Wdcp (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 6 | 33,570,145 - 33,584,985 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 6 | 33,566,988 - 33,585,247 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 6 | 27,850,684 - 27,865,540 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 27,850,698 - 27,865,536 (+) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 6 | 28,142,945 - 28,157,792 (+) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 28,458,847 - 28,473,691 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 27,933,402 - 27,948,244 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 29,954,639 - 29,975,758 (-) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 29,957,568 - 29,975,730 (-) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 39,910,539 - 39,931,060 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 6 | 28,154,382 - 28,163,659 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 6 | 27,320,374 - 27,334,250 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | q14 | NCBI | | | | |
|
WDCP (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 2 | 24,029,347 - 24,047,391 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 24,029,347 - 24,049,575 (-) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 2 | 24,252,217 - 24,270,261 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 24,105,747 - 24,123,727 (-) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Celera | 2 | 24,092,585 - 24,110,627 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | p23.3 | NCBI | | | | | HuRef | 2 | 23,991,117 - 24,009,159 (-) | NCBI | | HuRef | | | CHM1_1 | 2 | 24,181,598 - 24,199,686 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 24,064,045 - 24,082,083 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Wdcp (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 12 | 4,892,384 - 4,910,049 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 12 | 4,893,303 - 4,910,043 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 12 | 4,842,351 - 4,860,049 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 12 | 4,843,303 - 4,860,043 (+) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 12 | 4,850,109 - 4,863,780 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 12 | 4,865,797 - 4,874,985 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 12 | 4,774,708 - 4,788,379 (+) | NCBI | | Celera | | | Cytogenetic Map | 12 | A1.1 | NCBI | | | | | cM Map | 12 | 2.1 | NCBI | | | | |
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Wdcp (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955469 | 6,233,341 - 6,262,965 (-) | Ensembl | | | | | ChiLan1.0 | NW_004955469 | 6,236,653 - 6,261,753 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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WDCP (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 12 | 102,469,697 - 102,488,600 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2A | 102,473,689 - 102,492,570 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2A | 24,027,916 - 24,045,800 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2A | 24,125,803 - 24,143,591 (-) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2A | 24,127,392 - 24,135,975 (-) | Ensembl | | | panPan2 | panpan1.1 |
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WDCP (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 17 | 18,512,646 - 18,533,978 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 17 | 18,514,385 - 18,533,848 (-) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 17 | 18,411,452 - 18,433,030 (-) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 17 | 18,788,605 - 18,808,342 (-) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 17 | 18,684,744 - 18,807,451 (-) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 17 | 18,523,953 - 18,545,541 (-) | NCBI | | UMICH_Zoey_3.1 | | | UU_Cfam_GSD_1.0 | 17 | 18,573,864 - 18,595,465 (-) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Wdcp (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024406292 | 62,883,732 - 62,911,104 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936493 | 7,928,451 - 7,948,044 (+) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936493 | 7,928,493 - 7,947,683 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
WDCP (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 3 | 114,636,283 - 114,652,991 (+) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 3 | 114,636,257 - 114,652,993 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 3 | 121,901,044 - 121,917,777 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
WDCP (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 14 | 83,621,721 - 83,638,564 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 14 | 83,622,586 - 83,639,435 (+) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666045 | 28,524,793 - 28,543,963 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Wdcp (Heterocephalus glaber - naked mole-rat) |
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Wdcp (Rattus rattus - black rat) |
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