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Gene: Cabp2 (calcium binding protein 2) Rattus norvegicus

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Symbol:

Cabp2

Name:

calcium binding protein 2

RGD ID:

1563670

Description:

Predicted to enable calcium channel regulator activity. Predicted to be involved in sensory perception of sound and visual perception. Predicted to be located in Golgi apparatus and plasma membrane. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 93. Orthologous to human CABP2 (calcium binding protein 2); PARTICIPATES IN calcium/calcium-mediated signaling pathway; INTERACTS WITH 1-naphthyl isothiocyanate; bisphenol A; cyclophosphamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

calcium-binding protein 2; LOC499298; RGD1563670; similar to L-CaBP2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CABP2 (calcium binding protein 2)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Cabp2 (calcium binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cabp2 (calcium binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CABP2 (calcium binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CABP2 (calcium binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cabp2 (calcium binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CABP2 (calcium binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CABP2 (calcium binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cabp2 (calcium binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Cabp2 (calcium binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	PRKCA (protein kinase C alpha)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	CABP2 (calcium binding protein 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Cabp2 (calcium binding protein 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	cabp2b (calcium binding protein 2b)	Alliance	DIOPT (Hieranoid\|OMA\|OrthoFinder\|PANTHER)
Danio rerio (zebrafish):	cabp2b (calcium binding protein 2b)	Alliance	DIOPT (Hieranoid\|OrthoFinder\|PANTHER)
Danio rerio (zebrafish):	cabp2a (calcium binding protein 2a)	Alliance	DIOPT (Hieranoid\|OMA\|OrthoFinder\|PANTHER)
Caenorhabditis elegans (roundworm):	cal-5	Alliance	DIOPT (Ensembl Compara\|OMA)
Xenopus tropicalis (tropical clawed frog):	cabp2	Alliance	DIOPT (Hieranoid\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	210,804,111 - 210,809,941 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	210,804,096 - 210,809,940 (+)	Ensembl				GRCr8
mRatBN7.2	1	201,374,649 - 201,380,469 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	201,375,276 - 201,380,469 (+)	Ensembl				mRatBN7.2
Rnor_6.0	1	219,329,186 - 219,335,046 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	219,329,574 - 219,335,043 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	226,198,752 - 226,205,697 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	206,665,715 - 206,670,392 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	198,919,137 - 198,924,997 (+)	NCBI		Celera
Cytogenetic Map	1	q43	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

autosomal recessive nonsyndromic deafness (ISO)

autosomal recessive nonsyndromic deafness 93 (ISO,ISS)

genetic disease (ISO)

Hearing Loss (ISO)

nonsyndromic deafness (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1-naphthyl isothiocyanate (EXP)

17beta-estradiol (ISO)

4,4'-sulfonyldiphenol (ISO)

aspartame (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

cyclophosphamide (EXP)

endosulfan (EXP)

monosodium L-glutamate (ISO)

paracetamol (ISO)

pirinixic acid (ISO)

rotenone (ISO)

tetrachloromethane (EXP)

thioacetamide (EXP)

titanium dioxide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

phototransduction (IBA)

sensory perception of sound (IBA,ISO)

visual perception (IBA,ISO)

Cellular Component

Golgi apparatus (IEA,ISO)

plasma membrane (IBA,IEA,ISO)

Molecular Function

calcium channel regulator activity (IBA,ISO)

calcium ion binding (IEA)

metal ion binding (IEA)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

calcium/calcium-mediated signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	The diversity of calcium sensor proteins in the regulation of neuronal function.	McCue HV, etal., Cold Spring Harb Perspect Biol. 2010 Aug;2(8):a004085. doi: 10.1101/cshperspect.a004085. Epub 2010 Jul 28.
3.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:19338761	PMID:27822497	PMID:28183797

Genomics

Comparative Map Data

Cabp2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	210,804,111 - 210,809,941 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	210,804,096 - 210,809,940 (+)	Ensembl				GRCr8
mRatBN7.2	1	201,374,649 - 201,380,469 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	201,375,276 - 201,380,469 (+)	Ensembl				mRatBN7.2
Rnor_6.0	1	219,329,186 - 219,335,046 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	219,329,574 - 219,335,043 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	226,198,752 - 226,205,697 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	206,665,715 - 206,670,392 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	198,919,137 - 198,924,997 (+)	NCBI		Celera
Cytogenetic Map	1	q43	NCBI

CABP2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	67,518,912 - 67,523,446 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	67,518,912 - 67,524,517 (-)	Ensembl			hg38	GRCh38
GRCh37	11	67,286,383 - 67,290,917 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	67,042,994 - 67,047,475 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	11	67,042,993 - 67,047,443	NCBI
Celera	11	64,620,821 - 64,625,302 (-)	NCBI		Celera
Cytogenetic Map	11	q13.2	NCBI
HuRef	11	63,615,628 - 63,620,109 (-)	NCBI		HuRef
CHM1_1	11	67,169,473 - 67,173,954 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	67,513,590 - 67,518,124 (-)	NCBI		T2T-CHM13v2.0

Cabp2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	4,131,469 - 4,137,340 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	4,131,578 - 4,137,340 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	19	4,081,469 - 4,087,340 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	4,081,578 - 4,087,340 (+)	Ensembl			mm10	GRCm38
MGSCv37	19	4,082,488 - 4,087,340 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	19	4,083,490 - 4,087,340 (+)	NCBI		MGSCv36	mm8
Celera	19	3,953,502 - 3,958,354 (+)	NCBI		Celera
Cytogenetic Map	19	A	NCBI
cM Map	19	3.79	NCBI

Cabp2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	17,967,313 - 17,972,468 (+)	Ensembl
ChiLan1.0	NW_004955422	17,967,313 - 17,972,468 (+)	NCBI	ChiLan1.0	ChiLan1.0

CABP2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	68,746,465 - 68,751,006 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	69,789,050 - 69,793,592 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	62,877,978 - 62,882,653 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	66,189,323 - 66,193,993 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2

CABP2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	49,960,656 - 49,963,889 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	49,959,544 - 49,964,268 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	48,571,195 - 48,574,807 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	50,882,846 - 50,886,458 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	50,881,853 - 50,886,458 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	50,096,161 - 50,099,774 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	49,670,916 - 49,674,529 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	50,464,914 - 50,468,526 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Cabp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	5,803,613 - 5,808,614 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936599	2,246,177 - 2,250,865 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936599	2,246,139 - 2,250,963 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CABP2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	5,014,810 - 5,020,775 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	2	5,014,888 - 5,020,705 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	3,733,523 - 3,739,224 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CABP2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	6,741,202 - 6,744,931 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666038	104,018,796 - 104,023,454 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cabp2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624767	19,016,945 - 19,022,328 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624767	19,016,945 - 19,022,328 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Cabp2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	3,555,308 - 3,561,059 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Cabp2
77 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	304
Count of miRNA genes:	144
Interacting mature miRNAs:	156
Transcripts:	ENSRNOT00000024770, ENSRNOT00000047618, ENSRNOT00000071109
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578778	Pur4	Proteinuria QTL 4	3.3	0.003	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	1	160111531	262090437	Rat
1354646	Kidm18	Kidney mass QTL 18	5.7		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	160573753	266453731	Rat
1357335	Bw39	Body weight QTL 39	3.3		body mass (VT:0001259)	body weight (CMO:0000012)	1	207243873	252243873	Rat
1354652	Kidm20	Kidney mass QTL 20	4.3		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	186658830	266453731	Rat
1354653	Despr9	Despair related QTL 9		0.00019	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	1	177339686	222339686	Rat
2293673	Bss27	Bone structure and strength QTL 27	18.63	0.0001	femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	1	181059071	226059071	Rat
2293677	Bss41	Bone structure and strength QTL 41	9.38	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra cross-sectional area (CMO:0001689)	1	181059071	226059071	Rat
1549830	Bss1	Bone structure and strength QTL 1	4.8		femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	1	182039247	227039247	Rat
70163	Bw20	Body weight QTL 20	5.1		body mass (VT:0001259)	body weight (CMO:0000012)	1	183564652	228564652	Rat
1600395	Niddm69	Non-insulin dependent diabetes mellitus QTL 69	4.14	0.0002	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	1	205233991	267096252	Rat
1600396	Niddm68	Non-insulin dependent diabetes mellitus QTL 68	4.97	0.0003	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	205233991	267096252	Rat
1354624	Cm35	Cardiac mass QTL35	5.7		heart left ventricle mass (VT:0007031)	calculated heart weight (CMO:0000073)	1	186658830	266453731	Rat
1600397	Edcs4	Endometrial carcinoma susceptibility QTL 4	2.2		uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	1	176288899	270518180	Rat
631838	Niddm36	Non-insulin dependent diabetes mellitus QTL 36		0.01	insulin secretion trait (VT:0003564)	calculated pancreatic islet insulin release measurement (CMO:0001217)	1	193964073	238964073	Rat
1549837	Hcar15	Hepatocarcinoma resistance QTL 15		0.05	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	162548015	270518180	Rat
2293689	Bss47	Bone structure and strength QTL 47	7.25	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra trabecular cross-sectional area (CMO:0001692)	1	181059071	226059071	Rat
1600388	Niddm67	Non-insulin dependent diabetes mellitus QTL 67	5.84	0.000004	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	205233991	267096252	Rat
152025235	Bw194	Body weight QTL 194	4.86		body mass (VT:0001259)		1	132966869	252856240	Rat
1598853	Memor3	Memory QTL 3	4.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	1	152919152	268496042	Rat
61341	Bp26	Blood pressure QTL 26			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	139442053	223964440	Rat
2293693	Bss22	Bone structure and strength QTL 22	33.52	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	1	181059071	226059071	Rat
1578759	Uae30	Urinary albumin excretion QTL 30	3.3	0.003	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	160111531	262090437	Rat
2300161	Bmd43	Bone mineral density QTL 43	8.4	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	1	181059071	226059071	Rat
1300145	Rf7	Renal function QTL 7	2.96		urine creatinine amount (VT:0010540)	urine creatinine level (CMO:0000125)	1	194575422	239575422	Rat
1358902	Bw47	Body weight QTL 47	1.67		body mass (VT:0001259)	body weight (CMO:0000012)	1	99645382	221502378	Rat
61347	Bp197	Blood pressure QTL 197	4.2		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	1	168063662	213063662	Rat
8655655	Arrd2	Age-related retinal degeneration QTL 2	7.79		retinal layer morphology trait (VT:0003727)	percentage of study population developing retinopathy during a period of time (CMO:0002453)	1	193400541	238400541	Rat
1358898	Bp255	Blood pressure QTL 255	3.6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	200449456	256003563	Rat
631214	Bw61	Body weight QTL61	3.4	0.0001	intramuscular adipose amount (VT:0010044)	intramuscular fat area (CMO:0001162)	1	182535316	227535316	Rat
7771612	Cm80	Cardiac mass QTL 80	8.4		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	1	146080545	243492863	Rat
731168	Bp154	Blood pressure QTL 154	3.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	103779152	223964440	Rat
731175	Uae20	Urinary albumin excretion QTL 20	3.5	0.0018	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	207163993	269633915	Rat
2300174	Bmd42	Bone mineral density QTL 42	8.4	0.0001	lumbar vertebra mineral mass (VT:0010511)	bone mineral density (CMO:0001226)	1	181059071	226059071	Rat
737828	Hcas3	Hepatocarcinoma susceptibility QTL 3	4.9		liver integrity trait (VT:0010547)	liver tumorous lesion volume to total liver volume ratio (CMO:0001082)	1	153679879	232414077	Rat
1354661	Bw33	Body weight QTL 33	5.2		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	266453731	Rat
1358886	Bp260	Blood pressure QTL 260	3.67		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	160574007	235238518	Rat
2293654	Bss30	Bone structure and strength QTL 30	32.65	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	1	181059071	226059071	Rat
1298084	Thym4	Thymus enlargement QTL 4	10.68		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	1	207243873	252243873	Rat
724531	Uae5	Urinary albumin excretion QTL 5	4		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	1	160111426	262090599	Rat
2300187	Bmd41	Bone mineral density QTL 41	8.9	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	1	181059071	226059071	Rat
2314011	Gluco56	Glucose level QTL 56			blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	209203273	254203273	Rat
8552891	Epfw5	Epididymal fat weight QTL 5	4.4		epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	1	202543537	247543537	Rat
1354580	Scort1	Serum corticosterone level QTL 1	3.4		blood corticosterone amount (VT:0005345)	blood corticosterone level (CMO:0001172)	1	154961463	266453731	Rat
634313	Niddm43	Non-insulin dependent diabetes mellitus QTL 43			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	208479811	269633915	Rat
1358292	Cm37	Cardiac mass QTL 37	6.2	8e-07	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	1	205674651	250674651	Rat
61376	Bp42	Blood pressure QTL 42	23.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	207243873	252243873	Rat
634312	Bp143	Blood pressure QTL 143	3	0.0002	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	203300512	229359342	Rat
1358294	Bw37	Body weight QTL 37	5	0.000011	body mass (VT:0001259)	body weight (CMO:0000012)	1	180739993	225739993	Rat
724559	Pancm1	Pancreatic morphology QTL 1	7.1		islet of Langerhans morphology trait (VT:0005215)	pancreatic islet damage composite score (CMO:0001156)	1	191190115	223964326	Rat
2312420	Pur17	Proteinuria QTL 17	7.1	0.0001	urine protein amount (VT:0005160)	urine total protein excretion rate (CMO:0000756)	1	172718770	228180370	Rat
10059600	Bp378	Blood pressure QTL 378	3.08	0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	186298393	231298393	Rat
2312564	Glom18	Glomerulus QTL 18	2.4	0.003	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	1	194786607	262083703	Rat
2292218	Kidm35	Kidney mass QTL 35			kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	1	208798288	253798288	Rat
634321	Hc1	Hypercalciuria QTL 1	2.91		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	1	188241285	250779312	Rat
724562	Rends1	Renal damage susceptibility QTL 1		0.05	kidney glomerulus integrity trait (VT:0010546)	index of glomerular damage (CMO:0001135)	1	139442053	223964440	Rat
1300168	Bp170	Blood pressure QTL 170	2.76		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	192995199	237995199	Rat
61403	Niddm4	Non-insulin dependent diabetes mellitus QTL 4			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	201464383	246464383	Rat
2292222	Bp307	Blood pressure QTL 307	3.06	0.0014	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	186298393	231298393	Rat
2292220	Bp306	Blood pressure QTL 306	3.47	0.00087	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	186298393	231298393	Rat
1641926	Teswt2	Testicular weight QTL 2	2.82		testis mass (VT:1000644)	both testes wet weight (CMO:0000175)	1	203675682	248675682	Rat
631658	Cm7	Cardiac mass QTL 7	5.32	0.0001	aorta mass (VT:0002845)	aorta weight (CMO:0000076)	1	205674651	250674651	Rat
1600380	Niddm70	Non-insulin dependent diabetes mellitus QTL 70	3.1	0.0008	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	1	185979875	230979875	Rat
1582206	Kidm33	Kidney mass QTL 33	6.9		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	1	197807365	233480676	Rat
1354610	Bw34	Body weight QTL 34	4.1		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	266453731	Rat
634338	Hcar4	Hepatocarcinoma resistance QTL 4	4.6		liver integrity trait (VT:0010547)	liver tumorous lesion number to liver area ratio (CMO:0001210)	1	202851915	223964440	Rat
8655855	Arrd3	Age-related retinal degeneration QTL 3	3.07		lens clarity trait (VT:0001304)	cataract incidence/prevalence measurement (CMO:0001585)	1	193400541	238400541	Rat
6480783	Insul19	Insulin level QTL 19	4.33		blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	1	203300512	213659238	Rat
1600374	Mcs17	Mammary carcinoma susceptibility QTL 17	3		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	1	207099883	252099883	Rat
6903303	Scl34	Serum cholesterol QTL 34	2.5	0.0033	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	173363824	227535316	Rat
2293083	Iddm25	Insulin dependent diabetes mellitus QTL 25	4.18		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	191260175	236260175	Rat
1354606	Bp246	Blood pressure QTL 246	3.6		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	1	111949780	228180370	Rat
738032	Hcas5	Hepatocarcinoma susceptibility QTL 5	3.12		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	185857683	270518180	Rat
2325727	Pia41	Pristane induced arthritis QTL 41			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	1	188241285	233241285	Rat

Markers in Region

RH132915

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	201,380,262 - 201,380,447 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	219,334,836 - 219,335,020	NCBI	Rnor6.0
Rnor_5.0	1	226,205,487 - 226,205,671	UniSTS	Rnor5.0
RGSC_v3.4	1	206,670,225 - 206,670,409	UniSTS	RGSC3.4
Celera	1	198,924,787 - 198,924,971	UniSTS
RH 3.4 Map	1	1558.8	UniSTS
Cytogenetic Map	1	q42	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
15	8	11	91	88	84	59	46	59	6	224	80	1	79	65	45	25	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001432464	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432465	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432467	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432468	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001070324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006223600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006230924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008760190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008774754	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017590276	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017604254	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039101317	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_574595	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473953	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000071109 ⟹ ENSRNOP00000065316

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	210,806,404 - 210,809,940 (+)	Ensembl
mRatBN7.2 Ensembl	1	201,375,276 - 201,380,469 (+)	Ensembl
Rnor_6.0 Ensembl	1	219,329,574 - 219,335,043 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096614 ⟹ ENSRNOP00000086114

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	210,806,098 - 210,809,940 (+)	Ensembl
mRatBN7.2 Ensembl	1	201,376,630 - 201,380,469 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102246 ⟹ ENSRNOP00000082564

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	210,804,096 - 210,809,940 (+)	Ensembl
mRatBN7.2 Ensembl	1	201,376,630 - 201,380,469 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000143709 ⟹ ENSRNOP00000102604

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	210,805,653 - 210,809,936 (+)	Ensembl

RefSeq Acc Id:

XM_006230924 ⟹ XP_006230986

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	210,804,111 - 210,809,941 (+)	NCBI
mRatBN7.2	1	201,374,649 - 201,380,469 (+)	NCBI
Rnor_6.0	1	219,329,186 - 219,335,046 (+)	NCBI
Rnor_5.0	1	226,198,752 - 226,205,697 (+)	NCBI

Sequence:

show sequence

GCACGCTGGTCACTGAGTCGATGGTAGTCACTAGCTCAGATGGCAGGCATGGCATGCATGGGAT
CTTGTTCCCTGAGACAAAGGCTGATGCAGAGGGCATGTGAATAAATCATGAGGGGCCCACAGCA
GGCCAGCAGGCCATAGCTGACCTCATTCTGGAAGTGAGAGTAAGCAGCTGCGTGGTTGAGGAGA
CCCAGCTGGGACAGAAAAGGTACCACGCCTATACCCATGGCCCTACCCGAGGGCCCAGCAGATG
GCAGCCTCCCTGAAGGGGACTCCAGTCCATCCACAGGCACCGCAGGACCCAGCCAAGACATAGC
CAGCCCTACTGCCCGCAGACGGGCCCTCCTCCGTGAGCTGGAAGCCCAGGTGCAGGCTGCCTAC
GGACAGAACCGAGAGCTGAGACCAGAAGAGATCGAAGAACTGCAGGTTGCCTTCCAGGAGTTTG
ACCGAGACCGGGATGGCTACATCGGCTACCGGGAGCTGGGTGCCTGCATGCGGACTCTGGGCTA
CATGCCCACGGAGATGGAGCTCATTGAGATATCACAGCAAATCAGTGGTGGGAAGGTGGATTTT
GAAGATTTTGTGGAGCTGATGGGTCCCAAGCTGCTGGCAGAGACGGCAGACATGATTGGCGTGA
GGGAGCTTCGAGACGCTTTCCGGGAGTTTGACACCAACGGGGATGGCTGCATCAGCGTAGGGGA
GCTCAGGGCAGCCCTCAAGGCTCTGTTGGGGGAACGCCTCAGCCAACGGGAAGTAGATGAGATA
CTCCAAGACATTGACCTCAATGGAGATGGCCTGGTTGACTTTGAAGAATTTGTTCGGATGATGT
CTCGGTGAACCTGTGTAGCAGCTGGAGTGGACACGCCTGGAGGATCCCAGCCTCCGAACTGCAG
AGGATCCTATATGTTCTTTGAAGGTCATTGTGTTCAGGACTGTGCATCTCCTCCCCATACCCTG
CCTGGGCACAGTGTCCTCGCCTGTCATCACCCCATATTTTGTCCTGGTTCCGTAGCAATAAAGC
AGCTCCCAGCTTGTATATTCCACTCA

hide sequence

RefSeq Acc Id:

XM_039101317 ⟹ XP_038957245

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	210,804,844 - 210,809,941 (+)	NCBI
mRatBN7.2	1	201,375,365 - 201,380,469 (+)	NCBI

RefSeq Acc Id:

XM_574595 ⟹ XP_574595

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	210,806,083 - 210,809,941 (+)	NCBI
mRatBN7.2	1	201,376,615 - 201,380,469 (+)	NCBI
Rnor_6.0	1	219,330,505 - 219,335,046 (+)	NCBI
Rnor_5.0	1	226,198,752 - 226,205,697 (+)	NCBI
RGSC_v3.4	1	206,665,715 - 206,670,392 (+)	RGD

Sequence:

show sequence

TTCTTTACTAAGGGACCCCAAGACTCAGCTGACTATAAAACACACCCAGAACCAAATCCACATA
TAGGTGACCAGAGTGGTCAGGAGAAGCTAGAGAACCCATATGCCACCTCTGTTGACACTGAGGG
ATCAGTACCCAGAGTTGGCCCTCCATGCACTATGTCCAGCTTTGAATGGATACAGGGTTTTGAC
AGGCGTGCACAGGAACTTCAGACTGGGCGGAAATAAAAGCAGCTAGGTTCTCTCTCTCTCCGAG
GACTTCATCCTCCAGTCCCCAGTTGCCACACTAGGAGTTGGGAATCCAACTGGCACAAGCACTG
GGTCCTTACTTCTTCTGGAGGGATCCAAGCATGCTTCTGAAGGGGCTGATTGGAGGAGATTAGT
GCAAGGCTGAGAGACGGGTTGGTTGGGGGGGGGCACTGTTCAGAAGACCCTCCTGAGGAAGATC
TGGGAGACTGTGCCTTCCAGGGGGCCTTTCCTCTGAGTAAACCCACACACACACTCACAGAGAT
ACTCAGAGATAATCCCGGATTGGATTAGGGCCCAAGCCCCAGGCCCAGGGCTCCCCGCCTGCCC
ACCCGCTCCTGATCTTGCCCACAAAACCCCAGGAAAATCCTCTCCAGTGCTCCCAGGCTGTCTC
TGGAAACAGCAGGGGGCTGGCAGAATCCACAGCATCCTCCCAGGACTCAGGACCTGGCATGGTT
CAGAGACCCATGGGGAACTGTGCCAAGCGGCCCTGGCACCGGGGGTCTAAGGAACGCTGGCAGT
GGCCTGGATCCCCCCTAGGGGGCTCCCGCCCCAGCCCTGGCCCCAGAGCTGAGGAGCAGGAGGG
GACACAGGGCTACTCAGTGCTCGGCAGCCTGGTGGGGCCAGCATGCATCTTCCTCCGACCCAGC
ATCGCCGCTACCCAGCTCAACCGAGAGCTGAGACCAGAAGAGATCGAAGAACTGCAGGTTGCCT
TCCAGGAGTTTGACCGAGACCGGGATGGCTACATCGGCTACCGGGAGCTGGGTGCCTGCATGCG
GACTCTGGGCTACATGCCCACGGAGATGGAGCTCATTGAGATATCACAGCAAATCAGTGGTGGG
AAGGTGGATTTTGAAGATTTTGTGGAGCTGATGGGTCCCAAGCTGCTGGCAGAGACGGCAGACA
TGATTGGCGTGAGGGAGCTTCGAGACGCTTTCCGGGAGTTTGACACCAACGGGGATGGCTGCAT
CAGCGTAGGGGAGCTCAGGGCAGCCCTCAAGGCTCTGTTGGGGGAACGCCTCAGCCAACGGGAA
GTAGATGAGATACTCCAAGACATTGACCTCAATGGAGATGGCCTGGTTGACTTTGAAGAATTTG
TTCGGATGATGTCTCGGTGAACCTGTGTAGCAGCTGGAGTGGACACGCCTGGAGGATCCCAGCC
TCCGAACTGCAGAGGATCCTATATGTTCTTTGAAGGTCATTGTGTTCAGGACTGTGCATCTCCT
CCCCATACCCTGCCTGGGCACAGTGTCCTCGCCTGTCATCACCCCATATTTTGTCCTGGTTCCG
TAGCAATAAAGCAGCTCCCAGCTTGTATATTCCACTCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001419393	(Get FASTA)	NCBI Sequence Viewer
	NP_001419394	(Get FASTA)	NCBI Sequence Viewer
	NP_001419395	(Get FASTA)	NCBI Sequence Viewer
	NP_001419396	(Get FASTA)	NCBI Sequence Viewer
	NP_001419397	(Get FASTA)	NCBI Sequence Viewer
	NP_001419398	(Get FASTA)	NCBI Sequence Viewer
	XP_006230986	(Get FASTA)	NCBI Sequence Viewer
	XP_038957245	(Get FASTA)	NCBI Sequence Viewer
	XP_574595	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM12354	(Get FASTA)	NCBI Sequence Viewer
	EDM12355	(Get FASTA)	NCBI Sequence Viewer
	EDM12356	(Get FASTA)	NCBI Sequence Viewer
	EDM12357	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000065316.2
	ENSRNOP00000082564
	ENSRNOP00000082564.2
	ENSRNOP00000086114
	ENSRNOP00000086114.1
	ENSRNOP00000102604.1

RefSeq Acc Id:	XP_574595 ⟸ XM_574595
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6A573 (UniProtKB/TrEMBL), A6HYS4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVQRPMGNCAKRPWHRGSKERWQWPGSPLGGSRPSPGPRAEEQEGTQGYSVLGSLVGPACIFLR PSIAATQLNRELRPEEIEELQVAFQEFDRDRDGYIGYRELGACMRTLGYMPTEMELIEISQQIS GGKVDFEDFVELMGPKLLAETADMIGVRELRDAFREFDTNGDGCISVGELRAALKALLGERLSQ REVDEILQDIDLNGDGLVDFEEFVRMMSR hide sequence

RefSeq Acc Id:

XP_006230986 ⟸ XM_006230924

- Peptide Label:

isoform X1

- Sequence:

show sequence

MALPEGPADGSLPEGDSSPSTGTAGPSQDIASPTARRRALLRELEAQVQAAYGQNRELRPEEIE
ELQVAFQEFDRDRDGYIGYRELGACMRTLGYMPTEMELIEISQQISGGKVDFEDFVELMGPKLL
AETADMIGVRELRDAFREFDTNGDGCISVGELRAALKALLGERLSQREVDEILQDIDLNGDGLV
DFEEFVRMMSR

hide sequence

Ensembl Acc Id:

ENSRNOP00000065316 ⟸ ENSRNOT00000071109

RefSeq Acc Id:	XP_038957245 ⟸ XM_039101317
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSRNOP00000082564 ⟸ ENSRNOT00000102246

Ensembl Acc Id:

ENSRNOP00000086114 ⟸ ENSRNOT00000096614

Ensembl Acc Id:

ENSRNOP00000102604 ⟸ ENSRNOT00000143709

Protein Domains

EF-hand

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-M0R793-F1-model_v2	AlphaFold	M0R793	1-203	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1563670	AgrOrtholog
BioCyc Gene	G2FUF-56780	BioCyc
Ensembl Genes	ENSRNOG00000018339	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000071109.5	UniProtKB/TrEMBL
	ENSRNOT00000096614	ENTREZGENE
	ENSRNOT00000096614.2	UniProtKB/TrEMBL
	ENSRNOT00000102246	ENTREZGENE
	ENSRNOT00000102246.2	UniProtKB/TrEMBL
	ENSRNOT00000143709.1	UniProtKB/TrEMBL
Gene3D-CATH	EF-hand	UniProtKB/TrEMBL
InterPro	CaBP1/2/4/5	UniProtKB/TrEMBL
	EF-hand-like_dom	UniProtKB/TrEMBL
	EF_Hand_1_Ca_BS	UniProtKB/TrEMBL
	EF_hand_Ca-bd	UniProtKB/TrEMBL
KEGG Report	rno:499298	UniProtKB/TrEMBL
NCBI Gene	499298	ENTREZGENE
PANTHER	PTHR45917	UniProtKB/TrEMBL
	PTHR45917:SF2	UniProtKB/TrEMBL
Pfam	EF_hand_5	UniProtKB/TrEMBL
PhenoGen	Cabp2	PhenoGen
PROSITE	EF_HAND_1	UniProtKB/TrEMBL
	EF_HAND_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000018339	RatGTEx
SMART	EFh	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47473	UniProtKB/TrEMBL
UniProt	A0A8I5ZVH6_RAT	UniProtKB/TrEMBL
	A0A8I6A573	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0L206_RAT	UniProtKB/TrEMBL
	A6HYS3	ENTREZGENE, UniProtKB/TrEMBL
	A6HYS4	ENTREZGENE, UniProtKB/TrEMBL
	M0R793	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-06	Cabp2	calcium binding protein 2	RGD1563670_predicted	similar to L-CaBP2 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1563670_predicted	similar to L-CaBP2 (predicted)	LOC499298	similar to L-CaBP2	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC499298	similar to L-CaBP2			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

RGD Manual Annotations

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

RGD Manual Annotations