Trib2 (tribbles pseudokinase 2) - Rat Genome Database

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Pathways
Gene: Trib2 (tribbles pseudokinase 2) Rattus norvegicus
Analyze
Symbol: Trib2
Name: tribbles pseudokinase 2
RGD ID: 1564451
Description: Predicted to enable RNA polymerase II-specific DNA-binding transcription factor binding activity; enzyme binding activity; and ubiquitin-protein transferase regulator activity. Predicted to be involved in negative regulation of fat cell differentiation; negative regulation of interleukin-10 production; and positive regulation of proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Orthologous to human TRIB2 (tribbles pseudokinase 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3,3',4,4',5-pentachlorobiphenyl; 3,4-methylenedioxymethamphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: hypothetical protein LOC690207; LOC108351208; LOC313974; LOC690207; RGD1564451; similar to Tribbles homolog 2; tribbles homolog 2; tribbles homolog 2 (Drosophila); uncharacterized LOC108351208
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8644,274,762 - 44,299,139 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl644,274,762 - 44,299,094 (-)EnsemblGRCr8
mRatBN7.2638,545,971 - 38,570,349 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl638,545,975 - 38,569,370 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx638,866,451 - 38,890,817 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0639,181,120 - 39,205,490 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0638,614,428 - 38,638,794 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0641,016,722 - 41,040,972 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl641,016,730 - 41,039,437 (-)Ensemblrn6Rnor6.0
Rnor_5.0649,774,728 - 49,799,035 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4639,474,243 - 39,496,718 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera637,860,540 - 37,883,149 (-)NCBICelera
Cytogenetic Map6q16NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(S)-nicotine  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-diaminotoluene  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3,4-methylenedioxymethamphetamine  (EXP)
3-methylcholanthrene  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4-hydroxyphenyl retinamide  (ISO)
4-nitrophenol  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (EXP)
acetamide  (EXP)
acrylamide  (EXP)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (EXP)
amphetamine  (EXP)
arsenous acid  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (ISO)
bilirubin IXalpha  (ISO)
bisphenol A  (EXP,ISO)
cadmium atom  (EXP)
cadmium dichloride  (EXP)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chrysene  (ISO)
cisplatin  (EXP,ISO)
copper atom  (EXP)
copper(0)  (EXP)
crocidolite asbestos  (ISO)
cyclosporin A  (EXP,ISO)
dextran sulfate  (ISO)
diallyl trisulfide  (ISO)
diarsenic trioxide  (ISO)
dibenz[a,h]anthracene  (ISO)
dibutyl phthalate  (EXP,ISO)
diquat  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
entinostat  (ISO)
ethanol  (ISO)
etoposide  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
furan  (EXP)
gentamycin  (EXP)
glycine betaine  (EXP)
GW 501516  (ISO)
hydralazine  (ISO)
ionomycin  (ISO)
irinotecan  (ISO)
iron dichloride  (ISO)
lead diacetate  (ISO)
lipopolysaccharide  (ISO)
methyl methanesulfonate  (ISO)
methylisothiazolinone  (ISO)
mifepristone  (ISO)
mitomycin C  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
nicotine  (ISO)
oxaliplatin  (EXP)
paracetamol  (EXP,ISO)
paraquat  (ISO)
PD 0325901  (ISO)
phenobarbital  (ISO)
phorbol 13-acetate 12-myristate  (ISO)
pirinixic acid  (ISO)
potassium chromate  (ISO)
potassium dichromate  (ISO)
progesterone  (ISO)
pyrrolidine dithiocarbamate  (ISO)
raloxifene  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
silicon dioxide  (EXP)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
sotorasib  (ISO)
sulforaphane  (ISO)
T-2 toxin  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
tetraphene  (ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
trametinib  (ISO)
tricetin  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (ISO)
cytoskeleton  (IEA)
nucleus  (IBA)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9342215   PMID:12477932   PMID:17576771   PMID:18643775   PMID:20410507   PMID:22012613   PMID:28364459   PMID:36626273  


