Map4 (microtubule-associated protein 4) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Map4 (microtubule-associated protein 4) Rattus norvegicus
Analyze
Symbol: Map4
Name: microtubule-associated protein 4
RGD ID: 1564359
Description: Predicted to enable microtubule binding activity and microtubule stabilizing activity. Predicted to be involved in microtubule polymerization; negative regulation of non-motile cilium assembly; and plasma membrane bounded cell projection organization. Predicted to act upstream of or within cell division; microtubule cytoskeleton organization; and microtubule sliding. Located in axon. Orthologous to human MAP4 (microtubule associated protein 4); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC367171; MAP-4; Mtap4
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88118,800,393 - 118,942,805 (+)NCBIGRCr8
mRatBN7.28109,925,233 - 110,064,370 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8109,925,575 - 110,064,362 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.08118,013,584 - 118,159,934 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8118,013,612 - 118,159,933 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08117,366,074 - 117,515,388 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48114,300,908 - 114,438,008 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera8109,215,219 - 109,352,108 (+)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Map4RatKleine-Levin syndrome  ISOMAP4 (Homo sapiens)8554872ClinVar Annotator: match by term: Kleine-Levin syndromeClinVar 
Map4RatProgressive Microcephaly with Seizures and Cerebral and Cerebellar Atrophy  ISOMAP4 (Homo sapiens)8554872ClinVar Annotator: match by term: Microcephaly more ...ClinVarPMID:28492532
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Map4RatWeight Gain  ISOMAP4 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:19030233

1 to 20 of 145 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Map4Rat(1->4)-beta-D-glucan multiple interactionsISOMap4 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of MAP4 mRNACTDPMID:36331819
Map4Rat1,1-dichloroethene increases expressionISOMap4 (Mus musculus)6480464vinylidene chloride results in increased expression of MAP4 mRNACTDPMID:26682919
Map4Rat1,2-dimethylhydrazine decreases expressionISOMap4 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of MAP4 mRNACTDPMID:22206623
Map4Rat17alpha-ethynylestradiol affects expressionISOMap4 (Mus musculus)6480464Ethinyl Estradiol affects the expression of MAP4 mRNACTDPMID:17555576
Map4Rat17alpha-ethynylestradiol increases expressionISOMap4 (Mus musculus)6480464Ethinyl Estradiol results in increased expression of MAP4 mRNACTDPMID:17942748
Map4Rat17alpha-ethynylestradiol multiple interactionsISOMap4 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of MAP4 mRNACTDPMID:17942748
Map4Rat17beta-estradiol decreases expressionISOMap4 (Mus musculus)6480464Estradiol results in decreased expression of MAP4 mRNACTDPMID:39298647
Map4Rat2,2',4,4'-Tetrabromodiphenyl ether decreases expressionISOMAP4 (Homo sapiens)64804642 more ...CTDPMID:31675489
Map4Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOMap4 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of MAP4 mRNACTDPMID:17942748
Map4Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of MAP4 mRNACTDPMID:34747641
Map4Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOMap4 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of MAP4 mRNACTDPMID:21570461
Map4Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of MAP4 mRNACTDPMID:21215274 and PMID:33387578
Map4Rat2,4,6-tribromophenol decreases expressionISOMAP4 (Homo sapiens)64804642 more ...CTDPMID:31675489
Map4Rat2,6-dimethoxyphenol multiple interactionsISOMAP4 (Homo sapiens)6480464[pyrogallol 1 more ...CTDPMID:38598786
Map4Rat3,3',5,5'-tetrabromobisphenol A decreases expressionISOMAP4 (Homo sapiens)6480464tetrabromobisphenol A results in decreased expression of MAP4 proteinCTDPMID:31675489
Map4Rat3,4-methylenedioxymethamphetamine increases expressionISOMap4 (Mus musculus)6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of MAP4 mRNACTDPMID:20188158
Map4Rat3-isobutyl-1-methyl-7H-xanthine multiple interactionsISOMAP4 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in decreased expression of MAP4 mRNACTDPMID:28628672
Map4Rat6-propyl-2-thiouracil decreases expressionEXP 6480464Propylthiouracil results in decreased expression of MAP4 mRNACTDPMID:24780913
Map4Rat6-propyl-2-thiouracil increases expressionEXP 6480464Propylthiouracil results in increased expression of MAP4 mRNACTDPMID:30047161
Map4Ratacrylamide increases expressionEXP 6480464Acrylamide results in increased expression of MAP4 mRNACTDPMID:28959563

