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Gene: Syt16 (synaptotagmin 16) Rattus norvegicus

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Symbol:

Syt16

Name:

synaptotagmin 16

RGD ID:

1564654

Description:

Predicted to enable identical protein binding activity and phospholipid binding activity. Orthologous to human SYT16 (synaptotagmin 16); INTERACTS WITH 17beta-estradiol; 6-propyl-2-thiouracil; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC299142; RGD1564654; similar to synaptotagmin XIV-related protein Strep14; synaptotagmin XVI; synaptotagmin-16

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SYT16 (synaptotagmin 16)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, Panther
Mus musculus (house mouse):	Syt16 (synaptotagmin XVI)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Syt16 (synaptotagmin 16)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SYT16 (synaptotagmin 16)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SYT16 (synaptotagmin 16)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Syt16 (synaptotagmin 16)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SYT16 (synaptotagmin 16)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SYT16 (synaptotagmin 16)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Syt16 (synaptotagmin 16)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Syt16 (synaptotagmin 16)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	SYT16 (synaptotagmin 16)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Syt16 (synaptotagmin XVI)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	syt16 (synaptotagmin XVI)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	syt16 (synaptotagmin XVI)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PhylomeDB)
Drosophila melanogaster (fruit fly):	Syt14	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Syt14	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	syt16	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	98,456,582 - 98,735,306 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	98,457,274 - 98,707,936 (+)	Ensembl				GRCr8
mRatBN7.2	6	92,721,415 - 92,972,140 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	92,721,101 - 92,971,748 (+)	Ensembl				mRatBN7.2
Rnor_6.0	6	97,076,304 - 97,199,856 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	97,110,158 - 97,198,899 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	106,340,012 - 106,466,441 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	6	106,536,889 - 106,630,139 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	96,684,622 - 96,774,478 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	91,177,534 - 91,427,252 (+)	NCBI		Celera
Cytogenetic Map	6	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (EXP)

3,4-methylenedioxymethamphetamine (ISO)

6-propyl-2-thiouracil (EXP)

benzo[a]pyrene (ISO)

Benzo[ghi]perylene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP)

CGP 52608 (ISO)

diallyl trisulfide (ISO)

diuron (EXP)

indole-3-methanol (EXP)

iron dichloride (ISO)

lipopolysaccharide (ISO)

maneb (ISO)

N-nitrosodiethylamine (EXP)

okadaic acid (ISO)

paraquat (ISO)

potassium dichromate (ISO)

progesterone (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

sodium arsenite (ISO)

Soman (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

identical protein binding (IEA,ISO)

phospholipid binding (IBA,IEA,ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12801916

Genomics

Comparative Map Data

Syt16
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	98,456,582 - 98,735,306 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	98,457,274 - 98,707,936 (+)	Ensembl				GRCr8
mRatBN7.2	6	92,721,415 - 92,972,140 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	92,721,101 - 92,971,748 (+)	Ensembl				mRatBN7.2
Rnor_6.0	6	97,076,304 - 97,199,856 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	97,110,158 - 97,198,899 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	106,340,012 - 106,466,441 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	6	106,536,889 - 106,630,139 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	96,684,622 - 96,774,478 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	91,177,534 - 91,427,252 (+)	NCBI		Celera
Cytogenetic Map	6	q24	NCBI

SYT16
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	61,812,162 - 62,112,825 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	61,811,849 - 62,112,550 (+)	Ensembl			hg38	GRCh38
GRCh37	14	62,278,880 - 62,579,268 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	61,532,294 - 61,638,180 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	14	61,532,490 - 61,637,178	NCBI
Celera	14	42,513,014 - 42,618,887 (+)	NCBI		Celera
Cytogenetic Map	14	q23.2	NCBI
HuRef	14	42,626,244 - 42,732,142 (+)	NCBI		HuRef
CHM1_1	14	62,401,963 - 62,507,860 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	56,019,035 - 56,320,045 (+)	NCBI		T2T-CHM13v2.0

Syt16
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	74,044,490 - 74,314,690 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	74,044,435 - 74,320,041 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	12	73,997,624 - 74,267,916 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	73,997,661 - 74,273,267 (+)	Ensembl			mm10	GRCm38
MGSCv37	12	75,098,748 - 75,368,903 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	12	74,916,599 - 75,186,752 (+)	NCBI		MGSCv36	mm8
Celera	12	75,111,274 - 75,381,064 (+)	NCBI		Celera
Cytogenetic Map	12	C3	NCBI
cM Map	12	32.02	NCBI

Syt16
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955466	7,601,796 - 7,797,793 (-)	Ensembl
ChiLan1.0	NW_004955466	7,600,990 - 7,927,710 (-)	NCBI	ChiLan1.0	ChiLan1.0

SYT16
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	62,942,429 - 63,243,109 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	62,158,948 - 62,459,623 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	42,412,445 - 42,713,118 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	60,827,456 - 60,958,659 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2

SYT16
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	36,820,031 - 36,945,267 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	36,839,334 - 36,934,378 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	36,460,224 - 36,697,689 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	36,940,898 - 37,174,933 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	36,940,215 - 37,173,360 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	36,550,398 - 36,784,298 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	36,627,803 - 36,869,264 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	36,990,302 - 37,225,514 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Syt16
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	68,067,673 - 68,201,771 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936495	5,998,614 - 6,123,440 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936495	5,998,728 - 6,123,975 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SYT16
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	190,735,881 - 191,031,684 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	190,735,897 - 191,059,715 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	212,388,776 - 212,464,354 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SYT16
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	39,180,924 - 39,282,687 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	39,181,068 - 39,280,083 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666053	27,242,975 - 27,557,915 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Syt16
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	39,030,391 - 39,213,851 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624734	39,030,188 - 39,155,210 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Syt16
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	7	88,487,767 - 88,518,570 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Syt16
1816 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	202
Count of miRNA genes:	84
Interacting mature miRNAs:	90
Transcripts:	ENSRNOT00000012374, ENSRNOT00000064208
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4145119	Mcs25	Mammary carcinoma susceptibility QTL 25		0.0001	mammary gland integrity trait (VT:0010552)	ratio of deaths to total study population during a period of time (CMO:0001023)	6	71278722	116278722	Rat
70176	Mcsm1	Mammary carcinoma susceptibility modifier QTL 1			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	64367996	109367996	Rat
2293088	Iddm28	Insulin dependent diabetes mellitus QTL 28	5.21		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	6	68767270	135411972	Rat
1331799	Bp211	Blood pressure QTL 211	3.66407		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	88019181	136741135	Rat
1581563	Uae33	Urinary albumin excretion QTL 33			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	93560258	136550638	Rat
10054138	Gmadr3	Adrenal mass QTL 3	3.68	0.00045	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	6	90871046	135871046	Rat
724524	Uae2	Urinary albumin excretion QTL 2	2.7	0.0005	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	79198463	144254945	Rat
4889933	Bss88	Bone structure and strength QTL 88	3.8		tibia size trait (VT:0100001)	tibia total bone volume (CMO:0001724)	6	53684921	98684921	Rat
737827	Hcar11	Hepatocarcinoma resistance QTL 11	4.4		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	6	46050607	116278722	Rat
2303624	Vencon5	Ventilatory control QTL 5	4.45		respiration trait (VT:0001943)	minute ventilation (CMO:0000132)	6	93778632	138778632	Rat
1576309	Emca7	Estrogen-induced mammary cancer QTL 7	4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	20859430	113082285	Rat
2293837	Kiddil1	Kidney dilation QTL 1	3.7		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	86867923	110125012	Rat
2293842	Kiddil3	Kidney dilation QTL 3	4.3		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	86867923	110125012	Rat
61329	Eae9	Experimental allergic encephalomyelitis QTL 9	3.7		body mass (VT:0001259)	change in body weight (CMO:0002045)	6	84490437	129490437	Rat
10054123	Srcrt6	Stress Responsive Cort QTL 6	2.5	0.0043	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	90871046	135871046	Rat
724536	Uae7	Urinary albumin excretion QTL 7	3.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	6	93560258	136550638	Rat
5684963	Bss99	Bone structure and strength QTL 99	3.1		tibia area (VT:1000281)	tibia area measurement (CMO:0001382)	6	53684921	98684921	Rat
1576302	Schws4	Schwannoma susceptibility QTL 4		0.0078	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	6	78204640	123204640	Rat
1581550	Pur8	Proteinuria QTL 8			urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	6	93560258	136550638	Rat
5684992	Bmd83	Bone mineral density QTL 82	4.8		tibia mineral mass (VT:1000283)	bone mineral content (CMO:0001554)	6	53684921	98684921	Rat
1300075	Glom7	Glomerulus QTL 7	5.6	0.0000002	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	6	76937178	121937178	Rat
1331789	Rf37	Renal function QTL 37	3.224		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	6	86494122	112380234	Rat

Markers in Region

BF386260

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	92,865,553 - 92,865,726 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	97,093,092 - 97,093,264	NCBI	Rnor6.0
Rnor_5.0	6	106,523,375 - 106,523,547	UniSTS	Rnor5.0
RGSC_v3.4	6	96,667,796 - 96,667,968	UniSTS	RGSC3.4
Celera	6	91,320,982 - 91,321,154	UniSTS
RH 3.4 Map	6	656.5	UniSTS
Cytogenetic Map	6	q24	UniSTS

RH135395

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	92,882,349 - 92,882,538 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	97,110,124 - 97,110,312	NCBI	Rnor6.0
Rnor_5.0	6	106,540,407 - 106,540,595	UniSTS	Rnor5.0
RGSC_v3.4	6	96,684,588 - 96,684,776	UniSTS	RGSC3.4
Celera	6	91,337,693 - 91,337,881	UniSTS
RH 3.4 Map	6	658.2	UniSTS
Cytogenetic Map	6	q24	UniSTS

RH139408

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	92,971,941 - 92,972,070 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	97,199,658 - 97,199,786	NCBI	Rnor6.0
Rnor_5.0	6	106,629,941 - 106,630,069	UniSTS	Rnor5.0
RGSC_v3.4	6	96,775,237 - 96,775,365	UniSTS	RGSC3.4
Celera	6	91,427,054 - 91,427,182	UniSTS
RH 3.4 Map	6	655.8	UniSTS
Cytogenetic Map	6	q24	UniSTS

RH139581

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	92,971,887 - 92,972,070 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	97,199,604 - 97,199,786	NCBI	Rnor6.0
Rnor_5.0	6	106,629,887 - 106,630,069	UniSTS	Rnor5.0
RGSC_v3.4	6	96,775,183 - 96,775,365	UniSTS	RGSC3.4
Celera	6	91,427,000 - 91,427,182	UniSTS
RH 3.4 Map	6	666.19	UniSTS
Cytogenetic Map	6	q24	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
15	8	35	151	52	51	21	25	21	6	198	82	138	74	90	30	16	16

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001428632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428635	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428636	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001077814	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764730	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008776257	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008776258	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594463	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017603245	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039113257	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262672	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262673	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262674	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_234300	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000085790 ⟹ ENSRNOP00000073959

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	6	97,168,453 - 97,198,899 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000088430 ⟹ ENSRNOP00000073667

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	98,540,974 - 98,707,936 (+)	Ensembl
mRatBN7.2 Ensembl	6	92,721,101 - 92,971,748 (+)	Ensembl
Rnor_6.0 Ensembl	6	97,110,158 - 97,198,899 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000113442 ⟹ ENSRNOP00000086006

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	98,457,274 - 98,707,934 (+)	Ensembl
mRatBN7.2 Ensembl	6	92,961,331 - 92,971,748 (+)	Ensembl

RefSeq Acc Id:

XM_039113257 ⟹ XP_038969185

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	98,457,185 - 98,735,306 (+)	NCBI
mRatBN7.2	6	92,721,415 - 92,972,140 (+)	NCBI

RefSeq Acc Id:

XM_063262671 ⟹ XP_063118741

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	98,618,167 - 98,735,306 (+)	NCBI

RefSeq Acc Id:

XM_063262672 ⟹ XP_063118742

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	98,456,582 - 98,735,306 (+)	NCBI

RefSeq Acc Id:

XM_063262673 ⟹ XP_063118743

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	98,537,633 - 98,735,306 (+)	NCBI

RefSeq Acc Id:

XM_063262674 ⟹ XP_063118744

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	98,676,535 - 98,735,306 (+)	NCBI

RefSeq Acc Id:

XM_234300 ⟹ XP_234300

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	98,618,167 - 98,735,306 (+)	NCBI
mRatBN7.2	6	92,882,348 - 92,972,140 (+)	NCBI
Rnor_6.0	6	97,106,606 - 97,199,856 (+)	NCBI
Rnor_5.0	6	106,536,889 - 106,630,139 (+)	NCBI
RGSC_v3.4	6	96,684,622 - 96,774,478 (+)	RGD

Sequence:

show sequence

TCTATCCCACCACCTATCTACTCATCCATCTACCCATATGCAATCTATCTATCCAGCTGCCCAT
CTACCCATTTATCTATCCATCTAGCCTCATCCATCCATGCACATACCAATCTACCTACCAACTT
ATTCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCAGCATGTTCAGG
ACTCCTTCCTGCTTCATGTGGGTTCTGAAGCTGTAACCTATAAAAATATTTCCCAAACTTGTAA
AGTACTAATCCATCAGAAGAATATTGACAAATAGATGCAACTTTATAACATAAAGTCATGTTCT
AAGTGCTCTGAGACCATGGCTTTGGCTGTAGATGAAGAATTAGCAGACGAAGAAAAGCTAGTAG
AGTTTCAATGAAAAAATGAGGCATGCTAGGTGTGAGGGCAACCTGGGAAACCAAAAGTCAGGAA
AAATCAAGGCGATTTGTGAAAATACTCAGAATATCAGCATGACTGACATATAGGATCTCACAGG
GAGGGACGATAGGGAAGAGTCCTCACTCTGTGGCAGTTTGTTTGGGGTCATCTCATGCTCAGCT
GGACATTCTGTTAGAATGAAAGGTGGGGCTGCATGTGTGGTAAGGACAGGAGTAAGTGGCTAAA
GCCACTGATTCCTCCAAGAGACCTTCCAGGTCTCAAACACCTCCGAGCACTATTGCTTAGGCAA
AATGATTTCTGGGTCAAATGTAAAAGGAATGAAGTCATTCCCACAGCAAAGGCAACCCAAAGTG
GTGGATTGTTAAATTGGGTGGAGCAAATGCTGATAGGAAAATGTACTAAACAGAAAGTTTGTGG
AATAACACCATTGAGGAGCTTCACCACAGAGCTTTGAGTAGGTTTTATTTATTAATTTTAACAA
AATTATCTTATAAGTAATTTTTAATGAGCACTGTTCGTGCACATGATTCTAGTGAGATTTTATT
GACTGGTGATTTGCTTTTGGTATGTTCAATTCATATCTCAGCACTGAGATAGAGCAAAGCAGAT
GGCCTTCATTCTTCATGGATCCTCTATTCCAGAGGTAGAGAGGCAGTGACTCTGAATGAAGGCC
GGGTTGTGGGGAACAGAGGGTTTGATGGAAGCTGAGAAAGACAAGAGACTGAATGACACGAGTG
GGTGACATGGGAGAACAGGATCATGGGAAAACTGATGGCTTGAAGAATGAAGGCTGATGGGAGA
TTGATTAGAAGGAACAGAAGGGCAGTGGGTTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGTGTCACAGTGATTGAGGTCCTGTAACCCAAGAGGTGAATCCCTACAGCA
AAGTGACGTGCTGGGTTTGAAATAACTGAATTTGAGCTTTTGGTGACATATTAATGTAGAGCAT
GTAGTTATTTGCTTACATCACTTTTATTGTTGTTGTTGCTTTTTGTTTTTTAAAATCGACCTTT
AGTAGGGTTTGGCTTTCTGGGAAGATAACAGAAACACAGGGGGCTAAGCCAGGCTTATTTTTGC
AGCCAACTTAGACCTTTCCATGTTCTGCTATTTTATTGATGAGTCAGAACTACCAAAGTTTGCA
CGGCACTGACTTGAATCTGTGAGAGGAGTAAGAAAAGAGCAAGCTAAGCACTGATGATATGTAT
TTCGGGTTTATAAAAGTTTAAAATTAAAACAGAGTTGAAGCTGGGGTGTACTTCATCAGCCATG
CTTCCTGGAATGCAGAAGGCCCCTGAGTTTGGTCCCCAGCACCGTATAGACAAGCTGCAGTGGT
ACATGTCTGTATTCCTAGCACTCAGGCTATAAAGGCATAAGGATAAGTTCAAGGTCATCTTTGG
CTGTTTTGCAAGTTGAAGATCAGCTCACGATCTGTGAGACCATCTCAAACCAACCAACCAACCA
ACCAACCACCCAATATACCAAGTAATCAATCCAAAGAAACCAAAACCAACCAAAGAGACAAAGG
TAGTGATGGGCCAGCCTTCCCAGCAGGTGAGTATAAATGGGAATGACAAGAAGCATGGAACACT
GAGTGGTTGCACATACACTGTGAGAGGAGGTCAAGTGCTATACAGTGATACATGAATTATTCCG
TTCAAGAGGAAAATGCAGAAAGCCCAGTTCCTCCTTAGCTGAAATGCAAGTTCCATAGGACAGA
GGCCTCAGGGTTACCTTTTTCCTGGCATTCTGCCCAGTACTTAATAGGTGCTTGGTCAGTATTT
GTTATTTGTTTACTGAATGAATCAAGGCACCTATGAATCACTAACGAGAAACTTTTAAGGGAAA
TTAAGCAGTTGTACTAAAGGCTAAGATCAAGAGGCTTGAAGCTTCAGGAATGGAGTGATTCAGA
GGGGGGGATGTTGTTATCATAGAAGCAACTGATAGCATTTATCCTTCACTGGGATAGCAATGGG
ATTACCTATATCCATGTATAGATGTAAATCTGCCCAGGCTTGCGTTTGCACATGAGTGTACAAA
TATAGGCACAGTCCCTTTGATCATCACCGTGCCCTGCTGTTTTATGGGTGTCCCCAAGCTACTC
CTTTCAGACTCTGATCTTACGGTACGTTTGAGAAGACATGCAGGTTACAGAGGGCCAACTTCAG
GAGATGGGGACACAGACAAAGGCAGAAGACGCTAAGGAAGCTGCATGATCCATTTGCCATGCAC
ACATATTCAGTACGATTTCTCCCCAAGAATAGACACCATTTCTAGAGATTGCCTAAAACTGTAA
AACTCTATTTTTAAGATTTGTTGGAAGCGTTGAAATTCCAGACACATATTTCCTTTGAGAGGAT
AAACCTTTGTGTCTCAAAACAGAGATGCCTGTTCGTTAGCTCTCTGGGGTCTGCATGTTTGTGC
ACGAAACCTCCGGTTTTTCTTGCATTTTGAAGTGTCATGCCTAACTGGCTGTTCCCACAGATTC
CTTTACTCTTCTCACATTGTTAAACTGGTCTATGGGGAGCGACTTCTTCCAGTCCACATGACTA
GAATCTGTTGTTGCAATAGAAGTTGGGCGTGAGTGTGAGGAGGTGTACAATCGTGGGTAGAACC
CACATTTAGATGTTCAAGGTCATTTTATTTAGCCATCATGAGAGTTCAGTATAATCTTTCTCTG
TCCCCCAAATGCTGCTTGATATTGACTACAGGTATCTGGTGATGGGTCCACAGTGTGACTTTAA
CAGGTGTGAGCATGTCTCTCCTCTGTTTCAGCTGAGACGTGTTGAGAGTGAAATGGTCACAGCC
ACTAAGAGACCACCACCCTATCAAACACAGTTGCTCTGTTCCCTGCAAAGACCTACTCCATAGA
CCTTGGTGCAAGAACCAGCATGCTGCCTGGTTTTACTTACTGCCAACGGTGCTTACGTACTGCA
CATGTTTTCTTTATGTGTACATTAATAAAGTTTTGCCTGTTATAAAAAAAAACAGAGACCTCCA
GTTAAATTTCTCCTTATGCTCATGCTATATTTCACGTACGTTCAGAGTTCTGGAGGAACCAAAC
AAGCAGACTCTGGAGACACGAGGTAGTTGGTCATGGTGTTGGTCATGGCATCTCAAGATGTCCA
GAACTTCTTCCAACCTTTGTCCTCCTGGCTCTCCCGAGTTTATGAAGCTCTCCAGCAAGCCGGG
GATGCCTTATCTGCTTCACTGGTTCTTCTTAGCAAACACGATTCGGCACTGAGTGATAAGCCAG
AGCAGGACTTAGATGCTATTCAGATTCAGGAAACCTGCTTGGAAGATGGAGAACAGGACAACGA
TGGGGGTCCAGAGGAGACAGGCTCCCTGTTTCTTGAAGAGGACCATTTCTCAAGCTCTAATAGT
GATTTGCGGGACTCTGTCCAGACGGCAAGCCTCAGACTTGGTCAGCAAGCCAAAGACTCAAGCA
CTGTAATTTCCCAGTGGCCCAATAAGATCCCAGGTGGCCCAAAGCCCCCACATGTGCTTTCTTC
TATCGCTGAGGAGGAACATCACTCTGAGGGGCAGAGATGTGACCTTCAGCATGGCTCTGACACC
CAGCTTCCCGGCTCTTTAGAAAAAGTTAACGGAAGAAAGCAAGCTAACAGCTTTGGGGATGATG
AAGAGCCATCCACATCTTCTGAGAGCGATGAAGATGTGACTAAGCAGTTCGAGATCTCGGTGTC
CCGATCCCAGAGTTTTCGTACAGGAGTACCTGAGAAGGGAAAGACAACAGAGTTGGAGCAGAAA
ACAAAATGCAAACATTTCCTGTGTACCCACCAAGAAGACAGCGCTGAAGGGTCTGCATGTGAAG
ATTTGGATGGACCCAGCCAACTCAGTTATTCTGAGATTCGGTCTTACGAAGACCGCCCCATTTC
CATTCTCTCACAATCTCCCTGTGAGAGCAGGGACACCAGGCACCATGGCCCTTGTCATCTGGGC
GCTGGCGTGGTCCGAAACCTCAGTCGTCCTTGTGCAGATGGCATCCTGGAGACAGAGACAGCGT
TTATCAGTCGGGGCTTTGAAGATCCCTATGCCACCCACAACTCCTCTATGTGGAGTCCAGAGGA
GCAGGATGGGACCAGTCTGCAGGTACCACCAAGGCTTCCGGAGCCTATCTCAAAATGTGGGGAC
CTCGATGTCATCTTTGAATATAGAGCTGTAACCCAGAAGCTTACCGTGACCATTGTGAGAGCAC
AGGGTCTCCCAGATAAGGACCGAAGTGGTGTCAACTCCTGGCAAGTTCACATAGTGCTACTGCC
CAGTAAGAAACAGAGGGGTAAGACGAATATACAGAGAGGGCCCAACCCTGTCTTCAAGGAAAAG
GTCACCTTCACCAAGCTGGAGCCCAGAGATGTGGCTGCCTGTGCTGTCCGCTTCCGCCTGTATG
CTGCCCGGAAGATGACCCGAGAGAGAATGATGGGAGAGAAGCTGTTCTGTCTTAGCCACTTGCA
CCCAGAAGGGGAAATGAAAGTGACTCTAGTTCTGGAGCCCAGAAGTAATCTGAGCAGTGGAGAG
TCTCCCCTCAGCCCATCTGTGGTGTCTCACAGTGACAGTGCTTCATCCACACAGTCACTGTCTC
ATGGAGGAGTGCCAGAGCTACTGGTGGGACTGTCCTACAATGCCACAACAGGGCGATTATCTGT
GGAAATGATCAAAGGCAGCCATTTCCGCAACCTCGCTGCTAACCGAGCTCCCGATACATATGGA
AAACTCTTCCTCCTCAACTGTGTGGGTCAAGAGATGTCCCGCTGCAAGACGTCCATTCGGCGTG
GCCAGCCCAACCCCGTCTATAAAGAGACCTTCGTCTTCCAGGTGGCCCTCTTCCAGCTCTCGGA
TGTTACCTTGATGATTTCCATTTATAGCAGACGCACAATGAAGCGTAAAGAGATGATTGGCTGG
ATTGCTCTGGGCCAGAACAGCAGTGGGGAGGAGGAGCAGGAGCACTGGGACGAAATGAAGGACA
GCAAAAGCCAGCAGATCTGCAGGTGGCATACGCTGTTGGAATCCTAGGTTTATCAACAGCGTTC
CCGTGCTACGTCAGCCTTGCTTACCTAACACCAAGTCAGATCATGGCAGGTGGAGGAGCTTTCA
AATGGAGAATTTTACTAATCTTGGGTCATTCCGTGGTGTGGAACCATCTCAAAGGTTCGATCTG
AGTTTAAATGTTGTCGTGAAAGGAAACCTACATACACAGTATGGGCAATGGTATCTAGTTGAGA
CCACTGGCTATATCACAACTTGTGCTAATGGATGATTGTGTTTTGGTTCGTACTATGTGGTTCA
GCTTCCTCCTGCTGTCTCTTTTTGCTGGGAGAATAGCCTGAGATTTCAAAGGAGCTGTAAACAT
TACTGTTTTCCATCACTGAGGTGTATGAATCAGACTCTTCTCAGTGTTCAAAATTCCAAAACAG
AAATGAATCAGATGCTGAGCGTTACGGAAGGACGTAACCCACCACAGTCCTCTGCCACCCCTAT
TCTCTTTATGGAAAAAAAAAGCCCTGTTTATTTAAAAGGTAATTGCTATAAATTTGTGGTGTAA
AATAAATTTGTATTCATGAAATGTCTCTTTTTATCTCAATTAGATATCACGATTTCTAAAAGAA
TTGGGGTAGACAAATCATCTTAAAGCTCTAAAGCAGTTAAAAAAAATGACTGTTATCTGACCTG
TCTCTTTTTGAATATTTAAGATTTCCAAAGTCAAGGATTTTTGTGCTTTCTTATCAAATTGGTA
CCCAGAGAAGAAGAGGAAAACCTAGGAGATAATTTAAGCCTTGGCTTTCTTGATGTTTCAGAAC
CTGTCATTCATTTGGATTAGACCTTTTCTATAGATAATTGTACTAACTCTCACATGTATTTTTT
TAATGTACTTCTGCATGCCAACCACATTTGTCTTTATGCTATGTACCTTACTAATAGAACATAG
AAAGATGCATACAGTGGATCTCAATAAATACTAATTTGATTGAC

hide sequence

Protein Sequences


Protein RefSeqs	NP_001415561	(Get FASTA)	NCBI Sequence Viewer
	NP_001415562	(Get FASTA)	NCBI Sequence Viewer
	NP_001415563	(Get FASTA)	NCBI Sequence Viewer
	NP_001415564	(Get FASTA)	NCBI Sequence Viewer
	NP_001415565	(Get FASTA)	NCBI Sequence Viewer
	XP_038969185	(Get FASTA)	NCBI Sequence Viewer
	XP_063118741	(Get FASTA)	NCBI Sequence Viewer
	XP_063118742	(Get FASTA)	NCBI Sequence Viewer
	XP_063118743	(Get FASTA)	NCBI Sequence Viewer
	XP_063118744	(Get FASTA)	NCBI Sequence Viewer
	XP_234300	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM03626	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000073667
	ENSRNOP00000073667.1
	ENSRNOP00000086006
	ENSRNOP00000086006.2

RefSeq Acc Id:	XP_234300 ⟸ XM_234300
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K644 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVLVMASQDVQNFFQPLSSWLSRVYEALQQAGDALSASLVLLSKHDSALSDKPEQDLDAIQIQE TCLEDGEQDNDGGPEETGSLFLEEDHFSSSNSDLRDSVQTASLRLGQQAKDSSTVISQWPNKIP GGPKPPHVLSSIAEEEHHSEGQRCDLQHGSDTQLPGSLEKVNGRKQANSFGDDEEPSTSSESDE DVTKQFEISVSRSQSFRTGVPEKGKTTELEQKTKCKHFLCTHQEDSAEGSACEDLDGPSQLSYS EIRSYEDRPISILSQSPCESRDTRHHGPCHLGAGVVRNLSRPCADGILETETAFISRGFEDPYA THNSSMWSPEEQDGTSLQVPPRLPEPISKCGDLDVIFEYRAVTQKLTVTIVRAQGLPDKDRSGV NSWQVHIVLLPSKKQRGKTNIQRGPNPVFKEKVTFTKLEPRDVAACAVRFRLYAARKMTRERMM GEKLFCLSHLHPEGEMKVTLVLEPRSNLSSGESPLSPSVVSHSDSASSTQSLSHGGVPELLVGL SYNATTGRLSVEMIKGSHFRNLAANRAPDTYGKLFLLNCVGQEMSRCKTSIRRGQPNPVYKETF VFQVALFQLSDVTLMISIYSRRTMKRKEMIGWIALGQNSSGEEEQEHWDEMKDSKSQQICRWHT LLES hide sequence

Ensembl Acc Id:

ENSRNOP00000073959 ⟸ ENSRNOT00000085790

Ensembl Acc Id:

ENSRNOP00000073667 ⟸ ENSRNOT00000088430

RefSeq Acc Id:	XP_038969185 ⟸ XM_039113257
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSRNOP00000086006 ⟸ ENSRNOT00000113442

RefSeq Acc Id:	XP_063118742 ⟸ XM_063262672
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063118743 ⟸ XM_063262673
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063118741 ⟸ XM_063262671
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063118744 ⟸ XM_063262674
- Peptide Label:	isoform X3

Protein Domains

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K644-F1-model_v2	AlphaFold	A0A0G2K644	1-644	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1564654	AgrOrtholog
BioCyc Gene	G2FUF-37097	BioCyc
Ensembl Genes	ENSRNOG00000056012	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000088430	ENTREZGENE
	ENSRNOT00000088430.3	UniProtKB/TrEMBL
	ENSRNOT00000113442	ENTREZGENE
	ENSRNOT00000113442.2	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.150	UniProtKB/TrEMBL
InterPro	C2_Ca-dep	UniProtKB/TrEMBL
	C2_domain_sf	UniProtKB/TrEMBL
	SYT14/14L/16	UniProtKB/TrEMBL
NCBI Gene	299142	ENTREZGENE
PANTHER	PTHR46129	UniProtKB/TrEMBL
	PTHR46129:SF4	UniProtKB/TrEMBL
Pfam	PF00168	UniProtKB/TrEMBL
PhenoGen	Syt16	PhenoGen
PROSITE	PS50004	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000056012	RatGTEx
SMART	SM00239	UniProtKB/TrEMBL
Superfamily-SCOP	SSF49562	UniProtKB/TrEMBL
UniProt	A0A0G2K644	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A577_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-11-25	Syt16	synaptotagmin 16	Syt16	synaptotagmin XVI	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-07	Syt16	synaptotagmin XVI	RGD1564654_predicted	similar to synaptotagmin XIV-related protein Strep14 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1564654_predicted	similar to synaptotagmin XIV-related protein Strep14 (predicted)	LOC299142	similar to synaptotagmin XIV-related protein Strep14	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC299142	similar to synaptotagmin XIV-related protein Strep14			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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