGGGAGAGGGCCCAGGGGGCAGCACA
GCCTACGTGGTGTGCGGAGTCATCAGTTTCGCTCTGGCGGTGGGCGTCGGTGCCAAAGTGGCCT
TCAGCAAGGCGTCACGTGCGCCCAGGGCGCACCGGGAGATCAACGTGCCCAGAGCTCTGGTGGA
TATTCTCAGGCATCAAGCAGGACCTGCAACCCGCCCGGACCGGGCCAGAAGCAGTTCTCTGACC
CCAGGGCTGGGAGGCCCAGAGAGCATGGCCCCTAGGACGCCCAAGAACCTTTACAACACCATGA
AGCCCTCCAACCTTGATAACCTGCACTACAACGTCAACAGTCCCAAGCACCGCGCCGCCACACT
GGACTGGCGTGCTATGCCACCGCCCAGCCCTTCCCTGCACTACTCTACGCTGTCCTGCTCTCGA
TCCTTCCACAACCTCTCTCATCTTCCCCCATCGTATGAGGCGGCTGTGAAATCAGAATTGAATC
GATACTCTTCCCTCAAGAGACTGGCTGAGAAAGATCTGGATGAAGCCTACCTGAAGCGCAGACA
TCTAGAGATGCCACGTGGAACACTGCCTTTGCATGCACTCCGGCGGCCAGGCACTGGAGGTGGC
TACCGCATGGATGGCTGGGGTGGCCCTGAGGAGCTGGGCCTGGCACCGGCACCCAACCCCCGGC
GGGTTATGTCCCAGGAGCACCTGCTGGGTGATGGCGGCCGAGCTTCCCGCTATGAGTTCACATT
GCCTCGAGCGCGCCTGGTGTCTCAAGAACACCTGCTGCTATCCTCACCGGAGGCGCTTCGCCAG
AGTCGCGAGCACCTGCTGTCACCCCCACGAAGTCCTGCACTGCCCCCAGATCCCACCACCCGGG
CCAGCCTGGCTGCCTCACACTCCAACCTGCTGCTGGGGCCTGGGGGCCCCCCCACACCCCTGCA
TGGGTTGCCTCCATCAGGCCTGCATGCCCACCATCACCATGCCCTTCATGGCTCTCCTCAGCCA
GCCTGGATGTCTGATGCGGGCGGGGGTGGGGGCACACTGGCCCGCAGGCCACCCTTTCAGCGCC
AGGGAACCCTGGAGCAGCTGCAGTTCATTCCTGGGCACCACTTGCCCCAGCACCTGCGCACTGC
CAGCAAGAACGAAGTGACTGTCTGAGGCCGGGTGAAGTGCTGGGGGCTGTGGCTTCCGAGGCCC
CCTTCTTCCAGCCCAGATCTCCATCACAGGCTTATCATACACACCAAGGGTCTGAGACCAGATG
GGCCCTTGGACCGGAGACCACGCCTCCTTTTGGGATGTTACAGTAGATGAGATCTCTCCTCCTA
CTTTGTCACTATTTGAACCAAGGCCTCCCTCCCATGATGTCATCCCAGAGGAAGGAGGCCTGTA
CATGAGGTCATTGCTAGCAAATATGTCTGTGTTTTATGATGTCATTGCAGGGACTAAACCTCCT
TCCTATGAGGTCACCACAGAGGAAGAGCCCTGCCTATGAGGTCATCACTAGAGGTTATGTCGAT
TTTGCATGGCATCACCACAGAGACTCCTTTCCCGTGATGTCACCACAGACAATGCCTTGTCCCA
TCCTGTCATCCCTAGAAACAAAAATTTCTTCCTGAAGTGTCACTACGGAGATAAGTCTCACACT
TCTTGAGACTTGTTGACATCATCCTGACTGAGCGCCGAGGCCTCTTGCAATTATCATCACGGGA
AACATGTTTCTCTGCCGTGGAGAAGATGCCGCCGCCTTTCCATGATGCCACCACAACAGACAAA
GCCATTTTCCTGGGACACATTGCAGGGTACCATGCCCTGCCAATTTTGTCCTCACTAAAGATTA
GGCCTCCTTTCCACAATGCTGTCACGGGATTTTGCCTCCCTCCTGTGATGCCATCACCAGAATA
GGTGCCTTGCCCAATGTCGCCATCACAGGGACCGTGCCTCTTCATGTGATGTCATTACCAATAA
TGACCACCTGTTCCTGGGACCTCTCCAGGGTGAGGCCCTTCTGTGGTGTGGCCACCAGATAACA
CCCACTTGGAAATGACACCAGGAGACACCTCTATTTCTCTGCCATGTCGTGAGAAAGTTGGGCA
TGTGTAGCCCAAGACCACCTGGGAAGAGGCCAGAGAAAGTAGTCGGTCCTGAGATATAATATGA
AGGGTGTCGGCACTAGGGATGCTAAGACAGAGATCTGTCTGTAGGATGCTGGTGATGATGCCCT
CCATTGCGTGGACATCATCATAGAGTGCTTCCATCTCAGAGGTGGTCCCCACTCTAGATGACCA
ATAGTAGTGATTGCATAATGATTATGTCATCAGAGTCCTTATCTTACTTCCCTATAACTAAGTC
CGTGGCTTCTTCCCATGACCCCAGGGACATAGCCAACAGGATGTCTACTAGCCCCTCTAAAGGA
ACGTTGGGCCTGTGCAGTGAGTCCTTGGGGATGGCACCCATGGATGAGCTTCAGCTCCAAAGCC
ACTCTGACCCATGAGGCTTCTAAAGTCGTAGGACTCATAGGTGAGCCAAAGGGTGGCATCACTT
CTTTCTGCCATATCTAAAGATATCAACTCTGTCAATAGAGGCCCCATCTCTACTGGAGGGGGAG
GGTTGGGGTAAATGTGCTGCTGACCTTACCAATGATATTACCATTGACACCCAGTGTCCTCCTT
TCATAATGGCATAGCAGTCGGGGTCCAATGTTAACTGTGTCATTTTCCAGGATTCCATAGGACT
CACCTCAACTACCATATCATCTCCCAGGCATTATCACCATTAATGGTATCATCATTGTCTCCCA
AGATTCCTCCCAACCATGGTGTTATCATCTCCCAGGGTTCAAACAACATGTTGTCATGATGTCC
CAGGATCCACAAGCTTGTTCTCATCGCTTCCCAGAATCCTTCACAACATGCTCACCTCATCACC
TCCTGGGATCCATCACAGCCTGGGGGGTCTTTATCATCTCCCAGCCATCTCAACCATACAGTCC
TCACCATCTCCCAGGATCCATCAGAACCATGCTGTCCTTACCTCTCAGGAGCCAGTACAACCAT
GGTGTCCTTGTCTCCCAGGCTGTGCAATGGATAATGATGTCCTCATTTTCCAAAAATCCATTAT
GCCTCTCTACCAGGACTTGTTAGGACTGATGGAGCCAGTGTTTCTCATAATTCCTTATAATTGC
AGTGTCACCTCCCAGGATCCACTTTAACCATGTCTTCATGTTTCAGTAGCCACCACAGCTATGA
TGTCACCACTTCATAAAATCCATTCCAACTGTGGTGTCCTTGTGTTGTTACATCCCAGGATCTA
TCTGATAATGTCACGAGTATCCTATATTCAATGAGAATCCATGAAAACCATCATTCTGTCACCT
CCCTGGACCCATCAATTATGACCTATCATGACTCATTGGGATTAACTGTTACCATGGTGCCATC
ACCTCCAAGCAGCCATAATAGCCAATGGTGTCTTCATTCCCCAGGACCCACTTTAACCCCAGTG
TCTCCATGACTTAGGATTTCTGAAATCCAGTGATATCATCTCTCCAGTCTACCATAACCACAGT
TGTCATCACCTTTTGGACCCATGACAGCAAATAATGTCATCTTTTCCCAGAGTACGCTTCAGCC
ATGGTGCCATCCTCTCCCAGAATCCATGTAAAACTGTGTGTCCTCATCTTCCAGGACCCATGGC
AATTGTGTGCCATCTGCCAGGACCCACCATCTTAGGGTCCAAATGCTGTGACAAGCTGTATTTC
AATTGTCCTCTGGGGAACCAGCACAACAGGCCATTTCCCATTCCCTCCAATGGACTGGGGTGGA
GCCAGCTATCTCCCTCTGATAATGTCACCCTCTACTCTGGCCCTTCTTAATCGTCACTGCCTCA
TTCCTGATCCAAATAGATATCTGGATCAGCTTCACCTACAGACTTGGCCTTGGCCAGCTTCCTT
CCACTCACTGGTGAGTGCATCCAAACTCTTCTTGGATTACCACTGTCCCTTGCCCAGCCATCTG
ATCGGTGACAGGGTCATCTCTGTGACCTCTCCACAGCAGCAACAGAGAGGGAGCTTCCCAGCCC
TTAGATGGCATCACTGCCCTACCCAACTCCATCCCTGGTACTTGGTCCCAACCAGGATCAGAAC
TTGCTAGCTTGGACCAAGCTCTCTTTAGAGAGGATGTGTGAGGTGCCACAGCTGATAAACCACC
TGATGGCCTAGTCCTGGGCTGGGTATATCCGAGAGCAATGGCCCCTGCTACCTTTACCTGAAAA
GGCCAAGGGTGCTCCTTCGCCCCTTTCCCTAACATTCCAGGGAGTACCCAGGGGCTTCAAGGAG
TCCCTAATACCCAGTGCACAATCTTACCCTGCCACATCCAGTTCTCTGTACATATAGCCATGTT
TCAGGGGGGCGGCCATTCCCCACTATTAAAGGGCTACATGCCCCCCTCCCAGCCCCTAAGGCAA
GGAGGGGGGCTCTTCTCCCTCCTCTGGGCCGCCCTCTCCCTCTTATGCCTCCCTCCCCCACCAA
ATATTGGCCTCTGTGGCCATCCCTTCTTGCCCAGAGCCTAGATGGGATAGATGGTGCCAGGCTC
TCACCAAGCTGAGGATAGTAGGAGGTTACCACCAATCTTCCTAAACTCCAGCACCAGGTTTTCT
GTTTCCCAACTATAGATGCTCTGTGGGCTCCCCATCCATTCTAGGACCTCCCTTTAAGCGTGCT
TAACACTCCCACGGAACACACAGCTTTTTTCAGCCCCCAGCATTGGAGGGGTTCAGGAGCTTTC
AGCTTTTGTTTGCCCGTTCTCTCCCTCCCTCTTTCCCCCAACCTGAATTCCTTCCTGGGATCTG
CCCTTACCCCAGCCTCTGCCCTCCACCTGCCTGACCCTGGAGTCTTGACCTCTTATTTTAATAA
AGCCATAGTGGGGAGAGGTCTTGAGGGTGGGCCAGCAGGCCCTGTTCTGCTCATCCCCCACCAT
CACCACGATGCTTCCAGAGCTCCAGAGCGGGGACTTAGCCTTCTGAGTCTTCCCCTCCCCTTCC
CCTCTGCTCCCCAGTAAACACAAACACACATGGACAAGGCATGCGCTGCCCTGAAGGAAAGCCC
CCTTCTGGTTGGGGGCTGCAGAGGGGGTGTCAGAGACAAGATCAAAAGTGCCACACCAGAGGTT
CCTCCACACCTCTGAACCCCATTCTTACTCCCCTCCTCACTCTTCCTCCCTGTGCTGGACTCAC
CTTCAACTTCCTGGTGAGGACAGCAAGAGGAGCTGGCACTTGGTTGGGGGTAGAGTGTTGTTTT
TTGTTTTGGAATAAACAGCTGTTTTCCTGA

hide sequence

RefSeq Acc Id:

XM_017589755 ⟹ XP_017445244

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	78,028,517 - 78,041,748 (+)	NCBI
mRatBN7.2	1	68,999,740 - 69,012,943 (+)	NCBI
Rnor_6.0	1	72,551,755 - 72,564,513 (+)	NCBI

Sequence:

show sequence

TGCTGTGTTAGATCCCTATGACTGTCACTACTCAATGTTTCTCCTCAGCAGTCTGAAACACATG
TGACATTTTTGTCTAGCACCTCCGTCCTCTCCCTGGAAGGTCCACCTCAGACCCACAGGAATCT
GTGGGTTTATTCAAGGCTGCATTCTTGATGTTCCTGACACCCCAAGGGTTGCTTCCAGAAGGAG
TCTTGCCTTACACACTGGGCACAGCCTTTGCACCAAGCCTCTGAACAGCTGTCTCTCTGGGCCT
TGTCAAGATGCCCTTTGAGAAGAGGGGGAGCCTCTGAGAGGAAACACCTTGAGTCTGCCTCTGC
TTTCCTCCCTTCGTAAAAACTTCTGTACGCCCCTCCTCCGTCCCCGCTAATTCTTTCTTTTCTC
CTGCTGAGCCCTTCTCTCGTCGCTCCCTTTGCCCTCCCCTCCCACCGCTGCAATTCGGCTCCGG
GATCCGCAGCCTGGCGTCCCGGTGTGCACCATGCCGGCCCTGCTGTTGATCGGGACCGTCGCGC
TGCTAGCCTCCACCGCGGGCCCGGTGGGGGCGCGCCCATCCAACGACACAAGCGCCGTGGCCCC
GGGCCCGCTGCCCGCGCTACTCGCGCACCTGCGGCGCCTGACCGGGGCTCTGGCGGGCGGCGGG
AGCGCAGCGGGCGCCAACGCCAACGCCACCAAGACCAGCCCCGCGGGTGGCACGGGTGCAGCGG
CACGGGCGCCCCCTCCGGCCGAGCTCTGCCATGGCTACTACGATGTCATGGGCCAGTACGACGC
CACCTTCAACTGCAGCACCGGCTCCTACCGCTTCTGCTGTGGCACCTGCCACTACCGTTTCTGC
TGCGAGCACCGCCACATGCGCCTGGCGCAGGCCTCCTGCTCCAACTACGACACACCACGCTGGG
CCACCACGCCCCCGCCGCTGGCTGGAGGCGCCGGGGGCGCTGGGGGTGCGGGTGGGGGGCCAGG
GCCAGGCCAGGCAGGGTGGCTGGAAGGGGGCAGGGCCGGGGGCGCTGGGGGTCGTGGGGGAGAG
GGCCCAGGGGGCAGCACAGCCTACGTGGTGTGCGGAGTCATCAGTTTCGCTCTGGCGGTGGGCG
TCGGTGCCAAAGTGGCCTTCAGCAAGGCGTCACGTGCGCCCAGGGCGCACCGGGAGATCAACGT
GCCCAGAGCTCTGGTGGATATTCTCAGGCATCAAGCAGGACCTGCAACCCGCCCGGACCGGGCC
AGAAGCAGTTCTCTGACCCCAGGGCTGGGAGGCCCAGAGAGCATGGCCCCTAGGACGCCCAAGA
ACCTTTACAACACCATGAAGCCCTCCAACCTTGATAACCTGCACTACAACGTCAACAGTCCCAA
GCACCGCGCCGCCACACTGGACTGGCGTGCTATGCCACCGCCCAGCCCTTCCCTGCACTACTCT
ACGCTGTCCTGCTCTCGATCCTTCCACAACCTCTCTCATCTTCCCCCATCGTATGAGGCGGCTG
TGAAATCAGAATTGAATCGATACTCTTCCCTCAAGAGACTGGCTGAGAAAGATCTGGATGAAGC
CTACCTGAAGCGCAGACATCTAGAGATGCCACGTGGAACACTGCCTTTGCATGCACTCCGGCGG
CCAGGCACTGGAGGTGGCTACCGCATGGATGGCTGGGGTGGCCCTGAGGAGCTGGGCCTGGCAC
CGGCACCCAACCCCCGGCGGGTTATGTCCCAGGAGCACCTGCTGGGTGATGGCGGCCGAGCTTC
CCGCTATGAGTTCACATTGCCTCGAGCGCGCCTGGTGTCTCAAGAACACCTGCTGCTATCCTCA
CCGGAGGCGCTTCGCCAGAGTCGCGAGCACCTGCTGTCACCCCCACGAAGTCCTGCACTGCCCC
CAGATCCCACCACCCGGGCCAGCCTGGCTGCCTCACACTCCAACCTGCTGCTGGGGCCTGGGGG
CCCCCCCACACCCCTGCATGGGTTGCCTCCATCAGGCCTGCATGCCCACCATCACCATGCCCTT
CATGGCTCTCCTCAGCCAGCCTGGATGTCTGATGCGGGCGGGGGTGGGGGCACACTGGCCCGCA
GGCCACCCTTTCAGCGCCAGGGAACCCTGGAGCAGCTGCAGTTCATTCCTGGGCACCACTTGCC
CCAGCACCTGCGCACTGCCAGCAAGAACGAAGTGACTGTCTGAGGCCGGGTGAAGTGCTGGGGG
CTGTGGCTTCCGAGGCCCCCTTCTTCCAGCCCAGATCTCCATCACAGGCTTATCATACACACCA
AGGGTCTGAGACCAGATGGGCCCTTGGACCGGAGACCACGCCTCCTTTTGGGATGTTACAGTAG
ATGAGATCTCTCCTCCTACTTTGTCACTATTTGAACCAAGGCCTCCCTCCCATGATGTCATCCC
AGAGGAAGGAGGCCTGTACATGAGGTCATTGCTAGCAAATATGTCTGTGTTTTATGATGTCATT
GCAGGGACTAAACCTCCTTCCTATGAGGTCACCACAGAGGAAGAGCCCTGCCTATGAGGTCATC
ACTAGAGGTTATGTCGATTTTGCATGGCATCACCACAGAGACTCCTTTCCCGTGATGTCACCAC
AGACAATGCCTTGTCCCATCCTGTCATCCCTAGAAACAAAAATTTCTTCCTGAAGTGTCACTAC
GGAGATAAGTCTCACACTTCTTGAGACTTGTTGACATCATCCTGACTGAGCGCCGAGGCCTCTT
GCAATTATCATCACGGGAAACATGTTTCTCTGCCGTGGAGAAGATGCCGCCGCCTTTCCATGAT
GCCACCACAACAGACAAAGCCATTTTCCTGGGACACATTGCAGGGTACCATGCCCTGCCAATTT
TGTCCTCACTAAAGATTAGGCCTCCTTTCCACAATGCTGTCACGGGATTTTGCCTCCCTCCTGT
GATGCCATCACCAGAATAGGTGCCTTGCCCAATGTCGCCATCACAGGGACCGTGCCTCTTCATG
TGATGTCATTACCAATAATGACCACCTGTTCCTGGGACCTCTCCAGGGTGAGGCCCTTCTGTGG
TGTGGCCACCAGATAACACCCACTTGGAAATGACACCAGGAGACACCTCTATTTCTCTGCCATG
TCGTGAGAAAGTTGGGCATGTGTAGCCCAAGACCACCTGGGAAGAGGCCAGAGAAAGTAGTCGG
TCCTGAGATATAATATGAAGGGTGTCGGCACTAGGGATGCTAAGACAGAGATCTGTCTGTAGGA
TGCTGGTGATGATGCCCTCCATTGCGTGGACATCATCATAGAGTGCTTCCATCTCAGAGGTGGT
CCCCACTCTAGATGACCAATAGTAGTGATTGCATAATGATTATGTCATCAGAGTCCTTATCTTA
CTTCCCTATAACTAAGTCCGTGGCTTCTTCCCATGACCCCAGGGACATAGCCAACAGGATGTCT
ACTAGCCCCTCTAAAGGAACGTTGGGCCTGTGCAGTGAGTCCTTGGGGATGGCACCCATGGATG
AGCTTCAGCTCCAAAGCCACTCTGACCCATGAGGCTTCTAAAGTCGTAGGACTCATAGGTGAGC
CAAAGGGTGGCATCACTTCTTTCTGCCATATCTAAAGATATCAACTCTGTCAATAGAGGCCCCA
TCTCTACTGGAGGGGGAGGGTTGGGGTAAATGTGCTGCTGACCTTACCAATGATATTACCATTG
ACACCCAGTGTCCTCCTTTCATAATGGCATAGCAGTCGGGGTCCAATGTTAACTGTGTCATTTT
CCAGGATTCCATAGGACTCACCTCAACTACCATATCATCTCCCAGGCATTATCACCATTAATGG
TATCATCATTGTCTCCCAAGATTCCTCCCAACCATGGTGTTATCATCTCCCAGGGTTCAAACAA
CATGTTGTCATGATGTCCCAGGATCCACAAGCTTGTTCTCATCGCTTCCCAGAATCCTTCACAA
CATGCTCACCTCATCACCTCCTGGGATCCATCACAGCCTGGGGGGTCTTTATCATCTCCCAGCC
ATCTCAACCATACAGTCCTCACCATCTCCCAGGATCCATCAGAACCATGCTGTCCTTACCTCTC
AGGAGCCAGTACAACCATGGTGTCCTTGTCTCCCAGGCTGTGCAATGGATAATGATGTCCTCAT
TTTCCAAAAATCCATTATGCCTCTCTACCAGGACTTGTTAGGACTGATGGAGCCAGTGTTTCTC
ATAATTCCTTATAATTGCAGTGTCACCTCCCAGGATCCACTTTAACCATGTCTTCATGTTTCAG
TAGCCACCACAGCTATGATGTCACCACTTCATAAAATCCATTCCAACTGTGGTGTCCTTGTGTT
GTTACATCCCAGGATCTATCTGATAATGTCACGAGTATCCTATATTCAATGAGAATCCATGAAA
ACCATCATTCTGTCACCTCCCTGGACCCATCAATTATGACCTATCATGACTCATTGGGATTAAC
TGTTACCATGGTGCCATCACCTCCAAGCAGCCATAATAGCCAATGGTGTCTTCATTCCCCAGGA
CCCACTTTAACCCCAGTGTCTCCATGACTTAGGATTTCTGAAATCCAGTGATATCATCTCTCCA
GTCTACCATAACCACAGTTGTCATCACCTTTTGGACCCATGACAGCAAATAATGTCATCTTTTC
CCAGAGTACGCTTCAGCCATGGTGCCATCCTCTCCCAGAATCCATGTAAAACTGTGTGTCCTCA
TCTTCCAGGACCCATGGCAATTGTGTGCCATCTGCCAGGACCCACCATCTTAGGGTCCAAATGC
TGTGACAAGCTGTATTTCAATTGTCCTCTGGGGAACCAGCACAACAGGCCATTTCCCATTCCCT
CCAATGGACTGGGGTGGAGCCAGCTATCTCCCTCTGATAATGTCACCCTCTACTCTGGCCCTTC
TTAATCGTCACTGCCTCATTCCTGATCCAAATAGATATCTGGATCAGCTTCACCTACAGACTTG
GCCTTGGCCAGCTTCCTTCCACTCACTGGTGAGTGCATCCAAACTCTTCTTGGATTACCACTGT
CCCTTGCCCAGCCATCTGATCGGTGACAGGGTCATCTCTGTGACCTCTCCACAGCAGCAACAGA
GAGGGAGCTTCCCAGCCCTTAGATGGCATCACTGCCCTACCCAACTCCATCCCTGGTACTTGGT
CCCAACCAGGATCAGAACTTGCTAGCTTGGACCAAGCTCTCTTTAGAGAGGATGTGTGAGGTGC
CACAGCTGATAAACCACCTGATGGCCTAGTCCTGGGCTGGGTATATCCGAGAGCAATGGCCCCT
GCTACCTTTACCTGAAAAGGCCAAGGGTGCTCCTTCGCCCCTTTCCCTAACATTCCAGGGAGTA
CCCAGGGGCTTCAAGGAGTCCCTAATACCCAGTGCACAATCTTACCCTGCCACATCCAGTTCTC
TGTACATATAGCCATGTTTCAGGGGGGCGGCCATTCCCCACTATTAAAGGGCTACATGCCCCCC
TCCCAGCCCCTAAGGCAAGGAGGGGGGCTCTTCTCCCTCCTCTGGGCCGCCCTCTCCCTCTTAT
GCCTCCCTCCCCCACCAAATATTGGCCTCTGTGGCCATCCCTTCTTGCCCAGAGCCTAGATGGG
ATAGATGGTGCCAGGCTCTCACCAAGCTGAGGATAGTAGGAGGTTACCACCAATCTTCCTAAAC
TCCAGCACCAGGTTTTCTGTTTCCCAACTATAGATGCTCTGTGGGCTCCCCATCCATTCTAGGA
CCTCCCTTTAAGCGTGCTTAACACTCCCACGGAACACACAGCTTTTTTCAGCCCCCAGCATTGG
AGGGGTTCAGGAGCTTTCAGCTTTTGTTTGCCCGTTCTCTCCCTCCCTCTTTCCCCCAACCTGA
ATTCCTTCCTGGGATCTGCCCTTACCCCAGCCTCTGCCCTCCACCTGCCTGACCCTGGAGTCTT
GACCTCTTATTTTAATAAAGCCATAGTGGGGAGAGGTCTTGAGGGTGGGCCAGCAGGCCCTGTT
CTGCTCATCCCCCACCATCACCACGATGCTTCCAGAGCTCCAGAGCGGGGACTTAGCCTTCTGA
GTCTTCCCCTCCCCTTCCCCTCTGCTCCCCAGTAAACACAAACACACATGGACAAGGCATGCGC
TGCCCTGAAGGAAAGCCCCCTTCTGGTTGGGGGCTGCAGAGGGGGTGTCAGAGACAAGATCAAA
AGTGCCACACCAGAGGTTCCTCCACACCTCTGAACCCCATTCTTACTCCCCTCCTCACTCTTCC
TCCCTGTGCTGGACTCACCTTCAACTTCCTGGTGAGGACAGCAAGAGGAGCTGGCACTTGGTTG
GGGGTAGAGTGTTGTTTTTTGTTTTGGAATAAACAGCTGTTTTCCTGA

hide sequence

RefSeq Acc Id:

XM_039091559 ⟹ XP_038947487

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	78,022,943 - 78,041,748 (+)	NCBI
mRatBN7.2	1	68,994,125 - 69,012,943 (+)	NCBI

RefSeq Acc Id:

XM_039091565 ⟹ XP_038947493

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	78,022,689 - 78,041,748 (+)	NCBI
mRatBN7.2	1	68,993,900 - 69,012,943 (+)	NCBI

RefSeq Acc Id:

XM_063274859 ⟹ XP_063130929

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	78,022,680 - 78,041,748 (+)	NCBI

RefSeq Acc Id:

XM_063274863 ⟹ XP_063130933

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	78,031,243 - 78,041,748 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001138647	(Get FASTA)	NCBI Sequence Viewer
	XP_017445242	(Get FASTA)	NCBI Sequence Viewer
	XP_017445243	(Get FASTA)	NCBI Sequence Viewer
	XP_017445244	(Get FASTA)	NCBI Sequence Viewer
	XP_038947487	(Get FASTA)	NCBI Sequence Viewer
	XP_038947493	(Get FASTA)	NCBI Sequence Viewer
	XP_063130929	(Get FASTA)	NCBI Sequence Viewer
	XP_063130933	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000022698
	ENSRNOP00000022698.3
	ENSRNOP00000094674
	ENSRNOP00000094674.1
	ENSRNOP00000108986
	ENSRNOP00000108986.1

RefSeq Acc Id:	NP_001138647 ⟸ NM_001145175
- Peptide Label:	precursor
- UniProtKB:	D3ZPJ0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPALLLIGTVALLASTAGPVGARPSNDTSAVAPGPLPALLAHLRRLTGALAGGGSAAGANANAT KTSPAGGTGAAARAPPPAELCHGYYDVMGQYDATFNCSTGSYRFCCGTCHYRFCCEHRHMRLAQ ASCSNYDTPRWATTPPPLAGGAGGAGGAGGGPGPGQAGWLEGGRAGGAGGRGGEGPGGSTAYVV CGVISFALAVGVGAKVAFSKASRAPRAHREINVPRALVDILRHQAGPATRPDRARSSSLTPGLG GPESMAPRTPKNLYNTMKPSNLDNLHYNVNSPKHRAATLDWRAMPPPSPSLHYSTLSCSRSFHN LSHLPPSYEAAVKSELNRYSSLKRLAEKDLDEAYLKRRHLEMPRGTLPLHALRRPGTGGGYRMD GWGGPEELGLAPAPNPRRVMSQEHLLGDGGRASRYEFTLPRARLVSQEHLLLSSPEALRQSREH LLSPPRSPALPPDPTTRASLAASHSNLLLGPGGPPTPLHGLPPSGLHAHHHHALHGSPQPAWMS DAGGGGGTLARRPPFQRQGTLEQLQFIPGHHLPQHLRTASKNEVTV hide sequence

RefSeq Acc Id:	XP_017445242 ⟸ XM_017589753
- Peptide Label:	isoform X1
- UniProtKB:	D3ZPJ0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPALLLIGTVALLASTAGPVGARPSNDTSAVAPGPLPALLAHLRRLTGALAGGGSAAGANANAT KTSPAGGTGAAARAPPPAELCHGYYDVMGQYDATFNCSTGSYRFCCGTCHYRFCCEHRHMRLAQ ASCSNYDTPRWATTPPPLAGGAGGAGGAGGGPGPGQAGWLEGGRAGGAGGRGGEGPGGSTAYVV CGVISFALAVGVGAKVAFSKASRAPRAHREINVPRALVDILRHQAGPATRPDRARSSSLTPGLG GPESMAPRTPKNLYNTMKPSNLDNLHYNVNSPKHRAATLDWRAMPPPSPSLHYSTLSCSRSFHN LSHLPPSYEAAVKSELNRYSSLKRLAEKDLDEAYLKRRHLEMPRGTLPLHALRRPGTGGGYRMD GWGGPEELGLAPAPNPRRVMSQEHLLGDGGRASRYEFTLPRARLVSQEHLLLSSPEALRQSREH LLSPPRSPALPPDPTTRASLAASHSNLLLGPGGPPTPLHGLPPSGLHAHHHHALHGSPQPAWMS DAGGGGGTLARRPPFQRQGTLEQLQFIPGHHLPQHLRTASKNEVTV hide sequence

RefSeq Acc Id:	XP_017445243 ⟸ XM_017589754
- Peptide Label:	isoform X1
- UniProtKB:	D3ZPJ0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPALLLIGTVALLASTAGPVGARPSNDTSAVAPGPLPALLAHLRRLTGALAGGGSAAGANANAT KTSPAGGTGAAARAPPPAELCHGYYDVMGQYDATFNCSTGSYRFCCGTCHYRFCCEHRHMRLAQ ASCSNYDTPRWATTPPPLAGGAGGAGGAGGGPGPGQAGWLEGGRAGGAGGRGGEGPGGSTAYVV CGVISFALAVGVGAKVAFSKASRAPRAHREINVPRALVDILRHQAGPATRPDRARSSSLTPGLG GPESMAPRTPKNLYNTMKPSNLDNLHYNVNSPKHRAATLDWRAMPPPSPSLHYSTLSCSRSFHN LSHLPPSYEAAVKSELNRYSSLKRLAEKDLDEAYLKRRHLEMPRGTLPLHALRRPGTGGGYRMD GWGGPEELGLAPAPNPRRVMSQEHLLGDGGRASRYEFTLPRARLVSQEHLLLSSPEALRQSREH LLSPPRSPALPPDPTTRASLAASHSNLLLGPGGPPTPLHGLPPSGLHAHHHHALHGSPQPAWMS DAGGGGGTLARRPPFQRQGTLEQLQFIPGHHLPQHLRTASKNEVTV hide sequence

RefSeq Acc Id:	XP_017445244 ⟸ XM_017589755
- Peptide Label:	isoform X1
- UniProtKB:	D3ZPJ0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPALLLIGTVALLASTAGPVGARPSNDTSAVAPGPLPALLAHLRRLTGALAGGGSAAGANANAT KTSPAGGTGAAARAPPPAELCHGYYDVMGQYDATFNCSTGSYRFCCGTCHYRFCCEHRHMRLAQ ASCSNYDTPRWATTPPPLAGGAGGAGGAGGGPGPGQAGWLEGGRAGGAGGRGGEGPGGSTAYVV CGVISFALAVGVGAKVAFSKASRAPRAHREINVPRALVDILRHQAGPATRPDRARSSSLTPGLG GPESMAPRTPKNLYNTMKPSNLDNLHYNVNSPKHRAATLDWRAMPPPSPSLHYSTLSCSRSFHN LSHLPPSYEAAVKSELNRYSSLKRLAEKDLDEAYLKRRHLEMPRGTLPLHALRRPGTGGGYRMD GWGGPEELGLAPAPNPRRVMSQEHLLGDGGRASRYEFTLPRARLVSQEHLLLSSPEALRQSREH LLSPPRSPALPPDPTTRASLAASHSNLLLGPGGPPTPLHGLPPSGLHAHHHHALHGSPQPAWMS DAGGGGGTLARRPPFQRQGTLEQLQFIPGHHLPQHLRTASKNEVTV hide sequence

Ensembl Acc Id:

ENSRNOP00000022698 ⟸ ENSRNOT00000022698

RefSeq Acc Id:	XP_038947493 ⟸ XM_039091565
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6ANL3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038947487 ⟸ XM_039091559
- Peptide Label:	isoform X1
- UniProtKB:	D3ZPJ0 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000094674 ⟸ ENSRNOT00000114646

RefSeq Acc Id:	XP_063130929 ⟸ XM_063274859
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063130933 ⟸ XM_063274863
- Peptide Label:	isoform X4
- UniProtKB:	A6KNP6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000108986 ⟸ ENSRNOT00000161994

Protein Domains

Shisa N-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZPJ0-F1-model_v2	AlphaFold	D3ZPJ0	1-558	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1583944	AgrOrtholog
BioCyc Gene	G2FUF-60864	BioCyc
Ensembl Genes	ENSRNOG00000016877	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000022698	ENTREZGENE
	ENSRNOT00000022698.5	UniProtKB/TrEMBL
	ENSRNOT00000114646	ENTREZGENE
	ENSRNOT00000114646.2	UniProtKB/TrEMBL
	ENSRNOT00000161994	ENTREZGENE
	ENSRNOT00000161994.1	UniProtKB/TrEMBL
InterPro	Shisa	UniProtKB/TrEMBL
	Shisa_N	UniProtKB/TrEMBL
KEGG Report	rno:691429	UniProtKB/TrEMBL
NCBI Gene	691429	ENTREZGENE
PANTHER	PROTEIN SHISA-7	UniProtKB/TrEMBL
	PTHR31774	UniProtKB/TrEMBL
Pfam	Shisa	UniProtKB/TrEMBL
PhenoGen	Shisa7	PhenoGen
RatGTEx	ENSRNOG00000016877	RatGTEx
UniProt	A0A8I6ANL3	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LUR1_RAT	UniProtKB/TrEMBL
	A6KNP6	ENTREZGENE, UniProtKB/TrEMBL
	D3ZPJ0	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-08-07	Shisa7	shisa family member 7	Shisa7	shisa homolog 7 (Xenopus laevis)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2013-05-24	Shisa7	shisa homolog 7 (Xenopus laevis)	LOC684757	hypothetical protein LOC684757	Data merged from RGD:1586736	1643240	APPROVED
2010-04-23	Shisa7	shisa homolog 7 (Xenopus laevis)	LOC691429	hypothetical protein LOC691429	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-11-19	LOC691429	hypothetical protein LOC691429			Symbol and Name status set to provisional	70820	PROVISIONAL
2006-11-19	LOC684757	hypothetical protein LOC684757			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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