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Gene: Cnst (consortin, connexin sorting protein) Rattus norvegicus

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Symbol:

Cnst

Name:

consortin, connexin sorting protein

RGD ID:

1564833

Description:

Predicted to enable connexin binding activity and phosphatase binding activity. Predicted to be involved in positive regulation of Golgi to plasma membrane protein transport. Predicted to be located in membrane. Predicted to be part of protein-containing complex. Predicted to be active in plasma membrane; trans-Golgi network; and transport vesicle. Orthologous to human CNST (consortin, connexin sorting protein); INTERACTS WITH 6-propyl-2-thiouracil; acrylamide; amitrole.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

consortin; consortin-like; LOC100912475; LOC498297; RGD1564833; similar to 9630058J23Rik protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	93,828,694 - 93,905,497 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	93,828,687 - 93,905,490 (+)	Ensembl				GRCr8
mRatBN7.2	13	91,296,740 - 91,373,531 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	91,296,142 - 91,373,531 (+)	Ensembl				mRatBN7.2
Rnor_6.0	13	97,838,325 - 97,915,131 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	97,838,361 - 97,913,082 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	102,848,124 - 102,925,145 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	95,246,290 - 95,323,173 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	90,847,901 - 90,924,738 (+)	NCBI		Celera
Cytogenetic Map	13	q26	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

thyroid gland disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2-bromohexadecanoic acid (ISO)

2-hydroxypropanoic acid (ISO)

3-methylcholanthrene (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

amitrole (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

avobenzone (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

butanal (ISO)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

copper(II) sulfate (ISO)

DDE (ISO)

decabromodiphenyl ether (EXP)

dibutyl phthalate (EXP)

dicrotophos (ISO)

dimethoate (ISO)

dorsomorphin (ISO)

enzacamene (ISO)

enzyme inhibitor (ISO)

ethanol (ISO)

fenvalerate (EXP,ISO)

flutamide (EXP)

folic acid (ISO)

gentamycin (EXP)

Iopanoic acid (ISO)

lead(0) (ISO)

methimazole (EXP,ISO)

methotrexate (ISO)

methoxychlor (ISO)

nitrates (ISO)

paracetamol (EXP)

phenylmercury acetate (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

Soman (EXP)

sulfadimethoxine (EXP)

temozolomide (ISO)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

torcetrapib (ISO)

trichloroethene (EXP)

triphenyl phosphate (ISO)

tungsten (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of Golgi to plasma membrane protein transport (IBA,IEA,ISO)

Cellular Component

plasma membrane (IBA,IEA,ISO)

protein-containing complex (IEA,ISO)

trans-Golgi network (IBA,IEA,ISO)

transport vesicle (IBA,IEA,ISO)

Molecular Function

connexin binding (IBA,IEA,ISO)

phosphatase binding (IEA,ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:19389623	PMID:19864490	PMID:19946888

Genomics

Comparative Map Data

Cnst
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	93,828,694 - 93,905,497 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	93,828,687 - 93,905,490 (+)	Ensembl				GRCr8
mRatBN7.2	13	91,296,740 - 91,373,531 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	91,296,142 - 91,373,531 (+)	Ensembl				mRatBN7.2
Rnor_6.0	13	97,838,325 - 97,915,131 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	97,838,361 - 97,913,082 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	102,848,124 - 102,925,145 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	95,246,290 - 95,323,173 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	90,847,901 - 90,924,738 (+)	NCBI		Celera
Cytogenetic Map	13	q26	NCBI

CNST
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	246,566,456 - 246,668,595 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	246,566,338 - 246,668,595 (+)	Ensembl			hg38	GRCh38
GRCh37	1	246,729,758 - 246,831,897 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	244,796,429 - 244,897,049 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	1	220,016,987 - 220,121,650 (+)	NCBI		Celera
Cytogenetic Map	1	q44	NCBI
HuRef	1	217,115,430 - 217,192,622 (+)	NCBI		HuRef
HuRef	1	217,197,253 - 217,218,839 (+)	NCBI		HuRef
CHM1_1	1	248,001,936 - 248,104,308 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	245,987,346 - 246,091,605 (+)	NCBI		T2T-CHM13v2.0

Cnst
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	179,374,009 - 179,455,043 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	179,373,935 - 179,455,043 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	179,546,444 - 179,627,478 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	179,546,370 - 179,627,478 (+)	Ensembl			mm10	GRCm38
MGSCv37	1	181,476,660 - 181,557,604 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	181,383,204 - 181,464,148 (+)	NCBI		MGSCv36	mm8
Celera	1	186,617,507 - 186,698,192 (+)	NCBI		Celera
Cytogenetic Map	1	H4	NCBI
cM Map	1	83.57	NCBI

Cnst
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	9,473,398 - 9,529,996 (+)	Ensembl
ChiLan1.0	NW_004955406	9,441,441 - 9,531,792 (+)	NCBI	ChiLan1.0	ChiLan1.0

