Uty (ubiquitously transcribed tetratricopeptide repeat containing, Y-linked) - Rat Genome Database

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Gene: Uty (ubiquitously transcribed tetratricopeptide repeat containing, Y-linked) Rattus norvegicus
Analyze
Symbol: Uty
Name: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
RGD ID: 1565481
Description: Enables chromatin binding activity. Predicted to be involved in heart development and regulation of gene expression. Predicted to act upstream of or within several processes, including cardiac muscle cell contraction; heterochromatin formation; and in utero embryonic development. Predicted to be located in nucleus. Predicted to be part of MLL3/4 complex. Orthologous to human UTY (ubiquitously transcribed tetratricopeptide repeat containing, Y-linked); PARTICIPATES IN histone modification pathway; renal cell carcinoma pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 17beta-estradiol (ortholog); 2-bromohexadecanoic acid (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: histone demethylase UTY; histone demethylase UTY-like; Kdm6a; LOC103694558; LOC317178; lysine (K)-specific demethylase 6A; lysine demethylase 6A; lysine-specific demethylase 6A; RGD1565481; ubiquitously transcribed tetratricopeptide repeat gene, X chromosome; ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome; ubiquitously transcribed tetratricopeptide repeat, X chromosome; Utx
RGD Orthologs
Human
Mouse
Bonobo
Dog
Pig
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8Y1,018,111 - 1,178,493 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 EnsemblY1,010,273 - 1,178,355 (-)EnsemblGRCr8
mRatBN7.2Y942,838 - 1,105,313 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblY924,168 - 1,103,422 (-)EnsemblmRatBN7.2
Rnor_6.0Y1,065,274 - 1,206,127 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblY989,240 - 1,206,096 (-)Ensemblrn6Rnor6.0
Rnor_5.0X5,591,847 - 5,731,843 (-)NCBIRnor_5.0Rnor_5.0rn5
CeleraX4,851,606 - 4,991,287 (-)NCBICelera
Cytogenetic MapYq11NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Genetic pathways involved in carcinogenesis of clear cell renal cell carcinoma: genomics towards personalized medicine. Audenet F, etal., BJU Int. 2012 Jun;109(12):1864-70. doi: 10.1111/j.1464-410X.2011.10661.x. Epub 2011 Oct 28.
2. Histone lysine methylation dynamics: establishment, regulation, and biological impact. Black JC, etal., Mol Cell. 2012 Nov 30;48(4):491-507. doi: 10.1016/j.molcel.2012.11.006.
3. Genetic landscape of esophageal squamous cell carcinoma. Gao YB, etal., Nat Genet. 2014 Oct;46(10):1097-102. doi: 10.1038/ng.3076. Epub 2014 Aug 24.
4. Ezh1 and Ezh2 differentially regulate PSD-95 gene transcription in developing hippocampal neurons. Henriquez B, etal., Mol Cell Neurosci. 2013 Nov;57:130-43. doi: 10.1016/j.mcn.2013.07.012. Epub 2013 Aug 8.
5. Epigenetic changes in renal genes dysregulated in mouse and rat models of type 1 diabetes. Komers R, etal., Lab Invest. 2013 May;93(5):543-52. doi: 10.1038/labinvest.2013.47. Epub 2013 Mar 18.
6. Sequencing histone-modifying enzymes identifies UTX mutations in acute lymphoblastic leukemia. Mar BG, etal., Leukemia. 2012 Aug;26(8):1881-3. doi: 10.1038/leu.2012.56. Epub 2012 Mar 1.
7. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
8. Histone lysine demethylases in breast cancer. Paolicchi E, etal., Crit Rev Oncol Hematol. 2013 May;86(2):97-103. doi: 10.1016/j.critrevonc.2012.11.008. Epub 2012 Dec 23.
9. Histone-modifier gene expression profiles are associated with pathological and clinical outcomes in human breast cancer. Patani N, etal., Anticancer Res. 2011 Dec;31(12):4115-25.
10. GOA pipeline RGD automated data pipeline
11. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
12. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
13. Comprehensive gene review and curation RGD comprehensive gene curation
14. Expression and significance of histone H3K27 demethylases in renal cell carcinoma. Shen Y, etal., BMC Cancer. 2012 Oct 12;12:470. doi: 10.1186/1471-2407-12-470.
15. The COMPASS family of histone H3K4 methylases: mechanisms of regulation in development and disease pathogenesis. Shilatifard A Annu Rev Biochem. 2012;81:65-95. doi: 10.1146/annurev-biochem-051710-134100.
16. Deregulated expression of selected histone methylases and demethylases in prostate carcinoma. Vieira FQ, etal., Endocr Relat Cancer. 2013 Dec 16;21(1):51-61. doi: 10.1530/ERC-13-0375. Print 2014 Feb.
17. SWI/SNF nucleosome remodellers and cancer. Wilson BG and Roberts CW, Nat Rev Cancer. 2011 Jun 9;11(7):481-92. doi: 10.1038/nrc3068.
Additional References at PubMed
PMID:20333173   PMID:22192413   PMID:22949634   PMID:23028370   PMID:24759410  


Genomics

Comparative Map Data
Uty
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8Y1,018,111 - 1,178,493 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 EnsemblY1,010,273 - 1,178,355 (-)EnsemblGRCr8
mRatBN7.2Y942,838 - 1,105,313 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblY924,168 - 1,103,422 (-)EnsemblmRatBN7.2
Rnor_6.0Y1,065,274 - 1,206,127 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblY989,240 - 1,206,096 (-)Ensemblrn6Rnor6.0
Rnor_5.0X5,591,847 - 5,731,843 (-)NCBIRnor_5.0Rnor_5.0rn5
CeleraX4,851,606 - 4,991,287 (-)NCBICelera
Cytogenetic MapYq11NCBI
UTY
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38Y13,233,895 - 13,480,670 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblY13,234,577 - 13,480,673 (-)Ensemblhg38GRCh38
GRCh37Y15,345,776 - 15,592,550 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36Y13,869,657 - 14,101,944 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34Y13,873,045 - 14,030,681NCBI
CeleraX2,342,975 - 2,575,256 (-)NCBICelera
Cytogenetic MapYq11.221NCBI
HuRefY10,010,130 - 10,240,194 (-)NCBIHuRef
T2T-CHM13v2.0Y14,140,601 - 14,387,359 (-)NCBIT2T-CHM13v2.0
Uty
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39Y1,085,187 - 1,245,787 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblY1,096,861 - 1,245,759 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38Y1,085,187 - 1,245,773 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblY1,096,861 - 1,245,759 (-)Ensemblmm10GRCm38
MGSCv37Y433,587 - 582,181 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36Y439,206 - 582,063 (-)NCBIMGSCv36mm8
CeleraY3,928,367 - 4,071,302 (-)NCBICelera
Cytogenetic MapYpterNCBI
UTY
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2Y38,936,881 - 39,191,303 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1Y7,735,695 - 7,987,106 (+)NCBINHGRI_mPanPan1
UTY
(Canis lupus familiaris - dog)		 No map positions available.
LOC110255320
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1Y8,937,949 - 9,087,971 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1

Variants

.
Variants in Uty
449 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:317
Count of miRNA genes:138
Interacting mature miRNAs:162
Transcripts:ENSRNOT00000005742, ENSRNOT00000071375, ENSRNOT00000073473, ENSRNOT00000075712
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
G34976  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X4,377,831 - 4,377,925 (+)MAPPERmRatBN7.2
Rnor_6.0X4,846,526 - 4,846,619NCBIRnor6.0
Rnor_5.0X5,632,569 - 5,632,662UniSTSRnor5.0
RGSC_v3.4X15,954,008 - 15,954,101UniSTSRGSC3.4
CeleraX4,892,712 - 4,892,805UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
15 9 57 154 89 89 58 75 58 6 322 163 9 134 80 44 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001419831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001419832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008773695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017602447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063280575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063280576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005498739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC241873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC242055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ775728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ225011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ232470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GAPM01000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GATN01000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  PV553101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  PV553115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000082648
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 EnsemblY1,010,273 - 1,178,355 (-)Ensembl
mRatBN7.2 EnsemblY946,608 - 1,103,401 (-)Ensembl
Rnor_6.0 EnsemblY989,957 - 1,206,096 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000093013
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 EnsemblY1,018,111 - 1,178,355 (-)Ensembl
mRatBN7.2 EnsemblY945,299 - 1,103,324 (-)Ensembl
Rnor_6.0 EnsemblY989,240 - 1,206,026 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000119067   ⟹   ENSRNOP00000097587
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 EnsemblY1,018,111 - 1,178,355 (-)Ensembl
mRatBN7.2 EnsemblY924,168 - 1,103,422 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000149304   ⟹   ENSRNOP00000104952
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 EnsemblY1,018,111 - 1,142,975 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000164548   ⟹   ENSRNOP00000098675
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 EnsemblY1,018,111 - 1,178,235 (-)Ensembl
RefSeq Acc Id: NM_001419831   ⟹   NP_001406760
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,018,111 - 1,178,355 (-)NCBI
mRatBN7.2Y943,154 - 1,103,410 (-)NCBI
RefSeq Acc Id: NM_001419832   ⟹   NP_001406761
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,018,111 - 1,178,355 (-)NCBI
mRatBN7.2Y943,154 - 1,103,410 (-)NCBI
RefSeq Acc Id: XM_008773695   ⟹   XP_008771917
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,019,963 - 1,178,444 (-)NCBI
mRatBN7.2Y943,152 - 1,103,529 (-)NCBI
Rnor_6.0Y1,065,274 - 1,206,127 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017602447   ⟹   XP_017457936
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,019,963 - 1,178,435 (-)NCBI
mRatBN7.2Y943,152 - 1,103,065 (-)NCBI
Rnor_6.0Y1,065,274 - 1,205,762 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039100671   ⟹   XP_038956599
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,019,963 - 1,178,446 (-)NCBI
mRatBN7.2Y943,152 - 1,103,530 (-)NCBI
RefSeq Acc Id: XM_039100672   ⟹   XP_038956600
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,019,963 - 1,178,440 (-)NCBI
mRatBN7.2Y943,152 - 1,103,525 (-)NCBI
RefSeq Acc Id: XM_039100673   ⟹   XP_038956601
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,019,963 - 1,178,445 (-)NCBI
mRatBN7.2Y943,152 - 1,103,529 (-)NCBI
RefSeq Acc Id: XM_039100675   ⟹   XP_038956603
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,019,963 - 1,178,436 (-)NCBI
mRatBN7.2Y943,152 - 1,103,521 (-)NCBI
RefSeq Acc Id: XM_039100676   ⟹   XP_038956604
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,019,963 - 1,178,447 (-)NCBI
mRatBN7.2Y943,152 - 1,103,544 (-)NCBI
RefSeq Acc Id: XM_039100677   ⟹   XP_038956605
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,019,963 - 1,178,439 (-)NCBI
mRatBN7.2Y943,152 - 1,103,523 (-)NCBI
RefSeq Acc Id: XM_039100678   ⟹   XP_038956606
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,019,963 - 1,178,436 (-)NCBI
mRatBN7.2Y943,152 - 1,103,520 (-)NCBI
RefSeq Acc Id: XM_039100679   ⟹   XP_038956607
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,019,963 - 1,140,477 (-)NCBI
mRatBN7.2Y943,152 - 1,065,382 (-)NCBI
RefSeq Acc Id: XM_039100680   ⟹   XP_038956608
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,019,963 - 1,121,363 (-)NCBI
mRatBN7.2Y943,152 - 1,048,814 (-)NCBI
RefSeq Acc Id: XM_039100683   ⟹   XP_038956611
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,019,963 - 1,112,883 (-)NCBI
mRatBN7.2Y942,838 - 1,037,927 (-)NCBI
RefSeq Acc Id: XM_039100684   ⟹   XP_038956612
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,019,963 - 1,089,616 (-)NCBI
mRatBN7.2Y942,838 - 1,014,658 (-)NCBI
RefSeq Acc Id: XM_063280575   ⟹   XP_063136645
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,021,784 - 1,178,350 (-)NCBI
RefSeq Acc Id: XM_063280576   ⟹   XP_063136646
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,019,963 - 1,121,363 (-)NCBI
RefSeq Acc Id: XR_005498739
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y1,064,633 - 1,178,493 (-)NCBI
mRatBN7.2Y989,677 - 1,105,313 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001406760 (Get FASTA)   NCBI Sequence Viewer  
  NP_001406761 (Get FASTA)   NCBI Sequence Viewer  
  XP_008771917 (Get FASTA)   NCBI Sequence Viewer  
  XP_017457936 (Get FASTA)   NCBI Sequence Viewer  
  XP_038956599 (Get FASTA)   NCBI Sequence Viewer  
  XP_038956600 (Get FASTA)   NCBI Sequence Viewer  
  XP_038956601 (Get FASTA)   NCBI Sequence Viewer  
  XP_038956603 (Get FASTA)   NCBI Sequence Viewer  
  XP_038956604 (Get FASTA)   NCBI Sequence Viewer  
  XP_038956605 (Get FASTA)   NCBI Sequence Viewer  
  XP_038956606 (Get FASTA)   NCBI Sequence Viewer  
  XP_038956607 (Get FASTA)   NCBI Sequence Viewer  
  XP_038956608 (Get FASTA)   NCBI Sequence Viewer  
  XP_038956611 (Get FASTA)   NCBI Sequence Viewer  
  XP_038956612 (Get FASTA)   NCBI Sequence Viewer  
  XP_063136645 (Get FASTA)   NCBI Sequence Viewer  
  XP_063136646 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein ACX55120 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000082150
  ENSRNOP00000082150.2
  ENSRNOP00000082524
  ENSRNOP00000082524.2
  ENSRNOP00000097587
  ENSRNOP00000097587.2
  ENSRNOP00000098675.1
  ENSRNOP00000104952
  ENSRNOP00000104952.1
GenBank Protein JAB84473 (Get FASTA)   NCBI Sequence Viewer  
  JAC06674 (Get FASTA)   NCBI Sequence Viewer  
  XRQ54488 (Get FASTA)   NCBI Sequence Viewer  
  XRQ54502 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_008771917   ⟸   XM_008773695
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GMK8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017457936   ⟸   XM_017602447
- Peptide Label: isoform X7
- UniProtKB: A0A8I6GMK8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038956611   ⟸   XM_039100683
- Peptide Label: isoform X14
- UniProtKB: W8C8I9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038956612   ⟸   XM_039100684
- Peptide Label: isoform X15
- UniProtKB: W8C8I9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038956604   ⟸   XM_039100676
- Peptide Label: isoform X8
- UniProtKB: A0A8I6G9K0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038956599   ⟸   XM_039100671
- Peptide Label: isoform X2
- UniProtKB: A0A8I6GMK8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038956601   ⟸   XM_039100673
- Peptide Label: isoform X4
- UniProtKB: A0A8I6GMK8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038956600   ⟸   XM_039100672
- Peptide Label: isoform X3
- UniProtKB: A0A8I6GMK8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038956605   ⟸   XM_039100677
- Peptide Label: isoform X9
- UniProtKB: A0A8I6G9K0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038956603   ⟸   XM_039100675
- Peptide Label: isoform X5
- UniProtKB: A0A8I6GMK8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038956606   ⟸   XM_039100678
- Peptide Label: isoform X10
- UniProtKB: A0A8I6G9K0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038956607   ⟸   XM_039100679
- Peptide Label: isoform X11
- UniProtKB: W8C8I9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038956608   ⟸   XM_039100680
- Peptide Label: isoform X12
- UniProtKB: W8C8I9 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000097587   ⟸   ENSRNOT00000119067
RefSeq Acc Id: NP_001406760   ⟸   NM_001419831
- UniProtKB: A0A8I6GMK8 (UniProtKB/TrEMBL),   V9GWA8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001406761   ⟸   NM_001419832
- UniProtKB: A0A8I6GMK8 (UniProtKB/TrEMBL),   V9GWA8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063136646   ⟸   XM_063280576
- Peptide Label: isoform X13
- UniProtKB: W8C8I9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063136645   ⟸   XM_063280575
- Peptide Label: isoform X6
- UniProtKB: A0A8I5ZTM6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000104952   ⟸   ENSRNOT00000149304
Ensembl Acc Id: ENSRNOP00000098675   ⟸   ENSRNOT00000164548
Protein Domains
JmjC

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1565481 AgrOrtholog
BioCyc Gene G2FUF-567 BioCyc
Ensembl Genes ENSRNOG00000060617 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000082648 ENTREZGENE
  ENSRNOT00000082648.3 UniProtKB/TrEMBL
  ENSRNOT00000093013 ENTREZGENE
  ENSRNOT00000093013.3 UniProtKB/TrEMBL
  ENSRNOT00000119067 ENTREZGENE
  ENSRNOT00000119067.2 UniProtKB/TrEMBL
  ENSRNOT00000149304 ENTREZGENE
  ENSRNOT00000149304.1 UniProtKB/TrEMBL
  ENSRNOT00000164548.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.58.1370 UniProtKB/TrEMBL
  1.25.40.10 UniProtKB/TrEMBL
  2.10.110.20 UniProtKB/TrEMBL
  Cupin UniProtKB/TrEMBL
InterPro Corepressor-Demethylase UniProtKB/TrEMBL
  JmjC_dom UniProtKB/TrEMBL
  KDM6_GATAL_sf UniProtKB/TrEMBL
  KDM6A_B-like_C-hel UniProtKB/TrEMBL
  KDM6A_B-like_GATAL UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/TrEMBL
  TPR_repeat UniProtKB/TrEMBL
NCBI Gene Uty ENTREZGENE
PANTHER HISTONE DEMETHYLASE UTY UniProtKB/TrEMBL
  LYSINE-SPECIFIC DEMETHYLASE UniProtKB/TrEMBL
Pfam JmjC UniProtKB/TrEMBL
  KDM6_C-hel UniProtKB/TrEMBL
  KDM6_GATAL UniProtKB/TrEMBL
  TPR_8 UniProtKB/TrEMBL
PhenoGen Uty PhenoGen
PROSITE JMJC UniProtKB/TrEMBL
  TPR UniProtKB/TrEMBL
RatGTEx ENSRNOG00000060617 RatGTEx
SMART JmjC UniProtKB/TrEMBL
  TPR UniProtKB/TrEMBL
Superfamily-SCOP Clavaminate synthase-like UniProtKB/TrEMBL
  HCP-like UniProtKB/TrEMBL
  SSF48452 UniProtKB/TrEMBL
UniProt A0A8I5ZTM6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6G9K0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GMK8 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0L4Z8_RAT UniProtKB/TrEMBL
  A0ABK0LW27_RAT UniProtKB/TrEMBL
  C9WPN3_RAT UniProtKB/TrEMBL
  V9GWA8 ENTREZGENE, UniProtKB/TrEMBL
  W8C8I9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Uty  ubiquitously transcribed tetratricopeptide repeat containing, Y-linked  LOC103694558  histone demethylase UTY-like  Data merged from RGD:9144007 737654 PROVISIONAL
2020-01-17 Uty  ubiquitously transcribed tetratricopeptide repeat containing, Y-linked  Uty  ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2017-03-27 Uty  ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome  Uty  ubiquitously transcribed tetratricopeptide repeat containing, Y-linked  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2016-10-20 Uty  ubiquitously transcribed tetratricopeptide repeat containing, Y-linked  Kdm6a  lysine demethylase 6A  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2016-02-17 Kdm6a  lysine demethylase 6A  Kdm6a  lysine (K)-specific demethylase 6A  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2014-08-25 LOC103694558  histone demethylase UTY-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2011-09-08 Kdm6a  lysine (K)-specific demethylase 6A  Uty  ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome  Data merged from RGD:2317874 737654 APPROVED
2010-05-05 Kdm6a  lysine (K)-specific demethylase 6A  Utx  ubiquitously transcribed tetratricopeptide repeat, X chromosome  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-04-29 Uty  ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-10-23 Utx  ubiquitously transcribed tetratricopeptide repeat, X chromosome  Utx  ubiquitously transcribed tetratricopeptide repeat gene, X chromosome   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Utx  ubiquitously transcribed tetratricopeptide repeat gene, X chromosome   Utx_predicted  ubiquitously transcribed tetratricopeptide repeat gene, X chromosome (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Utx_predicted  ubiquitously transcribed tetratricopeptide repeat gene, X chromosome (predicted)  RGD1565481_predicted  similar to ubiquitously transcribed tetratricopeptide repeat gene, X chromosome (predicted)  Symbol and Name updated 1299863 APPROVED
2006-03-07 RGD1565481_predicted  similar to ubiquitously transcribed tetratricopeptide repeat gene, X chromosome (predicted)  LOC317178  similar to ubiquitously transcribed tetratricopeptide repeat gene, X chromosome  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC317178  similar to ubiquitously transcribed tetratricopeptide repeat gene, X chromosome      Symbol and Name status set to provisional 70820 PROVISIONAL