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Gene: Slc26a10 (solute carrier family 26, member 10) Rattus norvegicus

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Symbol:

Slc26a10

Name:

solute carrier family 26, member 10

RGD ID:

1564851

Description:

Predicted to enable inorganic anion transmembrane transporter activity and organic anion transmembrane transporter activity. Predicted to be involved in chloride transmembrane transport and sulfate transmembrane transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human SLC26A10P (solute carrier family 26 member 10, pseudogene); INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC366909; RGD1564851; similar to putative anion transporter; solute carrier family 26 member 10

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLC26A10P (solute carrier family 26 member 10, pseudogene)	HGNC	EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Slc26a10 (solute carrier family 26, member 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Slc26a10p (Solute carrier family 26 member 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLC26A10P (Solute carrier family 26 member 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SLC26A10 (solute carrier family 26 member 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	LOC101959649 (solute carrier family 26 member 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLC26A10 (solute carrier family 26 member 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	LOC103238577 (putative solute carrier family 26 member 10P)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slc26a10p (Solute carrier family 26 member 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	KCTD14 (potassium channel tetramerization domain containing 14)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	SLC26A10P (solute carrier family 26 member 10, pseudogene)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	SLC26A10P (solute carrier family 26 member 10, pseudogene)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Slc26a10 (solute carrier family 26, member 10)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slc26a10 (solute carrier family 26 member 10)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Prestin	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	Prestin	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	YPR003C	Alliance	DIOPT (Hieranoid\|InParanoid\|PANTHER)
Caenorhabditis elegans (roundworm):	sulp-1	Alliance	DIOPT (OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	sulp-2	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	sulp-2	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	sulp-4	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	sulp-5	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	sulp-5	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	sulp-6	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	sulp-8	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	sulp-8	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	slc26a10	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	slc26a10	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	64,880,694 - 64,890,340 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	64,880,699 - 64,889,409 (-)	Ensembl				GRCr8
mRatBN7.2	7	62,995,165 - 63,005,099 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	62,995,381 - 63,004,087 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	64,884,673 - 64,893,388 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	67,087,077 - 67,095,792 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	66,888,158 - 66,896,871 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	70,458,528 - 70,469,212 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	70,459,532 - 70,467,915 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	70,636,174 - 70,646,856 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	67,127,673 - 67,135,594 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	60,137,647 - 60,145,574 (-)	NCBI		Celera
Cytogenetic Map	7	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (EXP)

17beta-estradiol 3-benzoate (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP,ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

benzo[b]fluoranthene (ISO)

Benzo[ghi]perylene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

buta-1,3-diene (ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

chrysene (ISO)

copper atom (EXP)

copper(0) (EXP)

decabromodiphenyl ether (EXP)

diarsenic trioxide (ISO)

diiodine (ISO)

methamphetamine (ISO)

ozone (ISO)

perfluorooctane-1-sulfonic acid (ISO)

sodium arsenite (ISO)

tamoxifen (ISO)

testosterone (EXP)

tetraphene (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

trimellitic anhydride (ISO)

tris(2-butoxyethyl) phosphate (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

bicarbonate transport (IEA)

chloride transmembrane transport (IBA)

oxalate transport (IEA)

sulfate transmembrane transport (IBA)

transmembrane transport (IEA)

Cellular Component

membrane (IEA)

plasma membrane (IBA)

Molecular Function

bicarbonate transmembrane transporter activity (IBA)

chloride transmembrane transporter activity (IBA)

oxalate transmembrane transporter activity (IBA)

sulfate transmembrane transporter activity (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Slc26a10
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	64,880,694 - 64,890,340 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	64,880,699 - 64,889,409 (-)	Ensembl				GRCr8
mRatBN7.2	7	62,995,165 - 63,005,099 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	62,995,381 - 63,004,087 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	64,884,673 - 64,893,388 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	67,087,077 - 67,095,792 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	66,888,158 - 66,896,871 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	70,458,528 - 70,469,212 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	70,459,532 - 70,467,915 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	70,636,174 - 70,646,856 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	67,127,673 - 67,135,594 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	60,137,647 - 60,145,574 (-)	NCBI		Celera
Cytogenetic Map	7	q22	NCBI

SLC26A10P
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	57,619,527 - 57,626,151 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	57,619,527 - 57,626,036 (+)	Ensembl			hg38	GRCh38
GRCh37	12	58,013,310 - 58,019,934 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	56,299,960 - 56,306,201 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	12	56,301,312 - 56,306,200	NCBI
Celera	12	57,669,508 - 57,675,749 (+)	NCBI		Celera
Cytogenetic Map	12	q13.3	NCBI
HuRef	12	55,051,378 - 55,057,619 (+)	NCBI		HuRef
CHM1_1	12	57,981,509 - 57,987,750 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	57,587,746 - 57,594,370 (+)	NCBI		T2T-CHM13v2.0

Slc26a10
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	127,007,262 - 127,016,690 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	127,007,262 - 127,016,514 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	10	127,171,393 - 127,180,705 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	127,171,393 - 127,180,645 (-)	Ensembl			mm10	GRCm38
MGSCv37	10	126,609,482 - 126,617,701 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	10	126,574,342 - 126,583,531 (-)	NCBI		MGSCv36	mm8
Celera	10	129,565,459 - 129,573,676 (-)	NCBI		Celera
Cytogenetic Map	10	D3	NCBI
cM Map	10	74.5	NCBI

Slc26a10p
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955458	5,343,332 - 5,351,750 (+)	Ensembl
ChiLan1.0	NW_004955458	5,343,188 - 5,352,194 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC26A10P
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	36,715,165 - 36,721,012 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	36,711,936 - 36,719,965 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	31,300,977 - 31,306,794 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	31,560,631 - 31,566,215 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	31,560,657 - 31,566,179 (-)	Ensembl			panPan2	panpan1.1

SLC26A10
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	1,696,699 - 1,703,571 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	1,696,112 - 1,703,166 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	1,759,895 - 1,766,759 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	1,706,075 - 1,712,938 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	1,706,048 - 1,712,526 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	1,683,851 - 1,690,715 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	1,925,568 - 1,932,426 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	2,050,837 - 2,057,701 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

LOC101959649
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	57,099,902 - 57,107,123 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936646	1,762,622 - 1,770,325 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC26A10
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	22,882,669 - 22,890,906 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	5	22,881,630 - 22,889,552 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	24,718,107 - 24,725,008 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LOC103238577
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	53,526,567 - 53,534,193 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	53,528,388 - 53,533,882 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666037	192,427,446 - 192,434,589 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc26a10p
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624802	10,337,288 - 10,344,821 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Slc26a10
32 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	376
Count of miRNA genes:	198
Interacting mature miRNAs:	240
Transcripts:	ENSRNOT00000052288
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
7411569	Bw137	Body weight QTL 137		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	7	23807606	68807606	Rat
10053722	Scort27	Serum corticosterone level QTL 27	2.41	0.0083	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	7	45113903	90113903	Rat
1549840	Bss5	Bone structure and strength QTL 5	9.8		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	7	26638057	71638057	Rat
1300127	Srn1	Serum renin concentration QTL 1	3.87		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	7	24179478	86817926	Rat
10059605	Kidm47	Kidney mass QTL 47	2.91	0.05	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	7	49137999	67614020	Rat
1357336	Gluco6	Glucose level QTL 6	3.4		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	7	51700643	96700643	Rat
1358361	Sradr5	Stress Responsive Adrenal Weight QTL 5	5.55		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	7	31770293	110435881	Rat
1298525	Cm1	Cardiac mass QTL 1	2.7		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	7	56625161	101625161	Rat
631513	Scl7	Serum cholesterol level QTL 7	4.1		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	7	39845902	84845902	Rat
10755453	Coatc12	Coat color QTL 12		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	32998702	77998702	Rat
631504	Cm27	Cardiac mass QTL 27	3.45		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	7	46307490	127866166	Rat
7411605	Foco14	Food consumption QTL 14	24.1	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	36178764	81178764	Rat
1300151	Bp181	Blood pressure QTL 181	3.36		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	7	55498584	105834451	Rat
1559283	Emca4	Estrogen-induced mammary cancer QTL 4	3.7		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	7	63889858	108889858	Rat
1643004	Pain2	Pain QTL 2	1		mechanical nociception trait (VT:0002734)	self mutilation severity score (CMO:0002145)	7	10112916	99900612	Rat
738030	Anxrr8	Anxiety related response QTL 8	4.1		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	48475049	93475049	Rat
1300149	Cm6	Cardiac mass QTL 6	4.09		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	7	1	104117804	Rat
631534	Lnnr1	Liver neoplastic nodule remodeling QTL 1	3.85	0.001	liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)	7	36178764	81178764	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	1509236	116977875	Rat
61357	Bp38	Blood pressure QTL 38	1.6	0.052	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	40540077	123682549	Rat
70190	Mcs6	Mammary carcinoma susceptibility QTL 6	2.29		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	7	28624575	65788017	Rat
2316947	Rf58	Renal function QTL 58	7.8		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	7	49682832	115766396	Rat
1298528	Bp169	Blood pressure QTL 169		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	62963207	107963207	Rat
1300132	Bp182	Blood pressure QTL 182	3.49		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	21541977	86817926	Rat
1576303	Ept7	Estrogen-induced pituitary tumorigenesis QTL 7	3.7		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	7	63889858	108889858	Rat
2316955	Stl24	Serum triglyceride level QTL 24	7.1		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	7	49682832	115766396	Rat
2316952	Pur22	Proteinuria QTL 22	5.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	7	49682832	115766396	Rat
2303582	Gluco53	Glucose level QTL 53	3		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	7	48603087	93603087	Rat
70207	Niddm31	Non-insulin dependent diabetes mellitus QTL 31	3.9		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	7	20057232	65057232	Rat
61439	Cia8	Collagen induced arthritis QTL 8	5.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	7	27182914	72182914	Rat

Markers in Region

RH126364

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	63,002,451 - 63,002,654 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	70,465,818 - 70,466,020	NCBI	Rnor6.0
Rnor_5.0	7	70,643,459 - 70,643,661	UniSTS	Rnor5.0
RGSC_v3.4	7	67,133,959 - 67,134,161	UniSTS	RGSC3.4
Celera	7	60,143,939 - 60,144,141	UniSTS
Cytogenetic Map	7	q22	UniSTS

RH142023

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	7	64,881,624 - 64,882,248 (+)	Marker Load Pipeline
mRatBN7.2	7	62,996,302 - 62,996,926 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	70,459,669 - 70,460,292	NCBI	Rnor6.0
Rnor_5.0	7	70,637,310 - 70,637,933	UniSTS	Rnor5.0
RGSC_v3.4	7	67,127,810 - 67,128,433	UniSTS	RGSC3.4
Celera	7	60,137,784 - 60,138,407	UniSTS
Cytogenetic Map	7	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
11	12	67	154	91	90	59	89	59	6	348	189	11	133	81	92	31	15	15

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001134595	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079687	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264052	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264053	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC114111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ211772	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000052288 ⟹ ENSRNOP00000049501

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	64,880,699 - 64,889,409 (-)	Ensembl
mRatBN7.2 Ensembl	7	62,996,166 - 63,004,087 (-)	Ensembl
Rnor_6.0 Ensembl	7	70,459,532 - 70,467,453 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000088995 ⟹ ENSRNOP00000070303

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	7	70,460,539 - 70,467,915 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000113632 ⟹ ENSRNOP00000091854

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	64,880,699 - 64,889,409 (-)	Ensembl
mRatBN7.2 Ensembl	7	62,995,381 - 62,998,051 (-)	Ensembl

RefSeq Acc Id:

NM_001134595 ⟹ NP_001128067

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	64,880,694 - 64,889,409 (-)	NCBI
mRatBN7.2	7	62,995,372 - 63,004,087 (-)	NCBI
Rnor_6.0	7	70,459,532 - 70,467,453 (-)	NCBI
Rnor_5.0	7	70,636,174 - 70,646,856 (-)	NCBI
RGSC_v3.4	7	67,127,673 - 67,135,594 (-)	RGD
Celera	7	60,137,647 - 60,145,574 (-)	RGD

Sequence:

show sequence

GAGGCGGGCTCAGGGCTGATGAGGCAGAGAGGGTATTTAAGACCAGGAGATGCTGCAGGGGGCC
AAGGACAAAATGAGTGGGCCACTTGCCTCTGGGACATGCTCAGATCTGGAAGAGGCTTCCGACC
TTAAGGCTCCCCTGAGCTCAAGGTTCAGGGAACCTCTCACCCACGCTCGGTTCCAGGAGCTCTT
CGGGGGCGCAGAGCAGGAGCCGGAGCTACCAGCCGAGCCCTGCTTACCCTGGCTGTGCAGGCTG
CGGAGGAGGAGAGCCAGCGCCTGTTCTGGGCCGGGGGCGTGGCGCGTGCTGCTGGCACGGCTGC
CCCCGCTGCGTTGGCTGCCCCAATACCGCTGGCGAGCCTGGCTGCTCGGAGATGCTGTGGCTGG
CATAACAGTGGGCGTTGTGCACGTGCCCCAGGGCATGGCTTTTGCCCTCCTGACCTCGGTGCCC
CCCGTGTTCGGACTCTACACTTCTTTCTTTCCGGTCCTCATCTACAGTTTGCTGGGCACTGGGA
GACACTTGTCCACTGGAACGTTCGCAGTACTCAGTCTAATGACCGGCTCTGTTGTCGAGAGGGT
GGTGCCTGAACCCCTCGCGGGGAACCTCAGTGGAATCGAAAGGGAGAAATTGGAAGCTCAGAGA
ATTGGGGCGGCAGCCGCTGTGGCCTTCGGGAGTGGGGCACTGATGCTGGGGATGTTCGTGCTGC
AGCTTGGTGTCCTGTCCACCTTTTTATCCGAGCCTGTGGTCAAGGCGCTGACTAGCGGGGCCGC
GCTGCACGTGCTGGTGTCCCAGCTGCCAAGCCTCTTGGGATTGTCTCTCCCACGCCAGATCGGC
TGCTTTTCTCTCTTCAAGACGCTGGCTGCGGTCCTCAGCGCACTGAACCAGAGCAGTCCTGCAG
AACTGACCATCTCGGCGCTCAGCCTGGCGTTGCTAGTGCCGGTCAAGGAACTAAACGTGCGATT
CCGGGACAGGCTACCCACTCCGATCCCAGGAGAAGTTGTCATGGTGCTTCTGGCAACCGTGCTG
TGCTTCACCTCCTCCCTGGACAGCAGATACAATGTCCAGGTAGTGGGACTATTGCCTGGAGGAT
TTCCCCAGCCTCTCCTCCCCACCCTGGATGATCTGCCCAGGATACTGGCTGACTCACTGCCCAT
CTCATTGGTTACTTTTGCTGTGTCCACCTCTCTGGCCTCCATCTATGCAGACAAGTACAGCTAC
ACTATTGACCCCAACCAGGAGCTCCTGGCCCACGGTGTCTCCAACCTCATTTCCTCTCTCTTCT
CTTGCTTTCCCAACTCGGCCACACTGGCTACAACCAGCTTATTAGTGGATGCTGGTGGGAATAC
ACAGCTGTCAGGCCTCTTCTCCTGCACAGTGGTTCTGTCAGTGCTGCTATGGCTCGGGCCCTTC
TTCTACTATTTGCCCAAGGCTGTTCTCGCTTGCATCAACATCTCCAGCATGCGCCAGATGTTCT
TCCAGATGCAAGAACTTCCACAGCTGTGGCACGTCAGCCGCGTGGACTTTGCCGTGTGGATGGT
CACATGGGTGGCTGTCGTGACTCTGAACGTGGACCTGGGCCTGGCTGTGGGTGTGGTTGTCTCT
ATGGTGACAGTGGTCTGCCGGACTCAGAGGGTGAAGTGCCTGGCGCTTGGATTGGCTGAGGGGA
CAGAGCTCTACAGGCCAATCAGAGAGAGCCATAAGCTCCTCCAGGTTCCAGGCCTGTGTATCCT
GAGCTATCCAGCGCCCCTCTACTTTGCAACTCGTGGACAGTTCCACCGCGTCTTGGAGTGGCAT
CTGGGGCTTGGAGAAAGAACCAAGCCAGGTGCTGAGCCTATCAGAGTGGTGATCCTAGACTTCA
GTGGTGTCACTTTTGCAGATGCTGCAGGGGCCAGGGAAGTGGTCCAGCTTACCAGGCGGTGCCA
GGACGATGGGATCTGCCTTCTCTTGGCTCAGTGTAATGACTTGGTGCTCAAGACCTTGACCCGG
GCGGGACTCCTGGATAGCATGACTCCAGAACAACTCTTTGTGAGCGTCCAGGATGCAGCTGCGC
ATGCGCTGGAGAGGCTGAAACCTACTGGCCCGAAGATTTGTACAGTGTGGGTCTGACCAGTTAC
TTAAGAGTGTGAGAGGCCCCAACAGTATGTGTGTGAGGAAGGCCAGGATCCTTGAGCTCCCCGG
TAGTTGCAACCAATAACATGAAGCTGAGAACATCCAAGGCCCATGAAGTGGGTCCAGGAATCTG
CATGTGGGGCTCTCCAATCCCCCCAAGCCCCGCCATACCCAAAGTACCAGAGACACAAGTAAAA
ATGGCTTCCACCGTGTGTTCACCAGC

hide sequence

RefSeq Acc Id:

XM_039079687 ⟹ XP_038935615

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	64,883,756 - 64,890,117 (-)	NCBI
mRatBN7.2	7	62,998,633 - 63,005,092 (-)	NCBI

RefSeq Acc Id:

XM_063264050 ⟹ XP_063120120

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	64,881,488 - 64,890,119 (-)	NCBI

RefSeq Acc Id:

XM_063264051 ⟹ XP_063120121

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	64,881,488 - 64,890,119 (-)	NCBI

RefSeq Acc Id:

XM_063264052 ⟹ XP_063120122

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	64,881,488 - 64,890,340 (-)	NCBI

RefSeq Acc Id:

XM_063264053 ⟹ XP_063120123

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	64,881,488 - 64,890,119 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001128067	(Get FASTA)	NCBI Sequence Viewer
	XP_038935615	(Get FASTA)	NCBI Sequence Viewer
	XP_063120120	(Get FASTA)	NCBI Sequence Viewer
	XP_063120121	(Get FASTA)	NCBI Sequence Viewer
	XP_063120122	(Get FASTA)	NCBI Sequence Viewer
	XP_063120123	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM16491	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000049501
	ENSRNOP00000049501.5
	ENSRNOP00000091854.2

RefSeq Acc Id:

NP_001128067 ⟸ NM_001134595

- UniProtKB:

D3ZXL0 (UniProtKB/TrEMBL), A6HQT1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLQGAKDKMSGPLASGTCSDLEEASDLKAPLSSRFREPLTHARFQELFGGAEQEPELPAEPCLP
WLCRLRRRRASACSGPGAWRVLLARLPPLRWLPQYRWRAWLLGDAVAGITVGVVHVPQGMAFAL
LTSVPPVFGLYTSFFPVLIYSLLGTGRHLSTGTFAVLSLMTGSVVERVVPEPLAGNLSGIEREK
LEAQRIGAAAAVAFGSGALMLGMFVLQLGVLSTFLSEPVVKALTSGAALHVLVSQLPSLLGLSL
PRQIGCFSLFKTLAAVLSALNQSSPAELTISALSLALLVPVKELNVRFRDRLPTPIPGEVVMVL
LATVLCFTSSLDSRYNVQVVGLLPGGFPQPLLPTLDDLPRILADSLPISLVTFAVSTSLASIYA
DKYSYTIDPNQELLAHGVSNLISSLFSCFPNSATLATTSLLVDAGGNTQLSGLFSCTVVLSVLL
WLGPFFYYLPKAVLACINISSMRQMFFQMQELPQLWHVSRVDFAVWMVTWVAVVTLNVDLGLAV
GVVVSMVTVVCRTQRVKCLALGLAEGTELYRPIRESHKLLQVPGLCILSYPAPLYFATRGQFHR
VLEWHLGLGERTKPGAEPIRVVILDFSGVTFADAAGAREVVQLTRRCQDDGICLLLAQCNDLVL
KTLTRAGLLDSMTPEQLFVSVQDAAAHALERLKPTGPKICTVWV

hide sequence

Ensembl Acc Id:

ENSRNOP00000070303 ⟸ ENSRNOT00000088995

Ensembl Acc Id:

ENSRNOP00000049501 ⟸ ENSRNOT00000052288

RefSeq Acc Id:	XP_038935615 ⟸ XM_039079687
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSRNOP00000091854 ⟸ ENSRNOT00000113632

RefSeq Acc Id:	XP_063120122 ⟸ XM_063264052
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063120123 ⟸ XM_063264053
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063120121 ⟸ XM_063264051
- Peptide Label:	isoform X1
- UniProtKB:	A6HQT1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063120120 ⟸ XM_063264050
- Peptide Label:	isoform X1
- UniProtKB:	A6HQT1 (UniProtKB/TrEMBL)

Protein Domains

STAS

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZXL0-F1-model_v2	AlphaFold	D3ZXL0	1-684	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1564851	AgrOrtholog
BioCyc Gene	G2FUF-33761	BioCyc
Ensembl Genes	ENSRNOG00000029465	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000052288	ENTREZGENE
	ENSRNOT00000052288.7	UniProtKB/TrEMBL
	ENSRNOT00000113632.2	UniProtKB/TrEMBL
Gene3D-CATH	3.30.750.24	UniProtKB/TrEMBL
InterPro	SO4_transptr/STAS	UniProtKB/TrEMBL
	STAS_dom_sf	UniProtKB/TrEMBL
	SulP_transpt	UniProtKB/TrEMBL
	Sulph_transpt	UniProtKB/TrEMBL
KEGG Report	rno:366909	UniProtKB/TrEMBL
NCBI Gene	366909	ENTREZGENE
PANTHER	PTHR11814	UniProtKB/TrEMBL
Pfam	STAS	UniProtKB/TrEMBL
	Sulfate_transp	UniProtKB/TrEMBL
PhenoGen	Slc26a10	PhenoGen
PROSITE	STAS	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000029465	RatGTEx
Superfamily-SCOP	STAS	UniProtKB/TrEMBL
UniProt	A0A8I6GJX7_RAT	UniProtKB/TrEMBL
	A6HQT1	ENTREZGENE, UniProtKB/TrEMBL
	D3ZXL0	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2010-05-05	Slc26a10	solute carrier family 26, member 10	RGD1564851	similar to putative anion transporter	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1564851	similar to putative anion transporter	RGD1564851_predicted	similar to putative anion transporter (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1564851_predicted	similar to putative anion transporter (predicted)	LOC366909	similar to putative anion transporter	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC366909	similar to putative anion transporter			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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