CNST
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	2,457,842 - 2,565,803 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	2,675,362 - 2,782,529 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	222,184,419 - 222,291,611 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	227,538,079 - 227,761,748 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	227,563,246 - 227,759,310 (+)	Ensembl			panPan2	panpan1.1

CNST
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	37,278,479 - 37,400,847 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	37,328,609 - 37,399,390 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	36,760,942 - 36,883,324 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	37,110,754 - 37,233,436 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	37,110,562 - 37,233,434 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	36,950,992 - 37,073,299 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	36,958,988 - 37,081,302 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	37,227,926 - 37,350,341 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Cnst
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	50,250,159 - 50,347,933 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936526	4,397,357 - 4,497,850 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936526	4,399,886 - 4,497,185 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CNST
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	19,046,429 - 19,139,655 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	10	19,046,384 - 19,139,662 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	21,753,164 - 21,762,574 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CNST
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	83,592,133 - 83,706,703 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	83,595,348 - 83,706,697 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666055	85,869,816 - 85,986,093 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cnst
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624771	13,021,322 - 13,082,776 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624771	13,012,415 - 13,115,092 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Cnst
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	10	57,885,954 - 57,968,042 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Cnst
888 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	84
Count of miRNA genes:	68
Interacting mature miRNAs:	70
Transcripts:	ENSRNOT00000003641
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
7207885	Glom27	Glomerulus QTL 27	3.9		kidney glomerulus integrity trait (VT:0010546)	kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)	13	21120177	109350286	Rat
738027	Lnnr6	Liver neoplastic nodule remodeling QTL 6	3.3		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	13	65613454	109350286	Rat
7387280	Uae43	Urinary albumin excretion QTL 43	5.69	0.4174	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	68983334	109350286	Rat
2293702	Bss34	Bone structure and strength QTL 34	4.61	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	13	67635937	109350286	Rat
1576318	Schws5	Schwannoma susceptibility QTL 5		0.0351	nervous system integrity trait (VT:0010566)	post-insult time to trigeminal nerve neurilemmoma formation (CMO:0002019)	13	64497900	109350286	Rat
1354621	Rf47	Renal function QTL 47	3.7		kidney renin amount (VT:0010559)	kidney renin level (CMO:0002166)	13	11081740	103588154	Rat
1354655	Bp241	Blood pressure QTL 241	3.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	38975045	103588154	Rat
8655951	Rf63	Renal function QTL 63	12.2		blood urea nitrogen amount (VT:0005265)	plasma urea nitrogen level (CMO:0000586)	13	71610804	109350286	Rat
4889606	Gluco63	Glucose level QTL 63	2.86	0.003	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	13	83286150	109350286	Rat
8655959	Pur32	Proteinuria QTL 32	8.4		urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	13	72984506	99745408	Rat
2293687	Bss26	Bone structure and strength QTL 26	4.6	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	13	67635937	109350286	Rat
12879475	Bp400	Blood pressure QTL 400			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	64375743	109350286	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	1	103588154	Rat
724564	Uae11	Urinary albumin excretion QTL 11	5.7		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	13	47354258	94285672	Rat
2293341	Glom15	Glomerulus QTL 15	9.1		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	13	67635937	109350286	Rat

Markers in Region

RH144271

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	13	93,904,450 - 93,904,629 (+)	Marker Load Pipeline
mRatBN7.2	13	91,372,484 - 91,372,663 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	97,914,085 - 97,914,263	NCBI	Rnor6.0
Rnor_5.0	13	102,924,099 - 102,924,277	UniSTS	Rnor5.0
RGSC_v3.4	13	95,322,126 - 95,322,304	UniSTS	RGSC3.4
Celera	13	90,923,692 - 90,923,870	UniSTS
RH 3.4 Map	13	607.2	UniSTS
Cytogenetic Map	13	q26	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
18	12	71	196	91	90	59	136	59	6	434	240	11	183	109	93	31	31	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001430792	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001430793	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001060344	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006221591	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006221594	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250411	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250414	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039091465	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_573525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC115369	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ231508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000003641 ⟹ ENSRNOP00000003641

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	93,828,828 - 93,905,490 (+)	Ensembl
mRatBN7.2 Ensembl	13	91,297,417 - 91,373,531 (+)	Ensembl
Rnor_6.0 Ensembl	13	97,838,361 - 97,913,082 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119104 ⟹ ENSRNOP00000078188

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	93,828,687 - 93,905,490 (+)	Ensembl
mRatBN7.2 Ensembl	13	91,296,142 - 91,373,531 (+)	Ensembl

RefSeq Acc Id:

XM_006250411 ⟹ XP_006250473

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	93,829,105 - 93,905,497 (+)	NCBI
mRatBN7.2	13	91,297,130 - 91,373,531 (+)	NCBI
Rnor_6.0	13	97,838,651 - 97,915,131 (+)	NCBI
Rnor_5.0	13	102,848,124 - 102,925,145 (+)	NCBI

Sequence:

show sequence

GACCTGCCGGCTGACGACCGCCGCCGAGCTGGGGAGAGTCGTTGGCTCCTCCCCGGGCGCTGTC
CTCCCGGGAGTTGCAGCGGGTCCCCTCGCATCCGCCCCCTCTCGGCTCTCCTGTTTTCCCCGCT
TTTCTGCGGGTACGCGGTTGTCGCGCGTCGCGCCAATTTCTCCGCGCGCGCTCCCCTCCCCGGA
GACCCTGCGGCTTCTACTCCGCGTCGGTGTCTCTGTTCGGTGGCCCGTCGTCTGTGCTGGCTTC
CTTAAGGATGGCTTTTATTTGCTCTCATACCTTCTTTCCCCTCCACAGCTACCTCTTTGGTTGT
CAGAAACCGCCTAGTGCTTCCCTTCTTTCCTCCCTCTGGGCCAAGATTTACCTTTTCTTTTTTA
GTATGCATGTTTGCAAGACTGAAATTTAAGGCTGAAAAAAATTAATATCTGAAAGCTTAAAATT
CCTTCCTATGTTTAAAAGGATTAAGGTCTTAGGAAGCTTCTTTATTCTCTGTGTAAACTTAGTT
AAGCACATTGTACTGTAGAATGCAATTTAAAAGGCCGATTGCAGAGACTAAAAATAGGTTGCCC
TAATGGGAATTTTGGCAGTCTTTGGGGCAGTATTGGAAGATCCTTTTCTTTGAGAGTGATTTCG
GTGTTTGGGGATCGTACTCAAAGCTTTGCCCACTATCCTTCCATCAAGGCAGGAAGCCGCGGCC
AATCAACTTCTTAGTTTAAAATACGTACAATCCTTTCTGCTTACTCTGCTGGCAGCATAATTGA
GCTTGGCATTTAAATGCACAAGGAAAGAGTTTCTGAGGAATGTGTCACCTGCCAAGTAGCCTGA
AGCTTATCCTTAGCTGATGAAACTCTAGGGCATAAAGAATTGACACCTGAAGATGGCCTTTTTT
GCATGGCATGGAAGGACTTTGACAAGACGCTAAACAGTTCAACAAAAGATGCGCTAATGGATGA
CAGCGACTCTCCTACATACAGTCTGCAGATAGAGCCACAAGATGGATGTCATCCGGGGGACAGC
GTGGAAAGGAGAGTGACACGCTTGCCTTCTGTCTCAGATGAAAATGAAAATCAGCTTGCCGGAG
ACGGGCCTGCACTTCTGACCACCAGTGACGGTGCCATGGGAAGAGCTGCAGTGTCTGAGCAGGA
CAGTCTCAACAATAACGAAAGCTGCCTGTCCAGCTGTGAGGCAGCCCCCAGGGACAACTCAGAA
GGTCCCAAAGATGACCCGCCTTCCTTGGGTGAGGACACAAAGCCACCTGGAAAAAGAAGTCCAA
GGGCCAAAAGAGGCGCCCCTAAGAGCTCAGCACCTCCAGGTGATGGTGTTACACAGATGCCGAA
TGCAGCCTCACAGGCTGCCGGTGAGGAGGAGGCTGCCGGAGTGAACGCAAATGACCCACCCAAA
GCAGCAGCACTGCAGCCACTCTTCTCGCTGATCCGAGGAGAGGTGGAGCAGATGGACTCTAGGG
CGCTTCCCCTCTTCCTCCACCAGGTAGCGGAGACCTATTTCCAGGAAGAGGACTATGAGAAAGC
AATGAAATTCATTCAGCTTGAACGACTGTATCATGAGCAATTGCTTGCCAATCTTTCTGCCATT
CAGGAACAGTGGGAAACAAAATGGAAATCTGTCCAGCCAAGCACCAAGAAGCCTCTGAGGAATT
CAGAAAAGGGATTTAATGGTGAAGATTTTGAACAGCTTGCTAAAATTTGCACAACTCATCAAGA
CCCTCTCTTGTCCAAGCTTAAGATAGTACCTGTGGAGCAGTCACCAGGGAAGAAAGGCTTTCCG
AGGGTGACAATGTCTGACGAGCCGATGGAGAGAGGAGCAACAGCCAAAGAGCCAGAGATTGAAA
CCTGCCCCGGCACGGGTCCAAGTGGAGGCCGGCATGAGGAGGAGCCCCAGGAGAGCAGCCCTGA
CTGTCCTCAGATGAACTGGCAGACAGCTTCCCCCGACCTTCCAGGAACTGCAGGGAAGGCGCAC
ACGGAGGCGGAGGCGCTGCCCAATACCACACTGGAGCTCCACACCCAGTCCCCAGAGGCAGCTG
GGAGCAGGTCAGGGGCAGCTGCTGCGGAGAATGCCTGTGAGGATGACAGCTGTGTGCAGGCGCC
TCCCACAGAGGACCACCCTGATGTGGCCAGAGCCCCTAAGGAGGTTCCTCCTAGTGAGCCAGTG
GCAGAGCCGTTCCCAAGCGGTGACATTGCACCGCCTGGGTTGATTTCAGGGGGTAAATATTCAC
AGACACACCGAAAAGAACTCTGCCTTCCACTCCAGGACACATTTGAAGCGCTGCCCAGGGACCA
GCATTGCAACAGTGAGGTAGCCAAGCCACGGCAGCCTGATGTCACTGCCAGTGATGGGAAATCA
GCACAGAGTCAGACTGGCTTGGAGACTGGTCCTGAGAGCGCACTTTGTGGTGACAGGAAAGCCT
CTGACGTAAGCACCCTGTGCCCAGAAGTATGTATGGCCCCAGAAGAAAGGGGGGATAGGGAAGA
GCAAGTAAGCAAGGAAACGGAAGACTATTTGAACAGCCTTCTGGAAGGATGCTTAAAGGATGTG
GAAGACTCCCTGTCCTATGAGAGCATCCAGGACGACGACGACTCCGACCTCCTCCAAGACCTCT
CTCCTGAAGAAGCCTCCTACAGTCTCCAGGAGAATCTGCCTCCTGAGGAGAGCGCGCTCTCCCT
GGATGATCTGGCCAAGAAGATAGAGATCGCAGAGGCCATTCCTGCAGAAGGGCTGGTGTCCATA
CTGAAGAAGAGGAATGATGCAGTAGGCGGCCATCCTGCCCAAATGCAGCAGAAGCCGTCCAAGC
GCAGAGTGCGGTTCCAGGAAATAGACGATAACCTGGACCAAGATGAAGTCGGCGGTGGCTCCTG
TGTCCTGCTCATCTTGCTGTGCATAGCCACCGTTTTCCTCAGCGTTGGAGGGACGGCGCTCTAC
TGCACTCTGGGTGACATGGAGTCACCTGTTTGTACGGACTTTGCTGACAACGTGGACTTCTATT
ACACTAAGCTGCTGCAGGGGGTGGCAGGGCTTAAACACTGGGTCTACCTCTCCTAGCAGCAAGG
GTGACAGGCGTGACAGGAATGCTGACAGACAAAGAAGATGCAAACTTCCCCGACAGCTTTTATT
TCAGAAGTCATGTATTCCCCCTCCCTGGCTTCAAGGACCCAAGGACGGACGTTAGAAACAGCAA
CATCGAAGAACAGCAGCCCAGAGAGCACGTTAGAATAATCCCCAGCAGAAGGCAGTGCTGACAC
AGGCCCTGAGGACAGAGGGAGGGAGCCTTGGCGAGCATGCCCAAGTCTTTGCCTTCCTAGTGTC
CTGTGGGGCTTACACTGAGGGCTAAAGGACACTCCTGGTTTACAGTCGTGCTCCGAGGGCATTG
CCTCCCGCCATCATGCAATAAGTTCCTTTGTCATCAGAGAGAGTCACCTTATGGCTTCAGTGCC
ATTTTTTAGTTAATCTTGGGAGCTGTGTAACTTAAGCCTTGGGCATTACTCTAGATTCTGGTCT
TCATTTGTGAAATGGTTGTGTGGGTGTGTGGAGGTCTAAAGCAGTGATCTCAAGTGGATAGCTG
GCATAGGATACAAAGATTACCTTTATTCTTTTAACTTGACGACAATGTGCAGGCACAAATCTTT
GGAAAAGGCTTACCTGTGAACTAGATAAACTGTAGAAACTTTGGCCCTGAACTGAGGAACTAAC
AGAACTGTGGCAATGAACTTGACAGGCCTGAAGGCACAGTGACAGAAATCCCAGTTCCCAGGTG
AGATTTCACCCTGGCTTCTAAGCTGCCTCAAGTGTTGATTGCTCAGAGAAACTCACTGAACATC
TGTTGTGTTTCTGAGAACCTCAGGATAGGAGCCCAGAAAGGCACAGTTCCTTGTGCAGGTGTCT
ATGGAAGGTGGACCCATACTTTGATGACTCAAACAGGCTACCACATGTATGAGTAATCTCAGGC
TATACACTTAGGTGTGCAGAATGTGGGTGTCTATCATGGGCTCATTTTAGACTGCCTCATGAGG
GCCTCACACCGTAAAGAGACAAAGGTCTAGCCGTGTTTAATTCCGTCATTAGATGGCCTTCCCT
CATTTGTGGTACAGTGATCTCTCGCTTAGGAAACTTTGACTTTTTATATTCTAGGTAACATCTG
TTTTTAAAAATCATGAATTATAGTTTTTTAGCAAGTGATCATTATGTTCTGTTTTCCCATTAGG
ATCATTTGGAAGGAAGAGAGAGAAATTGCTTTGTAGATGTTACTGGCTGGCACAGTACCTTCCT
TTGCGTTTCTGCCTATTTATTTGGAGCGTGGATTTAAGGGGCTTTTTTATGAGTTGCGCGTGTG
CCACTGAGCATGCGTCCCTTCGTCCCACTGCTGCCTATTTAATTAGACACTCAGAGTTTGGATT
TTGTACCATTTCAGCTCCGTATGTCTCTAGGCTTCTTTTGAAATTGAGTTTTTATTTTCACTGA
CAATACTGCGTGGCTTATCTCTTATCATGTCACCATAAACTGTAATATTTTCGATGGTTCTAGA
TCAGAGTTATTTATTTAGAAGTATACAGAATACTGAAATTTAGATTCCTTATACCTAAGGCTGA
TTTTATTAGAAGATTATTTTAATGTCCTATATAAATTTTAAGACTTTGTATTCATATCATATGT
AAAATAGGGCCCATTGTCCTGATACTATGGTTCTGTAGAAGCCACTAGTAAGGTCACCCGTGCA
GGCTCCTCTCGACACAAACCTGTTTCACCCTCGTGATTTCTAGTTGCAGGGATTTGGTGATTTT
TGTTTCTGCCAATTTTATGTCAAGAAAAGTTCAAATCTCCCTCCTGTTTACCTCCTTACGGTCA
CTCAAGAGTCCCCTGTGACCTCTGATGTTGTATTTGCCTCTCAGCCACCTTGGTCACATTTCTA
GAACCCTGGATTTCCTGGGAGAATCCAGCAAATGAAAGAGCTGCTAAACGGTGACCCGGCTGTG
TATCCGGAGAGCTGGTGCTCACCACTCAAGGAACCAGAGTGATCGGGAGAAGGCTGACCTCGTG
ACCTAAAGTGGGTGTGAACTCTCACCCAGAAAAAGTAGGGCACCTTTGAAAACTGTAATCGTCA
TTTATTGCATGAATTGGAGTATCCCCCCTGCAGGTGAGAGGATGCTGTCCCACGAATTAGCATC
CAACAACTGTACCGAAATGTCACTCCTCTCATTTGGAAGTACTGACAACTACTCATAACTAGGG
TTCTGAAGAACTGTATCTGAGGGTGTCAAACAAGCTTGTAATTTAAAATCTACACCAACAAAA

hide sequence

RefSeq Acc Id:

XM_039091465 ⟹ XP_038947393

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	93,828,855 - 93,905,497 (+)	NCBI
mRatBN7.2	13	91,296,889 - 91,373,531 (+)	NCBI

RefSeq Acc Id:

XM_573525 ⟹ XP_573525

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	93,828,694 - 93,905,497 (+)	NCBI
mRatBN7.2	13	91,296,740 - 91,373,531 (+)	NCBI
Rnor_6.0	13	97,838,325 - 97,915,131 (+)	NCBI
Rnor_5.0	13	102,848,124 - 102,925,145 (+)	NCBI
RGSC_v3.4	13	95,246,290 - 95,323,173 (+)	RGD

Sequence:

show sequence

TCCGCCCCCAGGCTCCTGTGAGTGGACTCTCCGGGTGTGTCCGGGCTGGAACTCTATGGTCGCC
CGCCCTCCGCACTTCCTCTCTAGCCGCGATCTCACTCTATGCTCCTCGGTCCGGCGGCCAGCCG
GGAGGGGTGCGCAGAGGGAGGCGGGGCGGGAAGGCTAGAGGTGTCTGATTCTCCAGTGCGGCGG
GAGACCCGAGCCGGCGGTGTGACAGCTCGTCGGCCGCCATGTCAGCGAGCCGGGCTGGAAACAG
ACTCGGCGCCCGGCTGTAGCCCTTGCGATGCCTCGGATGCCCAGGCATGGAAGGACTTTGACAA
GACGCTAAACAGTTCAACAAAAGATGCGCTAATGGATGACAGCGACTCTCCTACATACAGTCTG
CAGATAGAGCCACAAGATGGATGTCATCCGGGGGACAGCGTGGAAAGGAGAGTGACACGCTTGC
CTTCTGTCTCAGATGAAAATGAAAATCAGCTTGCCGGAGACGGGCCTGCACTTCTGACCACCAG
TGACGGTGCCATGGGAAGAGCTGCAGTGTCTGAGCAGGACAGTCTCAACAATAACGAAAGCTGC
CTGTCCAGCTGTGAGGCAGCCCCCAGGGACAACTCAGAAGGTCCCAAAGATGACCCGCCTTCCT
TGGGTGAGGACACAAAGCCACCTGGAAAAAGAAGTCCAAGGGCCAAAAGAGGCGCCCCTAAGAG
CTCAGCACCTCCAGGTGATGGTGTTACACAGATGCCGAATGCAGCCTCACAGGCTGCCGGTGAG
GAGGAGGCTGCCGGAGTGAACGCAAATGACCCACCCAAAGCAGCAGCACTGCAGCCACTCTTCT
CGCTGATCCGAGGAGAGGTGGAGCAGATGGACTCTAGGGCGCTTCCCCTCTTCCTCCACCAGGT
AGCGGAGACCTATTTCCAGGAAGAGGACTATGAGAAAGCAATGAAATTCATTCAGCTTGAACGA
CTGTATCATGAGCAATTGCTTGCCAATCTTTCTGCCATTCAGGAACAGTGGGAAACAAAATGGA
AATCTGTCCAGCCAAGCACCAAGAAGCCTCTGAGGAATTCAGAAAAGGGATTTAATGGTGAAGA
TTTTGAACAGCTTGCTAAAATTTGCACAACTCATCAAGACCCTCTCTTGTCCAAGCTTAAGATA
GTACCTGTGGAGCAGTCACCAGGGAAGAAAGGCTTTCCGAGGGTGACAATGTCTGACGAGCCGA
TGGAGAGAGGAGCAACAGCCAAAGAGCCAGAGATTGAAACCTGCCCCGGCACGGGTCCAAGTGG
AGGCCGGCATGAGGAGGAGCCCCAGGAGAGCAGCCCTGACTGTCCTCAGATGAACTGGCAGACA
GCTTCCCCCGACCTTCCAGGAACTGCAGGGAAGGCGCACACGGAGGCGGAGGCGCTGCCCAATA
CCACACTGGAGCTCCACACCCAGTCCCCAGAGGCAGCTGGGAGCAGGTCAGGGGCAGCTGCTGC
GGAGAATGCCTGTGAGGATGACAGCTGTGTGCAGGCGCCTCCCACAGAGGACCACCCTGATGTG
GCCAGAGCCCCTAAGGAGGTTCCTCCTAGTGAGCCAGTGGCAGAGCCGTTCCCAAGCGGTGACA
TTGCACCGCCTGGGTTGATTTCAGGGGGTAAATATTCACAGACACACCGAAAAGAACTCTGCCT
TCCACTCCAGGACACATTTGAAGCGCTGCCCAGGGACCAGCATTGCAACAGTGAGGTAGCCAAG
CCACGGCAGCCTGATGTCACTGCCAGTGATGGGAAATCAGCACAGAGTCAGACTGGCTTGGAGA
CTGGTCCTGAGAGCGCACTTTGTGGTGACAGGAAAGCCTCTGACGTAAGCACCCTGTGCCCAGA
AGTATGTATGGCCCCAGAAGAAAGGGGGGATAGGGAAGAGCAAGTAAGCAAGGAAACGGAAGAC
TATTTGAACAGCCTTCTGGAAGGATGCTTAAAGGATGTGGAAGACTCCCTGTCCTATGAGAGCA
TCCAGGACGACGACGACTCCGACCTCCTCCAAGACCTCTCTCCTGAAGAAGCCTCCTACAGTCT
CCAGGAGAATCTGCCTCCTGAGGAGAGCGCGCTCTCCCTGGATGATCTGGCCAAGAAGATAGAG
ATCGCAGAGGCCATTCCTGCAGAAGGGCTGGTGTCCATACTGAAGAAGAGGAATGATGCAGTAG
GCGGCCATCCTGCCCAAATGCAGCAGAAGCCGTCCAAGCGCAGAGTGCGGTTCCAGGAAATAGA
CGATAACCTGGACCAAGATGAAGTCGGCGGTGGCTCCTGTGTCCTGCTCATCTTGCTGTGCATA
GCCACCGTTTTCCTCAGCGTTGGAGGGACGGCGCTCTACTGCACTCTGGGTGACATGGAGTCAC
CTGTTTGTACGGACTTTGCTGACAACGTGGACTTCTATTACACTAAGCTGCTGCAGGGGGTGGC
AGGGCTTAAACACTGGGTCTACCTCTCCTAGCAGCAAGGGTGACAGGCGTGACAGGAATGCTGA
CAGACAAAGAAGATGCAAACTTCCCCGACAGCTTTTATTTCAGAAGTCATGTATTCCCCCTCCC
TGGCTTCAAGGACCCAAGGACGGACGTTAGAAACAGCAACATCGAAGAACAGCAGCCCAGAGAG
CACGTTAGAATAATCCCCAGCAGAAGGCAGTGCTGACACAGGCCCTGAGGACAGAGGGAGGGAG
CCTTGGCGAGCATGCCCAAGTCTTTGCCTTCCTAGTGTCCTGTGGGGCTTACACTGAGGGCTAA
AGGACACTCCTGGTTTACAGTCGTGCTCCGAGGGCATTGCCTCCCGCCATCATGCAATAAGTTC
CTTTGTCATCAGAGAGAGTCACCTTATGGCTTCAGTGCCATTTTTTAGTTAATCTTGGGAGCTG
TGTAACTTAAGCCTTGGGCATTACTCTAGATTCTGGTCTTCATTTGTGAAATGGTTGTGTGGGT
GTGTGGAGGTCTAAAGCAGTGATCTCAAGTGGATAGCTGGCATAGGATACAAAGATTACCTTTA
TTCTTTTAACTTGACGACAATGTGCAGGCACAAATCTTTGGAAAAGGCTTACCTGTGAACTAGA
TAAACTGTAGAAACTTTGGCCCTGAACTGAGGAACTAACAGAACTGTGGCAATGAACTTGACAG
GCCTGAAGGCACAGTGACAGAAATCCCAGTTCCCAGGTGAGATTTCACCCTGGCTTCTAAGCTG
CCTCAAGTGTTGATTGCTCAGAGAAACTCACTGAACATCTGTTGTGTTTCTGAGAACCTCAGGA
TAGGAGCCCAGAAAGGCACAGTTCCTTGTGCAGGTGTCTATGGAAGGTGGACCCATACTTTGAT
GACTCAAACAGGCTACCACATGTATGAGTAATCTCAGGCTATACACTTAGGTGTGCAGAATGTG
GGTGTCTATCATGGGCTCATTTTAGACTGCCTCATGAGGGCCTCACACCGTAAAGAGACAAAGG
TCTAGCCGTGTTTAATTCCGTCATTAGATGGCCTTCCCTCATTTGTGGTACAGTGATCTCTCGC
TTAGGAAACTTTGACTTTTTATATTCTAGGTAACATCTGTTTTTAAAAATCATGAATTATAGTT
TTTTAGCAAGTGATCATTATGTTCTGTTTTCCCATTAGGATCATTTGGAAGGAAGAGAGAGAAA
TTGCTTTGTAGATGTTACTGGCTGGCACAGTACCTTCCTTTGCGTTTCTGCCTATTTATTTGGA
GCGTGGATTTAAGGGGCTTTTTTATGAGTTGCGCGTGTGCCACTGAGCATGCGTCCCTTCGTCC
CACTGCTGCCTATTTAATTAGACACTCAGAGTTTGGATTTTGTACCATTTCAGCTCCGTATGTC
TCTAGGCTTCTTTTGAAATTGAGTTTTTATTTTCACTGACAATACTGCGTGGCTTATCTCTTAT
CATGTCACCATAAACTGTAATATTTTCGATGGTTCTAGATCAGAGTTATTTATTTAGAAGTATA
CAGAATACTGAAATTTAGATTCCTTATACCTAAGGCTGATTTTATTAGAAGATTATTTTAATGT
CCTATATAAATTTTAAGACTTTGTATTCATATCATATGTAAAATAGGGCCCATTGTCCTGATAC
TATGGTTCTGTAGAAGCCACTAGTAAGGTCACCCGTGCAGGCTCCTCTCGACACAAACCTGTTT
CACCCTCGTGATTTCTAGTTGCAGGGATTTGGTGATTTTTGTTTCTGCCAATTTTATGTCAAGA
AAAGTTCAAATCTCCCTCCTGTTTACCTCCTTACGGTCACTCAAGAGTCCCCTGTGACCTCTGA
TGTTGTATTTGCCTCTCAGCCACCTTGGTCACATTTCTAGAACCCTGGATTTCCTGGGAGAATC
CAGCAAATGAAAGAGCTGCTAAACGGTGACCCGGCTGTGTATCCGGAGAGCTGGTGCTCACCAC
TCAAGGAACCAGAGTGATCGGGAGAAGGCTGACCTCGTGACCTAAAGTGGGTGTGAACTCTCAC
CCAGAAAAAGTAGGGCACCTTTGAAAACTGTAATCGTCATTTATTGCATGAATTGGAGTATCCC
CCCTGCAGGTGAGAGGATGCTGTCCCACGAATTAGCATCCAACAACTGTACCGAAATGTCACTC
CTCTCATTTGGAAGTACTGACAACTACTCATAACTAGGGTTCTGAAGAACTGTATCTGAGGGTG
TCAAACAAGCTTGTAATTTAAAATCTACACCAACAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001417721	(Get FASTA)	NCBI Sequence Viewer
	NP_001417722	(Get FASTA)	NCBI Sequence Viewer
	XP_006250473	(Get FASTA)	NCBI Sequence Viewer
	XP_038947393	(Get FASTA)	NCBI Sequence Viewer
	XP_573525	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000003641.9
	ENSRNOP00000078188
	ENSRNOP00000078188.1

