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Gene: Celf3 (CUGBP, Elav-like family member 3) Rattus norvegicus

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Symbol:

Celf3

Name:

CUGBP, Elav-like family member 3

RGD ID:

1563168

Description:

Predicted to enable 7SK snRNA binding activity and mRNA binding activity. Predicted to be involved in mRNA splice site recognition; positive regulation of mRNA splicing, via spliceosome; and regulation of alternative mRNA splicing, via spliceosome. Predicted to act upstream of or within several processes, including flagellated sperm motility; lncRNA transcription; and nuclear body organization. Predicted to be located in nuclear body. Predicted to be part of ribonucleoprotein complex. Predicted to be active in cytoplasm and nucleus. Orthologous to human CELF3 (CUGBP Elav-like family member 3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3,3',4,4',5-pentachlorobiphenyl; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

CUG-BP- and ETR-3-like factor 3; CUGBP Elav-like family member 3; LOC499669; RGD1563168; similar to trinucleotide repeat containing 4; Tnrc4; trinucleotide repeat containing 4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CELF3 (CUGBP Elav-like family member 3)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Celf3 (CUGBP, Elav-like family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Celf3 (CUGBP Elav-like family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CELF3 (CUGBP Elav-like family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CELF3 (CUGBP Elav-like family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Celf3 (CUGBP Elav-like family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CELF3 (CUGBP Elav-like family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CELF3 (CUGBP Elav-like family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Celf3 (CUGBP Elav-like family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Celf3 (CUGBP Elav-like family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	CELF3 (CUGBP Elav-like family member 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Celf3 (CUGBP, Elav-like family member 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Celf3 (CUGBP, Elav-like family member 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	celf3a (cugbp, Elav-like family member 3a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	celf3a (cugbp, Elav-like family member 3a)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	celf3b (cugbp, Elav-like family member 3b)	Alliance	DIOPT (Hieranoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	bru3	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	unc-75	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	unc-75	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoInspector\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	celf3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	celf5	Alliance	DIOPT (InParanoid\|OrthoInspector\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	184,805,078 - 184,819,189 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	184,805,081 - 184,819,187 (+)	Ensembl				GRCr8
mRatBN7.2	2	182,116,034 - 182,130,163 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	182,116,073 - 182,130,163 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	189,779,026 - 189,793,161 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	187,583,466 - 187,597,543 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	182,411,492 - 182,425,629 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	195,716,373 - 195,732,872 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	195,719,543 - 195,730,274 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	215,197,348 - 215,211,497 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	189,451,415 - 189,465,513 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	174,666,732 - 174,680,566 (+)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

neuromuscular disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2-methylcholine (ISO)

3,3',4,4',5-pentachlorobiphenyl (EXP)

3,3',5,5'-tetrabromobisphenol A (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

aldehydo-D-glucose (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

CGP 52608 (ISO)

cytarabine (ISO)

D-glucose (ISO)

dimethylselenide (ISO)

ethanol (ISO)

folic acid (ISO)

fructose (ISO)

furan (EXP)

genistein (ISO)

glucose (ISO)

glycidol (EXP)

glyphosate (ISO)

maneb (ISO)

methimazole (EXP)

methotrexate (ISO)

paracetamol (ISO)

paraquat (ISO)

pentanal (ISO)

reactive oxygen species (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

testosterone (ISO)

titanium dioxide (ISO)

triptonide (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

flagellated sperm motility (ISO)

gene expression (IEA)

lncRNA transcription (ISO)

mRNA processing (IEA)

mRNA splice site recognition (IBA)

nuclear body organization (ISO)

positive regulation of mRNA splicing, via spliceosome (IEA,ISO)

regulation of alternative mRNA splicing, via spliceosome (IBA,IEA,ISO)

RNA splicing (IEA,ISO)

spermatogenesis (ISO)

Cellular Component

cytoplasm (IBA,IEA,ISO)

nuclear body (IEA,ISO)

nucleus (IBA,IEA,ISO)

ribonucleoprotein complex (IBA)

Molecular Function

7SK snRNA binding (IEA,ISO)

mRNA binding (IBA)

nucleic acid binding (IEA)

protein binding (ISO)

RNA binding (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
3.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:11158314	PMID:15009664	PMID:17393433	PMID:17725984	PMID:25145264

Genomics

Comparative Map Data

Celf3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	184,805,078 - 184,819,189 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	184,805,081 - 184,819,187 (+)	Ensembl				GRCr8
mRatBN7.2	2	182,116,034 - 182,130,163 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	182,116,073 - 182,130,163 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	189,779,026 - 189,793,161 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	187,583,466 - 187,597,543 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	182,411,492 - 182,425,629 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	195,716,373 - 195,732,872 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	195,719,543 - 195,730,274 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	215,197,348 - 215,211,497 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	189,451,415 - 189,465,513 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	174,666,732 - 174,680,566 (+)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

CELF3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	151,700,058 - 151,716,803 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	151,700,058 - 151,716,803 (-)	Ensembl			hg38	GRCh38
GRCh37	1	151,672,534 - 151,689,279 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	149,941,454 - 149,955,914 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	1	148,487,953 - 148,502,363	NCBI
Celera	1	124,787,166 - 124,803,919 (-)	NCBI		Celera
Cytogenetic Map	1	q21.3	NCBI
HuRef	1	123,049,496 - 123,066,254 (-)	NCBI		HuRef
CHM1_1	1	153,067,695 - 153,084,451 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	150,823,442 - 150,840,189 (-)	NCBI		T2T-CHM13v2.0

Celf3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	94,385,581 - 94,405,822 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	94,385,602 - 94,399,505 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	3	94,478,285 - 94,496,786 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	94,478,295 - 94,492,198 (+)	Ensembl			mm10	GRCm38
MGSCv37	3	94,282,753 - 94,296,115 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	3	94,564,235 - 94,577,597 (+)	NCBI		MGSCv36	mm8
Celera	3	95,925,028 - 95,938,402 (+)	NCBI		Celera
Cytogenetic Map	3	F2.1	NCBI
cM Map	3	40.73	NCBI

Celf3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955589	701,767 - 713,179 (+)	Ensembl
ChiLan1.0	NW_004955589	700,965 - 715,684 (+)	NCBI	ChiLan1.0	ChiLan1.0

CELF3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	98,107,577 - 98,124,386 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	97,858,735 - 97,875,843 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	127,060,330 - 127,075,106 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	130,701,452 - 130,718,578 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	130,701,452 - 130,718,578 (-)	Ensembl			panPan2	panpan1.1

CELF3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	60,733,148 - 60,747,553 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	60,735,628 - 60,746,615 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	60,174,873 - 60,189,075 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	61,749,613 - 61,763,823 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	61,752,073 - 61,763,048 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	60,576,812 - 60,591,015 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	60,662,591 - 60,676,818 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	61,391,973 - 61,406,225 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Celf3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	22,867,312 - 22,881,439 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936580	1,899,877 - 1,911,348 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936580	1,897,694 - 1,911,817 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CELF3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	97,514,224 - 97,528,481 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	4	97,513,563 - 97,535,426 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	106,757,592 - 106,772,378 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CELF3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	11,973,531 - 11,988,560 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	11,981,181 - 11,992,302 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666038	11,543,399 - 11,558,337 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Celf3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624772	19,387,827 - 19,403,094 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624772	19,389,147 - 19,403,100 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Celf3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	3	62,684,735 - 62,699,074 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Celf3
56 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	155
Count of miRNA genes:	97
Interacting mature miRNAs:	124
Transcripts:	ENSRNOT00000028324
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1358356	Srcrt1	Stress Responsive Cort QTL1	3.66		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	2	163997722	225110681	Rat
1578648	Bss11	Bone structure and strength QTL 11	4.7		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	2	169358774	214358774	Rat
1331734	Bp204	Blood pressure QTL 204	3.61192		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	170656145	239614549	Rat
631566	Bp90	Blood pressure QTL 90		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	149957381	221199885	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	44537979	205135428	Rat
1354648	Bp239	Blood pressure QTL 239		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	67845370	229470703	Rat
1354649	Kidm17	Kidney mass QTL 17	2.9		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	2	83465462	229820014	Rat
10755499	Bp389	Blood pressure QTL 389	2.61		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	20695736	231474293	Rat
1298076	Bp166	Blood pressure QTL 166		0.0009	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	138595962	205135428	Rat
1581576	Pur7	Proteinuria QTL 7		0.0001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	2	80396178	220931218	Rat
152025245	Scl81	Serum cholesterol level QTL 81	3.49		blood cholesterol amount (VT:0000180)		2	124537199	209621565	Rat
1581578	Cm49	Cardiac mass QTL 49	4.9	0.01	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	145807215	220931416	Rat
631198	Cm22	Cardiac mass QTL 22	4.3	0.0008	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	78269809	208420281	Rat
1554319	Bmd2	Bone mineral density QTL 2	13.4	0.0001	lumbar vertebra area (VT:0010570)	lumbar vertebra cross-sectional area (CMO:0001689)	2	122597372	215234002	Rat
12879836	Kidm61	Kidney mass QTL 61		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	154723085	199723085	Rat
1581569	Uae32	Urinary albumin excretion QTL 32		0.0001	urine protein amount (VT:0005160)	urine albumin excretion rate (CMO:0000757)	2	80396178	220931218	Rat
10043136	Iddm54	Insulin dependent diabetes mellitus QTL 54	3.4	0.0001	blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	145807215	190807215	Rat
12879837	Am2	Aortic mass QTL 2		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	2	154723085	199723085	Rat
10043139	Iddm55	Insulin dependent diabetes mellitus QTL 55	3.1	0.0001	blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	150313808	195313808	Rat
12879838	Cm86	Cardiac mass QTL 86		0.002	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	154723085	199723085	Rat
1302793	Bw16	Body weight QTL 16	5	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	2	159440891	205135267	Rat
12879839	Cm85	Cardiac mass QTL 85		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	2	154723085	199723085	Rat
1549833	Bp257	Blood pressure QTL 257		0.003	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	170652929	215652929	Rat
1358900	Bw48	Body weight QTL 48	4.88		body mass (VT:0001259)	body weight (CMO:0000012)	2	159440891	220931218	Rat
4889834	Pur24	Proteinuria QTL 24	5.8	0.014	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	2	171994826	205135428	Rat
1359030	Bp277	Blood pressure QTL 277			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	143565208	188565208	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	4265106	205135428	Rat
12879840	Bw179	Body weight QTL 179		0.005	body mass (VT:0001259)	body weight (CMO:0000012)	2	154723085	199723085	Rat
1581502	Esta3	Estrogen-induced thymic atrophy QTL 3			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	2	139067258	192287892	Rat
1359032	Hrtrt18	Heart rate QTL 18			heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	2	159440760	195313808	Rat
2301966	Bp322	Blood pressure QTL 322	3.58		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	144882354	205135428	Rat
1298080	Bp163	Blood pressure QTL 163		0.02	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	67845182	205135428	Rat
1357991	Ael2	Aortic elastin QTL 2	4.2	0.000071	aorta elastin amount (VT:0003905)	aortic elastin	2	169227906	214227906	Rat
8662832	Vetf7	Vascular elastic tissue fragility QTL 7	3.5		aorta elastin amount (VT:0003905)	aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)	2	83400752	223709938	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	44537979	205135428	Rat
1578671	Bmd10	Bone mineral density QTL 10	5.4		femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	2	175931416	220931416	Rat
1641891	Alcrsp17	Alcohol response QTL 17			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	151869660	251712708	Rat
724534	Uae6	Urinary albumin excretion QTL 6	10		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	2	80396034	220931416	Rat
61374	Edpm2	Estrogen-dependent pituitary mass QTL 2	4.42	0.86	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	78269809	205135428	Rat
2300189	Bmd48	Bone mineral density QTL 48	5.8	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	2	182024327	227024327	Rat
8662843	Vetf9	Vascular elastic tissue fragility QTL 9	2.05		thoracic aorta molecular composition trait (VT:0010568)	aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)	2	159440760	228950743	Rat
2301408	Kidm36	Kidney mass QTL 36		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	184482291	229482291	Rat
1331794	Bp202	Blood pressure QTL 202	3.66819		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	143344967	251712708	Rat
71113	Cari2	Carrageenan-induced inflammation QTL 2	2.7	0.009	hypodermis integrity trait (VT:0010550)	inflammatory exudate volume (CMO:0001429)	2	143746578	205135428	Rat
1331805	Cm29	Cardiac mass QTL 29	3.50746		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	2	143344967	251712708	Rat
634308	Sach6	Saccharin preference QTL 6	4.9		taste sensitivity trait (VT:0001986)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	2	114384617	215381366	Rat
1598805	Memor8	Memory QTL 8	3		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	2	150096616	195096616	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
724568	Uae13	Urinary albumin excretion QTL 13	4.4		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	2	145306936	212705578	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
1300165	Rf9	Renal function QTL 9	3.28		kidney glomerulus integrity trait (VT:0010546)	index of glomerular damage (CMO:0001135)	2	113746222	205135428	Rat
61401	Niddm2	Non-insulin dependent diabetes mellitus QTL 2	4.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	2	147287892	192287892	Rat
631507	Bp105	Blood pressure QTL 105		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	114384617	215381366	Rat
1641925	Alcrsp2	Alcohol response QTL 2			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	151869660	223841096	Rat
1354609	Niddm62	Non-insulin dependent diabetes mellitus QTL 62	4.72	0.000006	insulin secretion trait (VT:0003564)	plasma insulin level (CMO:0000342)	2	117415288	205135428	Rat
1598833	Bp295	Blood pressure QTL 295	3.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	150096616	195096616	Rat
61417	Cia10	Collagen induced arthritis QTL 10	3.4		joint integrity trait (VT:0010548)	experimental arthritis severity measurement (CMO:0001459)	2	182635347	227635347	Rat
1354622	Kidm16	Kidney mass QTL 16	3		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	2	83465462	225110681	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	47856345	205135428	Rat
631522	Bp74	Blood pressure QTL 74		0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	175008837	220008837	Rat
7488927	Bp365	Blood pressure QTL 365		0.008	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	165453811	210453811	Rat
7488925	Bp364	Blood pressure QTL 364		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	163253030	208253030	Rat
2306901	Bp337	Blood pressure QTL 337		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	166372086	229820014	Rat
1354605	Rf48	Renal function QTL 48	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	2	76328396	209350714	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	61	160	83	82	51	84	51	6	323	178	11	138	70	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001109190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232898	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232900	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232902	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232903	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232904	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232905	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232907	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232908	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232911	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232912	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761322	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761325	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591041	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102915	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102932	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282378	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282379	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282380	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282381	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282382	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282383	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282384	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282385	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282386	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282387	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282388	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282389	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282390	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282391	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282392	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282393	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282394	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282395	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282397	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282398	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282401	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010063644	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010063645	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010063646	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010063647	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010063648	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010063649	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010063650	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010063651	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010063652	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010063653	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC133978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000028324 ⟹ ENSRNOP00000028324

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	184,811,860 - 184,819,187 (+)	Ensembl
mRatBN7.2 Ensembl	2	182,122,834 - 182,130,156 (+)	Ensembl
Rnor_6.0 Ensembl	2	195,719,543 - 195,730,274 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000115671 ⟹ ENSRNOP00000092441

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	184,805,081 - 184,819,187 (+)	Ensembl
mRatBN7.2 Ensembl	2	182,116,073 - 182,130,163 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000145844 ⟹ ENSRNOP00000111046

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	184,805,081 - 184,819,187 (+)	Ensembl

RefSeq Acc Id:

NM_001109190 ⟹ NP_001102660

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,091 - 184,819,189 (+)	NCBI
mRatBN7.2	2	182,116,064 - 182,130,163 (+)	NCBI
Rnor_6.0	2	195,718,774 - 195,732,872 (+)	NCBI
Rnor_5.0	2	215,197,348 - 215,211,497 (+)	NCBI
RGSC_v3.4	2	189,451,415 - 189,465,513 (+)	RGD
Celera	2	174,666,732 - 174,680,566 (+)	RGD

Sequence:

show sequence

GTTTTTGTTGAGGAGAGCGCGTCCGGAGAGCAGAGCTCCGGGACCCAGGTGACCGGGAAAGCAG
GCAGCCCTAGTGTCGGGAGTAGCCCGCAGCAGCCCAAGCGGGGGAACCATACAGGGTGGGGGTG
GGAGGGGGGGGGTCAAGGGAGAACTTGAAGGGGGCAGGGCAGAAGGGACCCCCGGAACCCTGCC
GCCATCAGAGATCAAGCATTTGGCATCAGGGATCTTCGGACCCAGCAAAAGGATCAGCCACAAG
GGAGGTGTCCTCCCTAGGAAGCCAACGAGAGAGTCACCTGCCCCACATCAGGAGCAGGGACCCC
CTCATGACGCTGCTGGCAACTATAGCAGGCCCCTAGCCCCTCAGCCTCCTTCCTATCTCCTTCT
TCTGACTCTTATTCCATCTCCTTTGGCATTTGTGCCTTTGCTCCCCGCCCTCTGAGCTCCAGCT
ACCACCCAAACGCCCCAGGGCTTGGCTGCCCTGACCCTCATCCTGGAATATTTGCCAGATCTCT
GGGAGGGAGATCCTTTGCTTGGGCTATGCCCCCTGGGGGTCTGACAGTGTCTGCCTAGACCCCT
GACCCCTAGCCCTCAACTCCCCACGACTCCTTTGTGTGAAGAGCCCTCCTCTGCTCAGCACTGT
GGTTGGGGGCCAAAGGGAAAGCCGGCCCTGCTGGGCCCCTGGGCCCTACCACCTGCCTCCTGGT
TGGGCAGCTTCCCTTGTCTTTGGGCCTCTCCCTGTTCCCCCGGCCCCTCCTCCTGGGCCGCCCC
AATGAAGGAGCCGGATGCCATCAAGCTGTTTGTGGGGCAGATCCCGAGGCATCTGGAGGAAAAG
GACCTGAAGCCCATCTTCGAGCAGTTTGGTCGGATCTTCGAGCTGACTGTCATCAAGGACAAGT
ACACCGGGCTGCACAAGGGATGTGCTTTCCTGACGTACTGTGCTCGCGATTCAGCCCTGAAGGC
CCAGAGTGCCCTGCACGAACAGAAGACTCTCCCAGGGATGAACAGGCCGATCCAGGTCAAGCCA
GCCGACAGCGAGAGTCGAGGAGAAGACCGGAAGCTCTTTGTGGGGATGCTAGGAAAGCAGCAGA
CAGATGAGGATGTCCGGAAGATGTTTGAACCGTTTGGGACTATAGACGAGTGCACTGTGCTCCG
GGGGCCAGACGGGACCAGCAAAGGCTGTGCCTTTGTGAAGTTCCAGACTCATGCTGAGGCCCAG
GCAGCCATTAACACTCTTCACAGCAGCCGGACTCTACCGGGTGCCTCATCCAGCCTGGTGGTAA
AGTTTGCTGACACAGAGAAGGAGCGAGGTCTCCGCCGGATGCAGCAGGTGGCTACCCAGCTGGG
CATGTTCAGCCCTATCGCCCTCCAGTTTGGAGCCTACAGCGCCTACACCCAGGCCCTGATGCAG
CAGCAGGCGGCCCTGGTAGCAGCTCACAGTGCCTACCTCAGCCCTATGGCCACCATGGCTGCCG
TGCAGATGCAGCACATGGCTGCCATCAATGCCAATGGCCTCATCGCCACCCCCATCACTCCATC
CTCAGGAACCAGCACCCCTCCTGCCATTGCTGCCACGCCGGTCTCTGCCATTCCTGCTGCCTTG
GGCGTCAACGGCTACAGCCCAGTGCCCACCCAGCCCACGGGGCAGCCTGCCCCTGATGCTCTCT
ATCCCAACGGGGTTCACCCTTACCCAGCCCAGAGCCCTGCAGCCCCTGTGGACCCTCTCCAGCA
GGCCTACGCAGGAATGCAGCACTACACAGCAGCCTACCCTGCAGCCTACAGCCTGGTTGCACCT
GCGTTCCCGCAGCCTCCAGCCCTGGTCGCCCAGCAGCCCCCACCACCACCTCAGCAGCAACAGC
AGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCGGGAAGG
CCCTGATGGCTGTAACATCTTCATCTACCACCTGCCCCAGGAGTTCACAGACTCCGAGATCCTC
CAGATGTTTGTCCCTTTTGGTCATGTCATCTCAGCCAAAGTCTTTGTTGACCGGGCCACCAATC
AGAGCAAATGTTTTGGCTTTGTGAGTTTCGACAATCCGGCCAGTGCCCAGGCTGCCATCCAGGC
TATGAACGGTTTCCAGATTGGCATGAAGCGCCTCAAAGTCCAGCTAAAGCGGCCTAAGGATGCA
AACAGACCCTACTAAGGGCTTCAGGTCTGGAGATACCAGAGGAAGGGGCACTTCGTACCCTCTT
CCTATGACTGGCCCTGGCCTTCTCTGCACATCTGCCCTGGGCCTTGATTGGACTTGGGGCAAAA
GCTGCTTCATGGCCCAAAGGGCCTAGGACCTGGCTCATTCCCACCATCTTGCCTCTCTGGAGGG
CCAGTTTTGCCTCCCTGCCTCCAAGAGCCTATTTCCTCCCCGGTGCCCTTTTGGCCTTTTGTGA
GGAAGTGAGGAATAGGCTTGAAGGTTCAGGGGCATCTGCCTTCTGCTAAGGCTCCTGAGATGAG
CTCTGTAACCACTGTTCACACTTGCCTCCCCTCAGTGGGCCTGAAGTAGCTGTGGAGGCCCAGG
AGGACAGCAGGGCATTCTCTTTCCCAAGCGCCCTCACCTAGCCTCTCCTCCACGGCTCGGCCTT
CTCAGAAGCTGGCTCCCACATTCCCCTCCACCCTCACCTAGAGGTAGGATATCTCCAAATCCCG
GGCTCCCAGCCCTAAAACTCACTGCCTTCCCCAAGGGCCCCCTCCAAGGAGGATGTGGGGGCCC
TGAGGGCTGCCTCTCTGCCAGTCAGTCACAGAGACCCTTTTTTCATGAGGAAAAGACCTTCCCC
TGAATCCCTAAAAATGTTTACAGTCTCTGCTGGCCCTCCATGTAAATACCATGAGCACCAGGGC
ATTAACTAGCCCACCCAGCCAGACGCTGCCATCTCTCTTTCTGAGAGTTTAGACAATGTTACCC
TTGGATTCTTTTTTTTTTTTTTTCCCTCTCTTGATTTTTCTCCCTTTGCTTTGGGGGTAATTGG
GTATTTTGGGGGAAGGGTACCGGGAGGGCTAAAGGGGTTTATTACCTGATCATTTTCTTTAGGA
AGAGGTTTTAGAGAGAAGAACATGGGGTGGGAGTGGGAGGTGAAGGGCGAGAAGGGGAAATCAA
TCTCTGACACTTCTCTACACTTAACTTATTTACTGAGTTTTACTTTTAAAGAGTTGGCCTTTTC
TGTCTAAATAAAGAAAAACATTTGAAAGCATCAA

hide sequence

RefSeq Acc Id:

XM_006232898 ⟹ XP_006232960

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,223 - 184,819,189 (+)	NCBI
mRatBN7.2	2	182,116,185 - 182,130,163 (+)	NCBI
Rnor_6.0	2	195,718,877 - 195,732,872 (+)	NCBI
Rnor_5.0	2	215,197,348 - 215,211,497 (+)	NCBI

Sequence:

show sequence

GGGGGAACCATACAGGGTGGGGGTGGGAGGGGGGGGGTCAAGGGAGAACTTGAAGGGGGCAGGG
CAGAAGGGACCCCCGGAACCCTGCCGCCATCAGAGATCAAGCATTTGGCATCAGGGATCTTCGG
ACCCAGCAAAAGGATCAGCCACAAGGGAGGTGTCCTCCCTAGGAAGCCAACGAGAGAGTCACCT
GCCCCACATCAGGAGCAGGGACCCCCTCATGACGCTGCTGGCAACTATAGCAGGCCCCTAGCCC
CTCAGCCTCCTTCCTATCTCCTTCTTCTGACTCTTATTCCATCTCCTTTGGCATTTGTGCCTTT
GCTCCCCGCCCTCTGAGCTCCAGCTACCACCCAAACGCCCCAGGGCTTGGCTGCCCTGACCCTC
ATCCTGGAATATTTGCCAGATCTCTGGGAGGGAGATCCTTTGCTTGGGCTATGCCCCCTGGGGG
TCTGACAGTGTCTGCCTAGACCCCTGACCCCTAGCCCTCAACTCCCCACGACTCCTTTGTGTGA
AGAGCCCTCCTCTGCTCAGCACTGTGGTTGGGGGCCAAAGGGAAAGCCGGCCCTGCTGGGCCCC
TGGGCCCTACCACCTGCCTCCTGGTTGGGCAGCTTCCCTTGTCTTTGGGCCTCTCCCTGTTCCC
CCGGCCCCTCCTCCTGGGCCGCCCCAATGAAGGAGCCGGATGCCATCAAGCTGTTTGTGGGGCA
GATCCCGAGGCATCTGGAGGAAAAGGACCTGAAGCCCATCTTCGAGCAGTTTGGTCGGATCTTC
GAGCTGACTGTCATCAAGGACAAGTACACCGGGCTGCACAAGGGATGTGCTTTCCTGACGTACT
GTGCTCGCGATTCAGCCCTGAAGGCCCAGAGTGCCCTGCACGAACAGAAGACTCTCCCAGGGAT
GAACAGGCCGATCCAGGTCAAGCCAGCCGACAGCGAGAGTCGAGGAGACCGGAAGCTCTTTGTG
GGGATGCTAGGAAAGCAGCAGACAGATGAGGATGTCCGGAAGATGTTTGAACCGTTTGGGACTA
TAGACGAGTGCACTGTGCTCCGGGGGCCAGACGGGACCAGCAAAGGCTGTGCCTTTGTGAAGTT
CCAGACTCATGCTGAGGCCCAGGCAGCCATTAACACTCTTCACAGCAGCCGGACTCTACCGGGT
GCCTCATCCAGCCTGGTGGTAAAGTTTGCTGACACAGAGAAGGAGCGAGGTCTCCGCCGGATGC
AGCAGGTGGCTACCCAGCTGGGCATGTTCAGCCCTATCGCCCTCCAGTTTGGAGCCTACAGCGC
CTACACCCAGGCCCTGATGCAGCAGCAGGCGGCCCTGGTAGCAGCTCACAGTGCCTACCTCAGC
CCTATGGCCACCATGGCTGCCGTGCAGATGCAGCACATGGCTGCCATCAATGCCAATGGCCTCA
TCGCCACCCCCATCACTCCATCCTCAGGAACCAGCACCCCTCCTGCCATTGCTGCCACGCCGGT
CTCTGCCATTCCTGCTGCCTTGGGCGTCAACGGCTACAGCCCAGTGCCCACCCAGCCCACGGGG
CAGCCTGCCCCTGATGCTCTCTATCCCAACGGGGTTCACCCTTACCCAGACGAGGCTCTGTCTG
CTGAGAGAAGTGCTGGTGAGGCTCCCATTATGCCCCAGACCCACTCATGGCTTGTGATGCTCTC
TGCAGCCCAGAGCCCTGCAGCCCCTGTGGACCCTCTCCAGCAGGCCTACGCAGGAATGCAGCAC
TACACAGCAGCCTACCCTGCAGCCTACAGCCTGGTTGCACCTGCGTTCCCGCAGCCTCCAGCCC
TGGTCGCCCAGCAGCCCCCACCACCACCTCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCA
GCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCGGGAAGGCCCTGATGGCTGTAACATCTTC
ATCTACCACCTGCCCCAGGAGTTCACAGACTCCGAGATCCTCCAGATGTTTGTCCCTTTTGGTC
ATGTCATCTCAGCCAAAGTCTTTGTTGACCGGGCCACCAATCAGAGCAAATGTTTTGGCTTTGT
GAGTTTCGACAATCCGGCCAGTGCCCAGGCTGCCATCCAGGCTATGAACGGTTTCCAGATTGGC
ATGAAGCGCCTCAAAGTCCAGCTAAAGCGGCCTAAGGATGCAAACAGACCCTACTAAGGGCTTC
AGGTCTGGAGATACCAGAGGAAGGGGCACTTCGTACCCTCTTCCTATGACTGGCCCTGGCCTTC
TCTGCACATCTGCCCTGGGCCTTGATTGGACTTGGGGCAAAAGCTGCTTCATGGCCCAAAGGGC
CTAGGACCTGGCTCATTCCCACCATCTTGCCTCTCTGGAGGGCCAGTTTTGCCTCCCTGCCTCC
AAGAGCCTATTTCCTCCCCGGTGCCCTTTTGGCCTTTTGTGAGGAAGTGAGGAATAGGCTTGAA
GGTTCAGGGGCATCTGCCTTCTGCTAAGGCTCCTGAGATGAGCTCTGTAACCACTGTTCACACT
TGCCTCCCCTCAGTGGGCCTGAAGTAGCTGTGGAGGCCCAGGAGGACAGCAGGGCATTCTCTTT
CCCAAGCGCCCTCACCTAGCCTCTCCTCCACGGCTCGGCCTTCTCAGAAGCTGGCTCCCACATT
CCCCTCCACCCTCACCTAGAGGTAGGATATCTCCAAATCCCGGGCTCCCAGCCCTAAAACTCAC
TGCCTTCCCCAAGGGCCCCCTCCAAGGAGGATGTGGGGGCCCTGAGGGCTGCCTCTCTGCCAGT
CAGTCACAGAGACCCTTTTTTCATGAGGAAAAGACCTTCCCCTGAATCCCTAAAAATGTTTACA
GTCTCTGCTGGCCCTCCATGTAAATACCATGAGCACCAGGGCATTAACTAGCCCACCCAGCCAG
ACGCTGCCATCTCTCTTTCTGAGAGTTTAGACAATGTTACCCTTGGATTCTTTTTTTTTTTTTT
TCCCTCTCTTGATTTTTCTCCCTTTGCTTTGGGGGTAATTGGGTATTTTGGGGGAAGGGTACCG
GGAGGGCTAAAGGGGTTTATTACCTGATCATTTTCTTTAGGAAGAGGTTTTAGAGAGAAGAACA
TGGGGTGGGAGTGGGAGGTGAAGGGCGAGAAGGGGAAATCAATCTCTGACACTTCTCTACACTT
AACTTATTTACTGAGTTTTACTTTTAAAGAGTTGGCCTTTTCTGTCTAAATAAAGAAAAACATT
TGAAAGCATCAA

hide sequence

RefSeq Acc Id:

XM_006232900 ⟹ XP_006232962

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,223 - 184,819,189 (+)	NCBI
mRatBN7.2	2	182,116,833 - 182,130,163 (+)	NCBI
Rnor_6.0	2	195,718,878 - 195,732,872 (+)	NCBI
Rnor_5.0	2	215,197,348 - 215,211,497 (+)	NCBI

Sequence:

show sequence

GGGGAACCATACAGGGTGGGGGTGGGAGGGGGGGGGTCAAGGGAGAACTTGAAGGGGGCAGGGC
AGAAGGGACCCCCGGAACCCTGCCGCCATCAGAGATCAAGCATTTGGCATCAGGGATCTTCGGA
CCCAGCAAAAGGATCAGCCACAAGGGAGGTGTCCTCCCTAGGAAGCCAACGAGAGAGTCACCTG
CCCCACATCAGGAGCAGGGACCCCCTCATGACGCTGCTGGCAACTATAGCAGGCCCCTAGCCCC
TCAGCCTCCTTCCTATCTCCTTCTTCTGACTCTTATTCCATCTCCTTTGGCATTTGTGCCTTTG
CTCCCCGCCCTCTGAGCTCCAGCTACCACCCAAACGCCCCAGGGCTTGGCTGCCCTGACCCTCA
TCCTGGAATATTTGCCAGATCTCTGGGAGGGAGATCCTTTGCTTGGGCTATGCCCCCTGGGGGT
CTGACAGTGTCTGCCTAGACCCCTGACCCCTAGCCCTCAACTCCCCACGACTCCTTTGTGTGAA
GAGCCCTCCTCTGCTCAGCACTGTGGTTGGGGGCCAAAGGGAAAGCCGGCCCTGCTGGGCCCCT
GGGCCCTACCACCTGCCTCCTGGTTGGGCAGCTTCCCTTGTCTTTGGGCCTCTCCCTGTTCCCC
CGGCCCCTCCTCCTGGGCCGCCCCAATGAAGGAGCCGGATGCCATCAAGCTGTTTGTGGGGCAG
ATCCCGAGGCATCTGGAGGAAAAGGACCTGAAGCCCATCTTCGAGCAGTTTGGTCGGATCTTCG
AGCTGACTGTCATCAAGGACAAGTACACCGGGCTGCACAAGGGATGTGCTTTCCTGACGTACTG
TGCTCGCGATTCAGCCCTGAAGGCCCAGAGTGCCCTGCACGAACAGAAGACTCTCCCAGGGATG
AACAGGCCGATCCAGGTCAAGCCAGCCGACAGCGAGAGTCGAGGAGACCGGAAGCTCTTTGTGG
GGATGCTAGGAAAGCAGCAGACAGATGAGGATGTCCGGAAGATGTTTGAACCGTTTGGGACTAT
AGACGAGTGCACTGTGCTCCGGGGGCCAGACGGGACCAGCAAAGGCTGTGCCTTTGTGAAGTTC
CAGACTCATGCTGAGGCCCAGGCAGCCATTAACACTCTTCACAGCAGCCGGACTCTACCGGGTG
CCTCATCCAGCCTGGTGGTAAAGTTTGCTGACACAGAGAAGGAGCGAGGTCTCCGCCGGATGCA
GCAGGTGGCTACCCAGCTGGGCATGTTCAGCCCTATCGCCCTCCAGTTTGGAGCCTACAGCGCC
TACACCCAGGCCCTGATGCAGCAGCAGGCGGCCCTGGTAGCAGCTCACAGTGCCTACCTCAGCC
CTATGGCCACCATGGCTGCCGTGCAGATGCAGCACATGGCTGCCATCAATGCCAATGGCCTCAT
CGCCACCCCCATCACTCCATCCTCAGGAACCAGCACCCCTCCTGCCATTGCTGCCACGCCGGTC
TCTGCCATTCCTGCTGCCTTGGGCGTCAACGGCTACAGCCCAGTGCCCACCCAGCCCACGGGGC
AGCCTGCCCCTGATGCTCTCTATCCCAACGGGGTTCACCCTTACCCAGCCCAGAGCCCTGCAGC
CCCTGTGGACCCTCTCCAGCAGGCCTACGCAGGAATGCAGCACTACACAGCAGCCTACCCTGCA
GCCTACAGCCTGGTTGCACCTGCGTTCCCGCAGCCTCCAGCCCTGGTCGCCCAGCAGCCCCCAC
CACCACCTCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACAGCA
GCAGCAGCAGCAGCGGGAAGGCCCTGATGGCTGTAACATCTTCATCTACCACCTGCCCCAGGAG
TTCACAGACTCCGAGATCCTCCAGATGTTTGTCCCTTTTGGTCATGTCATCTCAGCCAAAGTCT
TTGTTGACCGGGCCACCAATCAGAGCAAATGTTTTGGCTTTGTGAGTTTCGACAATCCGGCCAG
TGCCCAGGCTGCCATCCAGGCTATGAACGGTTTCCAGATTGGCATGAAGCGCCTCAAAGTCCAG
CTAAAGCGGCCTAAGGATGCAAACAGACCCTACTAAGGGCTTCAGGTCTGGAGATACCAGAGGA
AGGGGCACTTCGTACCCTCTTCCTATGACTGGCCCTGGCCTTCTCTGCACATCTGCCCTGGGCC
TTGATTGGACTTGGGGCAAAAGCTGCTTCATGGCCCAAAGGGCCTAGGACCTGGCTCATTCCCA
CCATCTTGCCTCTCTGGAGGGCCAGTTTTGCCTCCCTGCCTCCAAGAGCCTATTTCCTCCCCGG
TGCCCTTTTGGCCTTTTGTGAGGAAGTGAGGAATAGGCTTGAAGGTTCAGGGGCATCTGCCTTC
TGCTAAGGCTCCTGAGATGAGCTCTGTAACCACTGTTCACACTTGCCTCCCCTCAGTGGGCCTG
AAGTAGCTGTGGAGGCCCAGGAGGACAGCAGGGCATTCTCTTTCCCAAGCGCCCTCACCTAGCC
TCTCCTCCACGGCTCGGCCTTCTCAGAAGCTGGCTCCCACATTCCCCTCCACCCTCACCTAGAG
GTAGGATATCTCCAAATCCCGGGCTCCCAGCCCTAAAACTCACTGCCTTCCCCAAGGGCCCCCT
CCAAGGAGGATGTGGGGGCCCTGAGGGCTGCCTCTCTGCCAGTCAGTCACAGAGACCCTTTTTT
CATGAGGAAAAGACCTTCCCCTGAATCCCTAAAAATGTTTACAGTCTCTGCTGGCCCTCCATGT
AAATACCATGAGCACCAGGGCATTAACTAGCCCACCCAGCCAGACGCTGCCATCTCTCTTTCTG
AGAGTTTAGACAATGTTACCCTTGGATTCTTTTTTTTTTTTTTTCCCTCTCTTGATTTTTCTCC
CTTTGCTTTGGGGGTAATTGGGTATTTTGGGGGAAGGGTACCGGGAGGGCTAAAGGGGTTTATT
ACCTGATCATTTTCTTTAGGAAGAGGTTTTAGAGAGAAGAACATGGGGTGGGAGTGGGAGGTGA
AGGGCGAGAAGGGGAAATCAATCTCTGACACTTCTCTACACTTAACTTATTTACTGAGTTTTAC
TTTTAAAGAGTTGGCCTTTTCTGTCTAAATAAAGAAAAACATTTGAAAGCATCAA

hide sequence

RefSeq Acc Id:

XM_006232904 ⟹ XP_006232966

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,091 - 184,819,189 (+)	NCBI
mRatBN7.2	2	182,116,040 - 182,130,163 (+)	NCBI
Rnor_6.0	2	195,716,373 - 195,732,872 (+)	NCBI
Rnor_5.0	2	215,197,348 - 215,211,497 (+)	NCBI

Sequence:

show sequence

TTCTATGTATGTTTTAATACATAGAACTTAGCTCTTGCTGCAGAGGAATAGGAAAGAGTGAGTT
TATGGATGCTGTGTAGAGAAAATCTCCTGGGGAAATCAAGGCCTGGAGCCTCATTCCTTAGAGA
GAAGATTCTGACGATGGGCTCCTGAGCCACAGGGCCCCTTAGTCTTTATCCCTCAGACTGACAG
CACTGCGGATACTTGCCCATAGCCATTCAGCGAGGAGAGTCTGCTGAATACCCTCTCCCCTCCC
TGAGGCTGACGGCAGCACAGACTGGACATAAGCAAAGGACGGAAAGTTCTTTGCTGACTCCAGC
TGCCTCCCAGTTGCTGCTTGGGAAGAGGAGCAGGAGGGGTTCATTGAAATTCATTTTTGTGAAT
GTTTAATATTTCAATTAATATGATTAAGCTCGAGCCTGAATGAGCAGCAGGGCGGCAGATCTGC
TGAGAAGACACAGGGTAATGAGATCAGTGGGCCCATCCGTGGGGTCTCCCACGTCCACAGGGCG
TGATCTGTTTAGTGTCTCCATAAATGTCAAGATCAGATTAGAAGGCTAGAAAGGAGAAGAGGGG
GTGGGGCAGGTGAATGGAAAGTTACTGTGGAGAATTATAGCTTCCTACTTCCTGGTCCCCTGGC
ACTCCCATGGCATCTCCAGGCTACTCATCATGGAGTCTCCTCTCAACCTCTCAACCCATTCTAG
GGCACCCTATTGGGAGGACCTGGGCGTCTGCACGATGAAGTGTTATCAAGTCGCAAACATACAC
TTACTTCACTCACATATACATTTATACACACAGACACAATGTAGCTTCAGGCCACAGAAACCCA
GATTAAAGAAGGTGGAAGAGGTCACTAGGGAACAGGGCAGTAGGAGGAAGCATGAAGTCTCACC
CAGTGCTTCAGTGAGCACAGAGGGAAAGAAAGGCCAGGTTCACACCAGTTCATTCCCATAAGGA
ATGCTGGGTGTGAGCATTCAGCGTCTGACCTCAGGACCCACCCTGCCCAGGCTGGACTCTCTGT
GTTTTAGTCTCTTCATCCATATCATCTGAGGCGGTGTGTTTCCCCAGTTAGAAAATCTAGCACA
TTTGGAAACCTCCCTAGGACATGTTGTTTTAGTTCCAGTGGAGGGACCTGATCGCTGTGATAAC
TCAGGAATGGAGACCCCCAGGATGCATGCAGGCGTCTCAGAGACAGCTCCAGCCTGGGCAGAAG
GGGAAGCAGGGGGTGCTACACGGAAGTTGCCAAGGGAGCGGATGGATGGTGAACCAGGACTGCT
ACCACAGAGAGCTGATGCCAACAGATACACGGGGCAGGTGTGGTGCTGGAGCACAGAGGGCTCA
TCTTCCCGTAGACTGTGGAACATAGGACCAAGTTTAGAAGTGTAATCGTTTGGGAGAAAAGTAG
TTTCTAATGTATTTTTTGCCTCCTTTCATCTGATTCTGAGTTCCACCCAACGAATCTAACAAAA
GGAAGCAAAGGAAGGAGAAATGGGATACTCTGCCCCTGAGGGGAGCCTGGCAGCTGTGCCTGTG
CCTGTTCCCACAGAAGGAATCAAGATTCTCCACTTGTCACGGGCTCTTGCATGAAGCGTTTGTT
AAGCACCTACTATGTACGAGCAAGACACCACACTAGATACTGGGGACAGTCGGACACTGAGTCT
TGGTCTTCAAGCATAGTACAAGTGAGAGCTGCCGCCAGCTGCTGCCTCCCTGCCCAAGTATACA
CACACCTCCTCCAGAGAGAAGGAAGGGGGTGTCTGAAAATGCCAGGCTGCTAAGCTACTCTTGT
TCCTTTTTCTGGAAAAGTATGCAGACTCTCTCTGACTCACTTCCACTGACTCTCCTTTCCCACA
CCCGTTTGAATTTTTTCCTCTCCGCCTCACTTTTGCTCTTTCCCCCTAGACCCTGTGACCACTT
CCTTCCTCATATACACATCTCTCCCTGCTCTTCAGCGTGCGGGATTGCTCTTTCCCTTTTCCCT
TCCTTGTTTCCTTCCTTGGGTTCTCACTTTCAGACTCCCCAAAGACCAGGCTGCCCTCTCCTCC
CCACCCCCAGCTTCCATCTCCTGGGTCTGCTCTTCCTCTTCCAGCACCGGGGACAGCTCCAACC
CCCGGAACAATGGACCCCACCCTAGGGCTCCTCTATAAATTCTCCATCTTAGTGTCTTTCCCAA
CTCCTGATTGGGGAGTAAGATGGGGGAAGGGTTGTTATCAAGACCAGCTGCTCTTCTGGGGCGG
AAAGGGAGTCACGGAGAATAGAGATAGAAAGAGGGCGTGGCTCTTGCCCGGGTTGTGCGTCTCT
CTCCAGGGTAGAGAATTTGTATTCCACCCCTGAGACTGACATCACTGATGTCAGGGGAAAGGAG
GTGGGAGTGGGGAGGGGGGTGTGGAGGGGGGAGGTTTTTGTTGAGGAGAGCGCGTCCGGAGAGC
AGAGCTCCGGGACCCAGATCCCGAGGCATCTGGAGGAAAAGGACCTGAAGCCCATCTTCGAGCA
GTTTGGTCGGATCTTCGAGCTGACTGTCATCAAGGACAAGTACACCGGGCTGCACAAGGGATGT
GCTTTCCTGACGTACTGTGCTCGCGATTCAGCCCTGAAGGCCCAGAGTGCCCTGCACGAACAGA
AGACTCTCCCAGGGATGAACAGGCCGATCCAGGTCAAGCCAGCCGACAGCGAGAGTCGAGGAGA
AGACCGGAAGCTCTTTGTGGGGATGCTAGGAAAGCAGCAGACAGATGAGGATGTCCGGAAGATG
TTTGAACCGTTTGGGACTATAGACGAGTGCACTGTGCTCCGGGGGCCAGACGGGACCAGCAAAG
GCTGTGCCTTTGTGAAGTTCCAGACTCATGCTGAGGCCCAGGCAGCCATTAACACTCTTCACAG
CAGCCGGACTCTACCGGGTGCCTCATCCAGCCTGGTGGTAAAGTTTGCTGACACAGAGAAGGAG
CGAGGTCTCCGCCGGATGCAGCAGGTGGCTACCCAGCTGGGCATGTTCAGCCCTATCGCCCTCC
AGTTTGGAGCCTACAGCGCCTACACCCAGGCCCTGATGCAGCAGCAGGCGGCCCTGGTAGCAGC
TCACAGTGCCTACCTCAGCCCTATGGCCACCATGGCTGCCGTGCAGATGCAGCACATGGCTGCC
ATCAATGCCAATGGCCTCATCGCCACCCCCATCACTCCATCCTCAGGAACCAGCACCCCTCCTG
CCATTGCTGCCACGCCGGTCTCTGCCATTCCTGCTGCCTTGGGCGTCAACGGCTACAGCCCAGT
GCCCACCCAGCCCACGGGGCAGCCTGCCCCTGATGCTCTCTATCCCAACGGGGTTCACCCTTAC
CCAGACGAGGCTCTGTCTGCTGAGAGAAGTGCTGGTGAGGCTCCCATTATGCCCCAGACCCACT
CATGGCTTGTGATGCTCTCTGCAGCCCAGAGCCCTGCAGCCCCTGTGGACCCTCTCCAGCAGGC
CTACGCAGGAATGCAGCACTACACAGCAGCCTACCCTGCAGCCTACAGCCTGGTTGCACCTGCG
TTCCCGCAGCCTCCAGCCCTGGTCGCCCAGCAGCCCCCACCACCACCTCAGCAGCAACAGCAGC
AGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCGGGAAGGCCC
TGATGGCTGTAACATCTTCATCTACCACCTGCCCCAGGAGTTCACAGACTCCGAGATCCTCCAG
ATGTTTGTCCCTTTTGGTCATGTCATCTCAGCCAAAGTCTTTGTTGACCGGGCCACCAATCAGA
GCAAATGTTTTGGCTTTGTGAGTTTCGACAATCCGGCCAGTGCCCAGGCTGCCATCCAGGCTAT
GAACGGTTTCCAGATTGGCATGAAGCGCCTCAAAGTCCAGCTAAAGCGGCCTAAGGATGCAAAC
AGACCCTACTAAGGGCTTCAGGTCTGGAGATACCAGAGGAAGGGGCACTTCGTACCCTCTTCCT
ATGACTGGCCCTGGCCTTCTCTGCACATCTGCCCTGGGCCTTGATTGGACTTGGGGCAAAAGCT
GCTTCATGGCCCAAAGGGCCTAGGACCTGGCTCATTCCCACCATCTTGCCTCTCTGGAGGGCCA
GTTTTGCCTCCCTGCCTCCAAGAGCCTATTTCCTCCCCGGTGCCCTTTTGGCCTTTTGTGAGGA
AGTGAGGAATAGGCTTGAAGGTTCAGGGGCATCTGCCTTCTGCTAAGGCTCCTGAGATGAGCTC
TGTAACCACTGTTCACACTTGCCTCCCCTCAGTGGGCCTGAAGTAGCTGTGGAGGCCCAGGAGG
ACAGCAGGGCATTCTCTTTCCCAAGCGCCCTCACCTAGCCTCTCCTCCACGGCTCGGCCTTCTC
AGAAGCTGGCTCCCACATTCCCCTCCACCCTCACCTAGAGGTAGGATATCTCCAAATCCCGGGC
TCCCAGCCCTAAAACTCACTGCCTTCCCCAAGGGCCCCCTCCAAGGAGGATGTGGGGGCCCTGA
GGGCTGCCTCTCTGCCAGTCAGTCACAGAGACCCTTTTTTCATGAGGAAAAGACCTTCCCCTGA
ATCCCTAAAAATGTTTACAGTCTCTGCTGGCCCTCCATGTAAATACCATGAGCACCAGGGCATT
AACTAGCCCACCCAGCCAGACGCTGCCATCTCTCTTTCTGAGAGTTTAGACAATGTTACCCTTG
GATTCTTTTTTTTTTTTTTTCCCTCTCTTGATTTTTCTCCCTTTGCTTTGGGGGTAATTGGGTA
TTTTGGGGGAAGGGTACCGGGAGGGCTAAAGGGGTTTATTACCTGATCATTTTCTTTAGGAAGA
GGTTTTAGAGAGAAGAACATGGGGTGGGAGTGGGAGGTGAAGGGCGAGAAGGGGAAATCAATCT
CTGACACTTCTCTACACTTAACTTATTTACTGAGTTTTACTTTTAAAGAGTTGGCCTTTTCTGT
CTAAATAAAGAAAAACATTTGAAAGCATCAA

hide sequence

RefSeq Acc Id:

XM_006232908 ⟹ XP_006232970

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,224 - 184,819,189 (+)	NCBI
mRatBN7.2	2	182,116,833 - 182,130,163 (+)	NCBI
Rnor_6.0	2	195,718,878 - 195,732,872 (+)	NCBI
Rnor_5.0	2	215,197,348 - 215,211,497 (+)	NCBI

Sequence:

show sequence

GGGGAACCATACAGGGTGGGGGTGGGAGGGGGGGGGTCAAGGGAGAACTTGAAGGGGGCAGGGC
AGAAGGGACCCCCGGAACCCTGCCGCCATCAGAGATCAAGCATTTGGCATCAGGGATCTTCGGA
CCCAGCAAAAGGATCAGCCACAAGGGAGGTGTCCTCCCTAGGAAGCCAACGAGAGAGTCACCTG
CCCCACATCAGGAGCAGGGACCCCCTCATGACGCTGCTGGCAACTATAGCAGGCCCCTAGCCCC
TCAGCCTCCTTCCTATCTCCTTCTTCTGACTCTTATTCCATCTCCTTTGGCATTTGTGCCTTTG
CTCCCCGCCCTCTGAGCTCCAGCTACCACCCAAACGCCCCAGGGCTTGGCTGCCCTGACCCTCA
TCCTGGAATATTTGCCAGATCTCTGGGAGGGAGATCCTTTGCTTGGGCTATGCCCCCTGGGGGT
CTGACAGTGTCTGCCTAGACCCCTGACCCCTAGCCCTCAACTCCCCACGACTCCTTTGTGTGAA
GAGCCCTCCTCTGCTCAGCACTGTGGTTGGGGGCCAAAGGGAAAGCCGGCCCTGCTGGGCCCCT
GGGCCCTACCACCTGCCTCCTGGTTGGGCAGCTTCCCTTGTCTTTGGGCCTCTCCCTGTTCCCC
CGGCCCCTCCTCCTGGGCCGCCCCAATGAAGGAGCCGGATGCCATCAAGCTGTTTGTGGGGCAG
ATCCCGAGGCATCTGGAGGAAAAGGACCTGAAGCCCATCTTCGAGCAGTTTGGTCGGATCTTCG
AGCTGACTGTCATCAAGGACAAGTACACCGGGCTGCACAAGGGATGTGCTTTCCTGACGTACTG
TGCTCGCGATTCAGCCCTGAAGGCCCAGAGTGCCCTGCACGAACAGAAGACTCTCCCAGGGATG
AACAGGCCGATCCAGGTCAAGCCAGCCGACAGCGAGAGTCGAGGAGAAGACCGGAAGCTCTTTG
TGGGGATGCTAGGAAAGCAGCAGACAGATGAGGATGTCCGGAAGATGTTTGAACCGTTTGGGAC
TATAGACGAGTGCACTGTGCTCCGGGGGCCAGACGGGACCAGCAAAGGCTGTGCCTTTGTGAAG
TTCCAGACTCATGCTGAGGCCCAGGCAGCCATTAACACTCTTCACAGCAGCCGGACTCTACCGG
GTGCCTCATCCAGCCTGGTGGTAAAGTTTGCTGACACAGAGAAGGAGCGAGGTCTCCGCCGGAT
GCAGCAGGTGGCTACCCAGCTGGGCATGTTCAGCCCTATCGCCCTCCAGTTTGGAGCCTACAGC
GCCTACACCCAGGCCCTGATGCAGCAGCAGGCGGCCCTGGTAGCAGCTCACAGTGCCTACCTCA
GCCCTATGGCCACCATGGCTGCCGTGCAGATGCAGCACATGGCTGCCATCAATGCCAATGGCCT
CATCGCCACCCCCATCACTCCATCCTCAGCCCAGAGCCCTGCAGCCCCTGTGGACCCTCTCCAG
CAGGCCTACGCAGGAATGCAGCACTACACAGCAGCCTACCCTGCAGCCTACAGCCTGGTTGCAC
CTGCGTTCCCGCAGCCTCCAGCCCTGGTCGCCCAGCAGCCCCCACCACCACCTCAGCAGCAACA
GCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCGGGAA
GGCCCTGATGGCTGTAACATCTTCATCTACCACCTGCCCCAGGAGTTCACAGACTCCGAGATCC
TCCAGATGTTTGTCCCTTTTGGTCATGTCATCTCAGCCAAAGTCTTTGTTGACCGGGCCACCAA
TCAGAGCAAATGTTTTGGCTTTGTGAGTTTCGACAATCCGGCCAGTGCCCAGGCTGCCATCCAG
GCTATGAACGGTTTCCAGATTGGCATGAAGCGCCTCAAAGTCCAGCTAAAGCGGCCTAAGGATG
CAAACAGACCCTACTAAGGGCTTCAGGTCTGGAGATACCAGAGGAAGGGGCACTTCGTACCCTC
TTCCTATGACTGGCCCTGGCCTTCTCTGCACATCTGCCCTGGGCCTTGATTGGACTTGGGGCAA
AAGCTGCTTCATGGCCCAAAGGGCCTAGGACCTGGCTCATTCCCACCATCTTGCCTCTCTGGAG
GGCCAGTTTTGCCTCCCTGCCTCCAAGAGCCTATTTCCTCCCCGGTGCCCTTTTGGCCTTTTGT
GAGGAAGTGAGGAATAGGCTTGAAGGTTCAGGGGCATCTGCCTTCTGCTAAGGCTCCTGAGATG
AGCTCTGTAACCACTGTTCACACTTGCCTCCCCTCAGTGGGCCTGAAGTAGCTGTGGAGGCCCA
GGAGGACAGCAGGGCATTCTCTTTCCCAAGCGCCCTCACCTAGCCTCTCCTCCACGGCTCGGCC
TTCTCAGAAGCTGGCTCCCACATTCCCCTCCACCCTCACCTAGAGGTAGGATATCTCCAAATCC
CGGGCTCCCAGCCCTAAAACTCACTGCCTTCCCCAAGGGCCCCCTCCAAGGAGGATGTGGGGGC
CCTGAGGGCTGCCTCTCTGCCAGTCAGTCACAGAGACCCTTTTTTCATGAGGAAAAGACCTTCC
CCTGAATCCCTAAAAATGTTTACAGTCTCTGCTGGCCCTCCATGTAAATACCATGAGCACCAGG
GCATTAACTAGCCCACCCAGCCAGACGCTGCCATCTCTCTTTCTGAGAGTTTAGACAATGTTAC
CCTTGGATTCTTTTTTTTTTTTTTTCCCTCTCTTGATTTTTCTCCCTTTGCTTTGGGGGTAATT
GGGTATTTTGGGGGAAGGGTACCGGGAGGGCTAAAGGGGTTTATTACCTGATCATTTTCTTTAG
GAAGAGGTTTTAGAGAGAAGAACATGGGGTGGGAGTGGGAGGTGAAGGGCGAGAAGGGGAAATC
AATCTCTGACACTTCTCTACACTTAACTTATTTACTGAGTTTTACTTTTAAAGAGTTGGCCTTT
TCTGTCTAAATAAAGAAAAACATTTGAAAGCATCAA

hide sequence

RefSeq Acc Id:

XM_008761322 ⟹ XP_008759544

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,090 - 184,819,189 (+)	NCBI
mRatBN7.2	2	182,116,185 - 182,130,163 (+)	NCBI
Rnor_6.0	2	195,718,741 - 195,732,872 (+)	NCBI

Sequence:

show sequence

GTGGGAGTGGGGAGGGGGGTGTGGAGGGGGGAGGTTTTTGTTGAGGAGAGCGCGTCCGGAGAGC
AGAGCTCCGGGACCCAGGGATCTTCGGACCCAGCAAAAGGATCAGCCACAAGGGAGGTGTCCTC
CCTAGGAAGCCAACGAGAGAGTCACCTGCCCCACATCAGGAGCAGGGACCCCCTCATGACGCTG
CTGGCAACTATAGCAGGCCCCTAGCCCCTCAGCCTCCTTCCTATCTCCTTCTTCTGACTCTTAT
TCCATCTCCTTTGGCATTTGTGCCTTTGCTCCCCGCCCTCTGAGCTCCAGCTACCACCCAAACG
CCCCAGGGCTTGGCTGCCCTGACCCTCATCCTGGAATATTTGCCAGATCTCTGGGAGGGAGATC
CTTTGCTTGGGCTATGCCCCCTGGGGGTCTGACAGTGTCTGCCTAGACCCCTGACCCCTAGCCC
TCAACTCCCCACGACTCCTTTGTGTGAAGAGCCCTCCTCTGCTCAGCACTGTGGTTGGGGGCCA
AAGGGAAAGCCGGCCCTGCTGGGCCCCTGGGCCCTACCACCTGCCTCCTGGTTGGGCAGCTTCC
CTTGTCTTTGGGCCTCTCCCTGTTCCCCCGGCCCCTCCTCCTGGGCCGCCCCAATGAAGGAGCC
GGATGCCATCAAGCTGTTTGTGGGGCAGATCCCGAGGCATCTGGAGGAAAAGGACCTGAAGCCC
ATCTTCGAGCAGTTTGGTCGGATCTTCGAGCTGACTGTCATCAAGGACAAGTACACCGGGCTGC
ACAAGGGATGTGCTTTCCTGACGTACTGTGCTCGCGATTCAGCCCTGAAGGCCCAGAGTGCCCT
GCACGAACAGAAGACTCTCCCAGGGATGAACAGGCCGATCCAGGTCAAGCCAGCCGACAGCGAG
AGTCGAGGAGAAGACCGGAAGCTCTTTGTGGGGATGCTAGGAAAGCAGCAGACAGATGAGGATG
TCCGGAAGATGTTTGAACCGTTTGGGACTATAGACGAGTGCACTGTGCTCCGGGGGCCAGACGG
GACCAGCAAAGGCTGTGCCTTTGTGAAGTTCCAGACTCATGCTGAGGCCCAGGCAGCCATTAAC
ACTCTTCACAGCAGCCGGACTCTACCGGGTGCCTCATCCAGCCTGGTGGTAAAGTTTGCTGACA
CAGAGAAGGAGCGAGGTCTCCGCCGGATGCAGCAGGTGGCTACCCAGCTGGGCATGTTCAGCCC
TATCGCCCTCCAGTTTGGAGCCTACAGCGCCTACACCCAGGCCCTGATGCAGCAGCAGGCGGCC
CTGGTAGCAGCTCACAGTGCCTACCTCAGCCCTATGGCCACCATGGCTGCCGTGCAGATGCAGC
ACATGGCTGCCATCAATGCCAATGGCCTCATCGCCACCCCCATCACTCCATCCTCAGGAACCAG
CACCCCTCCTGCCATTGCTGCCACGCCGGTCTCTGCCATTCCTGCTGCCTTGGGCGTCAACGGC
TACAGCCCAGTGCCCACCCAGCCCACGGGGCAGCCTGCCCCTGATGCTCTCTATCCCAACGGGG
TTCACCCTTACCCAGACGAGGCTCTGTCTGCTGAGAGAAGTGCTGGTGAGGCTCCCATTATGCC
CCAGACCCACTCATGGCTTGTGATGCTCTCTGCAGCCCAGAGCCCTGCAGCCCCTGTGGACCCT
CTCCAGCAGGCCTACGCAGGAATGCAGCACTACACAGCAGCCTACCCTGCAGCCTACAGCCTGG
TTGCACCTGCGTTCCCGCAGCCTCCAGCCCTGGTCGCCCAGCAGCCCCCACCACCACCTCAGCA
GCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAG
CGGGAAGGCCCTGATGGCTGTAACATCTTCATCTACCACCTGCCCCAGGAGTTCACAGACTCCG
AGATCCTCCAGATGTTTGTCCCTTTTGGTCATGTCATCTCAGCCAAAGTCTTTGTTGACCGGGC
CACCAATCAGAGCAAATGTTTTGGCTTTGTGAGTTTCGACAATCCGGCCAGTGCCCAGGCTGCC
ATCCAGGCTATGAACGGTTTCCAGATTGGCATGAAGCGCCTCAAAGTCCAGCTAAAGCGGCCTA
AGGATGCAAACAGACCCTACTAAGGGCTTCAGGTCTGGAGATACCAGAGGAAGGGGCACTTCGT
ACCCTCTTCCTATGACTGGCCCTGGCCTTCTCTGCACATCTGCCCTGGGCCTTGATTGGACTTG
GGGCAAAAGCTGCTTCATGGCCCAAAGGGCCTAGGACCTGGCTCATTCCCACCATCTTGCCTCT
CTGGAGGGCCAGTTTTGCCTCCCTGCCTCCAAGAGCCTATTTCCTCCCCGGTGCCCTTTTGGCC
TTTTGTGAGGAAGTGAGGAATAGGCTTGAAGGTTCAGGGGCATCTGCCTTCTGCTAAGGCTCCT
GAGATGAGCTCTGTAACCACTGTTCACACTTGCCTCCCCTCAGTGGGCCTGAAGTAGCTGTGGA
GGCCCAGGAGGACAGCAGGGCATTCTCTTTCCCAAGCGCCCTCACCTAGCCTCTCCTCCACGGC
TCGGCCTTCTCAGAAGCTGGCTCCCACATTCCCCTCCACCCTCACCTAGAGGTAGGATATCTCC
AAATCCCGGGCTCCCAGCCCTAAAACTCACTGCCTTCCCCAAGGGCCCCCTCCAAGGAGGATGT
GGGGGCCCTGAGGGCTGCCTCTCTGCCAGTCAGTCACAGAGACCCTTTTTTCATGAGGAAAAGA
CCTTCCCCTGAATCCCTAAAAATGTTTACAGTCTCTGCTGGCCCTCCATGTAAATACCATGAGC
ACCAGGGCATTAACTAGCCCACCCAGCCAGACGCTGCCATCTCTCTTTCTGAGAGTTTAGACAA
TGTTACCCTTGGATTCTTTTTTTTTTTTTTTCCCTCTCTTGATTTTTCTCCCTTTGCTTTGGGG
GTAATTGGGTATTTTGGGGGAAGGGTACCGGGAGGGCTAAAGGGGTTTATTACCTGATCATTTT
CTTTAGGAAGAGGTTTTAGAGAGAAGAACATGGGGTGGGAGTGGGAGGTGAAGGGCGAGAAGGG
GAAATCAATCTCTGACACTTCTCTACACTTAACTTATTTACTGAGTTTTACTTTTAAAGAGTTG
GCCTTTTCTGTCTAAATAAAGAAAAACATTTGAAAGCATCAA

hide sequence

RefSeq Acc Id:

XM_039102915 ⟹ XP_038958843

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,223 - 184,819,189 (+)	NCBI
mRatBN7.2	2	182,116,833 - 182,130,163 (+)	NCBI

RefSeq Acc Id:

XM_039102932 ⟹ XP_038958860

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,095 - 184,819,189 (+)	NCBI
mRatBN7.2	2	182,116,072 - 182,129,963 (+)	NCBI

RefSeq Acc Id:

XM_063282376 ⟹ XP_063138446

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,223 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282377 ⟹ XP_063138447

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,223 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282378 ⟹ XP_063138448

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,223 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282379 ⟹ XP_063138449

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,811,113 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282380 ⟹ XP_063138450

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,100 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282381 ⟹ XP_063138451

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,223 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282382 ⟹ XP_063138452

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,223 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282383 ⟹ XP_063138453

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,222 - 184,816,312 (+)	NCBI

RefSeq Acc Id:

XM_063282384 ⟹ XP_063138454

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,222 - 184,816,312 (+)	NCBI

RefSeq Acc Id:

XM_063282385 ⟹ XP_063138455

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,223 - 184,816,312 (+)	NCBI

RefSeq Acc Id:

XM_063282386 ⟹ XP_063138456

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,222 - 184,816,312 (+)	NCBI

RefSeq Acc Id:

XM_063282387 ⟹ XP_063138457

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,222 - 184,816,312 (+)	NCBI

RefSeq Acc Id:

XM_063282388 ⟹ XP_063138458

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,088 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282389 ⟹ XP_063138459

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,811,113 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282390 ⟹ XP_063138460

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,088 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282391 ⟹ XP_063138461

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,811,113 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282392 ⟹ XP_063138462

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,811,113 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282393 ⟹ XP_063138463

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,078 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282394 ⟹ XP_063138464

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,091 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282395 ⟹ XP_063138465

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,102 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282396 ⟹ XP_063138466

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,811,113 - 184,816,312 (+)	NCBI

RefSeq Acc Id:

XM_063282397 ⟹ XP_063138467

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,811,113 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282398 ⟹ XP_063138468

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,084 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282399 ⟹ XP_063138469

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,088 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XM_063282401 ⟹ XP_063138471

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,098 - 184,816,312 (+)	NCBI

RefSeq Acc Id:

XR_010063644

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,223 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XR_010063645

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,224 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XR_010063646

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,223 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XR_010063647

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,806,950 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XR_010063648

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,811,113 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XR_010063649

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,103 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XR_010063650

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,811,964 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XR_010063651

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,093 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XR_010063652

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,805,103 - 184,819,189 (+)	NCBI

RefSeq Acc Id:

XR_010063653

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	184,811,365 - 184,819,189 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001102660	(Get FASTA)	NCBI Sequence Viewer
	XP_006232960	(Get FASTA)	NCBI Sequence Viewer
	XP_006232962	(Get FASTA)	NCBI Sequence Viewer
	XP_006232966	(Get FASTA)	NCBI Sequence Viewer
	XP_006232970	(Get FASTA)	NCBI Sequence Viewer
	XP_008759544	(Get FASTA)	NCBI Sequence Viewer
	XP_038958843	(Get FASTA)	NCBI Sequence Viewer
	XP_038958860	(Get FASTA)	NCBI Sequence Viewer
	XP_063138446	(Get FASTA)	NCBI Sequence Viewer
	XP_063138447	(Get FASTA)	NCBI Sequence Viewer
	XP_063138448	(Get FASTA)	NCBI Sequence Viewer
	XP_063138449	(Get FASTA)	NCBI Sequence Viewer
	XP_063138450	(Get FASTA)	NCBI Sequence Viewer
	XP_063138451	(Get FASTA)	NCBI Sequence Viewer
	XP_063138452	(Get FASTA)	NCBI Sequence Viewer
	XP_063138453	(Get FASTA)	NCBI Sequence Viewer
	XP_063138454	(Get FASTA)	NCBI Sequence Viewer
	XP_063138455	(Get FASTA)	NCBI Sequence Viewer
	XP_063138456	(Get FASTA)	NCBI Sequence Viewer
	XP_063138457	(Get FASTA)	NCBI Sequence Viewer
	XP_063138458	(Get FASTA)	NCBI Sequence Viewer
	XP_063138459	(Get FASTA)	NCBI Sequence Viewer
	XP_063138460	(Get FASTA)	NCBI Sequence Viewer
	XP_063138461	(Get FASTA)	NCBI Sequence Viewer
	XP_063138462	(Get FASTA)	NCBI Sequence Viewer
	XP_063138463	(Get FASTA)	NCBI Sequence Viewer
	XP_063138464	(Get FASTA)	NCBI Sequence Viewer
	XP_063138465	(Get FASTA)	NCBI Sequence Viewer
	XP_063138466	(Get FASTA)	NCBI Sequence Viewer
	XP_063138467	(Get FASTA)	NCBI Sequence Viewer
	XP_063138468	(Get FASTA)	NCBI Sequence Viewer
	XP_063138469	(Get FASTA)	NCBI Sequence Viewer
	XP_063138471	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL85781	(Get FASTA)	NCBI Sequence Viewer
	EDL85782	(Get FASTA)	NCBI Sequence Viewer
	EDL85783	(Get FASTA)	NCBI Sequence Viewer
	EDL85784	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000028324
	ENSRNOP00000028324.7
	ENSRNOP00000092441
	ENSRNOP00000092441.1
	ENSRNOP00000111046
	ENSRNOP00000111046.1

RefSeq Acc Id:

NP_001102660 ⟸ NM_001109190

- UniProtKB:

A6K2R6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA
QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLR
GPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLG
MFSPIALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPS
SGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQQ
AYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQQQQQQQQQREG
PDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQA
MNGFQIGMKRLKVQLKRPKDANRPY

hide sequence

RefSeq Acc Id:	XP_006232966 ⟸ XM_006232904
- Peptide Label:	isoform X8
- UniProtKB:	D4A916 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFV KFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQFGAY SAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPSSGTSTPPAIAAT PVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPDEALSAERSAGEAPIMPQTHSWLVM LSAAQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQ QQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFG FVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY hide sequence

RefSeq Acc Id:

XP_006232960 ⟸ XM_006232898

- Peptide Label:

isoform X2

- Sequence:

show sequence

MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA
QSALHEQKTLPGMNRPIQVKPADSESRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRG
PDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGM
FSPIALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPSS
GTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPDEALSAERSAGEAP
IMPQTHSWLVMLSAAQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPP
PQQQQQQQQQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFV
DRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY

hide sequence

RefSeq Acc Id:

XP_006232970 ⟸ XM_006232908

- Peptide Label:

isoform X10

- Sequence:

show sequence

MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA
QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLR
GPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLG
MFSPIALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPS
SAQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQ
QQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFV
SFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY

hide sequence

RefSeq Acc Id:

XP_006232962 ⟸ XM_006232900

- Peptide Label:

isoform X4

- Sequence:

show sequence

MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA
QSALHEQKTLPGMNRPIQVKPADSESRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRG
PDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGM
FSPIALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPSS
GTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQQA
YAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQQQQQQQQQREGP
DGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAM
NGFQIGMKRLKVQLKRPKDANRPY

hide sequence

RefSeq Acc Id:	XP_008759544 ⟸ XM_008761322
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AGJ7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLR GPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLG MFSPIALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPS SGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPDEALSAERSAGEA PIMPQTHSWLVMLSAAQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPP PPQQQQQQQQQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVF VDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY hide sequence

Ensembl Acc Id:

ENSRNOP00000028324 ⟸ ENSRNOT00000028324

RefSeq Acc Id:	XP_038958860 ⟸ XM_039102932
- Peptide Label:	isoform X9
- UniProtKB:	D4A916 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038958843 ⟸ XM_039102915
- Peptide Label:	isoform X5

Ensembl Acc Id:

ENSRNOP00000092441 ⟸ ENSRNOT00000115671

RefSeq Acc Id:	XP_063138463 ⟸ XM_063282393
- Peptide Label:	isoform X21
- UniProtKB:	D4A916 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063138468 ⟸ XM_063282398
- Peptide Label:	isoform X25

RefSeq Acc Id:	XP_063138458 ⟸ XM_063282388
- Peptide Label:	isoform X19
- UniProtKB:	D4A916 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063138469 ⟸ XM_063282399
- Peptide Label:	isoform X26

RefSeq Acc Id:	XP_063138460 ⟸ XM_063282390
- Peptide Label:	isoform X20
- UniProtKB:	D4A916 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063138464 ⟸ XM_063282394
- Peptide Label:	isoform X22
- UniProtKB:	D4A916 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063138471 ⟸ XM_063282401
- Peptide Label:	isoform X27

RefSeq Acc Id:	XP_063138450 ⟸ XM_063282380
- Peptide Label:	isoform X11
- UniProtKB:	D4A916 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063138465 ⟸ XM_063282395
- Peptide Label:	isoform X23
- UniProtKB:	D4A916 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063138453 ⟸ XM_063282383
- Peptide Label:	isoform X14

RefSeq Acc Id:	XP_063138454 ⟸ XM_063282384
- Peptide Label:	isoform X15

RefSeq Acc Id:	XP_063138457 ⟸ XM_063282387
- Peptide Label:	isoform X18

RefSeq Acc Id:	XP_063138456 ⟸ XM_063282386
- Peptide Label:	isoform X17

RefSeq Acc Id:	XP_063138446 ⟸ XM_063282376
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063138447 ⟸ XM_063282377
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063138451 ⟸ XM_063282381
- Peptide Label:	isoform X12

RefSeq Acc Id:	XP_063138448 ⟸ XM_063282378
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063138452 ⟸ XM_063282382
- Peptide Label:	isoform X13

RefSeq Acc Id:	XP_063138455 ⟸ XM_063282385
- Peptide Label:	isoform X16

RefSeq Acc Id:	XP_063138449 ⟸ XM_063282379
- Peptide Label:	isoform X8
- UniProtKB:	D4A916 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063138459 ⟸ XM_063282389
- Peptide Label:	isoform X19
- UniProtKB:	D4A916 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063138462 ⟸ XM_063282392
- Peptide Label:	isoform X21
- UniProtKB:	D4A916 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063138467 ⟸ XM_063282397
- Peptide Label:	isoform X25

RefSeq Acc Id:	XP_063138461 ⟸ XM_063282391
- Peptide Label:	isoform X20
- UniProtKB:	D4A916 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063138466 ⟸ XM_063282396
- Peptide Label:	isoform X24

Ensembl Acc Id:

ENSRNOP00000111046 ⟸ ENSRNOT00000145844

Protein Domains

RRM

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A916-F1-model_v2	AlphaFold	D4A916	1-473	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1563168	AgrOrtholog
BioCyc Gene	G2FUF-52157	BioCyc
Ensembl Genes	ENSRNOG00000020875	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000028324	ENTREZGENE
	ENSRNOT00000028324.9	UniProtKB/TrEMBL
	ENSRNOT00000115671	ENTREZGENE
	ENSRNOT00000115671.2	UniProtKB/TrEMBL
	ENSRNOT00000145844	ENTREZGENE
	ENSRNOT00000145844.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.70.330	UniProtKB/TrEMBL
InterPro	CELF3/4/5/6_RRM1	UniProtKB/TrEMBL
	Nucleotide-bd_a/b_plait_sf	UniProtKB/TrEMBL
	RBD_domain_sf	UniProtKB/TrEMBL
	RRM_RNP1	UniProtKB/TrEMBL
KEGG Report	rno:499669	UniProtKB/TrEMBL
NCBI Gene	499669	ENTREZGENE
PANTHER	RNA BINDING PROTEIN	UniProtKB/TrEMBL
Pfam	RRM_1	UniProtKB/TrEMBL
PhenoGen	Celf3	PhenoGen
PROSITE	RRM	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000020875	RatGTEx
SMART	RRM	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54928	UniProtKB/TrEMBL
UniProt	A0A8I6AGJ7	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0M8Q1_RAT	UniProtKB/TrEMBL
	A6K2R6	ENTREZGENE, UniProtKB/TrEMBL
	D4A916	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-08-01	Celf3	CUGBP, Elav-like family member 3	Tnrc4	trinucleotide repeat containing 4	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-06	Tnrc4	trinucleotide repeat containing 4	RGD1563168_predicted	similar to trinucleotide repeat containing 4 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1563168_predicted	similar to trinucleotide repeat containing 4 (predicted)	LOC499669	similar to trinucleotide repeat containing 4	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC499669	similar to trinucleotide repeat containing 4			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar