Symbol:
Coprs
Name:
coordinator of PRMT5 and differentiation stimulator
RGD ID:
1565675
Description:
Predicted to enable histone binding activity. Predicted to be involved in chromatin remodeling and muscle organ development. Predicted to act upstream of or within blastocyst hatching. Predicted to be located in cytosol; nucleoplasm; and plasma membrane. Predicted to be active in nucleus. Orthologous to human COPRS (coordinator of PRMT5 and differentiation stimulator); INTERACTS WITH 4,4'-sulfonyldiphenol; bisphenol A; bisphenol F.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
cooperator of PRMT5; coordinator of PRMT5, differentiation stimulator; Copr5; LOC290925; RGD1565675; similar to RIKEN cDNA 2410022L05
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
COPRS (coordinator of PRMT5 and differentiation stimulator)
HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):
Coprs (coordinator of PRMT5, differentiation stimulator)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Coprs (coordinator of PRMT5 and differentiation stimulator)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
COPRS (coordinator of PRMT5 and differentiation stimulator)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
COPRS (coordinator of PRMT5 and differentiation stimulator)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
COPRS (coordinator of PRMT5 and differentiation stimulator)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
COPRS (coordinator of PRMT5 and differentiation stimulator)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Coprs (coordinator of PRMT5 and differentiation stimulator)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Other homologs 2
Homo sapiens (human):
GAS2L1 (growth arrest specific 2 like 1)
HGNC
OMA
Alliance orthologs 3
Homo sapiens (human):
COPRS (coordinator of PRMT5 and differentiation stimulator)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Coprs (coordinator of PRMT5, differentiation stimulator)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 16 82,423,426 - 82,428,821 (+) NCBI GRCr8 mRatBN7.2 16 75,721,264 - 75,726,375 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 16 75,720,061 - 75,726,375 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 16 81,001,741 - 81,006,842 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 16 84,455,271 - 84,460,372 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 16 79,705,058 - 79,710,142 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 16 80,826,681 - 80,831,791 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 16 80,826,681 - 80,831,791 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 16 80,390,902 - 80,396,012 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 16 80,557,030 - 80,562,140 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 16 73,530,152 - 73,535,262 (+) NCBI Celera Cytogenetic Map 16 q12.5 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Coprs (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 16 82,423,426 - 82,428,821 (+) NCBI GRCr8 mRatBN7.2 16 75,721,264 - 75,726,375 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 16 75,720,061 - 75,726,375 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 16 81,001,741 - 81,006,842 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 16 84,455,271 - 84,460,372 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 16 79,705,058 - 79,710,142 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 16 80,826,681 - 80,831,791 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 16 80,826,681 - 80,831,791 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 16 80,390,902 - 80,396,012 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 16 80,557,030 - 80,562,140 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 16 73,530,152 - 73,535,262 (+) NCBI Celera Cytogenetic Map 16 q12.5 NCBI
COPRS (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 17 31,851,871 - 31,859,244 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 17 31,851,871 - 31,859,291 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 17 30,178,890 - 30,186,263 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 17 27,203,009 - 27,210,369 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 17 27,098,524 - 27,105,966 (-) NCBI Celera Cytogenetic Map 17 q11.2 NCBI HuRef 17 26,389,213 - 26,396,656 (-) NCBI HuRef CHM1_1 17 30,241,346 - 30,248,795 (-) NCBI CHM1_1 T2T-CHM13v2.0 17 32,797,708 - 32,805,083 (-) NCBI T2T-CHM13v2.0
Coprs (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 8 13,934,787 - 13,940,501 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 8 13,934,794 - 13,940,281 (-) Ensembl GRCm39 Ensembl GRCm38 8 13,884,787 - 13,890,352 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 8 13,884,794 - 13,890,281 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 8 13,884,788 - 13,890,271 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 8 13,884,772 - 13,890,247 (-) NCBI MGSCv36 mm8 Celera 8 14,045,092 - 14,050,575 (-) NCBI Celera Cytogenetic Map 8 A1.1 NCBI cM Map 8 6.41 NCBI
Coprs (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955481 6,787,135 - 6,800,696 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955481 6,794,088 - 6,797,723 (-) NCBI ChiLan1.0 ChiLan1.0
COPRS (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 19 32,614,253 - 32,621,661 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 17 34,493,134 - 34,500,544 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 17 24,931,356 - 24,938,763 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 17 25,669,899 - 25,676,859 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 17 25,669,899 - 25,676,859 (+) Ensembl panpan1.1 panPan2
COPRS (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 9 41,098,226 - 41,104,035 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 9 41,102,541 - 41,103,994 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 9 40,256,947 - 40,263,241 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 9 41,916,297 - 41,922,540 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 9 41,916,381 - 41,922,353 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 9 40,700,384 - 40,706,646 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 9 40,994,614 - 41,000,887 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 9 41,070,836 - 41,077,080 (+) NCBI UU_Cfam_GSD_1.0
COPRS (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 12 43,091,176 - 43,097,994 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 12 43,091,181 - 43,097,998 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 12 44,879,988 - 44,886,782 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
COPRS (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 16 25,327,180 - 25,334,493 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 16 25,327,134 - 25,334,413 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666075 4,743,159 - 4,750,495 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Coprs (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 129 Count of miRNA genes: 113 Interacting mature miRNAs: 118 Transcripts: ENSRNOT00000000123 Prediction methods: Microtar, Miranda, Rnahybrid Result types: miRGate_prediction
2300163 Bmd64 Bone mineral density QTL 64 5.3 0.0001 lumbar vertebra mineral mass (VT:0010511) volumetric bone mineral density (CMO:0001553) 16 37752156 82752156 Rat 7411648 Foco22 Food consumption QTL 22 15 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 16 52726464 84729064 Rat 1600378 Arunc4 Aerobic running capacity QTL 4 0.03 exercise endurance trait (VT:0002332) maximum distance run on treadmill (CMO:0001406) 16 380245 80345693 Rat 1578768 Stresp22 Stress response QTL 22 2.8 thymus mass (VT:0004954) thymus wet weight (CMO:0000855) 16 35288870 80288870 Rat 2293690 Bss45 Bone structure and strength QTL 45 5.13 0.0001 lumbar vertebra morphology trait (VT:0010494) lumbar vertebra cortical cross-sectional area (CMO:0001690) 16 37752156 82752156 Rat 8694364 Abfw7 Abdominal fat weight QTL 7 12.22 0.001 visceral adipose mass (VT:0010063) abdominal fat pad weight to body weight ratio (CMO:0000095) 16 52726464 84729064 Rat 8694429 Bw164 Body weight QTL 164 5 0.001 body lean mass (VT:0010483) lean tissue morphological measurement (CMO:0002184) 16 52726464 84729064 Rat 7205510 Activ5 Activity QTL 5 3.78 0.00028 locomotor behavior trait (VT:0001392) number of entries into a discrete space in an experimental apparatus (CMO:0000960) 16 42396345 84729064 Rat 70205 Gcr3 Gastric cancer resistance QTL 3 2.3 stomach morphology trait (VT:0000470) stomach tumor diameter (CMO:0001889) 16 17696791 82635055 Rat 631525 Pia14 Pristane induced arthritis QTL 14 4.4 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 16 55711087 83402471 Rat
RH134484
Rat Assembly Chr Position (strand) Source JBrowse GRCr8 16 82,428,557 - 82,428,771 (+) Marker Load Pipeline mRatBN7.2 16 75,726,342 - 75,726,556 (+) MAPPER mRatBN7.2 mRatBN7.2 X 54,518,702 - 54,518,961 (+) MAPPER mRatBN7.2 Rnor_6.0 16 80,831,759 - 80,831,972 NCBI Rnor6.0 Rnor_6.0 X 58,594,603 - 58,594,861 NCBI Rnor6.0 Rnor_5.0 X 59,380,971 - 59,381,229 UniSTS Rnor5.0 Rnor_5.0 16 80,395,980 - 80,396,193 UniSTS Rnor5.0 RGSC_v3.4 X 77,040,681 - 77,040,939 UniSTS RGSC3.4 RGSC_v3.4 16 80,562,108 - 80,562,321 UniSTS RGSC3.4 Celera 16 73,535,230 - 73,535,443 UniSTS Celera X 55,032,588 - 55,032,846 UniSTS Cytogenetic Map 16 q12.5 UniSTS
RH124841
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 16 75,726,350 - 75,726,501 (+) MAPPER mRatBN7.2 Rnor_6.0 16 80,831,767 - 80,831,917 NCBI Rnor6.0 Rnor_5.0 16 80,395,988 - 80,396,138 UniSTS Rnor5.0 RGSC_v3.4 16 80,562,116 - 80,562,266 UniSTS RGSC3.4 Celera 16 73,535,238 - 73,535,388 UniSTS Cytogenetic Map 16 q12.5 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000000123 ⟹ ENSRNOP00000000123
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 16 75,721,264 - 75,726,375 (+) Ensembl Rnor_6.0 Ensembl 16 80,826,681 - 80,831,791 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000095879 ⟹ ENSRNOP00000085951
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 16 75,720,061 - 75,726,375 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000098298 ⟹ ENSRNOP00000089318
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 16 75,721,553 - 75,726,375 (+) Ensembl
RefSeq Acc Id:
NM_001169121 ⟹ NP_001162592
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 16 82,423,480 - 82,428,590 (+) NCBI mRatBN7.2 16 75,721,264 - 75,726,375 (+) NCBI Rnor_6.0 16 80,826,681 - 80,831,791 (+) NCBI Rnor_5.0 16 80,390,902 - 80,396,012 (+) NCBI RGSC_v3.4 16 80,557,030 - 80,562,140 (+) RGD Celera 16 73,530,152 - 73,535,262 (+) RGD
Sequence:
GGGCGCCTGGCTGTGGGCGGCCCGGCATGGACCCTCAGGCAGCCACCGGTCCGGGGCCGGGCGAGCCGAGTGCATGGGAGGCCCCCAGCGCGGAGGCTGGTCTTGCCACAGCTGACCTCTCTGGTGGG GAGACAGAGACTGAGCTAGACGTGGACCGACTAGCCAGTGGAGCTCAGAGCATCCCTACTGACGTTCCTACCCATGCCGAGGGCCCAAGTTCTGAAGAGGAAGGCTTTGCAATGGAGAAGGAAGCGGA TGGGGAACTGTATGCCTGGGAGCTGTCAGAAGGTCCAGCCTGCCCACCCATGGAACAGGCTTCTGGTCTTTTTAACGAGGACTGGGACTTGGAGCTGAAAGCGGACCAAGGGAATCCTTACGATGCTG ATGACGTCCAAGGGAGCATTTCCCAAGAGATTAAGCCGTGGGTGTGCTGTGCACCACAAGGAGATATGATGTATGACCCCAGTTGGCACCATCCACCCCCACTGATACCACATTACTCCAAGATGGTC TTTGAAACAGGACAGTTTGATGATGCAGAAGACTAAAAGT
hide sequence
RefSeq Acc Id:
XM_063275264 ⟹ XP_063131334
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 16 82,423,426 - 82,428,821 (+) NCBI
RefSeq Acc Id:
NP_001162592 ⟸ NM_001169121
- UniProtKB:
A6IWF3 (UniProtKB/TrEMBL)
- Sequence:
MDPQAATGPGPGEPSAWEAPSAEAGLATADLSGGETETELDVDRLASGAQSIPTDVPTHAEGPSSEEEGFAMEKEADGELYAWELSEGPACPPMEQASGLFNEDWDLELKADQGNPYDADDVQGSISQ EIKPWVCCAPQGDMMYDPSWHHPPPLIPHYSKMVFETGQFDDAED
hide sequence
Ensembl Acc Id:
ENSRNOP00000000123 ⟸ ENSRNOT00000000123
Ensembl Acc Id:
ENSRNOP00000085951 ⟸ ENSRNOT00000095879
Ensembl Acc Id:
ENSRNOP00000089318 ⟸ ENSRNOT00000098298
RefSeq Acc Id:
XP_063131334 ⟸ XM_063275264
- Peptide Label:
isoform X1
- UniProtKB:
A6IWF4 (UniProtKB/TrEMBL), D3ZB92 (UniProtKB/TrEMBL), A6IWF3 (UniProtKB/TrEMBL)
RGD ID: 13700222
Promoter ID: EPDNEW_R10746
Type: initiation region
Name: Coprs_1
Description: coordinator of PRMT5 and differentiation stimulator
SO ACC ID: SO:0000170
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Experiment Methods: Single-end sequencing.
Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 16 80,826,693 - 80,826,753 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2016-04-20
Coprs
coordinator of PRMT5 and differentiation stimulator
Coprs
coordinator of PRMT5, differentiation stimulator
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2012-11-21
Coprs
coordinator of PRMT5, differentiation stimulator
RGD1565675
similar to RIKEN cDNA 2410022L05
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2008-04-30
RGD1565675
similar to RIKEN cDNA 2410022L05
RGD1565675_predicted
similar to RIKEN cDNA 2410022L05 (predicted)
'predicted' is removed
2292626
APPROVED
2006-03-07
RGD1565675_predicted
similar to RIKEN cDNA 2410022L05 (predicted)
LOC290925
similar to RIKEN cDNA 2410022L05
Symbol and Name status set to approved
1299863
APPROVED
2006-02-09
LOC290925
similar to RIKEN cDNA 2410022L05
Symbol and Name status set to provisional
70820
PROVISIONAL