Genomics

Comparative Map Data
Trib2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8644,274,762 - 44,299,139 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl644,274,762 - 44,299,094 (-)EnsemblGRCr8
mRatBN7.2638,545,971 - 38,570,349 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl638,545,975 - 38,569,370 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx638,866,451 - 38,890,817 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0639,181,120 - 39,205,490 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0638,614,428 - 38,638,794 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0641,016,722 - 41,040,972 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl641,016,730 - 41,039,437 (-)Ensemblrn6Rnor6.0
Rnor_5.0649,774,728 - 49,799,035 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4639,474,243 - 39,496,718 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera637,860,540 - 37,883,149 (-)NCBICelera
Cytogenetic Map6q16NCBI
TRIB2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38212,716,936 - 12,742,734 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl212,716,910 - 12,742,734 (+)Ensemblhg38GRCh38
GRCh37212,857,062 - 12,882,860 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36212,774,659 - 12,800,311 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34212,807,805 - 12,833,454NCBI
Celera212,773,761 - 12,799,625 (+)NCBICelera
Cytogenetic Map2p24.3NCBI
HuRef212,706,690 - 12,732,553 (+)NCBIHuRef
CHM1_1212,786,401 - 12,812,238 (+)NCBICHM1_1
T2T-CHM13v2.0212,746,001 - 12,771,799 (+)NCBIT2T-CHM13v2.0
Trib2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391215,841,726 - 15,866,963 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1215,841,728 - 15,866,923 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381215,791,725 - 15,816,962 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1215,791,727 - 15,816,922 (-)Ensemblmm10GRCm38
MGSCv371215,798,533 - 15,823,591 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361215,817,277 - 15,842,335 (-)NCBIMGSCv36mm8
Celera1216,119,723 - 16,144,805 (-)NCBICelera
Cytogenetic Map12A1.1NCBI
cM Map127.25NCBI
Trib2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554876,890,246 - 6,915,135 (+)Ensembl
ChiLan1.0NW_0049554876,889,571 - 6,915,068 (+)NCBIChiLan1.0ChiLan1.0
TRIB2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v212113,781,541 - 113,807,406 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A113,786,011 - 113,811,364 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A12,705,043 - 12,730,932 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A12,847,631 - 12,873,499 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A12,847,631 - 12,873,499 (+)EnsemblpanPan2panpan1.1
TRIB2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1179,225,598 - 9,251,826 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl179,226,017 - 9,249,821 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha179,159,625 - 9,182,294 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0179,331,314 - 9,357,639 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl179,331,347 - 9,420,050 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1179,221,427 - 9,244,277 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0179,220,767 - 9,243,473 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0179,240,169 - 9,263,855 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Trib2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629253,599,159 - 53,622,876 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365328,354,225 - 8,377,895 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365328,354,205 - 8,377,924 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TRIB2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3124,172,098 - 124,196,210 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.13124,170,677 - 124,196,253 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23132,790,605 - 132,816,697 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TRIB2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11494,887,152 - 94,913,219 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604517,401,176 - 17,427,297 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Trib2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248653,475,141 - 3,503,783 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248653,477,831 - 3,503,783 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Trib2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1735,592,314 - 35,616,593 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Trib2
209 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:571
Count of miRNA genes:286
Interacting mature miRNAs:358
Transcripts:ENSRNOT00000005774
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6197587946975879Rat
8693632Alc27Alcohol consumption QTL 272.20.791drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)64005241156848866Rat
634318Bw118Body weight QTL 1183.55abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)63902865963457441Rat
634307Bp141Blood pressure QTL 1414arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)64095756485957564Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)62009763565097635Rat
8552910Pigfal5Plasma insulin-like growth factor 1 level QTL 54.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)62265388967653889Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)62009763565097635Rat
1331779Rf38Renal function QTL 382.876kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)63118500276185002Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6323998948239989Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6197587946975879Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6197587946975879Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6144788383Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6197587946975879Rat
2292616Ept15Estrogen-induced pituitary tumorigenesis QTL 154.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6144788383Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6197587946975879Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62661831486868070Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)620859430113082285Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6323998948239989Rat
2301964Bp323Blood pressure QTL 3234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6186868070Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6323998948239989Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)63332884178328841Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62661831486868070Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)63093763275937632Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)63332884178328841Rat
6893340Cm77Cardiac mass QTL 770.260.57heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)63902865986867923Rat
70199Coreg1Compensatory renal growth QTL 111.8kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)61459947363457687Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)61608937261967788Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6323998948239989Rat
1358190Ept1Estrogen-induced pituitary tumorigenesis QTL 14.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6144788383Rat
1300143Rf14Renal function QTL 142.92renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)64016318385163183Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)62228825767288257Rat

Markers in Region
D6Rat96  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8644,280,844 - 44,281,067 (+)Marker Load Pipeline
mRatBN7.2638,552,053 - 38,552,278 (+)MAPPERmRatBN7.2
Rnor_6.0641,022,805 - 41,023,027NCBIRnor6.0
Rnor_5.0649,780,811 - 49,781,033UniSTSRnor5.0
RGSC_v3.4639,480,326 - 39,480,549RGDRGSC3.4
RGSC_v3.4639,480,327 - 39,480,549UniSTSRGSC3.4
Celera637,866,615 - 37,866,811UniSTS
RGSC_v3.1639,483,280 - 39,483,502RGD
RH 3.4 Map6164.1UniSTS
RH 3.4 Map6164.1RGD
RH 2.0 Map6323.8RGD
SHRSP x BN Map633.0298RGD
Cytogenetic Map6q15UniSTS
AW319517  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2638,546,107 - 38,546,223 (+)MAPPERmRatBN7.2
Rnor_6.0641,016,859 - 41,016,974NCBIRnor6.0
Rnor_5.0649,774,865 - 49,774,980UniSTSRnor5.0
RGSC_v3.4639,474,380 - 39,474,495UniSTSRGSC3.4
Celera637,860,677 - 37,860,792UniSTS
Cytogenetic Map6q15UniSTS
RH132990  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2638,546,027 - 38,546,225 (+)MAPPERmRatBN7.2
Rnor_6.0641,016,779 - 41,016,976NCBIRnor6.0
Rnor_5.0649,774,785 - 49,774,982UniSTSRnor5.0
RGSC_v3.4639,474,300 - 39,474,497UniSTSRGSC3.4
Celera637,860,597 - 37,860,794UniSTS
RH 3.4 Map6163.8UniSTS
Cytogenetic Map6q15UniSTS
Trib2  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2638,546,106 - 38,546,387 (+)MAPPERmRatBN7.2
Rnor_6.0641,016,858 - 41,017,138NCBIRnor6.0
Rnor_5.0649,774,864 - 49,775,144UniSTSRnor5.0
RGSC_v3.4639,474,379 - 39,474,659UniSTSRGSC3.4
Celera637,860,676 - 37,860,956UniSTS
Cytogenetic Map6q15UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 92 59 6 356 192 11 143 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000005774   ⟹   ENSRNOP00000005774
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl644,274,762 - 44,299,094 (-)Ensembl
mRatBN7.2 Ensembl638,545,975 - 38,569,370 (-)Ensembl
Rnor_6.0 Ensembl641,016,730 - 41,039,437 (-)Ensembl
RefSeq Acc Id: NM_001108015   ⟹   NP_001101485
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8644,274,762 - 44,299,094 (-)NCBI
mRatBN7.2638,545,971 - 38,570,305 (-)NCBI
Rnor_6.0641,016,722 - 41,039,437 (-)NCBI
Rnor_5.0649,774,728 - 49,799,035 (-)NCBI
RGSC_v3.4639,474,243 - 39,496,718 (-)RGD
Celera637,860,540 - 37,883,149 (-)RGD
Sequence:
RefSeq Acc Id: XM_039112192   ⟹   XP_038968120
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8644,274,762 - 44,299,139 (-)NCBI
mRatBN7.2638,545,971 - 38,570,349 (-)NCBI
RefSeq Acc Id: XM_039112193   ⟹   XP_038968121
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8644,277,015 - 44,299,111 (-)NCBI
mRatBN7.2638,548,183 - 38,570,318 (-)NCBI
RefSeq Acc Id: XM_039112194   ⟹   XP_038968122
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8644,280,915 - 44,299,111 (-)NCBI
mRatBN7.2638,552,129 - 38,570,318 (-)NCBI
RefSeq Acc Id: NP_001101485   ⟸   NM_001108015
- UniProtKB: A0A8J8XB91 (UniProtKB/TrEMBL),   A6HAS1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000005774   ⟸   ENSRNOT00000005774
RefSeq Acc Id: XP_038968120   ⟸   XM_039112192
- Peptide Label: isoform X1
- UniProtKB: A0A8J8XB91 (UniProtKB/TrEMBL),   A6HAS1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968121   ⟸   XM_039112193
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038968122   ⟸   XM_039112194
- Peptide Label: isoform X2
Protein Domains
Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B5DF61-F1-model_v2 AlphaFold B5DF61 1-207 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1564451 AgrOrtholog
BioCyc Gene G2FUF-38080 BioCyc
Ensembl Genes ENSRNOG00000004110 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000005774 ENTREZGENE
  ENSRNOT00000005774.9 UniProtKB/TrEMBL
Gene3D-CATH Phosphorylase Kinase, domain 1 UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro Kinase-like_dom UniProtKB/TrEMBL
  Prot_kinase_cat_dom UniProtKB/TrEMBL
  Tribbles/Ser_Thr_kinase_40 UniProtKB/TrEMBL
KEGG Report rno:313974 UniProtKB/TrEMBL
NCBI Gene 313974 ENTREZGENE
PANTHER PTHR22961 UniProtKB/TrEMBL
  TRIBBLES HOMOLOG 2 UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/TrEMBL
PhenoGen Trib2 PhenoGen
PROSITE PROTEIN_KINASE_DOM UniProtKB/TrEMBL
RatGTEx ENSRNOG00000004110 RatGTEx
SMART S_TKc UniProtKB/TrEMBL
Superfamily-SCOP Kinase_like UniProtKB/TrEMBL
UniProt A0A8J8XB91 ENTREZGENE, UniProtKB/TrEMBL
  A6HAS1 ENTREZGENE, UniProtKB/TrEMBL
  B5DF61_RAT UniProtKB/TrEMBL
UniProt Secondary G3V6J6 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Trib2  tribbles pseudokinase 2  LOC108351208  uncharacterized LOC108351208  Data merged from RGD:11402704 737654 PROVISIONAL
2016-08-02 LOC108351208  uncharacterized LOC108351208      Symbol and Name status set to provisional 70820 PROVISIONAL
2015-07-29 Trib2  tribbles pseudokinase 2  LOC690207  hypothetical protein LOC690207  Data merged from RGD:1582901 737654 PROVISIONAL
2013-11-11 Trib2  tribbles pseudokinase 2  Trib2  tribbles homolog 2 (Drosophila)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-06 Trib2  tribbles homolog 2 (Drosophila)  RGD1564451_predicted  similar to Tribbles homolog 2 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-01-09 LOC690207  hypothetical protein LOC690207  LOC686423  hypothetical protein LOC686423  Data merged from RGD:1597661 1643240 APPROVED
2006-11-20 LOC686423  hypothetical protein LOC686423      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC690207  hypothetical protein LOC690207      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-03-07 RGD1564451_predicted  similar to Tribbles homolog 2 (predicted)  LOC313974  similar to Tribbles homolog 2  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC313974  similar to Tribbles homolog 2      Symbol and Name status set to provisional 70820 PROVISIONAL