1 to 20 of 145 rows

Biological Process
1 to 14 of 14 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Map4Ratcell division acts_upstream_of_or_withinISOMAP4 (Homo sapiens)1624291 PMID:21822276RGDPMID:21822276
Map4Ratcilium disassembly involved_inISOMAP4 (Homo sapiens)1624291 PMID:34782749RGDPMID:34782749
Map4Ratestablishment of spindle orientation acts_upstream_of_or_withinISOMAP4 (Homo sapiens)1624291UniProtKB:Q7Z460 and PMID:21822276RGDPMID:21822276
Map4Ratestablishment of spindle orientation acts_upstream_of_or_withinISOMap4 (Mus musculus)1624291 PMID:21822276RGDPMID:21822276
Map4Ratmicrotubule cytoskeleton organization involved_inISOMAP4 (Homo sapiens)1624291 PMID:34782749RGDPMID:34782749
Map4Ratmicrotubule cytoskeleton organization involved_inIBAFB:FBgn0266579 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Map4Ratmicrotubule cytoskeleton organization involved_inISOMap4 (Mus musculus)1624291 PMID:10542369RGDPMID:10542369
Map4Ratmicrotubule polymerization involved_inISOMAP4 (Homo sapiens)1624291 PMID:10791892 and PMID:34782749RGDPMID:10791892 and PMID:34782749
Map4Ratmicrotubule sliding acts_upstream_of_or_withinISOMAP4 (Homo sapiens)1624291 PMID:21822276RGDPMID:21822276
Map4Ratmicrotubule sliding acts_upstream_of_or_withinISOMap4 (Mus musculus)1624291 PMID:21822276RGDPMID:21822276
Map4Ratmitotic spindle organization acts_upstream_of_or_withinISOMAP4 (Homo sapiens)1624291 PMID:21822276RGDPMID:21822276
Map4Ratmitotic spindle organization acts_upstream_of_or_withinISOMap4 (Mus musculus)1624291 PMID:21822276RGDPMID:21822276
Map4Ratnegative regulation of non-motile cilium assembly involved_inISOMAP4 (Homo sapiens)1624291 PMID:23572511RGDPMID:23572511
Map4Ratneuron projection development involved_inIBAFB:FBgn0266579 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
1 to 14 of 14 rows

Cellular Component
1 to 17 of 17 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Map4Rataxon located_inIDA 13514087PMID:28426968ARUK-UCL 
Map4Rataxoneme located_inISOMAP4 (Homo sapiens)1624291 PMID:23572511RGDPMID:23572511
Map4Ratciliary basal body located_inISOMAP4 (Homo sapiens) more ...1624291 RGDGO_REF:0000052
Map4Ratcilium located_inISOMAP4 (Homo sapiens) more ...1624291 RGDGO_REF:0000052
Map4Ratcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
Map4Ratcytoskeleton located_inIEAUniProtKB-KW:KW-02061600115GO_REF:0000043UniProtGO_REF:0000043
Map4Ratcytoskeleton located_inIEAUniProtKB-SubCell:SL-00901600115GO_REF:0000044UniProtGO_REF:0000044
Map4Ratcytosol located_inISOMAP4 (Homo sapiens) more ...1624291 RGDGO_REF:0000052
Map4Ratmicrotubule located_inIEAUniProtKB-KW:KW-04931600115GO_REF:0000043UniProtGO_REF:0000043
Map4Ratmicrotubule is_active_inISOMAP4 (Homo sapiens)1624291 PMID:34782749RGDPMID:34782749
Map4Ratmicrotubule cytoskeleton located_inISOMAP4 (Homo sapiens) more ...1624291 RGDGO_REF:0000052
Map4Ratmicrotubule organizing center located_inISOMAP4 (Homo sapiens)1624291 PMID:29180244RGDPMID:29180244
Map4Ratmicrotubule organizing center located_inIEAUniProtKB-SubCell:SL-04841600115GO_REF:0000044UniProtGO_REF:0000044
Map4Ratmitotic spindle located_inISOMAP4 (Homo sapiens)1624291 PMID:21822276RGDPMID:21822276
Map4Ratneuron projection is_active_inIBAFB:FBgn0266579 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Map4Ratplasma membrane located_inISOMAP4 (Homo sapiens) more ...1624291 RGDGO_REF:0000052
Map4Ratpostsynaptic density located_inISOMap4 (Mus musculus)1624291 PMID:17114649RGDPMID:17114649
1 to 17 of 17 rows

Molecular Function

  


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. MAP2 Defines a Pre-axonal Filtering Zone to Regulate KIF1- versus KIF5-Dependent Cargo Transport in Sensory Neurons. Gumy LF, etal., Neuron. 2017 Apr 19;94(2):347-362.e7. doi: 10.1016/j.neuron.2017.03.046.
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
PMID:10542369   PMID:17101137   PMID:17114649   PMID:21822276   PMID:22164227   PMID:22658674   PMID:22681889   PMID:23376485   PMID:23572511   PMID:25232678   PMID:29476059   PMID:30053369  



Map4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88118,800,393 - 118,942,805 (+)NCBIGRCr8
mRatBN7.28109,925,233 - 110,064,370 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8109,925,575 - 110,064,362 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.08118,013,584 - 118,159,934 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8118,013,612 - 118,159,933 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08117,366,074 - 117,515,388 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48114,300,908 - 114,438,008 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera8109,215,219 - 109,352,108 (+)NCBICelera
Cytogenetic Map8q32NCBI
MAP4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38347,850,695 - 48,088,848 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl347,850,690 - 48,089,272 (-)EnsemblGRCh38hg38GRCh38
GRCh37347,892,185 - 48,130,338 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36347,867,189 - 48,105,715 (-)NCBINCBI36Build 36hg18NCBI36
Build 34347,989,573 - 48,105,714NCBI
Celera347,842,039 - 48,079,819 (-)NCBICelera
Cytogenetic Map3p21.31NCBI
HuRef347,947,535 - 48,185,502 (-)NCBIHuRef
CHM1_1347,843,426 - 48,082,709 (-)NCBICHM1_1
T2T-CHM13v2.0347,878,026 - 48,116,148 (-)NCBIT2T-CHM13v2.0
Map4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399109,758,909 - 109,913,018 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9109,760,528 - 109,913,023 (+)EnsemblGRCm39 Ensembl
GRCm389109,929,841 - 110,083,954 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9109,931,460 - 110,083,955 (+)EnsemblGRCm38mm10GRCm38
MGSCv379109,834,278 - 109,986,451 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369109,776,634 - 109,929,123 (+)NCBIMGSCv36mm8
Celera9109,659,367 - 109,812,146 (+)NCBICelera
Cytogenetic Map9F2NCBI
cM Map959.83NCBI
Map4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542024,437,492 - 24,537,410 (+)NCBIChiLan1.0ChiLan1.0
MAP4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2247,819,173 - 48,048,378 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1347,823,941 - 48,053,146 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0347,763,379 - 47,995,457 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1348,858,544 - 49,084,639 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl348,858,544 - 49,020,950 (-)Ensemblpanpan1.1panPan2
MAP4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12040,896,920 - 41,101,626 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2040,896,772 - 41,100,001 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2040,814,029 - 41,018,606 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02041,382,542 - 41,585,188 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2041,382,542 - 41,585,185 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12040,622,626 - 40,827,269 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02041,023,665 - 41,228,690 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02041,304,251 - 41,508,363 (+)NCBIUU_Cfam_GSD_1.0
Map4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118201,906,566 - 201,996,886 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365961,455,705 - 1,546,007 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAP4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1330,633,054 - 30,804,761 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11330,633,049 - 30,805,183 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21333,909,389 - 34,078,909 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MAP4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1229,239,983 - 9,461,438 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl229,242,309 - 9,394,713 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041157,644,131 - 157,867,070 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Map4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473073,490,974 - 73,656,097 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Map4
629 total Variants

Predicted Target Of
Summary Value
Count of predictions:495
Count of miRNA genes:254
Interacting mature miRNAs:335
Transcripts:ENSRNOT00000056166
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 22 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)861290298119084929Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)873473045118473045Rat
631210Bw3Body weight QTL35.9mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)869349194112783834Rat
1358903Bp252Blood pressure QTL 25270.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)893965141123900184Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)840952565123900184Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)871888757116888757Rat
8694446Bw170Body weight QTL 17012.070.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)871888757116888757Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)810378157112202585Rat
631653Bp125Blood pressure QTL 1253.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)866142385111142385Rat
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)88462195110921472Rat