RefSeq Acc Id:	XP_573525 ⟸ XM_573525
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZKG8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLLGPAASREGCAEGGGAGRLEVSDSPVRRETRAGGVTARRPPCQRAGLETDSAPGCSPCDASD AQAWKDFDKTLNSSTKDALMDDSDSPTYSLQIEPQDGCHPGDSVERRVTRLPSVSDENENQLAG DGPALLTTSDGAMGRAAVSEQDSLNNNESCLSSCEAAPRDNSEGPKDDPPSLGEDTKPPGKRSP RAKRGAPKSSAPPGDGVTQMPNAASQAAGEEEAAGVNANDPPKAAALQPLFSLIRGEVEQMDSR ALPLFLHQVAETYFQEEDYEKAMKFIQLERLYHEQLLANLSAIQEQWETKWKSVQPSTKKPLRN SEKGFNGEDFEQLAKICTTHQDPLLSKLKIVPVEQSPGKKGFPRVTMSDEPMERGATAKEPEIE TCPGTGPSGGRHEEEPQESSPDCPQMNWQTASPDLPGTAGKAHTEAEALPNTTLELHTQSPEAA GSRSGAAAAENACEDDSCVQAPPTEDHPDVARAPKEVPPSEPVAEPFPSGDIAPPGLISGGKYS QTHRKELCLPLQDTFEALPRDQHCNSEVAKPRQPDVTASDGKSAQSQTGLETGPESALCGDRKA SDVSTLCPEVCMAPEERGDREEQVSKETEDYLNSLLEGCLKDVEDSLSYESIQDDDDSDLLQDL SPEEASYSLQENLPPEESALSLDDLAKKIEIAEAIPAEGLVSILKKRNDAVGGHPAQMQQKPSK RRVRFQEIDDNLDQDEVGGGSCVLLILLCIATVFLSVGGTALYCTLGDMESPVCTDFADNVDFY YTKLLQGVAGLKHWVYLS hide sequence

RefSeq Acc Id:	XP_006250473 ⟸ XM_006250411
- Peptide Label:	isoform X2
- UniProtKB:	D3ZKK3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAWKDFDKTLNSSTKDALMDDSDSPTYSLQIEPQDGCHPGDSVERRVTRLPSVSDENENQLAGD GPALLTTSDGAMGRAAVSEQDSLNNNESCLSSCEAAPRDNSEGPKDDPPSLGEDTKPPGKRSPR AKRGAPKSSAPPGDGVTQMPNAASQAAGEEEAAGVNANDPPKAAALQPLFSLIRGEVEQMDSRA LPLFLHQVAETYFQEEDYEKAMKFIQLERLYHEQLLANLSAIQEQWETKWKSVQPSTKKPLRNS EKGFNGEDFEQLAKICTTHQDPLLSKLKIVPVEQSPGKKGFPRVTMSDEPMERGATAKEPEIET CPGTGPSGGRHEEEPQESSPDCPQMNWQTASPDLPGTAGKAHTEAEALPNTTLELHTQSPEAAG SRSGAAAAENACEDDSCVQAPPTEDHPDVARAPKEVPPSEPVAEPFPSGDIAPPGLISGGKYSQ THRKELCLPLQDTFEALPRDQHCNSEVAKPRQPDVTASDGKSAQSQTGLETGPESALCGDRKAS DVSTLCPEVCMAPEERGDREEQVSKETEDYLNSLLEGCLKDVEDSLSYESIQDDDDSDLLQDLS PEEASYSLQENLPPEESALSLDDLAKKIEIAEAIPAEGLVSILKKRNDAVGGHPAQMQQKPSKR RVRFQEIDDNLDQDEVGGGSCVLLILLCIATVFLSVGGTALYCTLGDMESPVCTDFADNVDFYY TKLLQGVAGLKHWVYLS hide sequence

Ensembl Acc Id:

ENSRNOP00000003641 ⟸ ENSRNOT00000003641

RefSeq Acc Id:	XP_038947393 ⟸ XM_039091465
- Peptide Label:	isoform X3

Ensembl Acc Id:

ENSRNOP00000078188 ⟸ ENSRNOT00000119104

Protein Domains

Consortin C-terminal Consortin N-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZKK3-F1-model_v2	AlphaFold	D3ZKK3	1-786	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1564833	AgrOrtholog
BioCyc Gene	G2FUF-17145	BioCyc
Ensembl Genes	ENSRNOG00000002710	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000003641.9	UniProtKB/TrEMBL
	ENSRNOT00000119104	ENTREZGENE
	ENSRNOT00000119104.2	UniProtKB/TrEMBL
InterPro	Consortin	UniProtKB/TrEMBL
	Consortin_C	UniProtKB/TrEMBL
	Consortin_N	UniProtKB/TrEMBL
KEGG Report	rno:498297	UniProtKB/TrEMBL
NCBI Gene	498297	ENTREZGENE
PANTHER	CONSORTIN	UniProtKB/TrEMBL
	PTHR28581	UniProtKB/TrEMBL
Pfam	Consortin_C	UniProtKB/TrEMBL
	Consortin_N	UniProtKB/TrEMBL
PhenoGen	Cnst	PhenoGen
RatGTEx	ENSRNOG00000002710	RatGTEx
UniProt	A0A8I5ZKG8	ENTREZGENE, UniProtKB/TrEMBL
	A6JGF5	ENTREZGENE, UniProtKB/TrEMBL
	D3ZKK3	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Cnst	consortin, connexin sorting protein	LOC100912475	consortin-like	Data merged from RGD:6486562	737654	PROVISIONAL
2012-07-05	LOC100912475	consortin-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2010-02-12	Cnst	consortin, connexin sorting protein	RGD1564833	similar to 9630058J23Rik protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1564833	similar to 9630058J23Rik protein	RGD1564833_predicted	similar to 9630058J23Rik protein (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1564833_predicted	similar to 9630058J23Rik protein (predicted)	LOC498297	similar to 9630058J23Rik protein	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC498297	similar to 9630058J23Rik protein			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD