Symbol:
Cenpa
Name:
centromere protein A
RGD ID:
1563607
Description:
Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be involved in centromere complex assembly; establishment of mitotic spindle orientation; and mitotic cytokinesis. Predicted to act upstream of or within protein localization to chromosome, centromeric region. Predicted to be located in chromosome, centromeric region and nucleoplasm. Predicted to be part of CENP-A containing nucleosome. Human ortholog(s) of this gene implicated in autoimmune disease. Orthologous to human CENPA (centromere protein A); INTERACTS WITH 1,2-dimethylhydrazine; 1-naphthyl isothiocyanate; 17beta-estradiol.
Type:
protein-coding
RefSeq Status:
PROVISIONAL
Previously known as:
histone H3-like centromeric protein A; LOC298850; RGD1563607; similar to centromere protein A
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
CENPA (centromere protein A) HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):
Cenpa (centromere protein A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Cenpa (centromere protein A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
CENPA (centromere protein A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
CENPA (centromere protein A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Cenpa (centromere protein A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
CENPA (centromere protein A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
CENPA (centromere protein A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Cenpa (centromere protein A) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Homo sapiens (human):
CENPA (centromere protein A)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Cenpa (centromere protein A)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Drosophila melanogaster (fruit fly):
cid
Alliance
DIOPT (OMA|PANTHER|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):
cenpa
Alliance
DIOPT (Hieranoid|InParanoid|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 6 31,420,062 - 31,431,703 (-) NCBI GRCr8 mRatBN7.2 6 25,700,142 - 25,711,767 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 6 25,700,142 - 25,711,675 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 6 26,004,502 - 26,011,743 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 6 26,320,374 - 26,327,620 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 6 25,800,027 - 25,807,259 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 6 27,072,259 - 27,080,863 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 6 27,072,166 - 27,080,856 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 6 36,887,831 - 36,896,429 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 6 25,686,603 - 25,693,840 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 6 25,193,302 - 25,201,670 (-) NCBI Celera Cytogenetic Map 6 q14 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Cenpa Rat (-)-epigallocatechin 3-gallate multiple interactions ISO CENPA (Homo sapiens) 6480464 [potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of CENPA mRNA CTD PMID:22079256 Cenpa Rat 1,1-dichloroethene increases expression ISO Cenpa (Mus musculus) 6480464 vinylidene chloride results in increased expression of CENPA mRNA CTD PMID:26682919 Cenpa Rat 1,2-dichloroethane decreases expression ISO Cenpa (Mus musculus) 6480464 ethylene dichloride results in decreased expression of CENPA mRNA CTD PMID:28189721 and PMID:28960355 Cenpa Rat 1,2-dimethylhydrazine decreases expression EXP 6480464 1 and 2-Dimethylhydrazine results in decreased expression of CENPA mRNA CTD PMID:27840820 Cenpa Rat 1-naphthyl isothiocyanate increases expression EXP 6480464 1-Naphthylisothiocyanate results in increased expression of CENPA mRNA CTD PMID:30723492 Cenpa Rat 17alpha-ethynylestradiol increases expression ISO Cenpa (Mus musculus) 6480464 Ethinyl Estradiol results in increased expression of CENPA mRNA CTD PMID:17942748 Cenpa Rat 17alpha-ethynylestradiol multiple interactions ISO Cenpa (Mus musculus) 6480464 [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of CENPA mRNA CTD PMID:17942748 Cenpa Rat 17beta-estradiol increases expression ISO Cenpa (Mus musculus) 6480464 Estradiol results in increased expression of CENPA mRNA CTD PMID:25210133 Cenpa Rat 17beta-estradiol increases expression EXP 6480464 Estradiol results in increased expression of CENPA mRNA CTD PMID:32145629 Cenpa Rat 17beta-estradiol multiple interactions EXP 6480464 [estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of CENPA mRNA CTD PMID:32741896 Cenpa Rat 17beta-estradiol multiple interactions ISO CENPA (Homo sapiens) 6480464 Fulvestrant inhibits the reaction [Estradiol results in increased expression of CENPA mRNA] CTD PMID:31646340 Cenpa Rat 17beta-estradiol increases expression ISO CENPA (Homo sapiens) 6480464 Estradiol results in increased expression of CENPA mRNA CTD PMID:16474171 more ... Cenpa Rat 17beta-estradiol multiple interactions ISO Cenpa (Mus musculus) 6480464 ESR1 protein promotes the reaction [Estradiol results in increased expression of CENPA mRNA] CTD PMID:25210133 Cenpa Rat 17beta-estradiol 3-benzoate multiple interactions EXP 6480464 [estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of CENPA mRNA CTD PMID:32741896 Cenpa Rat 2,3,7,8-tetrachlorodibenzodioxine multiple interactions ISO Cenpa (Mus musculus) 6480464 [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of CENPA mRNA CTD PMID:17942748 Cenpa Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of CENPA mRNA CTD PMID:33387578 and PMID:34747641 Cenpa Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression ISO Cenpa (Mus musculus) 6480464 Tetrachlorodibenzodioxin results in increased expression of CENPA mRNA CTD PMID:37172768 Cenpa Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO Cenpa (Mus musculus) 6480464 Tetrachlorodibenzodioxin affects the expression of CENPA mRNA CTD PMID:21570461 Cenpa Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO CENPA (Homo sapiens) 6480464 Tetrachlorodibenzodioxin results in decreased expression of CENPA mRNA CTD PMID:21802500 Cenpa Rat 2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expression ISO Cenpa (Mus musculus) 6480464 2 more ... CTD PMID:38648751 Cenpa Rat 2-methylcholine affects expression ISO CENPA (Homo sapiens) 6480464 beta-methylcholine affects the expression of CENPA mRNA CTD PMID:21179406 Cenpa Rat 2-palmitoylglycerol increases expression ISO CENPA (Homo sapiens) 6480464 2-palmitoylglycerol results in increased expression of CENPA mRNA CTD PMID:37199045 Cenpa Rat 3,3',4,4'-tetrachlorobiphenyl multiple interactions ISO Cenpa (Mus musculus) 6480464 3 more ... CTD PMID:19467301 Cenpa Rat 3-isobutyl-1-methyl-7H-xanthine multiple interactions ISO CENPA (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of CENPA mRNA CTD PMID:28628672 Cenpa Rat 3-methylcholanthrene increases expression ISO Cenpa (Mus musculus) 6480464 Methylcholanthrene results in increased expression of CENPA mRNA CTD PMID:20713471 Cenpa Rat 4,4'-sulfonyldiphenol multiple interactions ISO CENPA (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of CENPA mRNA CTD PMID:28628672 Cenpa Rat 4-hydroxynon-2-enal decreases expression ISO Cenpa (Mus musculus) 6480464 4-hydroxy-2-nonenal results in decreased expression of CENPA mRNA CTD PMID:19191707 Cenpa Rat 4-hydroxyphenyl retinamide increases expression ISO Cenpa (Mus musculus) 6480464 Fenretinide results in increased expression of CENPA mRNA CTD PMID:28973697 Cenpa Rat 5-azacytidine multiple interactions ISO CENPA (Homo sapiens) 6480464 [Azacitidine co-treated with Thalidomide] affects the expression of CENPA mRNA CTD PMID:18720364 Cenpa Rat 6-propyl-2-thiouracil increases expression EXP 6480464 Propylthiouracil results in increased expression of CENPA mRNA CTD PMID:24780913 and PMID:30047161 Cenpa Rat acetamide increases expression EXP 6480464 acetamide results in increased expression of CENPA mRNA CTD PMID:31881176 Cenpa Rat acrylamide increases expression EXP 6480464 Acrylamide results in increased expression of CENPA mRNA CTD PMID:28959563 Cenpa Rat afimoxifene decreases expression ISO CENPA (Homo sapiens) 6480464 afimoxifene results in decreased expression of CENPA mRNA CTD PMID:16514628 Cenpa Rat aflatoxin B1 affects expression ISO CENPA (Homo sapiens) 6480464 Aflatoxin B1 affects the expression of CENPA protein CTD PMID:20106945 Cenpa Rat aflatoxin B1 decreases expression ISO CENPA (Homo sapiens) 6480464 Aflatoxin B1 results in decreased expression of CENPA mRNA CTD PMID:32234424 Cenpa Rat aflatoxin B1 increases expression EXP 6480464 Aflatoxin B1 results in increased expression of CENPA mRNA CTD PMID:23630614 Cenpa Rat aflatoxin B1 decreases expression ISO Cenpa (Mus musculus) 6480464 Aflatoxin B1 results in decreased expression of CENPA mRNA CTD PMID:19770486 Cenpa Rat all-trans-retinoic acid decreases expression ISO CENPA (Homo sapiens) 6480464 Tretinoin results in decreased expression of CENPA mRNA CTD PMID:33167477 Cenpa Rat amitrole increases expression EXP 6480464 Amitrole results in increased expression of CENPA mRNA CTD PMID:30047161 Cenpa Rat arsenite(3-) decreases expression ISO Cenpa (Mus musculus) 6480464 arsenite results in decreased expression of CENPA mRNA CTD PMID:18929588 Cenpa Rat arsenite(3-) multiple interactions ISO CENPA (Homo sapiens) 6480464 arsenite promotes the reaction [G3BP1 protein binds to CENPA mRNA] CTD PMID:32406909 Cenpa Rat arsenite(3-) decreases expression ISO CENPA (Homo sapiens) 6480464 arsenite results in decreased expression of CENPA mRNA CTD PMID:31646340 Cenpa Rat azathioprine decreases expression ISO CENPA (Homo sapiens) 6480464 Azathioprine results in decreased expression of CENPA mRNA CTD PMID:22623647 Cenpa Rat benzo[a]pyrene decreases expression ISO Cenpa (Mus musculus) 6480464 Benzo(a)pyrene results in decreased expression of CENPA protein CTD PMID:29145655 Cenpa Rat benzo[a]pyrene decreases methylation ISO CENPA (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased methylation of CENPA promoter CTD PMID:27901495 Cenpa Rat benzo[a]pyrene decreases methylation ISO Cenpa (Mus musculus) 6480464 Benzo(a)pyrene results in decreased methylation of CENPA promoter CTD PMID:27901495 Cenpa Rat benzo[a]pyrene decreases expression ISO CENPA (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased expression of CENPA mRNA CTD PMID:20064835 more ... Cenpa Rat benzo[a]pyrene diol epoxide I decreases expression ISO CENPA (Homo sapiens) 6480464 7 more ... CTD PMID:19150397 more ... Cenpa Rat benzo[b]fluoranthene increases expression ISO Cenpa (Mus musculus) 6480464 benzo(b)fluoranthene results in increased expression of CENPA mRNA CTD PMID:26377693 Cenpa Rat bis(2-chloroethyl) sulfide decreases expression ISO CENPA (Homo sapiens) 6480464 Mustard Gas results in decreased expression of CENPA mRNA CTD PMID:25102026 Cenpa Rat bisphenol A increases expression ISO CENPA (Homo sapiens) 6480464 bisphenol A results in increased expression of CENPA mRNA CTD PMID:16474171 Cenpa Rat bisphenol A increases expression ISO Cenpa (Mus musculus) 6480464 bisphenol A results in increased expression of CENPA mRNA CTD PMID:33221593 Cenpa Rat bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of CENPA mRNA CTD PMID:32145629 Cenpa Rat bisphenol A decreases expression ISO CENPA (Homo sapiens) 6480464 bisphenol A results in decreased expression of CENPA mRNA CTD PMID:29275510 Cenpa Rat bisphenol A increases methylation EXP 6480464 bisphenol A results in increased methylation of CENPA gene CTD PMID:28505145 Cenpa Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of CENPA mRNA CTD PMID:25181051 and PMID:34947998 Cenpa Rat bisphenol F decreases expression ISO Cenpa (Mus musculus) 6480464 bisphenol F results in decreased expression of CENPA mRNA CTD PMID:38685157 Cenpa Rat butan-1-ol multiple interactions ISO CENPA (Homo sapiens) 6480464 [[Gasoline co-treated with 1-Butanol] results in increased abundance of [Particulate Matter co-treated with Polycyclic Aromatic Hydrocarbons]] which results in decreased expression of CENPA mRNA CTD PMID:29432896 Cenpa Rat cadmium atom decreases expression ISO CENPA (Homo sapiens) 6480464 Cadmium results in decreased expression of CENPA mRNA CTD PMID:24376830 and PMID:31646340 Cenpa Rat cadmium atom multiple interactions ISO CENPA (Homo sapiens) 6480464 Cadmium inhibits the reaction [Fulvestrant results in decreased expression of CENPA mRNA] CTD PMID:31646340 Cenpa Rat calcitriol decreases expression ISO CENPA (Homo sapiens) 6480464 Calcitriol results in decreased expression of CENPA mRNA CTD PMID:21592394 Cenpa Rat calcitriol multiple interactions ISO CENPA (Homo sapiens) 6480464 [Testosterone co-treated with Calcitriol] results in decreased expression of CENPA mRNA CTD PMID:21592394 Cenpa Rat cantharidin decreases expression ISO Cenpa (Mus musculus) 6480464 Cantharidin results in decreased expression of CENPA mRNA CTD PMID:36907384 Cenpa Rat carbon nanotube affects expression ISO Cenpa (Mus musculus) 6480464 Nanotubes and Carbon affects the expression of CENPA mRNA CTD PMID:25554681 Cenpa Rat chloroprene decreases expression ISO Cenpa (Mus musculus) 6480464 Chloroprene results in decreased expression of CENPA mRNA CTD PMID:23125180 Cenpa Rat choline multiple interactions ISO Cenpa (Mus musculus) 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of CENPA gene CTD PMID:20938992 Cenpa Rat cisplatin multiple interactions ISO CENPA (Homo sapiens) 6480464 [Cisplatin co-treated with jinfukang] results in decreased expression of CENPA mRNA and [Piroxicam co-treated with Cisplatin] results in decreased expression of CENPA mRNA CTD PMID:21858171 and PMID:27392435 Cenpa Rat cisplatin decreases expression ISO CENPA (Homo sapiens) 6480464 Cisplatin results in decreased expression of CENPA mRNA CTD PMID:27392435 and PMID:27594783 Cenpa Rat cisplatin decreases expression ISO Cenpa (Mus musculus) 6480464 Cisplatin results in decreased expression of CENPA mRNA CTD PMID:25270620 Cenpa Rat cobalt dichloride decreases expression ISO CENPA (Homo sapiens) 6480464 cobaltous chloride results in decreased expression of CENPA mRNA CTD PMID:19320972 and PMID:19376846 Cenpa Rat copper atom increases expression EXP 6480464 Copper results in increased expression of CENPA mRNA CTD PMID:30556269 Cenpa Rat copper(0) increases expression EXP 6480464 Copper results in increased expression of CENPA mRNA CTD PMID:30556269 Cenpa Rat copper(II) sulfate decreases expression ISO CENPA (Homo sapiens) 6480464 Copper Sulfate results in decreased expression of CENPA mRNA CTD PMID:19549813 Cenpa Rat coumestrol multiple interactions ISO CENPA (Homo sapiens) 6480464 [Coumestrol co-treated with 2 more ... CTD PMID:19167446 Cenpa Rat coumestrol increases expression ISO CENPA (Homo sapiens) 6480464 Coumestrol results in increased expression of CENPA mRNA CTD PMID:19167446 Cenpa Rat crocidolite asbestos increases expression ISO Cenpa (Mus musculus) 6480464 Asbestos and Crocidolite results in increased expression of CENPA mRNA CTD PMID:29279043 Cenpa Rat CU-O LINKAGE decreases expression ISO CENPA (Homo sapiens) 6480464 cupric oxide results in decreased expression of CENPA mRNA CTD PMID:22077320 Cenpa Rat cyclosporin A decreases expression ISO CENPA (Homo sapiens) 6480464 Cyclosporine results in decreased expression of CENPA mRNA CTD PMID:25562108 Cenpa Rat cypermethrin increases expression ISO Cenpa (Mus musculus) 6480464 cypermethrin results in increased expression of CENPA mRNA CTD PMID:29020013 Cenpa Rat DDE increases expression ISO CENPA (Homo sapiens) 6480464 Dichlorodiphenyl Dichloroethylene results in increased expression of CENPA mRNA CTD PMID:38568856 Cenpa Rat decabromodiphenyl ether increases expression EXP 6480464 decabromobiphenyl ether results in increased expression of CENPA mRNA CTD PMID:23914054 Cenpa Rat dexamethasone multiple interactions ISO CENPA (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of CENPA mRNA CTD PMID:28628672 Cenpa Rat diallyl trisulfide decreases expression ISO CENPA (Homo sapiens) 6480464 diallyl trisulfide results in decreased expression of CENPA mRNA CTD PMID:34995734 Cenpa Rat diethylstilbestrol increases expression EXP 6480464 Diethylstilbestrol results in increased expression of CENPA mRNA CTD PMID:36653537 Cenpa Rat dorsomorphin multiple interactions ISO CENPA (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of CENPA mRNA CTD PMID:27188386 Cenpa Rat doxorubicin affects response to substance ISO CENPA (Homo sapiens) 6480464 CENPA protein affects the susceptibility to Doxorubicin CTD PMID:16217747 Cenpa Rat doxorubicin decreases expression ISO CENPA (Homo sapiens) 6480464 Doxorubicin results in decreased expression of CENPA protein CTD PMID:15870702 Cenpa Rat endosulfan decreases expression EXP 6480464 Endosulfan results in decreased expression of CENPA mRNA CTD PMID:29391264 Cenpa Rat Enterolactone multiple interactions ISO CENPA (Homo sapiens) 6480464 [Coumestrol co-treated with 2 and 3-bis(3'-hydroxybenzyl)butyrolactone] results in increased expression of CENPA mRNA CTD PMID:19167446 Cenpa Rat folic acid multiple interactions ISO Cenpa (Mus musculus) 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of CENPA gene CTD PMID:20938992 Cenpa Rat formaldehyde decreases expression ISO CENPA (Homo sapiens) 6480464 Formaldehyde results in decreased expression of CENPA mRNA CTD PMID:23649840 Cenpa Rat FR900359 increases phosphorylation ISO CENPA (Homo sapiens) 6480464 FR900359 results in increased phosphorylation of CENPA protein CTD PMID:37730182 Cenpa Rat fulvestrant decreases expression ISO CENPA (Homo sapiens) 6480464 Fulvestrant results in decreased expression of CENPA mRNA CTD PMID:16514628 and PMID:31646340 Cenpa Rat fulvestrant multiple interactions ISO CENPA (Homo sapiens) 6480464 Cadmium inhibits the reaction [Fulvestrant results in decreased expression of CENPA mRNA] and Fulvestrant inhibits the reaction [Estradiol results in increased expression of CENPA mRNA] CTD PMID:31646340 Cenpa Rat furan increases methylation EXP 6480464 furan results in increased methylation of CENPA gene CTD PMID:22079235 Cenpa Rat furan increases expression EXP 6480464 furan results in increased expression of CENPA mRNA CTD PMID:25539665 Cenpa Rat genistein increases expression ISO CENPA (Homo sapiens) 6480464 Genistein results in increased expression of CENPA mRNA CTD PMID:16474171 Cenpa Rat gentamycin decreases expression EXP 6480464 Gentamicins results in decreased expression of CENPA mRNA CTD PMID:33387578 Cenpa Rat hydrogen peroxide decreases expression ISO CENPA (Homo sapiens) 6480464 Hydrogen Peroxide results in decreased expression of CENPA mRNA CTD PMID:12414654 Cenpa Rat hydroquinone decreases expression ISO CENPA (Homo sapiens) 6480464 hydroquinone results in decreased expression of CENPA mRNA CTD PMID:23416264 Cenpa Rat Indeno[1,2,3-cd]pyrene decreases expression ISO CENPA (Homo sapiens) 6480464 indeno(1 more ... CTD PMID:32251684 Cenpa Rat indometacin multiple interactions ISO CENPA (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of CENPA mRNA CTD PMID:28628672 Cenpa Rat isobutanol multiple interactions ISO CENPA (Homo sapiens) 6480464 [[Gasoline co-treated with isobutyl alcohol] results in increased abundance of [Particulate Matter co-treated with Polycyclic Aromatic Hydrocarbons]] which results in decreased expression of CENPA mRNA CTD PMID:29432896 Cenpa Rat isoprenaline decreases expression ISO Cenpa (Mus musculus) 6480464 Isoproterenol results in decreased expression of CENPA mRNA CTD PMID:20003209 Cenpa Rat L-methionine multiple interactions ISO Cenpa (Mus musculus) 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of CENPA gene CTD PMID:20938992 Cenpa Rat leflunomide decreases expression ISO CENPA (Homo sapiens) 6480464 leflunomide results in decreased expression of CENPA mRNA CTD PMID:28988120 Cenpa Rat lidocaine increases expression EXP 6480464 Lidocaine results in increased expression of CENPA mRNA CTD PMID:35283115 Cenpa Rat lipopolysaccharide multiple interactions ISO CENPA (Homo sapiens) 6480464 [NAT10 protein affects the susceptibility to Lipopolysaccharides] which affects the expression of CENPA mRNA CTD PMID:35877022 Cenpa Rat lucanthone decreases expression ISO CENPA (Homo sapiens) 6480464 Lucanthone results in decreased expression of CENPA mRNA CTD PMID:21148553 Cenpa Rat menadione decreases expression ISO CENPA (Homo sapiens) 6480464 Vitamin K 3 results in decreased expression of CENPA mRNA CTD PMID:12414654 Cenpa Rat methimazole increases expression EXP 6480464 Methimazole results in increased expression of CENPA mRNA CTD PMID:30047161 Cenpa Rat methyl methanesulfonate decreases expression ISO CENPA (Homo sapiens) 6480464 Methyl Methanesulfonate results in decreased expression of CENPA mRNA CTD PMID:23649840 Cenpa Rat methylseleninic acid affects expression ISO CENPA (Homo sapiens) 6480464 methylselenic acid affects the expression of CENPA mRNA CTD PMID:14617803 Cenpa Rat N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal decreases expression ISO Cenpa (Mus musculus) 6480464 benzyloxycarbonylleucyl-leucyl-leucine aldehyde results in decreased expression of CENPA mRNA CTD PMID:25566086 Cenpa Rat N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal multiple interactions ISO Cenpa (Mus musculus) 6480464 MYBPC3 protein affects the reaction [benzyloxycarbonylleucyl-leucyl-leucine aldehyde results in decreased expression of CENPA mRNA] CTD PMID:25566086 Cenpa Rat N-methyl-N-nitrosourea decreases expression ISO CENPA (Homo sapiens) 6480464 Methylnitrosourea results in decreased expression of CENPA mRNA CTD PMID:27233451 Cenpa Rat N-nitrosodiethylamine multiple interactions ISO Cenpa (Mus musculus) 6480464 RB1 protein inhibits the reaction [Diethylnitrosamine results in increased expression of CENPA mRNA] CTD PMID:17854601 Cenpa Rat N-nitrosodiethylamine increases expression ISO Cenpa (Mus musculus) 6480464 Diethylnitrosamine results in increased expression of CENPA mRNA CTD PMID:17854601 and PMID:24535843 Cenpa Rat N-Nitrosopyrrolidine decreases expression ISO CENPA (Homo sapiens) 6480464 N-Nitrosopyrrolidine results in decreased expression of CENPA mRNA CTD PMID:32234424 Cenpa Rat niclosamide decreases expression ISO CENPA (Homo sapiens) 6480464 Niclosamide results in decreased expression of CENPA mRNA CTD PMID:28284560 Cenpa Rat O-methyleugenol decreases expression ISO CENPA (Homo sapiens) 6480464 methyleugenol results in decreased expression of CENPA mRNA CTD PMID:32234424 Cenpa Rat ozone multiple interactions ISO Cenpa (Mus musculus) 6480464 [Air Pollutants results in increased abundance of [Ozone co-treated with Soot]] which results in increased expression of CENPA mRNA and [Air Pollutants results in increased abundance of Ozone] which results in increased expression of CENPA mRNA CTD PMID:27106289 and PMID:34911549 Cenpa Rat palbociclib decreases expression ISO CENPA (Homo sapiens) 6480464 palbociclib results in decreased expression of CENPA mRNA CTD PMID:22869556 Cenpa Rat paracetamol increases expression ISO CENPA (Homo sapiens) 6480464 Acetaminophen results in increased expression of CENPA mRNA CTD PMID:22230336 Cenpa Rat paracetamol decreases expression EXP 6480464 Acetaminophen results in decreased expression of CENPA mRNA CTD PMID:33387578 Cenpa Rat parathion decreases expression ISO Cenpa (Mus musculus) 6480464 Parathion results in decreased expression of CENPA mRNA CTD PMID:34813904 Cenpa Rat perfluorononanoic acid decreases expression ISO CENPA (Homo sapiens) 6480464 perfluoro-n-nonanoic acid results in decreased expression of CENPA mRNA CTD PMID:32588087 Cenpa Rat phenobarbital multiple interactions ISO Cenpa (Mus musculus) 6480464 NR1I3 protein affects the reaction [Phenobarbital results in increased expression of CENPA mRNA] CTD PMID:19482888 Cenpa Rat phenobarbital affects expression ISO Cenpa (Mus musculus) 6480464 Phenobarbital affects the expression of CENPA mRNA CTD PMID:23091169 Cenpa Rat phenobarbital increases expression ISO Cenpa (Mus musculus) 6480464 Phenobarbital results in increased expression of CENPA mRNA CTD PMID:19482888 Cenpa Rat phenylmercury acetate decreases expression ISO CENPA (Homo sapiens) 6480464 Phenylmercuric Acetate results in decreased expression of CENPA mRNA CTD PMID:26272509 Cenpa Rat phenylmercury acetate multiple interactions ISO CENPA (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of CENPA mRNA CTD PMID:27188386 Cenpa Rat pirinixic acid multiple interactions ISO Cenpa (Mus musculus) 6480464 [pirinixic acid binds to and results in increased activity of PPARA protein] which results in increased expression of CENPA mRNA CTD PMID:19710929 Cenpa Rat pirinixic acid increases expression ISO Cenpa (Mus musculus) 6480464 pirinixic acid results in increased expression of CENPA mRNA CTD PMID:18301758 Cenpa Rat piroxicam multiple interactions ISO CENPA (Homo sapiens) 6480464 [Piroxicam co-treated with Cisplatin] results in decreased expression of CENPA mRNA CTD PMID:21858171 Cenpa Rat potassium chromate multiple interactions ISO CENPA (Homo sapiens) 6480464 [potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of CENPA mRNA CTD PMID:22079256 Cenpa Rat potassium chromate decreases expression ISO CENPA (Homo sapiens) 6480464 potassium chromate(VI) results in decreased expression of CENPA mRNA CTD PMID:22079256 Cenpa Rat pregnenolone 16alpha-carbonitrile increases expression EXP 6480464 Pregnenolone Carbonitrile results in increased expression of CENPA mRNA CTD PMID:30047161 Cenpa Rat progesterone decreases expression ISO CENPA (Homo sapiens) 6480464 Progesterone results in decreased expression of CENPA mRNA CTD PMID:21795739 Cenpa Rat propanal decreases expression ISO CENPA (Homo sapiens) 6480464 propionaldehyde results in decreased expression of CENPA mRNA CTD PMID:26079696 Cenpa Rat quercetin decreases expression ISO CENPA (Homo sapiens) 6480464 Quercetin results in decreased expression of CENPA mRNA CTD PMID:21632981 Cenpa Rat raloxifene decreases expression ISO CENPA (Homo sapiens) 6480464 Raloxifene Hydrochloride results in decreased expression of CENPA mRNA CTD PMID:16514628 Cenpa Rat resveratrol multiple interactions ISO CENPA (Homo sapiens) 6480464 [Coumestrol co-treated with resveratrol] results in increased expression of CENPA mRNA CTD PMID:19167446 Cenpa Rat SB 431542 multiple interactions ISO CENPA (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of CENPA mRNA CTD PMID:27188386 Cenpa Rat silicon dioxide increases expression ISO Cenpa (Mus musculus) 6480464 Silicon Dioxide results in increased expression of CENPA mRNA CTD PMID:29341224 Cenpa Rat silver atom decreases expression ISO CENPA (Homo sapiens) 6480464 Silver results in decreased expression of CENPA mRNA CTD PMID:26014281 Cenpa Rat silver(0) decreases expression ISO CENPA (Homo sapiens) 6480464 Silver results in decreased expression of CENPA mRNA CTD PMID:26014281 Cenpa Rat sodium arsenite increases expression ISO CENPA (Homo sapiens) 6480464 sodium arsenite results in increased expression of CENPA mRNA CTD PMID:24570342 and PMID:29301061 Cenpa Rat sodium arsenite decreases expression ISO CENPA (Homo sapiens) 6480464 sodium arsenite results in decreased expression of CENPA mRNA CTD PMID:38568856 Cenpa Rat sodium arsenite decreases expression ISO Cenpa (Mus musculus) 6480464 sodium arsenite results in decreased expression of CENPA mRNA CTD PMID:16014739 and PMID:17998272 Cenpa Rat sodium arsenite decreases methylation ISO CENPA (Homo sapiens) 6480464 sodium arsenite results in decreased methylation of CENPA gene CTD PMID:24570342 Cenpa Rat sulfadimethoxine increases expression EXP 6480464 Sulfadimethoxine results in increased expression of CENPA mRNA CTD PMID:30047161 Cenpa Rat sunitinib decreases expression ISO CENPA (Homo sapiens) 6480464 Sunitinib results in decreased expression of CENPA mRNA CTD PMID:31533062 Cenpa Rat tamoxifen affects expression ISO Cenpa (Mus musculus) 6480464 Tamoxifen affects the expression of CENPA mRNA CTD PMID:20937368 Cenpa Rat tert-butyl hydroperoxide decreases expression ISO CENPA (Homo sapiens) 6480464 tert-Butylhydroperoxide results in decreased expression of CENPA mRNA CTD PMID:12414654 Cenpa Rat testosterone multiple interactions ISO CENPA (Homo sapiens) 6480464 [Testosterone co-treated with Calcitriol] results in decreased expression of CENPA mRNA CTD PMID:21592394 Cenpa Rat testosterone multiple interactions EXP 6480464 [estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of CENPA mRNA CTD PMID:32741896 Cenpa Rat testosterone decreases expression ISO CENPA (Homo sapiens) 6480464 Testosterone results in decreased expression of CENPA mRNA CTD PMID:21592394 Cenpa Rat tetrachloromethane increases expression ISO Cenpa (Mus musculus) 6480464 Carbon Tetrachloride results in increased expression of CENPA mRNA CTD PMID:17484886 Cenpa Rat tetrachloromethane affects expression ISO Cenpa (Mus musculus) 6480464 Carbon Tetrachloride affects the expression of CENPA mRNA CTD PMID:31919559 Cenpa Rat thalidomide multiple interactions ISO CENPA (Homo sapiens) 6480464 [Azacitidine co-treated with Thalidomide] affects the expression of CENPA mRNA CTD PMID:18720364 Cenpa Rat thapsigargin decreases expression ISO CENPA (Homo sapiens) 6480464 Thapsigargin results in decreased expression of CENPA mRNA CTD PMID:22378314 Cenpa Rat thioacetamide increases expression EXP 6480464 Thioacetamide results in increased expression of CENPA mRNA CTD PMID:22659510 and PMID:23411599 Cenpa Rat thioacetamide affects expression EXP 6480464 Thioacetamide affects the expression of CENPA mRNA CTD PMID:34492290 Cenpa Rat thiram decreases expression ISO CENPA (Homo sapiens) 6480464 Thiram results in decreased expression of CENPA mRNA CTD PMID:38568856 Cenpa Rat titanium dioxide decreases methylation ISO Cenpa (Mus musculus) 6480464 titanium dioxide results in decreased methylation of CENPA gene CTD PMID:35295148 Cenpa Rat trichloroethene increases methylation EXP 6480464 Trichloroethylene results in increased methylation of CENPA gene CTD PMID:27618143 Cenpa Rat trichloroethene decreases expression EXP 6480464 Trichloroethylene results in decreased expression of CENPA mRNA CTD PMID:33387578 Cenpa Rat trimellitic anhydride increases expression ISO Cenpa (Mus musculus) 6480464 trimellitic anhydride results in increased expression of CENPA mRNA CTD PMID:19042947 Cenpa Rat triptonide decreases expression ISO Cenpa (Mus musculus) 6480464 triptonide results in decreased expression of CENPA mRNA CTD PMID:33045310 Cenpa Rat troglitazone decreases expression ISO CENPA (Homo sapiens) 6480464 troglitazone results in decreased expression of CENPA mRNA CTD PMID:19140230 Cenpa Rat trovafloxacin decreases expression ISO Cenpa (Mus musculus) 6480464 trovafloxacin results in decreased expression of CENPA mRNA CTD PMID:35537566 Cenpa Rat tungsten increases expression ISO Cenpa (Mus musculus) 6480464 Tungsten results in increased expression of CENPA mRNA CTD PMID:30912803 Cenpa Rat tunicamycin decreases expression ISO CENPA (Homo sapiens) 6480464 Tunicamycin results in decreased expression of CENPA mRNA CTD PMID:22378314 Cenpa Rat valproic acid affects expression ISO CENPA (Homo sapiens) 6480464 Valproic Acid affects the expression of CENPA mRNA CTD PMID:25979313 Cenpa Rat vincaleukoblastine affects response to substance ISO CENPA (Homo sapiens) 6480464 CENPA protein affects the susceptibility to Vinblastine CTD PMID:16217747 Cenpa Rat zoledronic acid decreases expression ISO CENPA (Homo sapiens) 6480464 zoledronic acid results in decreased expression of CENPA mRNA CTD PMID:24714768
(-)-epigallocatechin 3-gallate (ISO) 1,1-dichloroethene (ISO) 1,2-dichloroethane (ISO) 1,2-dimethylhydrazine (EXP) 1-naphthyl isothiocyanate (EXP) 17alpha-ethynylestradiol (ISO) 17beta-estradiol (EXP,ISO) 17beta-estradiol 3-benzoate (EXP) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO) 2-methylcholine (ISO) 2-palmitoylglycerol (ISO) 3,3',4,4'-tetrachlorobiphenyl (ISO) 3-isobutyl-1-methyl-7H-xanthine (ISO) 3-methylcholanthrene (ISO) 4,4'-sulfonyldiphenol (ISO) 4-hydroxynon-2-enal (ISO) 4-hydroxyphenyl retinamide (ISO) 5-azacytidine (ISO) 6-propyl-2-thiouracil (EXP) acetamide (EXP) acrylamide (EXP) afimoxifene (ISO) aflatoxin B1 (EXP,ISO) all-trans-retinoic acid (ISO) amitrole (EXP) arsenite(3-) (ISO) azathioprine (ISO) benzo[a]pyrene (ISO) benzo[a]pyrene diol epoxide I (ISO) benzo[b]fluoranthene (ISO) bis(2-chloroethyl) sulfide (ISO) bisphenol A (EXP,ISO) bisphenol F (ISO) butan-1-ol (ISO) cadmium atom (ISO) calcitriol (ISO) cantharidin (ISO) carbon nanotube (ISO) chloroprene (ISO) choline (ISO) cisplatin (ISO) cobalt dichloride (ISO) copper atom (EXP) copper(0) (EXP) copper(II) sulfate (ISO) coumestrol (ISO) crocidolite asbestos (ISO) CU-O LINKAGE (ISO) cyclosporin A (ISO) cypermethrin (ISO) DDE (ISO) decabromodiphenyl ether (EXP) dexamethasone (ISO) diallyl trisulfide (ISO) diethylstilbestrol (EXP) dorsomorphin (ISO) doxorubicin (ISO) endosulfan (EXP) Enterolactone (ISO) folic acid (ISO) formaldehyde (ISO) FR900359 (ISO) fulvestrant (ISO) furan (EXP) genistein (ISO) gentamycin (EXP) hydrogen peroxide (ISO) hydroquinone (ISO) Indeno[1,2,3-cd]pyrene (ISO) indometacin (ISO) isobutanol (ISO) isoprenaline (ISO) L-methionine (ISO) leflunomide (ISO) lidocaine (EXP) lipopolysaccharide (ISO) lucanthone (ISO) menadione (ISO) methimazole (EXP) methyl methanesulfonate (ISO) methylseleninic acid (ISO) N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal (ISO) N-methyl-N-nitrosourea (ISO) N-nitrosodiethylamine (ISO) N-Nitrosopyrrolidine (ISO) niclosamide (ISO) O-methyleugenol (ISO) ozone (ISO) palbociclib (ISO) paracetamol (EXP,ISO) parathion (ISO) perfluorononanoic acid (ISO) phenobarbital (ISO) phenylmercury acetate (ISO) pirinixic acid (ISO) piroxicam (ISO) potassium chromate (ISO) pregnenolone 16alpha-carbonitrile (EXP) progesterone (ISO) propanal (ISO) quercetin (ISO) raloxifene (ISO) resveratrol (ISO) SB 431542 (ISO) silicon dioxide (ISO) silver atom (ISO) silver(0) (ISO) sodium arsenite (ISO) sulfadimethoxine (EXP) sunitinib (ISO) tamoxifen (ISO) tert-butyl hydroperoxide (ISO) testosterone (EXP,ISO) tetrachloromethane (ISO) thalidomide (ISO) thapsigargin (ISO) thioacetamide (EXP) thiram (ISO) titanium dioxide (ISO) trichloroethene (EXP) trimellitic anhydride (ISO) triptonide (ISO) troglitazone (ISO) trovafloxacin (ISO) tungsten (ISO) tunicamycin (ISO) valproic acid (ISO) vincaleukoblastine (ISO) zoledronic acid (ISO)
Cenpa Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 6 31,420,062 - 31,431,703 (-) NCBI GRCr8 mRatBN7.2 6 25,700,142 - 25,711,767 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 6 25,700,142 - 25,711,675 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 6 26,004,502 - 26,011,743 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 6 26,320,374 - 26,327,620 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 6 25,800,027 - 25,807,259 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 6 27,072,259 - 27,080,863 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 6 27,072,166 - 27,080,856 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 6 36,887,831 - 36,896,429 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 6 25,686,603 - 25,693,840 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 6 25,193,302 - 25,201,670 (-) NCBI Celera Cytogenetic Map 6 q14 NCBI
CENPA Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 2 26,786,056 - 26,794,589 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 2 26,764,289 - 26,801,067 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 2 27,008,924 - 27,017,457 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 2 26,862,386 - 26,870,961 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 2 26,920,571 - 26,929,105 NCBI Celera 2 26,854,943 - 26,863,518 (+) NCBI Celera Cytogenetic Map 2 p23.3 NCBI HuRef 2 26,750,612 - 26,759,190 (+) NCBI HuRef CHM1_1 2 26,938,614 - 26,947,189 (+) NCBI CHM1_1 T2T-CHM13v2.0 2 26,827,645 - 26,836,182 (+) NCBI T2T-CHM13v2.0
Cenpa Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 5 30,824,214 - 30,832,181 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 5 30,824,121 - 30,832,174 (+) Ensembl GRCm39 Ensembl GRCm38 5 30,666,877 - 30,674,837 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 5 30,666,777 - 30,674,830 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 5 30,969,275 - 30,977,199 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 5 30,943,483 - 30,951,407 (+) NCBI MGSCv36 mm8 Celera 5 28,145,648 - 28,153,572 (+) NCBI Celera Cytogenetic Map 5 B1 NCBI cM Map 5 16.76 NCBI
Cenpa Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955469 8,799,071 - 8,819,876 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955469 8,799,312 - 8,819,637 (+) NCBI ChiLan1.0 ChiLan1.0
CENPA Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 12 99,713,881 - 99,728,841 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 2A 99,717,857 - 99,732,808 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 2A 26,785,301 - 26,800,178 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3
CENPA Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 17 20,808,320 - 20,833,747 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 17 20,811,663 - 20,819,568 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 17 20,705,452 - 20,727,630 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 17 21,132,793 - 21,155,222 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 17 21,132,865 - 21,141,662 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 17 20,819,646 - 20,841,970 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 17 20,831,002 - 20,853,359 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 17 20,877,019 - 20,899,384 (+) NCBI UU_Cfam_GSD_1.0
Cenpa Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024406292 65,118,691 - 65,128,436 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936493 5,714,782 - 5,720,837 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936493 5,715,274 - 5,720,816 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
CENPA Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 3 112,263,915 - 112,272,621 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 3 112,263,912 - 112,272,638 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 3 119,263,793 - 119,272,512 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
CENPA Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 14 80,838,049 - 80,847,609 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 14 80,839,335 - 80,846,608 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666045 31,298,072 - 31,307,015 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Cenpa
.
Predicted Target Of
Count of predictions: 375 Count of miRNA genes: 218 Interacting mature miRNAs: 253 Transcripts: ENSRNOT00000012512 Prediction methods: Microtar, Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
8552962 Pigfal16 Plasma insulin-like growth factor 1 level QTL 16 9.4 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 6 1 41223769 Rat 1549905 Stresp10 Stress response QTL 10 6.83 0.0066 stress-related behavior trait (VT:0010451) number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960) 6 1 27574569 Rat 10401812 Kidm54 Kidney mass QTL 54 kidney mass (VT:0002707) both kidneys wet weight (CMO:0000085) 6 14368788 59368788 Rat 1331743 Uae28 Urinary albumin excretion QTL 28 4.5 urine albumin amount (VT:0002871) urine albumin level (CMO:0000130) 6 1 34235784 Rat 2292589 Emca10 Estrogen-induced mammary cancer QTL 10 0.048 mammary gland integrity trait (VT:0010552) post-insult time to mammary tumor formation (CMO:0000345) 6 16536140 61536140 Rat 10401800 Kidm49 Kidney mass QTL 49 kidney mass (VT:0002707) both kidneys wet weight (CMO:0000085) 6 14368788 59368788 Rat 1300164 Rf15 Renal function QTL 15 3.12 renal blood flow trait (VT:2000006) absolute change in renal blood flow rate (CMO:0001168) 6 5074497 54641141 Rat 9589129 Insul24 Insulin level QTL 24 19.06 0.001 blood insulin amount (VT:0001560) plasma insulin level (CMO:0000342) 6 1 41223769 Rat 1578758 Tcas9 Tongue tumor susceptibility QTL 9 3.29 tongue integrity trait (VT:0010553) number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950) 6 1 37618905 Rat 4145119 Mcs25 Mammary carcinoma susceptibility QTL 25 0.0001 mammary gland integrity trait (VT:0010552) ratio of deaths to total study population during a period of time (CMO:0001023) 6 10894415 110548006 Rat 7411603 Foco13 Food consumption QTL 13 5.5 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 6 1 41223769 Rat 1598843 Cm63 Cardiac mass QTL 63 2.6 heart mass (VT:0007028) heart weight to body weight ratio (CMO:0000074) 6 1 39036266 Rat 738024 Sach5 Saccharine consumption QTL 5 3.9 0.00039 consumption behavior trait (VT:0002069) saccharin intake volume to total fluid intake volume ratio (CMO:0001601) 6 1 43394190 Rat 7411542 Bw127 Body weight QTL 127 5.5 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 6 1 41223769 Rat 9589048 Scfw3 Subcutaneous fat weight QTL 3 4.57 0.001 subcutaneous adipose mass (VT:1000472) abdominal subcutaneous fat pad weight (CMO:0002069) 6 1 41223769 Rat 738023 Alc17 Alcohol consumption QTL 17 3.1 0.003 consumption behavior trait (VT:0002069) ethanol drink intake rate to body weight ratio (CMO:0001616) 6 1 27574569 Rat 1354616 Despr12 Despair related QTL 12 0.0012 locomotor behavior trait (VT:0001392) amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) 6 1 27574569 Rat 2293839 Kiddil2 Kidney dilation QTL 2 4.8 kidney pelvis morphology trait (VT:0004194) hydronephrosis severity score (CMO:0001208) 6 20866422 81133036 Rat 1576309 Emca7 Estrogen-induced mammary cancer QTL 7 4 mammary gland integrity trait (VT:0010552) mammary tumor number (CMO:0000343) 6 15107216 107351382 Rat 2293709 Bss23 Bone structure and strength QTL 23 5.18 0.0001 femur morphology trait (VT:0000559) femur cross-sectional area (CMO:0001661) 6 1 42487980 Rat 2293650 Bss31 Bone structure and strength QTL 31 5.05 0.0001 femur strength trait (VT:0010010) femur midshaft polar moment of inertia (CMO:0001669) 6 1 42487980 Rat 7411584 Foco4 Food consumption QTL 4 4.3 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 6 1 42838846 Rat 1578665 Bss16 Bone structure and strength QTL 16 4.4 femur morphology trait (VT:0000559) bone trabecular cross-sectional area (CMO:0002311) 6 11735669 72593685 Rat 2293841 Kiddil4 Kidney dilation QTL 4 4.4 kidney pelvis morphology trait (VT:0004194) hydronephrosis severity score (CMO:0001208) 6 20866422 81133036 Rat 2300176 Bmd51 Bone mineral density QTL 51 11.7 0.0001 femur mineral mass (VT:0010011) bone mineral density (CMO:0001226) 6 1 27574569 Rat 1300128 Rf16 Renal function QTL 16 3.89 renal blood flow trait (VT:2000006) absolute change in renal blood flow rate (CMO:0001168) 6 5074497 34434305 Rat 1641898 Colcr4 Colorectal carcinoma resistance QTL4 3.71 0.0007 intestine integrity trait (VT:0010554) well differentiated malignant colorectal tumor surface area measurement (CMO:0002077) 6 20338777 62613667 Rat 1578668 Bmd14 Bone mineral density QTL 14 3.8 femur mineral mass (VT:0010011) total volumetric bone mineral density (CMO:0001728) 6 11735669 72593685 Rat 2301972 Bp325 Blood pressure QTL 325 4.8 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 6 1 72227641 Rat 2293656 Bss28 Bone structure and strength QTL 28 6.79 0.0001 femur morphology trait (VT:0000559) femur midshaft cortical cross-sectional area (CMO:0001663) 6 1 42487980 Rat 1359023 Bp272 Blood pressure QTL 272 2.5 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 6 16536140 27261739 Rat 1354664 Slep2 Serum leptin concentration QTL 2 4.49 blood leptin amount (VT:0005667) serum leptin level (CMO:0000780) 6 16536140 71636405 Rat 2300190 Bmd52 Bone mineral density QTL 52 11.2 0.0001 femur mineral mass (VT:0010011) volumetric bone mineral density (CMO:0001553) 6 1 27574569 Rat
RH143311
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 6 25,704,671 - 25,704,777 (+) MAPPER mRatBN7.2 Rnor_6.0 6 28,306,143 - 28,306,248 NCBI Rnor6.0 Rnor_6.0 6 27,073,542 - 27,073,647 NCBI Rnor6.0 Rnor_5.0 6 38,115,420 - 38,115,525 UniSTS Rnor5.0 Rnor_5.0 6 36,889,111 - 36,889,216 UniSTS Rnor5.0 RGSC_v3.4 6 25,686,883 - 25,686,988 UniSTS RGSC3.4 Celera 6 25,194,585 - 25,194,690 UniSTS RH 3.4 Map 6 116.2 UniSTS Cytogenetic Map 6 q14 UniSTS
AI045252
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 6 25,704,597 - 25,704,746 (+) MAPPER mRatBN7.2 Rnor_6.0 6 28,306,069 - 28,306,217 NCBI Rnor6.0 Rnor_6.0 6 27,073,468 - 27,073,616 NCBI Rnor6.0 Rnor_5.0 6 38,115,346 - 38,115,494 UniSTS Rnor5.0 Rnor_5.0 6 36,889,037 - 36,889,185 UniSTS Rnor5.0 RGSC_v3.4 6 25,686,809 - 25,686,957 UniSTS RGSC3.4 Celera 6 25,194,511 - 25,194,659 UniSTS RH 3.4 Map 6 116.5 UniSTS Cytogenetic Map 6 q14 UniSTS
RH141436
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 6 25,704,880 - 25,705,030 (+) MAPPER mRatBN7.2 Rnor_6.0 6 28,306,352 - 28,306,501 NCBI Rnor6.0 Rnor_6.0 6 27,073,751 - 27,073,900 NCBI Rnor6.0 Rnor_5.0 6 38,115,629 - 38,115,778 UniSTS Rnor5.0 Rnor_5.0 6 36,889,320 - 36,889,469 UniSTS Rnor5.0 RGSC_v3.4 6 25,687,092 - 25,687,241 UniSTS RGSC3.4 Celera 6 25,194,794 - 25,194,943 UniSTS RH 3.4 Map 6 96.2 UniSTS Cytogenetic Map 6 q14 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
10
49
112
91
90
59
25
59
6
217
97
92
45
60
31
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Ensembl Acc Id:
ENSRNOT00000012512 ⟹ ENSRNOP00000012512
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 6 25,700,142 - 25,711,675 (-) Ensembl Rnor_6.0 Ensembl 6 27,072,166 - 27,080,856 (-) Ensembl
Ensembl Acc Id:
ENSRNOT00000117984 ⟹ ENSRNOP00000083188
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 6 25,700,142 - 25,711,622 (-) Ensembl
RefSeq Acc Id:
NM_001106711 ⟹ NP_001100181
RefSeq Status:
PROVISIONAL
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 6 31,424,312 - 31,431,552 (-) NCBI mRatBN7.2 6 25,704,392 - 25,711,638 (-) NCBI Rnor_6.0 6 27,073,262 - 27,080,738 (-) NCBI Rnor_5.0 6 36,887,831 - 36,896,429 (-) NCBI RGSC_v3.4 6 25,686,603 - 25,693,840 (-) RGD
Sequence:
ACCCTCGCGTCCAGCCATGGTCGGGCGCCGCAAGCCAGGGACCCCGAGGAGGCGACCCTCTAGTCCGGCGCCCGGACCCTCTCAGCCAGCCACGGACTCGCGTCGCCAGTCGAGGACTCCGACGAGGC
hide sequence
RefSeq Acc Id:
XM_006239798 ⟹ XP_006239860
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 6 31,420,062 - 31,431,703 (-) NCBI mRatBN7.2 6 25,700,333 - 25,711,765 (-) NCBI Rnor_6.0 6 27,072,259 - 27,080,861 (-) NCBI Rnor_5.0 6 36,887,831 - 36,896,429 (-) NCBI
Sequence:
TCTGATTTTTGAACTACTGGCGGCGGAGATCCGGCGTCCCTGACTCGGGCACGGTAGGCTTGCT
hide sequence
RefSeq Acc Id:
XM_017594068 ⟹ XP_017449557
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 6 31,423,307 - 31,431,703 (-) NCBI mRatBN7.2 6 25,700,142 - 25,711,767 (-) NCBI Rnor_6.0 6 27,072,259 - 27,080,863 (-) NCBI
Sequence:
CGTCTGATTTTTGAACTACTGGCGGCGGAGATCCGGCGTCCCTGACTCGGGCACGGTAGGCTTG
hide sequence
RefSeq Acc Id:
NP_001100181 ⟸ NM_001106711
- UniProtKB:
B2RZ23 (UniProtKB/TrEMBL), A6HAC7 (UniProtKB/TrEMBL), F7EQM2 (UniProtKB/TrEMBL)
- Sequence:
MVGRRKPGTPRRRPSSPAPGPSQPATDSRRQSRTPTRRPSSPAPGPSRRSSGVGPQALHRRRRFLWLKEIKNLQKSTDLLFRKKPFGLVVREICGKFSRGVDLYWQAQALLALQEAAEAFLVHLFEDA
hide sequence
RefSeq Acc Id:
XP_006239860 ⟸ XM_006239798
- Peptide Label:
isoform X1
- UniProtKB:
B2RZ23 (UniProtKB/TrEMBL), A6HAC7 (UniProtKB/TrEMBL), F7EQM2 (UniProtKB/TrEMBL)
- Sequence:
MVGRRKPGTPRRRPSSPAPGPSQPATDSRRQSRTPTRRPSSPAPGPSRRSSGVGPQALHRRRRF
hide sequence
RefSeq Acc Id:
XP_017449557 ⟸ XM_017594068
- Peptide Label:
isoform X2
- UniProtKB:
A6HAC8 (UniProtKB/TrEMBL)
- Sequence:
MVGRRKPGTPRRRPSSPAPGPSQPATDSRRQSRTPTRRPSSPAPGPSRRSSGVGPQALHRRRRFLWLKEIKNLQKSTDLLFRKKPFGLVVREICGKFSRGVDLYWQAQALLALQETIPGIFWSCSQTA
hide sequence
Ensembl Acc Id:
ENSRNOP00000012512 ⟸ ENSRNOT00000012512
Ensembl Acc Id:
ENSRNOP00000083188 ⟸ ENSRNOT00000117984
RGD ID: 13694462 Promoter ID: EPDNEW_R4985 Type: initiation region Name: Cenpa_1 Description: centromere protein A SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Experiment Methods: Single-end sequencing. Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 6 27,080,820 - 27,080,880 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2008-03-06
Cenpa
centromere protein A
RGD1563607_predicted
similar to centromere protein A (predicted)
Nomenclature updated to reflect human and mouse nomenclature
1299863 APPROVED
2006-03-07
RGD1563607_predicted
similar to centromere protein A (predicted)
LOC298850
similar to centromere protein A
Symbol and Name status set to approved
1299863 APPROVED
2006-02-09
LOC298850
similar to centromere protein A
Symbol and Name status set to provisional
70820 PROVISIONAL
