Trappc12 (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 6 | 51,049,878 - 51,115,343 (-) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 6 | 51,049,878 - 51,115,297 (-) | Ensembl | | | | GRCr8 | mRatBN7.2 | 6 | 45,321,496 - 45,386,967 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 45,321,497 - 45,386,952 (-) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 6 | 45,613,129 - 45,685,345 (-) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 45,927,996 - 46,000,209 (-) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 45,364,864 - 45,437,076 (-) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 47,954,822 - 48,020,280 (-) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 47,955,310 - 48,020,271 (-) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 56,656,858 - 56,722,308 (-) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 6 | 46,567,200 - 46,632,324 (-) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 6 | 44,544,476 - 44,609,939 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | q16 | NCBI | | | | |
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TRAPPC12 (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 2 | 3,379,694 - 3,479,565 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 3,379,674 - 3,485,094 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 2 | 3,383,465 - 3,483,336 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 3,362,453 - 3,462,349 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 2 | 4,921,728 - 5,021,625 | NCBI | | | | | Celera | 2 | 3,434,749 - 3,536,856 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | p25.3 | NCBI | | | | | HuRef | 2 | 3,369,367 - 3,470,799 (+) | NCBI | | HuRef | | | CHM1_1 | 2 | 3,312,833 - 3,411,959 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 3,401,815 - 3,501,615 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Trappc12 (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 12 | 28,740,619 - 28,801,746 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 12 | 28,740,627 - 28,800,471 (-) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 12 | 28,690,620 - 28,750,485 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 12 | 28,690,628 - 28,750,472 (-) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 12 | 29,375,493 - 29,435,318 (-) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 12 | 29,277,283 - 29,336,650 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 12 | 30,183,651 - 30,243,945 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | A2 | NCBI | | | | | cM Map | 12 | 11.1 | NCBI | | | | |
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Trappc12 (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955487 | 3,824,872 - 3,864,331 (-) | Ensembl | | | | | ChiLan1.0 | NW_004955487 | 3,824,872 - 3,863,859 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TRAPPC12 (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 12 | 123,031,084 - 123,135,000 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2A | 123,035,061 - 123,138,954 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2A | 3,388,191 - 3,490,496 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2A | 3,311,765 - 3,411,768 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2A | 3,311,765 - 3,411,768 (+) | Ensembl | | | panPan2 | panpan1.1 |
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TRAPPC12 (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 17 | 1,988,952 - 2,072,854 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 17 | 1,999,613 - 2,072,502 (+) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 17 | 1,974,475 - 2,058,834 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 17 | 2,082,687 - 2,166,471 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 17 | 2,086,156 - 2,166,471 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 17 | 1,978,309 - 2,051,719 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 17 | 1,988,778 - 2,073,092 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 17 | 1,990,618 - 2,074,262 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Trappc12 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024406292 | 46,858,177 - 46,919,568 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936532 | 1,613,966 - 1,674,914 (+) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936532 | 1,613,181 - 1,674,556 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TRAPPC12 (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 3 | 131,307,208 - 131,357,994 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 3 | 131,307,185 - 131,357,996 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 3 | 140,477,383 - 140,567,869 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TRAPPC12 (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 14 | 104,191,735 - 104,315,340 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 14 | 104,191,842 - 104,306,587 (-) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666045 | 7,931,317 - 8,109,254 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Trappc12 (Heterocephalus glaber - naked mole-rat) |
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Trappc12 (Rattus rattus - black rat) |
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