1 to 10 of 22 rows
D8Rat10  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr88118,871,671 - 118,871,856 (+)Marker Load Pipeline
Rnor_6.08118,087,517 - 118,087,701NCBIRnor6.0
Rnor_5.08117,431,943 - 117,432,127UniSTSRnor5.0
Celera8109,281,056 - 109,281,240UniSTS
RH 3.4 Map81113.69RGD
RH 3.4 Map81113.69UniSTS
SHRSP x BN Map871.8999RGD
SHRSP x BN Map871.8999UniSTS
Cytogenetic Map8q32UniSTS
RH129898  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28109,996,887 - 109,997,101 (+)MAPPERmRatBN7.2
Rnor_6.08118,091,152 - 118,091,365NCBIRnor6.0
Rnor_5.08117,435,578 - 117,435,791UniSTSRnor5.0
Celera8109,284,691 - 109,284,904UniSTS
RH 3.4 Map81113.39UniSTS
Cytogenetic Map8q32UniSTS
RH134553  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28110,063,309 - 110,063,505 (+)MAPPERmRatBN7.2
Rnor_6.08118,158,874 - 118,159,069NCBIRnor6.0
Rnor_5.08117,514,328 - 117,514,523UniSTSRnor5.0
RGSC_v3.48114,436,948 - 114,437,143UniSTSRGSC3.4
Celera8109,351,048 - 109,351,243UniSTS
Cytogenetic Map8q32UniSTS
RH144399  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28110,036,844 - 110,037,091 (+)MAPPERmRatBN7.2
Rnor_6.08118,132,409 - 118,132,655NCBIRnor6.0
Rnor_5.08117,487,508 - 117,487,754UniSTSRnor5.0
Rnor_5.08117,476,567 - 117,476,813UniSTSRnor5.0
RGSC_v3.48114,410,389 - 114,410,635UniSTSRGSC3.4
Celera8109,324,646 - 109,324,892UniSTS
RH 3.4 Map81113.99UniSTS
Cytogenetic Map8q32UniSTS
AW521311  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28109,996,843 - 109,996,973 (+)MAPPERmRatBN7.2
Rnor_6.08118,091,108 - 118,091,237NCBIRnor6.0
Rnor_5.08117,435,534 - 117,435,663UniSTSRnor5.0
Celera8109,284,647 - 109,284,776UniSTS
RH 3.4 Map81113.99UniSTS
Cytogenetic Map8q32UniSTS
PMC317076P1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28109,925,102 - 109,925,609 (+)MAPPERmRatBN7.2
Rnor_6.08118,013,095 - 118,013,601NCBIRnor6.0
Rnor_5.08117,365,562 - 117,366,068UniSTSRnor5.0
RGSC_v3.48114,300,391 - 114,300,897UniSTSRGSC3.4
Celera8109,214,702 - 109,215,208UniSTS
Cytogenetic Map8q32UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31


1 to 30 of 56 rows
RefSeq Transcripts NM_001024278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001419953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001419954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082632 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 56 rows

Ensembl Acc Id: ENSRNOT00000056161   ⟹   ENSRNOP00000069786
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8109,973,868 - 110,062,787 (+)Ensembl
Rnor_6.0 Ensembl8118,066,988 - 118,158,032 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000056166   ⟹   ENSRNOP00000053011
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8109,925,575 - 110,063,619 (+)Ensembl
Rnor_6.0 Ensembl8118,013,612 - 118,159,933 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000097713   ⟹   ENSRNOP00000091971
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8109,925,575 - 110,062,059 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000098378   ⟹   ENSRNOP00000095245
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8110,034,419 - 110,064,362 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000099144   ⟹   ENSRNOP00000081853
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8109,973,868 - 110,062,787 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000105433   ⟹   ENSRNOP00000080376
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8109,973,868 - 110,062,787 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000109752   ⟹   ENSRNOP00000095817
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8109,973,921 - 110,063,620 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000110699   ⟹   ENSRNOP00000096077
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8109,925,575 - 110,062,059 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000117109   ⟹   ENSRNOP00000081325
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8110,034,419 - 110,064,362 (+)Ensembl
RefSeq Acc Id: NM_001024278   ⟹   NP_001019449
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,804,066 - 118,942,805 (+)NCBI
mRatBN7.28109,925,610 - 110,064,370 (+)NCBI
RefSeq Acc Id: NM_001419953   ⟹   NP_001406882
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,804,066 - 118,942,805 (+)NCBI
mRatBN7.28109,925,610 - 110,064,370 (+)NCBI
RefSeq Acc Id: NM_001419954   ⟹   NP_001406883
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,804,066 - 118,942,805 (+)NCBI
mRatBN7.28109,925,610 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_006243813   ⟹   XP_006243875
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,236 - 110,064,370 (+)NCBI
Rnor_6.08118,013,586 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243814   ⟹   XP_006243876
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,237 - 110,064,370 (+)NCBI
Rnor_6.08118,013,586 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243815   ⟹   XP_006243877
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,236 - 110,064,370 (+)NCBI
Rnor_6.08118,013,586 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243816   ⟹   XP_006243878
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,237 - 110,064,370 (+)NCBI
Rnor_6.08118,013,586 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243818   ⟹   XP_006243880
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,235 - 110,064,370 (+)NCBI
Rnor_6.08118,013,585 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243819   ⟹   XP_006243881
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,235 - 110,064,370 (+)NCBI
Rnor_6.08118,013,585 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243820   ⟹   XP_006243882
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,234 - 110,064,370 (+)NCBI
Rnor_6.08118,013,584 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243821   ⟹   XP_006243883
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,251 - 110,064,370 (+)NCBI
Rnor_6.08118,013,601 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243823   ⟹   XP_006243885
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,252 - 110,064,370 (+)NCBI
Rnor_6.08118,013,601 - 118,159,931 (+)NCBI
Rnor_5.08117,366,074 - 117,515,388 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017595795   ⟹   XP_017451284
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,235 - 110,064,370 (+)NCBI
Rnor_6.08118,013,586 - 118,159,931 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017595796   ⟹   XP_017451285
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,942 - 118,942,805 (+)NCBI
mRatBN7.28110,028,899 - 110,064,370 (+)NCBI
Rnor_6.08118,128,727 - 118,159,931 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017595797   ⟹   XP_017451286
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,941 - 118,942,805 (+)NCBI
mRatBN7.28110,028,898 - 110,064,370 (+)NCBI
Rnor_6.08118,128,726 - 118,159,931 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039082631   ⟹   XP_038938559
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,236 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_039082632   ⟹   XP_038938560
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,236 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_039082633   ⟹   XP_038938561
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,235 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_039082634   ⟹   XP_038938562
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,233 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_039082635   ⟹   XP_038938563
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,234 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_039082636   ⟹   XP_038938564
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,234 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_039082639   ⟹   XP_038938567
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
mRatBN7.28109,925,249 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_039082640   ⟹   XP_038938568
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,937 - 118,942,805 (+)NCBI
mRatBN7.28110,028,897 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_039082641   ⟹   XP_038938569
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,920 - 118,942,805 (+)NCBI
mRatBN7.28110,028,887 - 110,064,370 (+)NCBI
RefSeq Acc Id: XM_063265908   ⟹   XP_063121978
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265909   ⟹   XP_063121979
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265910   ⟹   XP_063121980
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265911   ⟹   XP_063121981
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265912   ⟹   XP_063121982
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265914   ⟹   XP_063121984
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265915   ⟹   XP_063121985
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265916   ⟹   XP_063121986
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265917   ⟹   XP_063121987
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265918   ⟹   XP_063121988
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265920   ⟹   XP_063121990
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265921   ⟹   XP_063121991
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265922   ⟹   XP_063121992
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265923   ⟹   XP_063121993
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,800,393 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265924   ⟹   XP_063121994
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,946 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265925   ⟹   XP_063121995
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,947 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265926   ⟹   XP_063121996
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,943 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265928   ⟹   XP_063121998
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,942 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265929   ⟹   XP_063121999
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,929 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265930   ⟹   XP_063122000
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,921 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265931   ⟹   XP_063122001
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,930 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265932   ⟹   XP_063122002
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,913 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265933   ⟹   XP_063122003
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,924 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265934   ⟹   XP_063122004
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,925 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265935   ⟹   XP_063122005
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,911 - 118,942,805 (+)NCBI
RefSeq Acc Id: XM_063265937   ⟹   XP_063122007
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,904,912 - 118,942,805 (+)NCBI
1 to 30 of 63 rows
Protein RefSeqs NP_001019449 (Get FASTA)   NCBI Sequence Viewer  
  NP_001406882 (Get FASTA)   NCBI Sequence Viewer  
  NP_001406883 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243875 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243876 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243877 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243878 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243880 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243881 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243882 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243883 (Get FASTA)   NCBI Sequence Viewer  
  XP_006243885 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451284 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451285 (Get FASTA)   NCBI Sequence Viewer  
  XP_017451286 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938559 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938560 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938561 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938562 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938563 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938564 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938567 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938568 (Get FASTA)   NCBI Sequence Viewer  
  XP_038938569 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121978 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121979 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121980 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121981 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121982 (Get FASTA)   NCBI Sequence Viewer  
  XP_063121984 (Get FASTA)   NCBI Sequence Viewer  
1 to 30 of 63 rows
1 to 5 of 59 rows
1 to 5 of 59 rows
RefSeq Acc Id: XP_006243875   ⟸   XM_006243813
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243877   ⟸   XM_006243815
- Peptide Label: isoform X3
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243876   ⟸   XM_006243814
- Peptide Label: isoform X2
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243878   ⟸   XM_006243816
- Peptide Label: isoform X4
- UniProtKB: A0A0G2JW88 (UniProtKB/TrEMBL),   A0A8I6ART8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243880   ⟸   XM_006243818
- Peptide Label: isoform X6
- UniProtKB: A0A8I6ART8 (UniProtKB/TrEMBL)
- Sequence:

Name Modeler Protein Id AA Range Protein Structure
AF-Q5M7W5-F1-model_v2 AlphaFold Q5M7W5 1-1057 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13696325
Promoter ID:EPDNEW_R6849
Type:initiation region
Name:Map4_1
Description:microtubule-associated protein 4
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.08118,013,602 - 118,013,662EPDNEW


1 to 38 of 38 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-29083 BioCyc
Ensembl Genes ENSRNOG00000020748 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000056161 ENTREZGENE
  ENSRNOT00000056166 ENTREZGENE
  ENSRNOT00000098378 ENTREZGENE
  ENSRNOT00000099144 ENTREZGENE
  ENSRNOT00000105433 ENTREZGENE
  ENSRNOT00000109752 ENTREZGENE
  ENSRNOT00000110699 ENTREZGENE
  ENSRNOT00000117109 ENTREZGENE
IMAGE_CLONE IMAGE:7110394 IMAGE-MGC_LOAD
InterPro MAP2/MAP4/Tau UniProtKB/Swiss-Prot
  MAP_tubulin-bd_rpt UniProtKB/Swiss-Prot
KEGG Report rno:367171 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93812 IMAGE-MGC_LOAD
NCBI Gene 367171 ENTREZGENE
PANTHER MICROTUBULE-ASSOCIATED PROTEIN UniProtKB/Swiss-Prot
  PTHR11501:SF16 UniProtKB/Swiss-Prot
Pfam Tubulin-binding UniProtKB/Swiss-Prot
PhenoGen Map4 PhenoGen
PROSITE TAU_MAP_1 UniProtKB/Swiss-Prot
  TAU_MAP_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000020748 RatGTEx
UniProt A0A0G2JW88 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZRQ1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZSY4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZTS3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AEN3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AKJ8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AL32 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ART8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8L2QPR2 ENTREZGENE, UniProtKB/TrEMBL
  A6I3D0 ENTREZGENE, UniProtKB/TrEMBL
  MAP4_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q75NR5 ENTREZGENE
  Q75NR6 ENTREZGENE
UniProt Secondary Q75NR5 UniProtKB/Swiss-Prot
  Q75NR6 UniProtKB/Swiss-Prot
1 to 38 of 38 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-08-29 Map4  microtubule-associated protein 4  Mtap4  microtubule-associated protein 4  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-05 Mtap4  microtubule-associated protein 4  LOC367171  microtubule-associated protein 4  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-02-09 LOC367171  microtubule-associated protein 4      Symbol and Name status set to provisional 70820 PROVISIONAL