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Gene: Patj (PATJ, crumbs cell polarity complex component) Rattus norvegicus

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Symbol:

Patj

Name:

PATJ, crumbs cell polarity complex component

RGD ID:

1565362

Description:

Predicted to be involved in several processes, including establishment of apical/basal cell polarity; positive regulation of epithelial cell migration; and tight junction assembly. Part of protein-containing complex. Orthologous to human PATJ (PATJ crumbs cell polarity complex component); INTERACTS WITH 6-propyl-2-thiouracil; acrylamide; amitriptyline.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

InaD-like (Drosophila); InaD-like 2; InaD-like 2 (Drosophila); inaD-like protein; Inadl; Inadl2; LOC313382; PDZ domain protein; PDZ domain protein (Drosophila inaD-like); RGD1565362; similar to channel-interacting pdz domain protein isoform 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PATJ (PATJ crumbs cell polarity complex component)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Patj (PATJ, crumbs cell polarity complex component)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Patj (PATJ crumbs cell polarity complex component)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PATJ (PATJ crumbs cell polarity complex component)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PATJ (PATJ crumbs cell polarity complex component)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Patj (PATJ crumbs cell polarity complex component)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PATJ (PATJ crumbs cell polarity complex component)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PATJ (PATJ crumbs cell polarity complex component)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Patj (PATJ crumbs cell polarity complex component)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Patj (PATJ crumbs cell polarity complex component)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Patj (PATJ, crumbs cell polarity complex component)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	PATJ (PATJ crumbs cell polarity complex component)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	mpz-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	mpz-1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	patj	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Patj	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	inaD	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	patj	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Allele / Splice:

Patj^{Tn(sb-T2/Bart3)2.343Mcwi}

Genetic Models:

F344-Patj^{Tn(sb-T2/Bart3)2.343Mcwi}

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	118,177,557 - 118,480,301 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	118,177,565 - 118,480,301 (+)	Ensembl				GRCr8
mRatBN7.2	5	113,061,985 - 113,364,807 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	113,062,118 - 113,364,807 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	115,640,473 - 115,944,504 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	117,365,825 - 117,669,843 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	117,428,349 - 117,732,383 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	117,038,548 - 117,340,308 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	117,052,260 - 117,340,336 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	120,981,525 - 121,281,044 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	118,806,744 - 119,131,114 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	111,633,199 - 111,931,738 (+)	NCBI		Celera
Cytogenetic Map	5	q33	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Prostatic Neoplasms (ISO)

substance-related disorder (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(S)-nicotine (ISO)

1,1-dichloroethene (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

8-Br-cAMP (ISO)

acrolein (ISO)

acrylamide (EXP,ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

amitriptyline (EXP)

ammonium chloride (EXP)

amphetamine (EXP)

Ampullosporin (EXP)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

atrazine (EXP)

benzene (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bis(2-chloroethyl) sulfide (EXP)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

Brodifacoum (EXP)

Bufotalin (ISO)

butanal (ISO)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

calcitriol (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

corosolic acid (ISO)

coumestrol (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

dibenzo[a,l]pyrene (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

entinostat (ISO)

ethanol (ISO)

finasteride (EXP)

flutamide (EXP)

formaldehyde (ISO)

FR900359 (ISO)

fulvestrant (ISO)

gentamycin (EXP)

ketamine (EXP)

mercury dibromide (ISO)

mercury dichloride (ISO)

methapyrilene (ISO)

methoxychlor (EXP)

morphine (ISO)

Muraglitazar (EXP)

N-methyl-N-nitrosourea (ISO)

nicotine (ISO)

Nor-9-carboxy-delta9-THC (ISO)

ozone (ISO)

panobinostat (ISO)

paracetamol (EXP,ISO)

pentanal (ISO)

phenylmercury acetate (ISO)

potassium dichromate (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium dichromate (EXP)

Tesaglitazar (EXP)

titanium dioxide (ISO)

trichostatin A (ISO)

triphenyl phosphate (EXP,ISO)

triptonide (ISO)

tris(2-butoxyethyl) phosphate (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

establishment of apical/basal cell polarity (ISO,ISS)

microtubule organizing center organization (ISO)

positive regulation of epithelial cell migration (ISO)

regulation of microtubule cytoskeleton organization (ISO)

regulation of protein localization (ISO)

tight junction assembly (IBA,ISO,ISS)

Cellular Component

apical part of cell (IBA,ISO)

apical plasma membrane (IEA,ISO,ISS)

bicellular tight junction (IBA,IEA,ISO)

cell junction (IEA,ISO)

cell leading edge (ISO)

centriolar satellite (IEA,ISO)

cytoplasm (IBA)

perinuclear region of cytoplasm (IEA,ISO)

plasma membrane (IBA)

protein-containing complex (IDA)

subapical complex (ISO)

tight junction (ISO,ISS)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Par3/Par6 polarity complex coordinates apical ectoplasmic specialization and blood-testis barrier restructuring during spermatogenesis.	Wong EW, etal., Proc Natl Acad Sci U S A. 2008 Jul 15;105(28):9657-62. Epub 2008 Jul 10.

Additional References at PubMed

PMID:11964389	PMID:14758363	PMID:15225788	PMID:18596123	PMID:19056867	PMID:20152177	PMID:22006950	PMID:22337881	PMID:23533145	PMID:25636444

Genomics

Comparative Map Data

Patj
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	118,177,557 - 118,480,301 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	118,177,565 - 118,480,301 (+)	Ensembl				GRCr8
mRatBN7.2	5	113,061,985 - 113,364,807 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	113,062,118 - 113,364,807 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	115,640,473 - 115,944,504 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	117,365,825 - 117,669,843 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	117,428,349 - 117,732,383 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	117,038,548 - 117,340,308 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	117,052,260 - 117,340,336 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	120,981,525 - 121,281,044 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	118,806,744 - 119,131,114 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	111,633,199 - 111,931,738 (+)	NCBI		Celera
Cytogenetic Map	5	q33	NCBI

PATJ
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	61,742,480 - 62,163,915 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	61,742,477 - 62,178,675 (+)	Ensembl			hg38	GRCh38
GRCh37	1	62,208,152 - 62,629,587 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	61,980,737 - 62,402,180 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	1	60,496,772 - 60,918,615 (+)	NCBI		Celera
Cytogenetic Map	1	p31.3	NCBI
HuRef	1	60,320,895 - 60,742,543 (+)	NCBI		HuRef
CHM1_1	1	62,323,629 - 62,744,942 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	61,621,342 - 62,042,561 (+)	NCBI		T2T-CHM13v2.0

Patj
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	98,283,803 - 98,607,840 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	98,284,022 - 98,607,840 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	98,395,560 - 98,719,603 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	98,395,785 - 98,719,603 (+)	Ensembl			mm10	GRCm38
MGSCv37	4	98,062,517 - 98,386,294 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	97,887,844 - 98,211,621 (+)	NCBI		MGSCv36	mm8
Celera	4	96,759,588 - 97,075,177 (+)	NCBI		Celera
Cytogenetic Map	4	C6	NCBI
cM Map	4	45.6	NCBI

Patj
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955423	27,409,623 - 27,629,731 (-)	Ensembl
ChiLan1.0	NW_004955423	27,408,334 - 27,637,065 (-)	NCBI	ChiLan1.0	ChiLan1.0

PATJ
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	164,694,360 - 165,117,105 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	163,844,049 - 164,266,301 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	60,993,316 - 61,416,043 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	62,832,424 - 63,233,073 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	62,832,424 - 63,247,074 (+)	Ensembl			panPan2	panpan1.1

PATJ
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	47,913,433 - 48,268,043 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	47,914,284 - 48,256,861 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	47,973,462 - 48,335,754 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	48,097,120 - 48,453,049 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	48,097,122 - 48,452,964 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	48,051,707 - 48,405,688 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	47,998,363 - 48,352,502 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	48,260,886 - 48,617,091 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Patj
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	75,084,131 - 75,401,322 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936522	25,143 - 332,126 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936522	15,136 - 233,484 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PATJ
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	150,245,497 - 150,605,544 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	6	150,248,714 - 150,605,565 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	138,472,898 - 138,557,009 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PATJ
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	70,910,594 - 71,300,877 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	70,910,447 - 71,301,424 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666033	46,104,468 - 46,515,476 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Patj
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624742	31,550,498 - 31,719,424 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624742	31,510,784 - 31,725,256 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Patj
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	55,804,846 - 56,078,723 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Patj
2035 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	615
Count of miRNA genes:	253
Interacting mature miRNAs:	312
Transcripts:	ENSRNOT00000010112, ENSRNOT00000010211, ENSRNOT00000057943, ENSRNOT00000065197
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331796	Thshl2	Thyroid stimulating hormone level QTL 2	2.3		blood thyroid-stimulating hormone amount (VT:0005119)	serum thyroid stimulating hormone level (CMO:0001248)	5	102105698	152749382	Rat
1357396	Bw44	Body weight QTL 44	4.19		body mass (VT:0001259)	body weight (CMO:0000012)	5	73779642	118779642	Rat
2303586	Gluco52	Glucose level QTL 52	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	100826632	145826632	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	44924861	153890773	Rat
8552960	Pigfal15	Plasma insulin-like growth factor 1 level QTL 15			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	116702075	161702075	Rat
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	38207390	136631402	Rat
1298070	Scl18	Serum cholesterol level QTL 18	3.7		blood LDL cholesterol amount (VT:0000181)	calculated plasma low density lipoprotein cholesterol level (CMO:0001245)	5	84630798	129630798	Rat
61452	Ciaa5	CIA Autoantibody QTL 5	3.5		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	5	99905133	172190305	Rat
1331801	Rf33	Renal function QTL 33	4.149		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	48523123	134369373	Rat
1298077	Bp157	Blood pressure QTL 157			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	114474223	121056531	Rat
2302381	Bw84	Body weight QTL 84	4.47		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	5	73779642	118779642	Rat
1357402	Bw46	Body weight QTL 46	4.47		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	5	73779642	118779642	Rat
7411582	Foco3	Food consumption QTL 3	7.5	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	5	92583776	137583776	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	65089051	166764498	Rat
1598859	Cm66	Cardiac mass QTL 66	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	84630798	129630798	Rat
7207486	Bss109	Bone structure and strength QTL 109			femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	5	112142946	157142946	Rat
7207481	Bss106	Bone structure and strength QTL 106	7.9		femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	5	112142946	157142946	Rat
1302790	Scl20	Serum cholesterol level QTL 20	6.4	0.0001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	110770739	155770739	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	51657967	166600247	Rat
1549838	Bss4	Bone structure and strength QTL 4	9.2		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	5	112142946	157142946	Rat
1582212	Livw2	Liver weight QTL 2	3.5	0.0004	liver mass (VT:0003402)	liver weight to body weight ratio (CMO:0000633)	5	104018576	124314782	Rat
7411564	Bw135	Body weight QTL 135		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	92583776	137583776	Rat
8657050	Bw146	Body weight QTL 146	19.84	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	98972960	143972960	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55124766	172190305	Rat
7411601	Foco12	Food consumption QTL 12	19.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	5	92583776	137583776	Rat
2303618	Vencon1	Ventilatory control QTL 1	3.8		respiration trait (VT:0001943)	oxygen consumption (CMO:0002169)	5	100826632	145826632	Rat
2317056	Wbc3	White blood cell count QTL 3	2.51	0.01	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	5	111236572	156236572	Rat
1598846	Bp293	Blood pressure QTL 293	3.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	84630798	129630798	Rat
7394710	Emca12	Estrogen-induced mammary cancer QTL 12			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	94034903	139034903	Rat
1598847	Cm62	Cardiac mass QTL 62	3.4		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	114131300	159131300	Rat
1358909	Kidm25	Kidney mass QTL 25	1.87		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	5	95062526	133270832	Rat
70189	Mcs5	Mammary carcinoma susceptibility QTL 5	10.51		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	60601597	137492949	Rat
8694441	Bw169	Body weight QTL 169	17.61	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	5	116702075	161702075	Rat
7207488	Bss110	Bone structure and strength QTL 1	8.4		femur strength trait (VT:0010010)	femur stiffness (CMO:0001674)	5	112142946	157142946	Rat
7207491	Bss112	Bone structure and strength QTL 112	7		femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	5	112142946	157142946	Rat
8694389	Bw160	Body weight QTL 160	6.17	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	5	116702075	161702075	Rat
1600362	Mcs19	Mammary carcinoma susceptibility QTL 19	2.5		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	82032155	127032155	Rat
1354598	Srn6	Serum renin concentration QTL 6	3.8		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	5	74335621	156302135	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	36460764	136631402	Rat
8694198	Abfw3	Abdominal fat weight QTL 3	16.13	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	5	116702075	161702075	Rat
1298086	Bp156	Blood pressure QTL 156			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	89369373	134369373	Rat
2306971	Anxrr21	Anxiety related response QTL 21	9.47		fear/anxiety-related behavior trait (VT:1000241)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	5	70969494	136328156	Rat
1298089	Scl14	Serum cholesterol level QTL 14	5.8	0.0004	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	114131300	159131300	Rat
1358895	Bp254	Blood pressure QTL 254	3.6	0.0003	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	5	97492524	133270832	Rat
2312671	Scl64	Serum cholesterol level QTL 64		0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	73779642	118779642	Rat
1358889	Bp261	Blood pressure QTL 261	2.86		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	5	95062526	133270832	Rat
6903316	Bw113	Body weight QTL 113	2	0.0103	body mass (VT:0001259)	body weight (CMO:0000012)	5	92881678	137881678	Rat
1358187	Emca1	Estrogen-induced mammary cancer QTL 1	4.4		mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	5	104262817	153890625	Rat

Markers in Region

D5Rat25

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	5	118,176,414 - 118,176,602 (+)	Marker Load Pipeline
mRatBN7.2	5	113,060,909 - 113,061,097 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	117,037,089 - 117,037,276	NCBI	Rnor6.0
Rnor_5.0	5	120,979,996 - 120,980,183	UniSTS	Rnor5.0
RGSC_v3.4	5	118,805,536 - 118,805,723	UniSTS	RGSC3.4
RGSC_v3.4	5	118,805,535 - 118,805,723	RGD	RGSC3.4
Celera	5	111,631,991 - 111,632,178	UniSTS
RGSC_v3.1	5	118,810,762 - 118,810,949	RGD
RH 3.4 Map	5	789.6	UniSTS
RH 3.4 Map	5	789.6	RGD
SHRSP x BN Map	5	61.5499	RGD
SHRSP x BN Map	5	61.5499	UniSTS
Cytogenetic Map	5	q33	UniSTS

RH143216

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	113,364,282 - 113,364,390 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	117,339,784 - 117,339,891	NCBI	Rnor6.0
Rnor_5.0	5	121,280,905 - 121,281,012	UniSTS	Rnor5.0
RGSC_v3.4	5	119,131,961 - 119,132,068	UniSTS	RGSC3.4
Celera	5	111,931,214 - 111,931,321	UniSTS
RH 3.4 Map	5	794.9	UniSTS
Cytogenetic Map	5	q33	UniSTS

RH142079

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	113,362,916 - 113,363,115 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	117,338,418 - 117,338,616	NCBI	Rnor6.0
Rnor_5.0	5	121,279,539 - 121,279,737	UniSTS	Rnor5.0
RGSC_v3.4	5	119,130,595 - 119,130,793	UniSTS	RGSC3.4
Celera	5	111,929,848 - 111,930,046	UniSTS
RH 3.4 Map	9	58.2	UniSTS
Cytogenetic Map	5	q33	UniSTS

AU049786

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	113,246,624 - 113,246,759 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	117,222,689 - 117,222,823	NCBI	Rnor6.0
Rnor_5.0	5	121,165,800 - 121,165,934	UniSTS	Rnor5.0
RGSC_v3.4	5	119,007,905 - 119,008,039	UniSTS	RGSC3.4
Celera	5	111,814,675 - 111,814,791	UniSTS
Cytogenetic Map	5	q33	UniSTS

UniSTS:234969

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	113,335,953 - 113,336,240 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	117,311,488 - 117,311,774	NCBI	Rnor6.0
Rnor_5.0	5	121,252,809 - 121,253,095	UniSTS	Rnor5.0
RGSC_v3.4	5	119,103,292 - 119,103,578	UniSTS	RGSC3.4
Celera	5	111,903,153 - 111,903,439	UniSTS
Cytogenetic Map	5	q33	UniSTS

Genetic Models

This gene Patj is modified in the following models/strains:

F344-Patj^{Tn(sb-T2/Bart3)2.343Mcwi}

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_080398	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238424	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238425	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763915	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763916	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593136	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039109186	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039109188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287100	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287101	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF313483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212560	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000010211 ⟹ ENSRNOP00000010211

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	118,177,623 - 118,480,301 (+)	Ensembl
mRatBN7.2 Ensembl	5	113,062,118 - 113,364,807 (+)	Ensembl
Rnor_6.0 Ensembl	5	117,052,260 - 117,340,336 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000094178 ⟹ ENSRNOP00000092161

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	118,177,623 - 118,447,579 (+)	Ensembl
mRatBN7.2 Ensembl	5	113,062,118 - 113,332,082 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095175 ⟹ ENSRNOP00000079221

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	118,177,623 - 118,480,301 (+)	Ensembl
mRatBN7.2 Ensembl	5	113,062,118 - 113,364,807 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000101438 ⟹ ENSRNOP00000077045

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	118,177,623 - 118,480,301 (+)	Ensembl
mRatBN7.2 Ensembl	5	113,062,118 - 113,364,807 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000103328 ⟹ ENSRNOP00000097148

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	118,322,670 - 118,478,699 (+)	Ensembl
mRatBN7.2 Ensembl	5	113,207,165 - 113,363,205 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000132099 ⟹ ENSRNOP00000103339

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	118,177,623 - 118,477,166 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000165802 ⟹ ENSRNOP00000105981

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	118,177,565 - 118,479,908 (+)	Ensembl

RefSeq Acc Id:

NM_080398 ⟹ NP_536323

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	118,177,623 - 118,480,301 (+)	NCBI
mRatBN7.2	5	113,062,118 - 113,364,807 (+)	NCBI
Rnor_6.0	5	117,038,630 - 117,340,308 (+)	NCBI
Celera	5	111,633,199 - 111,931,738 (+)	NCBI

Sequence:

show sequence

AGCAGCTGTACTTCCGCCAGGTGAGGAGGCCGTGATCGCAGCCTCGGGGCTCCCACCCGGCTGT
CGCCTGATCAGACTTAGGATTGAAAGTGCTTGAAAAGAGTGATCCAAAATGCCTGAAAACCCTG
CTGCAGAGAAAATGCAGGTCCTGCAGGTCCTCGACCGCCTGAGGGGGAAGCTGCAAGAGAAGGG
AGACACGACGCAGAACGAGAAGCTGTCTGCGTTTTATGAGACGCTGAAGAGCCCTCTCTTCAAC
CAGATCCTTACACTGCAGCAGTCCATCAAGCAGCTGAAGGGACAGCTCAGCCATATCCCCTCAG
ATTGTTCAGCCAACTTTGACTTTTCTCGGAAGGGCTTGTTAGTGTTCACGGATGGTTCCATTAC
AAATGGGAATGCCCACAGGCCTTGTAGTAGTATAACTGCATCTGAATCGTTGCCTTGGACTCAA
AGATCAGGAAATGAAGACTTTACCTCAGTCATTCAGCAGATGGCTCAGGGCCGGCACATTGAGT
ATATAGATATAGAACGCCCTTCAACTGGAGGCCTTGGATTCAGTGTGGTGGCTCTGAGAAGCCA
AAGTCTGGGATTAATTGACATCTTTGTGAAGGAAGTCCATCCGGGGAGTGTAGCAGACAGGGAT
CAGAGATTGAAGGAAAATGACCAGATTTTGGCCATTAATGACACCCCATTGGATCAGAATATTT
CCCATCAGCAGGCGATTGCATTACTACAACAAGCCACTGGATCTCTGCGGCTGGTTGTGGCCAG
GGAAGTGGGCCACACACAGAGCCGAACATCCACCAGCTCAGCTGATACAACTCTGCCAGAAACG
GTGCGTTGGGGCCACACTGAAGATGTTGAGCTCATTAATGATGGCTCTGGATTAGGTTTTGGGA
TAGTTGGAGGCAAATCCAGTGGTGTGGTCGTGAGGACTATTGTCCCTGGAGGATTGGCGGACCG
AGATGGAAGACTACAGACAGGGGACCACATCTTAAAGATTGGAAGTACAAACGTGCAAGGAATG
ACCAGTGAACAAGTTGCTCAGGTGCTAAGAAATTGTGGGAATTCAGTGAGGATGCTGGTGGCCA
GAGACCCTGTTGGTGAAATTGCAGTAACACCTCCGACGCCTGCATCCTTACCTGTTGCCCTCCC
TGTTGTAGCCACAAGGACCCTTGGTTCTGACAGTTCTCCTTTTGAGACTTACAATGTTGAACTT
GTCAAAAAAGATGGACAGAGTCTTGGGATTAGAATTGTTGGCTATGTTGGAACAGCTCATCCAG
GGGAAGCTTCAGGGATTTATGTGAAAAGTATAATCCCAGGCAGCGCTGCATACCACAATGGCCA
AATTCAAGTGAACGATAAAATTGTGGCTGTGGATGGTGTGAATATTCAGGGTTTTGCCAATCAG
GACGTTGTTGAAGTTCTGCGGAACGCAGGGCAGGTGGTGCACCTGACCCTAGTTCGAAGGAAAA
CATCTTTATCTGCTTCTCCATTTGAACAACCTTCAAGCAGAGAAGCTGTTGCAGAACCACCTGA
AGTGCCAGAACTAACTGGATCCCTGAAACCAGAAACTAATTCGAGAATGGAAGCAGAGGAAATC
GGAGAAAGACTGGATAATCTGAGAAAGGACACCGTACAAGCCTTAGAAAAACCAGACGTATATC
CAGAGGACATCCCAGGCTGTCCAGAAAATGAGCTGAAATCCAGATGGGAAAACCTACTGGGCCC
AGATTATGAAGTAATGGTAGCCACGTTGGACACGCAGATAGCAGATGATGAGGAGCTTCAGAAG
TACTCCAAGCTGCTGCCTATCCACACTCTGAGGCTTGGTATGGAGGTGGACTCCTTCGATGGGC
ACCACTATATCTCCTCCATTGCTCCTGGGGGTCCTGTGGATACCCTGAACCTCCTGCAGCCAGA
GGATGAGCTTCTCGAGGTCAATGGCGTGCAGCTTTATGGGAAGTCTCGCCGAGAAGCAGTCTCC
TTTCTTAAAGAAGTGCCCCCACCATTTACCTTGGTTTGCTGCCGCCGGCTGTTTGATGACGAGG
CCTCAGTTGATGAGCCGAGAACTGTGGAACCTTCTCTTCTTGAGGCAGAGGTCGACCGCAGTGT
AGATGTCAGCACTGAAGATGATGATGGAGAATTAGCCCTGTGGTCTCCTGAAGTCAAGACTGTG
GAGCTGGTCAAAGACTGCAAAGGCTTAGGATTCAGCATTTTGGATTATCAGGACCCCCTGGATC
CCATGAGGTCAGTGATTGTGATTCGCTCCTTGGTGGCAGATGGCGTAGCAGAAAGAAGTGGAGA
ACTTTTGCCTGGAGATCGCCTAGTCTCCGTCAATGAGTTCTCTCTGGACAATGCCACTCTTGCT
GAGGCTGTGGAAGTGTTGAAGGCTGTACCCCCAGGTGTGGTGCACCTTGGCATCTGTAAGCCTT
TGGTGGAGGAGGAGAAGGAGGAGAAGGAGGAACATTTTATTTTCCATTCAAACAACAATGGAGA
TAACAGTGAGTCTCCAGAAACCGTTCACGAGATCCACTCATCTTTAATCCTCGAGGCACCCCAG
GGATTTAGAGATGAGCCGTATCTTGAAGAACTCGTGGATGAACCTTTTCTAGATTTGGGAAAGT
CTTTGCAGTTCCAACAAAAAGACATGGACAGCAGCTCAGAAGCCTGGGAAATGCATGAATTCCT
GAGCCCTCGGCTGGAGAGAAGGGGTGAGGAAAGAGAGATGCTTGTTGACGAGGAGTATGAGATC
TACCAAGACCGCCTCCGGGACATGGAAGCACACCCACCACCTCCTCACATTCGGGAGCCCACTT
CTGCATCTCCCAGGCTGGATCTCCAGGCCGGCCCCCAGTGGCTGCATGCTGACCTCTCAGGAGG
AGAGATACTCGAGTGTCACGACACAGAGTCCATGATGACTGCTTATCCCCAGGAGATGCAGGAC
TATAGCTTCAGCACCACAGACATGATGAAAGAAACATTTGGCCTTGACTCCCGGCCGCCCATGC
CCTCCTCTGAAGGAAATGGTCAGCACGGCCGATTTGATGACTTGGAACATCTTCACTCACTAGT
GAGCCACGGCCTGGATTTAGGCATGATGACTCCAAGTGACTTGCAAGGCCCTGGCGTGCTTGTA
GATCTTCCAGCTGTCACCCAAAGAAGAGAACAGGAAGAGTTGCCCCTGTACCGACTCCCCAGTG
CCCGTGTGGTCACCAAGCCTTCCTCGCACGTGGGAATGGTGTCTTCACGACATGCAAATGCTGC
ATGTGAATTACCTGAGAGAGAGGAAGGTGAAGGAGAGGAAACACCGAACTTCAGTCACTGGGGC
CCACCAAGAATTGTTGAAATCTTTAGAGAACCTAATGTGTCTCTTGGCATCAGCATTGTTGGTG
GACAAACAGTTATAAAACGCCTCAAGAATGGAGAAGAACTCAAGGGTATATTCATCAAGCAAGT
GTTAGAAGACAGTCCTGCGGGGAAGACCAAGGCCCTTAAAACTGGAGATAAAATACTTGAGGTG
TCTGGTGTAGACCTGCAGAATGCCTCGCATGCAGAAGCCGTGGAGGCAATCAAGAGTGCAGGGA
ACCCTGTGGTGTTCGTGGTACAGAGCCTGTCATCCACCCCAAGGGTCATCCCAAGTGTGAATAA
CAAAGGCAAAACACCTCCCCAGAATCAGGACCAAAACACTCAAGAAAAGAAAGCTAAGAGGCAC
GGAACAGCTCCACCGCCAATGAAACTGCCCCCACCTTACAGAGCTCCCTCTGCAGACACTGAGG
AGAGTGAAGAAGACAGTGCCCTGACCGACAAAAAGATCAGGCAAAGATATGCAGACCTGCCTGG
AGAATTGCACATCATCGAACTGGAAAAGGATAAGAATGGACTGGGACTCAGTCTCGCTGGCAAC
AAGGACCGGTCACGGATGAGCATATTTGTGGTGGGGATTAACCCAGATGGACCTGCTGCTGCAG
ATGGACGGATGCGGGTTGGAGATGAGCTGCTAGAGATAAACAATCAGATCCTTTATGGAAGAAG
TCATCAGAATGCATCTGCCATTATTAAGACTGCCCCGACCAGGGTCAAACTGGTTTTCATTAGA
AACGAAGATGCAGTCAATCAGATGGCCGTCGCTCCCTTCCCCGTACCATCACATTCCCCATCGC
CTGTTGAGGATCTGGGTGGCACTGAACCTGTCAGTAGTGAGGAAGACAGCAGTGTGGATGCTAA
ACCCCTGCCTGAAAGAGAAAGCTCCAAGCCGGAAGACCTGACCCAGGCGGTTGATGACAGCATG
GTGGCAGAGCAGGAGAAGGCATCAGAGTCACCTGACAGTGCTGCCCGCCAGATGAAACAGCCAG
GATACTCAGCACAAGTCTCCTCCAGCTCACAAGAGATCCCGTCAGCACCAGCTCCCTTGTGTCA
GTCAACACATGCAGACGTCACAGGCTCTGGTAACTTCCAGGCTCCCCTCTCAGTGGACCCTGCT
CCTCTCTCAGTGGACCCTGCAACATGTCCCATTGTCCCTGGCCAAGAAATGATCATAGAAATAT
CCAAGGGGCGCTCCGGGCTTGGACTCAGCATCGTTGGAGGAAAGGACACGCCTTTGGATGCTAT
CGTTATCCATGAAGTCTATGAAGAAGGTGCAGCAGCCCGAGATGGAAGATTATGGGCTGGAGAC
CAGATATTAGAGGTTAATGGGGTTGATCTGAGGAGCTCCAGCCATGAAGAAGCCATCACAGCCC
TGAGGCAGACGCCCCAGAAGGTGAGGCTGGTGATATACAGAGATGAAGCACAGTACAGAGATGA
GGAGAACTTGGAGGTGTTCCTTGTGGATCTGCAGAAGAAGACTGGCCGAGGACTAGGCCTGAGC
ATTGTTGGGAAACGGAGTGGAAGCGGAGTGTTCATCTCTGACATTGTGAAAGGCGGAGCCGCAG
ACCTCGATGGGAGGCTAATTCGAGGAGACCAGATCTTGTCTGTGAATGGAGAGGACGTGAGACA
AGCCTCACAGGAGACAGTGGCCACCATCCTGAAGTGCGTCCAGGGCCTTGTCCAGCTGGAGATT
GGGAGACTCCGAGCCGGTTCCTGGGCCTCCTCGAGGAAGACCTCACAGAACAGCCAGGGAGATC
AGCACAGTGCACACAGCAGCTGTCGGCCTTCCTTTGCCCCAGTCATCACCAGCCTACAAAACCT
GGTTGGCACAAAAAGATCTTCAGATCCTCCCCAGAAATGCACAGAGGAGGAACCACGGACTGTT
GAGATAATCAGAGAGCTCAGTGATGCTCTTGGAGTCAGTATCGCTGGAGGAAAAGGAAGTCCTT
TAGGAGATATACCGATATTTATTGCCATGATTCAGGCCAATGGAGTGGCCGCACGTACCCAGAA
GCTGAAGGTTGGAGATCGGATTGTGAGCATTAATGGACAACCTCTGGACGGACTGTCTCACACA
GATGCCGTTAATCTACTAAAGAACGCCTTCGGGCGCATTATCCTGCAGGTCGTGGCAGACACCA
ACATCAGCGCCATAGCGACTCAGCTTGAAATGATGTCTGCAGGCTCCCAGCTTGGCTCTCCCAC
TGCTGACCGACATCCGCAAGACCCGGAGGAGCTGTTGCAGAGGACCGCCGATTAAAGCGAGGTG
GGCAGCTCTTCAGTGGTGTTACCCGGAAGGCGTTACCCGGAAGGCGTTACCCATGAGCAAGCTG
TCTCCATTCTAAAGCAGCAGAGAGGGGCCGTGGCCCTGCCTGCTGCTGCCGCCGTGAGCTACGG
GTCCTGACTTTTTAACGAGAATACAGCAGAATTATGCGGCTTCCGGTTGGGATGAAAAGTTGCC
TCGGCTCAAACCCAGTATCATCATTGGCTCTGATTCTGTTTACAGAAACTGGAGCTGTGGTCTC
TGCTTCCTACTCACATCCCCGGTTCCCACAGAGGCTTAACTGCAAACTCCTGTGGTTTCATCTA
ATGAGTAGAAACAAAGGTTTAGCTTGTCATCTTAACTCGTGATTTACTTATGCTAATTTGCCTC
TTCAAATAAACCAGAAAACATTAGCAGTGTAATTAACTTCCTCGCAATGAACTATTCATATGCT
ACCGCTGGGAATTACAGCAGACTGTTCTGTGTGACTCAGTCAAGTGGACCTCCCGTCCCTGTCT
CCGGATAGGTCTGTATGTTAGCCGTTGGCGATTCTGAGGAGTCCATTTACAGACGCTGTAAGCT
ACTCACCATCCTAATAGGCTTTGTTTCTGAGTTTGACAGCGCACACTCCACAGGAACAAGTAGC
CCTCCTGTTTGTGTTCTATCCACACTAGCTCACATTACTGGGAAGCTACTGGGAGTGATGGGCA
TCTTAGCAGGTCAAAATCACCGGTTCCCAACCCCTGCAGACTGCAGGCGAGGAGGTGGAAACCC
TAGACCACACTGCAGAGATAAGCAAGTTTGAGCGGCCTCAGCCCTATTGGAAGCGAGTTACAAG
TTTGGTTTGCCTCTCCTTCGCCTTCATACCAGTCTGCAGAGGGCTGTGTGCAGCCCTTGAACAT
AAAGGAACTGAGCAAATGCCCTGGGAATCAGACACAGAAGTGCTTAGCCCGAGTTTCCCAGTCT
CCGCTTCCTATTGGCTGAAGTTCTGTAGCTGAAACAGCAACTGTGGCTGAAGCCTAAGAGTGCT
TGTAGAGTGAAAGGGGCTGGGAAGGGAGATGCTCGTCACTGAGAACAAAGGAAAGTGCCATGAA
GGGTGAGTACAGGGTCAGCAGCAGACATAGTTTAGCATCCTAGAACTATAACTCAGTGCAGCAG
ATTGCTCAGCAATTACCCGGAGTTTAATGGGCCCTAATTTAAAATGTTATTTAACTAGTGAGGA
TGTTAACTGAAGTTCCCTTTGAGTAGATGTAATCACAAAGTGCACTGACTCTTGTTGAGATATT
TTTCGTGGCTATTAGAAAGTGCAGAATGCCTCACTTTTATGCTGACAGCGTATTGCGATGACCG
GCATTAAGGTTTTTTGAGATTCTATAGGTTTTTTTAGAATTTATAATGTATCTAAGATACATGG
TTTGGTTAGCATCTCATCCCCAGTTCATGAGAAGCCACCAACCTCAGTGTCCTGTGTGAATGGT
ACCCACAAGAAGACCTCAAGCAGCAGAAACCAAATGAAGCCCAATGAAAGTGCACCTTAAACAA
TAAAGATAGTGACATTAATGCTTTCCAAGTGGGATCCCGCTCACTTTTAATGGAATGGAATGGC
GTTAAATACACATATTGAAATAACGTGTTGTTTTGTCTTCATTTATACATCATCTGTTTAGGGG
ATGCCTCTCGAAGTCTATTAATGTAGTAACTGATACTTGATGCATCGAGTTCCTCAGGGACCCA
GTGAGTAATTGCTGTGCCCGAAATGGTGTGATCCCTTCAGAGCTTCCTACACACCGAGAATGCC
ACAATTGACAAGAGGAATTTTCTAAAAATTACACATACTACATTTTTGGCCCTTTAAGCCTAGT
ATTAGTGTTGTTAATTGGAGTGAGTCCAAGAGGTAAGCAAACTAGAAAACTAAAAGTTCAGAGT
GGTTTTCATGTAGATGTTTCTAAAGGTTCTGAATAAAGCAGCTGCCTAAGGAGCAAGAAGAGAC
ACGGTTGGTGCTGTCCACGTTTTA

hide sequence

RefSeq Acc Id:

XM_008763915 ⟹ XP_008762137

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	118,177,557 - 118,298,341 (+)	NCBI
mRatBN7.2	5	113,062,054 - 113,182,942 (+)	NCBI
Rnor_6.0	5	117,038,616 - 117,159,681 (+)	NCBI

Sequence:

show sequence

GTCCAGGTGAGGGCAGCAGCTGTACTTCCGCCAGGTGAGGAGGCCGTGATCGCAGCCTCGGGGC
TCCCACCCGGCTGTCGCCTGATCAGACTTAGGATTGAAAGTGCTTGAAAAGAGTGATCCAAAAT
GCCTGAAAACCCTGCTGCAGAGAAAATGCAGGTCCTGCAGGTCCTCGACCGCCTGAGGGGGAAG
CTGCAAGAGAAGGGAGACACGACGCAGAACGAGAAGCTGTCTGCGTTTTATGAGACGCTGAAGA
GCCCTCTCTTCAACCAGATCCTTACACTGCAGCAGTCCATCAAGCAGCTGAAGGGACAGCTCAG
CCATATCCCCTCAGATTGTTCAGCCAACTTTGACTTTTCTCGGAAGGGCTTGTTAGTGTTCACG
GATGGTTCCATTACAAATGGGAATGCCCACAGGCCTTGTAGTAGTATAACTGCATCTGAATCGT
TGCCTTGGACTCAAAGATCAGGAAATGAAGACTTTACCTCAGTCATTCAGCAGATGGCTCAGGG
CCGGCACATTGAGTATATAGATATAGAACGCCCTTCAACTGGAGGCCTTGGATTCAGTGTGGTG
GCTCTGAGAAGCCAAAGTCTGGGATTAATTGACATCTTTGTGAAGGAAGTCCATCCGGGGAGTG
TAGCAGACAGGGATCAGAGATTGAAGGAAAATGACCAGATTTTGGCCATTAATGACACCCCATT
GGATCAGAATATTTCCCATCAGCAGGCGATTGCATTACTACAACAAGCCACTGGATCTCTGCGG
CTGGTTGTGGCCAGGGAAGTGGGCCACACACAGAGCCGAACATCCACCAGCTCAGCTGATACAA
CTCTGCCAGAAACGGTGCGTTGGGGCCACACTGAAGATGTTGAGCTCATTAATGATGGCTCTGG
ATTAGGTTTTGGGATAGTTGGAGGCAAATCCAGTGGTGTGGTCGTGAGGACTATTGTCCCTGGA
GGATTGGCGGACCGAGATGGAAGACTACAGACAGGGGACCACATCTTAAAGATTGGAAGTACAA
ACGTGCAAGGAATGACCAGTGAACAAGTTGCTCAGGTGCTAAGAAATTGTGGGAATTCAGTGAG
GATGCTGGTGGCCAGAGACCCTGTTGGTGAAATTGCAGTAACACCTCCGACGCCTGCATCCTTA
CCTGTTGCCCTCCCTGTTGTAGCCACAAGGACCCTTGGTTCTGACAGTTCTCCTTTTGAGACTT
ACAATGTTGAACTTGTCAAAAAAGATGGACAGAGTCTTGGGATTAGAATTGTTGGCTATGTTGG
AACAGCTCATCCAGGGGAAGCTTCAGGGATTTATGTGAAAAGTATAATCCCAGGCAGCGCTGCA
TACCACAATGGCCAAATTCAAGTGAACGATAAAATTGTGGCTGTGGATGGTGTGAATATTCAGG
GTTTTGCCAATCAGGACGTTGTTGAAGTTCTGCGGAACGCAGGGCAGGTGGTGCACCTGACCCT
AGTTCGAAGGAAAACATCTTTATCTGCTTCTCCATTTGAACAACCTTCAAGCAGAGAAGCTGTT
GCAGAACCACCTGAAGTGCCAGAACTAACTGGATCCCTGAAACCAGAAACTAATTCGAGAATGG
AAGCAGAGGAAATCGGAGAAAGACTGGATAATCTGAGAAAGGACACCGTACAAGCCTTAGAAAA
ACCAGACGTATATCCAGAGGACATCCCAGGCTGTCCAGAAAATGAGCTGAAATCCAGATGGGAA
AACCTACTGGGCCCAGATTATGAAGTAATGGTAGCCACGTTGGACACGCAGATAGCAGATGATG
AGGAGCTTCAGAAGTACTCCAAGCTGCTGCCTATCCACACTCTGAGGCTTGGTATGGAGGTGGA
CTCCTTCGATGGGCACCACTATATCTCCTCCATTGCTCCTGGGGGTCCTGTGGATACCCTGAAC
CTCCTGCAGCCAGAGGATGAGCTTCTCGAGGTCAATGGCGTGCAGCTTTATGGGAAGTCTCGCC
GAGAAGCAGTCTCCTTTCTTAAAGAAGTGCCCCCACCATTTACCTTGGTTTGCTGCCGCCGGCT
GTTTGATGACGAGGCCTCAGTTGATGAGCCGAGAACTGTGGAACCTTCTCTTCTTGAGGCAGAG
GTCGACCGCAGTGTAGATGTCAGCACTGAAGATGATGATGGAGAATTAGCCCTGTGGTCTCCTG
AAGTCAAGACTGTGGAGCTGGTCAAAGACTGCAAAGGCTTAGGATTCAGCATTTTGGATTATCA
GGACCCCCTGGATCCCATGAGGTCAGTGATTGTGATTCGCTCCTTGGTGGCAGATGGCGTAGCA
GAAAGAAGTGGAGAACTTTTGCCTGGAGATCGCCTAGTCTCCGTCAATGAGTTCTCTCTGGACA
ATGCCACTCTTGCTGAGGCTGTGGAAGTGTTGAAGGCTGTACCCCCAGGTGTGGTGCACCTTGG
CATCTGTAAGCCTTTGGTGGAGGAGGAGAAGGAGGAGAAGGAGGAACATTTTATTTTCCATTCA
AACAACAATGGAGATAACAGTGAGTCTCCAGAAACCGTTCACGAGATCCACTCATCTTTAATCC
TCGAGGCACCCCAGGGATTTAGAGATGAGCCGTATCTTGAAGAACTCGTGGATGAACCTTTTCT
AGATTTGGGAAAGTCTTTGCAGTTCCAACAAAAAGACATGGACAGCAGCTCAGAAGCCTGGGAA
ATGCATGAATTCCTGAGCCCTCGGCTGGAGAGAAGGGGTGAGGAAAGAGAGATGCTTGTTGACG
AGGAGTATGAGATCTACCAAGACCGCCTCCGGGACATGGAAGCACACCCACCACCTCCTCACAT
TCGGGAGCCCACTTCTGCATCTCCCAGGCTGGATCTCCAGGCCGGCCCCCAGTGGCTGCATGCT
GACCTCTCAGGAGGAGAGATACTCGAGTGTCACGACACAGAGTCCATGATGACTGCTTATCCCC
AGGAGATGCAGGACTATAGCTTCAGCACCACAGACATGATGAAAGAAACATTTGGCCTTGACTC
CCGGCCGCCCATGCCCTCCTCTGAAGGAAATGGTCAGCACGGCCGATTTGATGACTTGGAACAT
CTTCACTCACTAGTGAGCCACGGCCTGGATTTAGGCATGATGACTCCAAGTGACTTGCAAGGCC
CTGGCGTGCTTGTAGATCTTCCAGCTGTCACCCAAAGAAGAGAACAGGAAGAGTTGCCCCTGTA
CCGACTCCCCAGTGCCCGTGTGGTCACCAAGCCTTCCTCGCACGTGGGAATGGTGTCTTCACGA
CATGCAAATGCTGCATGGGAAATGGACAAATACTGATGAGGGTCTGAGTGAAGGAAACCCTCTC
ATCGCTGTAAGGACGGCGAGCTGGTCCAGCCTCCATGCAAGATGGGTTGACAGCTTCTTAAAAA
TTAGATCCAGCACATGATCTCCACACTACGCCCGCCTTGGGTGTTTGCACAAAGGCCTCAACCC
AGCACACCAGAGACACTTGCATATCCACGTCTGCTGCAGCACTGCTCGTGGCCAAGTCATGGCA
CCAGCCTCTGTGCCCAACAGCAGGAGTGAGTGAGGAAACTGTGGTGAATATTCCCAATGGAATT
CTTTTCAGCCATAAAGACTAGGAATGCTATGCCATTGGCAAGAAGGTGGGTGCAACTCAAGTTA
TTAAGTGAATCAAGAAGCAAGTAAATTGTCAGGAAGACAATGCATATTTTTCTTATATGTGCTC
CTGGATTTTATATTGATATGTAAAACCATATCACTTGAAAGCAATAGTATAATTGTGTAGAGAA
ACAAGCAGTGTTAACCGGAGGGGTCAGGGAGGGAACACAATACCTTTCATATCAAATATATATG
GAATGAAATCTCTTTAGGATGCAAAGCAGACTGGCAGGATGGTCCAGCAGGTGAAAGGAATCTG
CCTCCAAACACTTGAGTTCAGTCCCTGGGACCCACATGCTGAAGGAGAGACTTAACTTCCACAG
CTTATCCTGTGACCTCATACATGCGCTGTGGCACATACCCGTTCACCTAGACAGCCTCTCCCAC
AAATGGTCCTAGGGAACCAGTGTCTATAAGTAACAGAATGAAACCCGATCCTTATTTACCCTGC
ACCAATATCTATTGATATATCAAAACTGTGATGTAAAACCAAAAATTCAAGTATTCAATGAAAA
AAAACTGAAACGTTCAGTTTGGGTAGCCTTCACAAGCTTCAGACTTTTTTTCCTGTGAAATAAT
CTTATTAAAGTATGTGTCCTCTGCTGCTTGAAGGTGATGAAAGGTACTGCTCTCTTCCAGTAGC
AGAATCCCTGTGTTACATCCTTAGCAAAGAAAAGCAGTTGTCGTGTGTCAGACACTGCCTTGCC
TCCTCCCTCTGGGAAGCTATGAGTCACTGTTAGCCTCAAATGTCAACCTGACACAACCTAGAGT
CACCAAGAAGAGAGAAGCACAGTTGAGTGACGCTGTCCTGTGGCCAGCCTGTGGGCATTTTCAT
GATTGATAATTGGTGGAGAAGGGCCTAGCCCACTGTGGGCTTTGGATGTACAAGAAAATTAGCT
GGTTGTGAGCCATGGAGAGCGTTGCATACCTTTTTTTGTGGTCTGCTTCAGTCCCTGCTTTGGC
TTCCCTAGATGGTAGGATTGTAAGCTCTACAATAAAATAGAGCCTTTCCTCCCCAAATTGCTTT
GGTCCTGGTGAGGGATGCAACTCCT

hide sequence

RefSeq Acc Id:

XM_008763916 ⟹ XP_008762138

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	118,323,416 - 118,479,916 (+)	NCBI
mRatBN7.2	5	113,207,170 - 113,364,422 (+)	NCBI
Rnor_6.0	5	117,181,442 - 117,339,923 (+)	NCBI

Sequence:

show sequence

CACACACACATACACCCCTTGTCAGTATGGGCCACTAATTTCCTAATAAGAGAAAAACTAGAAA
CCATAGGAGCACTGCAGTCAGGAGTGTGTAACAGCTGGGATATCCAGTAGCTGTGTGTTTGTCT
CACACTAGGGCTCTGGGTCTCTAAAGCAGTCCAGAAGAGTAATGTGGTTTTAACCCAAATCCTA
AGTGAAATATACTGTTGGTTAATATGAGAACTTGACATTCTTTTGACTTGTAAATGAAATTTTG
GAAAATAAAAAGAGAGTAGAGAACTCTACCTTCCACTGCTCTGATTGGTGGTTACCCCCATTCT
GTGTAGGGCCATGCCATGTGCCACTGTCTTAGCTGAGTGACTCTTTGTCGTAGGACTGTCTTTG
CACGGGAAGATACATATCAGTACATCAGGTCTGCATGGGCTAGATACAGTTAGATGGCAACAGC
ATCTTTCCAACCACTTTAGGTGTGACCATGGCTCCAGCCATTGCCAGGCGTCCACTGGACTCAT
TAGAAATAGGGATTCAGTTGTTACTTGTTGGGACTTGAAGGGATAATCCTACTCACCGAAGTGC
TTTAGGGGTGGGTTTAGGCTTCCTGGAATTTTGAGGCTTGTTCTAAAAGTGATACATTGTAATG
AACAGAAGCTACTTAGGAAAGAAAGAGTGTGTTTGGCTTTTGGTTCCAGAGGACCGGAGCCGAT
AACCAGAAGGAAGGCATGGGGGCAAAAACAGGAAGCTGAGAACAGAGAGTATGAACTGCAAGTC
CAGTGTGGCCATAAACTCTTAAAGCCTGCCCTCAGTCCATGGCTTCCTCTTGCAAAGGTTCCAG
AACCTCCCCAGACAGCACCACTAACTAGGGACCAATACCTGAGCCTATGGGGGACACTTCCCAT
TCAAACCACTACAGTTCTTTAAATGTATTAAAATCACTGACTTATGCATTTGTTACATACAGTT
GTACTTGATACATATATTCAAATCATATGCATTCGAGGGATAGTTGAAGTTATGAACAGGTCTC
CACTAAAGGAGGAGTGGAAATCAAGTAGCATGCTGTTCTAAAGAAGGGAAAGAAAATCACTTGT
CTTCTCTGATTTGGGGGTGGGCTATTTCAGTGTTGCAAAGTGCACCTGAGGTTTGTCAAATTTT
GTGGCTGAGAATCCCGAGACCAAGAGTCACTAATTTGCCCCAAATCACAAAATGGGGTACTGAT
GAGGCAGAGGTAGACCCGGGTGTCACTTTTAAACCCTGCACCCAGTGCTCGCCTCTGTTTTTAG
TGTGGAGCAAACACTTGGGGAACAAAGGTCTCTTGTGCATCCATGGCCTCCTCGGCTGATCTCT
GCCTCACCAATAGATGTCACTGTAGTCAACAGTAGTTGCTAACCCAGCATGGAGCTTTGAGGAT
GCTCACCAATGGCAGGCAGGGGTGACTGGTGTCACAGGCTACAGCATGCAGTCCCTATGTGTGC
AGGGTGACCGAGCGTCAGAGCCAGAAGCAGCCTGCAGCATCCGAGACTCTGACTGGAGGACCAG
GGATTGCCTTTCGCTGGCAGACCTCTCCAGGCAGCTCTCGCCTACCGGCAGATGTGACTGTGAG
CTTGGGGAAGAGATTGAAATGAGCTTAATTGATTATTTCCCACAGTAGAACACAATGACAGGTT
GCCCTTTAAAAGAATAAAATCTGAGGGAAAAAAGACTATAGGCCCAAGGTCGTGAGAAGAGAGG
ACAGAGTCGGTGGAGAGAGTGGAACTGCTTCCAGCATCGACCTGTGAGGAATGCAGCAGCCCTG
AAGGGAGCCGTCCTGCAGCATGGTCCACGGGGGGTTCCCAGAAAAGATCAGGCAAAGATATGCA
GACCTGCCTGGAGAATTGCACATCATCGAACTGGAAAAGGATAAGAATGGACTGGGACTCAGTC
TCGCTGGCAACAAGGACCGGTCACGGATGAGCATATTTGTGGTGGGGATTAACCCAGATGGACC
TGCTGCTGCAGATGGACGGATGCGGGTTGGAGATGAGCTGCTAGAGATAAACAATCAGATCCTT
TATGGAAGAAGTCATCAGAATGCATCTGCCATTATTAAGACTGCCCCGACCAGGGTCAAACTGG
TTTTCATTAGAAACGAAGATGCAGTCAATCAGATGGCCGTCGCTCCCTTCCCCGTACCATCACA
TTCCCCATCGCCTGTTGAGGATCTGGGTGGCACTGAACCTGTCAGTAGTGAGGAAGACAGCAGT
GTGGATGCTAAACCCCTGCCTGAAAGAGAAAGCTCCAAGCCGGAAGACCTGACCCAGGCGGTTG
ATGACAGCATGGTGGCAGAGCAGGAGAAGGCATCAGAGTCACCTGACAGTGCTGCCCGCCAGAT
GAAACAGCCAGGATACTCAGCACAAGTCTCCTCCAGCTCACAAGAGATCCCGTCAGCACCAGCT
CCCTTGTGTCAGTCAACACATGCAGACGTCACAGGCTCTGGTAACTTCCAGGCTCCCCTCTCAG
TGGACCCTGCTCCTCTCTCAGTGGACCCTGCAACATGTCCCATTGTCCCTGGCCAAGAAATGAT
CATAGAAATATCCAAGGGGCGCTCCGGGCTTGGACTCAGCATCGTTGGAGGAAAGGACACGCCT
TTGGATGCTATCGTTATCCATGAAGTCTATGAAGAAGGTGCAGCAGCCCGAGATGGAAGATTAT
GGGCTGGAGACCAGATATTAGAGGTTAATGGGGTTGATCTGAGGAGCTCCAGCCATGAAGAAGC
CATCACAGCCCTGAGGCAGACGCCCCAGAAGGTGAGGCTGGTGATATACAGAGATGAAGCACAG
TACAGAGATGAGGAGAACTTGGAGGTGTTCCTTGTGGATCTGCAGAAGAAGACTGGCCGAGGAC
TAGGCCTGAGCATTGTTGGGAAACGGAGTGGAAGCGGAGTGTTCATCTCTGACATTGTGAAAGG
CGGAGCCGCAGACCTCGATGGGAGGCTAATTCGAGGAGACCAGATCTTGTCTGTGAATGGAGAG
GACGTGAGACAAGCCTCACAGGAGACAGTGGCCACCATCCTGAAGTGCGTCCAGGGCCTTGTCC
AGCTGGAGATTGGGAGACTCCGAGCCGGTTCCTGGGCCTCCTCGAGGAAGACCTCACAGAACAG
CCAGGGAGATCAGCACAGTGCACACAGCAGCTGTCGGCCTTCCTTTGCCCCAGTCATCACCAGC
CTACAAAACCTGGTTGGCACAAAAAGATCTTCAGATCCTCCCCAGAAATGCACAGAGGAGGAAC
CACGGACTGTTGAGATAATCAGAGAGCTCAGTGATGCTCTTGGAGTCAGTATCGCTGGAGGAAA
AGGAAGTCCTTTAGGAGATATACCGATATTTATTGCCATGATTCAGGCCAATGGAGTGGCCGCA
CGTACCCAGAAGCTGAAGGTTGGAGATCGGATTGTGAGCATTAATGGACAACCTCTGGACGGAC
TGTCTCACACAGATGCCGTTAATCTACTAAAGAACGCCTTCGGGCGCATTATCCTGCAGGTCGT
GGCAGACACCAACATCAGCGCCATAGCGACTCAGCTTGAAATGATGTCTGCAGGCTCCCAGCTT
GGCTCTCCCACTGCTGACCGACATCCGCAAGACCCGGAGGAGCTGTTGCAGAGGACCGCCGATT
AAAGCGAGGTGGGCAGCTCTTCAGTGGTGTTACCCGGAAGGCGTTACCCGGAAGGCGTTACCCA
TGAGCAAGCTGTCTCCATTCTAAAGCAGCAGAGAGGGGCCGTGGCCCTGCCTGCTGCTGCCGCC
GTGAGCTACGGGTCCTGACTTTTTAACGAGAATACAGCAGAATTATGCGGCTTCCGGTTGGGAT
GAAAAGTTGCCTCGGCTCAAACCCAGTATCATCATTGGCTCTGATTCTGTTTACAGAAACTGGA
GCTGTGGTCTCTGCTTCCTACTCACATCCCCGGTTCCCACAGAGGCTTAACTGCAAACTCCTGT
GGTTTCATCTAATGAGTAGAAACAAAGGTTTAGCTTGTCATCTTAACTCGTGATTTACTTATGC
TAATTTGCCTCTTCAAATAAACCAGAAAACATTAGCAGTGTAATTAACTTCCTCGCAATGAACT
ATTCATATGCTACCGCTGGGAATTACAGCAGACTGTTCTGTGTGACTCAGTCAAGTGGACCTCC
CGTCCCTGTCTCCGGATAGGTCTGTATGTTAGCCGTTGGCGATTCTGAGGAGTCCATTTACAGA
CGCTGTAAGCTACTCACCATCCTAATAGGCTTTGTTTCTGAGTTTGACAGCGCACACTCCACAG
GAACAAGTAGCCCTCCTGTTTGTGTTCTATCCACACTAGCTCACATTACTGGGAAGCTACTGGG
AGTGATGGGCATCTTAGCAGGTCAAAATCACCGGTTCCCAACCCCTGCAGACTGCAGGCGAGGA
GGTGGAAACCCTAGACCACACTGCAGAGATAAGCAAGTTTGAGCGGCCTCAGCCCTATTGGAAG
CGAGTTACAAGTTTGGTTTGCCTCTCCTTCGCCTTCATACCAGTCTGCAGAGGGCTGTGTGCAG
CCCTTGAACATAAAGGAACTGAGCAAATGCCCTGGGAATCAGACACAGAAGTGCTTAGCCCGAG
TTTCCCAGTCTCCGCTTCCTATTGGCTGAAGTTCTGTAGCTGAAACAGCAACTGTGGCTGAAGC
CTAAGAGTGCTTGTAGAGTGAAAGGGGCTGGGAAGGGAGATGCTCGTCACTGAGAACAAAGGAA
AGTGCCATGAAGGGTGAGTACAGGGTCAGCAGCAGACATAGTTTAGCATCCTAGAACTATAACT
CAGTGCAGCAGATTGCTCAGCAATTACCCGGAGTTTAATGGGCCCTAATTTAAAATGTTATTTA
ACTAGTGAGGATGTTAACTGAAGTTCCCTTTGAGTAGATGTAATCACAAAGTGCACTGACTCTT
GTTGAGATATTTTTCGTGGCTATTAGAAAGTGCAGAATGCCTCACTTTTATGCTGACAGCGTAT
TGCGATGACCGGCATTAAGGTTTTTTGAGATTCTATAGGTTTTTTTAGAATTTATAATGTATCT
AAGATACATGGTTTGGTTAGCATCTCATCCCCAGTTCATGAGAAGCCACCAACCTCAGTGTCCT
GTGTGAATGGTACCCACAAGAAGACCTCAAGCAGCAGAAACCAAATGAAGCCCAATGAAAGTGC
ACCTTAAACAATAAAGATAGTGACATTAATGCTTTCCAAGTGGGATCCCGCTCACTTTTAATGG
AATGGAATGGCGTTAAATACACATATTGAAATAA

hide sequence

RefSeq Acc Id:

XM_039109186 ⟹ XP_038965114

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	118,177,557 - 118,479,916 (+)	NCBI
mRatBN7.2	5	113,062,054 - 113,364,422 (+)	NCBI

RefSeq Acc Id:

XM_039109188 ⟹ XP_038965116

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	118,177,557 - 118,479,916 (+)	NCBI
mRatBN7.2	5	113,062,054 - 113,364,422 (+)	NCBI

RefSeq Acc Id:

XM_063287100 ⟹ XP_063143170

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	118,177,557 - 118,479,916 (+)	NCBI

RefSeq Acc Id:

XM_063287101 ⟹ XP_063143171

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	118,177,557 - 118,479,916 (+)	NCBI

RefSeq Acc Id:

XM_063287102 ⟹ XP_063143172

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	118,177,557 - 118,479,916 (+)	NCBI

RefSeq Acc Id:

XM_063287103 ⟹ XP_063143173

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	118,326,581 - 118,479,916 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_536323	(Get FASTA)	NCBI Sequence Viewer
	XP_008762137	(Get FASTA)	NCBI Sequence Viewer
	XP_008762138	(Get FASTA)	NCBI Sequence Viewer
	XP_038965114	(Get FASTA)	NCBI Sequence Viewer
	XP_038965116	(Get FASTA)	NCBI Sequence Viewer
	XP_063143170	(Get FASTA)	NCBI Sequence Viewer
	XP_063143171	(Get FASTA)	NCBI Sequence Viewer
	XP_063143172	(Get FASTA)	NCBI Sequence Viewer
	XP_063143173	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAL36559	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000010211
	ENSRNOP00000010211.6
	ENSRNOP00000077045
	ENSRNOP00000079221
	ENSRNOP00000097148
	ENSRNOP00000105981
GenBank Protein	F1MAD2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_008762137 ⟸ XM_008763915

- Peptide Label:

isoform X6

- Sequence:

show sequence

MPENPAAEKMQVLQVLDRLRGKLQEKGDTTQNEKLSAFYETLKSPLFNQILTLQQSIKQLKGQL
SHIPSDCSANFDFSRKGLLVFTDGSITNGNAHRPCSSITASESLPWTQRSGNEDFTSVIQQMAQ
GRHIEYIDIERPSTGGLGFSVVALRSQSLGLIDIFVKEVHPGSVADRDQRLKENDQILAINDTP
LDQNISHQQAIALLQQATGSLRLVVAREVGHTQSRTSTSSADTTLPETVRWGHTEDVELINDGS
GLGFGIVGGKSSGVVVRTIVPGGLADRDGRLQTGDHILKIGSTNVQGMTSEQVAQVLRNCGNSV
RMLVARDPVGEIAVTPPTPASLPVALPVVATRTLGSDSSPFETYNVELVKKDGQSLGIRIVGYV
GTAHPGEASGIYVKSIIPGSAAYHNGQIQVNDKIVAVDGVNIQGFANQDVVEVLRNAGQVVHLT
LVRRKTSLSASPFEQPSSREAVAEPPEVPELTGSLKPETNSRMEAEEIGERLDNLRKDTVQALE
KPDVYPEDIPGCPENELKSRWENLLGPDYEVMVATLDTQIADDEELQKYSKLLPIHTLRLGMEV
DSFDGHHYISSIAPGGPVDTLNLLQPEDELLEVNGVQLYGKSRREAVSFLKEVPPPFTLVCCRR
LFDDEASVDEPRTVEPSLLEAEVDRSVDVSTEDDDGELALWSPEVKTVELVKDCKGLGFSILDY
QDPLDPMRSVIVIRSLVADGVAERSGELLPGDRLVSVNEFSLDNATLAEAVEVLKAVPPGVVHL
GICKPLVEEEKEEKEEHFIFHSNNNGDNSESPETVHEIHSSLILEAPQGFRDEPYLEELVDEPF
LDLGKSLQFQQKDMDSSSEAWEMHEFLSPRLERRGEEREMLVDEEYEIYQDRLRDMEAHPPPPH
IREPTSASPRLDLQAGPQWLHADLSGGEILECHDTESMMTAYPQEMQDYSFSTTDMMKETFGLD
SRPPMPSSEGNGQHGRFDDLEHLHSLVSHGLDLGMMTPSDLQGPGVLVDLPAVTQRREQEELPL
YRLPSARVVTKPSSHVGMVSSRHANAAWEMDKY

hide sequence

RefSeq Acc Id:	XP_008762138 ⟸ XM_008763916
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I6GME4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVHGGFPEKIRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPDGPAAADGR MRVGDELLEINNQILYGRSHQNASAIIKTAPTRVKLVFIRNEDAVNQMAVAPFPVPSHSPSPVE DLGGTEPVSSEEDSSVDAKPLPERESSKPEDLTQAVDDSMVAEQEKASESPDSAARQMKQPGYS AQVSSSSQEIPSAPAPLCQSTHADVTGSGNFQAPLSVDPAPLSVDPATCPIVPGQEMIIEISKG RSGLGLSIVGGKDTPLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRSSSHEEAITALRQ TPQKVRLVIYRDEAQYRDEENLEVFLVDLQKKTGRGLGLSIVGKRSGSGVFISDIVKGGAADLD GRLIRGDQILSVNGEDVRQASQETVATILKCVQGLVQLEIGRLRAGSWASSRKTSQNSQGDQHS AHSSCRPSFAPVITSLQNLVGTKRSSDPPQKCTEEEPRTVEIIRELSDALGVSIAGGKGSPLGD IPIFIAMIQANGVAARTQKLKVGDRIVSINGQPLDGLSHTDAVNLLKNAFGRIILQVVADTNIS AIATQLEMMSAGSQLGSPTADRHPQDPEELLQRTAD hide sequence

RefSeq Acc Id:

NP_536323 ⟸ NM_080398

- UniProtKB:

F1MAD2 (UniProtKB/Swiss-Prot), A0A8I6AG04 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPENPAAEKMQVLQVLDRLRGKLQEKGDTTQNEKLSAFYETLKSPLFNQILTLQQSIKQLKGQL
SHIPSDCSANFDFSRKGLLVFTDGSITNGNAHRPCSSITASESLPWTQRSGNEDFTSVIQQMAQ
GRHIEYIDIERPSTGGLGFSVVALRSQSLGLIDIFVKEVHPGSVADRDQRLKENDQILAINDTP
LDQNISHQQAIALLQQATGSLRLVVAREVGHTQSRTSTSSADTTLPETVRWGHTEDVELINDGS
GLGFGIVGGKSSGVVVRTIVPGGLADRDGRLQTGDHILKIGSTNVQGMTSEQVAQVLRNCGNSV
RMLVARDPVGEIAVTPPTPASLPVALPVVATRTLGSDSSPFETYNVELVKKDGQSLGIRIVGYV
GTAHPGEASGIYVKSIIPGSAAYHNGQIQVNDKIVAVDGVNIQGFANQDVVEVLRNAGQVVHLT
LVRRKTSLSASPFEQPSSREAVAEPPEVPELTGSLKPETNSRMEAEEIGERLDNLRKDTVQALE
KPDVYPEDIPGCPENELKSRWENLLGPDYEVMVATLDTQIADDEELQKYSKLLPIHTLRLGMEV
DSFDGHHYISSIAPGGPVDTLNLLQPEDELLEVNGVQLYGKSRREAVSFLKEVPPPFTLVCCRR
LFDDEASVDEPRTVEPSLLEAEVDRSVDVSTEDDDGELALWSPEVKTVELVKDCKGLGFSILDY
QDPLDPMRSVIVIRSLVADGVAERSGELLPGDRLVSVNEFSLDNATLAEAVEVLKAVPPGVVHL
GICKPLVEEEKEEKEEHFIFHSNNNGDNSESPETVHEIHSSLILEAPQGFRDEPYLEELVDEPF
LDLGKSLQFQQKDMDSSSEAWEMHEFLSPRLERRGEEREMLVDEEYEIYQDRLRDMEAHPPPPH
IREPTSASPRLDLQAGPQWLHADLSGGEILECHDTESMMTAYPQEMQDYSFSTTDMMKETFGLD
SRPPMPSSEGNGQHGRFDDLEHLHSLVSHGLDLGMMTPSDLQGPGVLVDLPAVTQRREQEELPL
YRLPSARVVTKPSSHVGMVSSRHANAACELPEREEGEGEETPNFSHWGPPRIVEIFREPNVSLG
ISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTKALKTGDKILEVSGVDLQNASHAEAVEA
IKSAGNPVVFVVQSLSSTPRVIPSVNNKGKTPPQNQDQNTQEKKAKRHGTAPPPMKLPPPYRAP
SADTEESEEDSALTDKKIRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPD
GPAAADGRMRVGDELLEINNQILYGRSHQNASAIIKTAPTRVKLVFIRNEDAVNQMAVAPFPVP
SHSPSPVEDLGGTEPVSSEEDSSVDAKPLPERESSKPEDLTQAVDDSMVAEQEKASESPDSAAR
QMKQPGYSAQVSSSSQEIPSAPAPLCQSTHADVTGSGNFQAPLSVDPAPLSVDPATCPIVPGQE
MIIEISKGRSGLGLSIVGGKDTPLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRSSSHE
EAITALRQTPQKVRLVIYRDEAQYRDEENLEVFLVDLQKKTGRGLGLSIVGKRSGSGVFISDIV
KGGAADLDGRLIRGDQILSVNGEDVRQASQETVATILKCVQGLVQLEIGRLRAGSWASSRKTSQ
NSQGDQHSAHSSCRPSFAPVITSLQNLVGTKRSSDPPQKCTEEEPRTVEIIRELSDALGVSIAG
GKGSPLGDIPIFIAMIQANGVAARTQKLKVGDRIVSINGQPLDGLSHTDAVNLLKNAFGRIILQ
VVADTNISAIATQLEMMSAGSQLGSPTADRHPQDPEELLQRTAD

hide sequence

Ensembl Acc Id:

ENSRNOP00000010211 ⟸ ENSRNOT00000010211

RefSeq Acc Id:	XP_038965114 ⟸ XM_039109186
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZMD2 (UniProtKB/TrEMBL), A0A8I6AG04 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038965116 ⟸ XM_039109188
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6AG04 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000077045 ⟸ ENSRNOT00000101438

Ensembl Acc Id:

ENSRNOP00000092161 ⟸ ENSRNOT00000094178

Ensembl Acc Id:

ENSRNOP00000079221 ⟸ ENSRNOT00000095175

Ensembl Acc Id:

ENSRNOP00000097148 ⟸ ENSRNOT00000103328

RefSeq Acc Id:	XP_063143171 ⟸ XM_063287101
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AG04 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063143172 ⟸ XM_063287102
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I5ZJD2 (UniProtKB/TrEMBL), A0A8I6AG04 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063143170 ⟸ XM_063287100
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AG04 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063143173 ⟸ XM_063287103
- Peptide Label:	isoform X7

Ensembl Acc Id:

ENSRNOP00000103339 ⟸ ENSRNOT00000132099

Ensembl Acc Id:

ENSRNOP00000105981 ⟸ ENSRNOT00000165802

Protein Domains

L27 PDZ

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F1MAD2-F1-model_v2	AlphaFold	F1MAD2	1-1836	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1565362	AgrOrtholog
BioCyc Gene	G2FUF-40588	BioCyc
Ensembl Genes	ENSRNOG00000007551	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000010211	ENTREZGENE
	ENSRNOT00000010211.9	UniProtKB/Swiss-Prot
	ENSRNOT00000095175	ENTREZGENE
	ENSRNOT00000101438	ENTREZGENE
	ENSRNOT00000103328	ENTREZGENE
	ENSRNOT00000165802	ENTREZGENE
Gene3D-CATH	1.20.1440.360	UniProtKB/Swiss-Prot
	2.30.42.10	UniProtKB/Swiss-Prot
InterPro	L27_2	UniProtKB/Swiss-Prot
	L27_dom	UniProtKB/Swiss-Prot
	L27_dom_sf	UniProtKB/Swiss-Prot
	PDZ	UniProtKB/Swiss-Prot
	PDZ_scaffold	UniProtKB/Swiss-Prot
	PDZ_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:140581	UniProtKB/Swiss-Prot
NCBI Gene	Patj	ENTREZGENE
PANTHER	INAD-LIKE PROTEIN	UniProtKB/Swiss-Prot
	MULTIPLE PDZ DOMAIN PROTEIN	UniProtKB/Swiss-Prot
Pfam	L27_2	UniProtKB/Swiss-Prot
	PDZ	UniProtKB/Swiss-Prot
PhenoGen	Patj	PhenoGen
PROSITE	L27	UniProtKB/Swiss-Prot
	PDZ	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000007551	RatGTEx
SMART	L27	UniProtKB/Swiss-Prot
	PDZ	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF101288	UniProtKB/Swiss-Prot
	SSF50156	UniProtKB/Swiss-Prot
UniProt	A0A8I5ZJD2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZMD2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AG04	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GME4	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LS64_RAT	UniProtKB/TrEMBL
	A0ABK0LUK2_RAT	UniProtKB/TrEMBL
	F1MAD2	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-07-18	Inadl	InaD-like (Drosophila)	Inadl2	InaD-like 2 (Drosophila)	Data merged from RGD:621378	737654	APPROVED
2008-03-20	Inadl2	InaD-like 2 (Drosophila)	Inadl	InaD-like (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-20	Inadl	InaD-like (Drosophila)	RGD1565362_predicted	similar to channel-interacting PDZ domain protein isoform 1 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1565362_predicted	similar to channel-interacting PDZ domain protein isoform 1 (predicted)	LOC313382	similar to channel-interacting PDZ domain protein isoform 1	Symbol and Name status set to approved	1299863	APPROVED
2005-01-20	Inadl	InaD-like (Drosophila)		PDZ domain protein (Drosophila inaD-like)	Name updated	1299863	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_function	may participate in TRPC3 protein mediated 1alpha,25(OH)(2)D(3) modulation of CCE in muscle and osteoblastic cells	1304343

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD