Gas2 (growth arrest-specific 2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Gas2 (growth arrest-specific 2) Rattus norvegicus
Analyze
Symbol: Gas2
Name: growth arrest-specific 2
RGD ID: 1563167
Description: Predicted to enable actin filament binding activity. Predicted to be involved in actin crosslink formation. Predicted to act upstream of or within several processes, including ovarian follicle development; ovulation; and regulation of Notch signaling pathway. Predicted to be located in cytoplasm and cytoskeleton. Orthologous to human GAS2 (growth arrest specific 2); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,5-hexanedione.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: growth arrest-specific protein 2; LOC499156; RGD1563167; similar to growth arrest-specific protein 2 - mouse
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81110,587,952 - 110,721,572 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1110,717,312 - 110,718,541 (+)EnsemblGRCr8
mRatBN7.21101,452,361 - 101,582,619 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1101,482,591 - 101,582,619 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1106,891,445 - 106,991,464 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01115,363,339 - 115,463,358 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01108,666,556 - 108,766,696 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01107,234,389 - 107,363,624 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1107,262,659 - 107,363,788 (+)Ensemblrn6Rnor6.0
Rnor_5.01108,275,144 - 108,405,240 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41101,697,265 - 101,798,495 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera195,649,226 - 95,749,292 (+)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
1,1-dichloroethene  (ISO)
1,2-dichloroethane  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,5-hexanedione  (EXP)
3',5'-cyclic UMP  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
6-propyl-2-thiouracil  (EXP)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
amitrole  (EXP)
aristolochic acid A  (EXP)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
Benoxacor  (ISO)
benzo[a]pyrene  (ISO)
beta-lapachone  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
butanal  (ISO)
C60 fullerene  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (ISO)
cocaine  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (ISO)
cyclophosphamide  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dicrotophos  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
emodin  (ISO)
endosulfan  (EXP)
ethyl methanesulfonate  (ISO)
fipronil  (EXP)
flutamide  (EXP)
folic acid  (ISO)
formaldehyde  (ISO)
fulvestrant  (ISO)
malathion  (ISO)
methapyrilene  (EXP)
methimazole  (EXP)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
N(4)-hydroxycytidine  (ISO)
N-methylformamide  (ISO)
N-nitrosodiethylamine  (ISO)
nickel atom  (ISO)
nickel dichloride  (EXP)
okadaic acid  (ISO)
paracetamol  (EXP,ISO)
perfluorononanoic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
pirinixic acid  (ISO)
pyrazinecarboxamide  (EXP)
quercetin  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sodium fluoride  (ISO)
sulfadimethoxine  (EXP)
sunitinib  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (EXP)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
triadimefon  (EXP)
trichloroethene  (EXP)
trichostatin A  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
trovafloxacin  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vancomycin  (ISO)
venlafaxine hydrochloride  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoskeleton  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:27734842  


Genomics

Comparative Map Data
Gas2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81110,587,952 - 110,721,572 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1110,717,312 - 110,718,541 (+)EnsemblGRCr8
mRatBN7.21101,452,361 - 101,582,619 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1101,482,591 - 101,582,619 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1106,891,445 - 106,991,464 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01115,363,339 - 115,463,358 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01108,666,556 - 108,766,696 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01107,234,389 - 107,363,624 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1107,262,659 - 107,363,788 (+)Ensemblrn6Rnor6.0
Rnor_5.01108,275,144 - 108,405,240 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41101,697,265 - 101,798,495 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera195,649,226 - 95,749,292 (+)NCBICelera
Cytogenetic Map1q22NCBI
GAS2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381122,626,002 - 22,813,055 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1122,625,509 - 22,813,803 (+)Ensemblhg38GRCh38
GRCh371122,688,122 - 22,834,601 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361122,646,230 - 22,791,123 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341122,646,229 - 22,791,122NCBI
Celera1122,822,041 - 22,968,405 (+)NCBICelera
Cytogenetic Map11p14.3NCBI
HuRef1122,371,075 - 22,517,950 (+)NCBIHuRef
CHM1_11122,687,492 - 22,833,858 (+)NCBICHM1_1
T2T-CHM13v2.01122,746,758 - 22,933,721 (+)NCBIT2T-CHM13v2.0
Gas2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39751,511,560 - 51,644,753 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl751,511,763 - 51,644,723 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38751,861,791 - 51,995,005 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl751,862,015 - 51,994,975 (+)Ensemblmm10GRCm38
MGSCv37759,134,515 - 59,249,828 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36751,747,164 - 51,862,477 (+)NCBIMGSCv36mm8
Celera749,252,262 - 49,365,402 (+)NCBICelera
Cytogenetic Map7B4NCBI
cM Map732.87NCBI
Gas2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554763,100,479 - 3,226,262 (+)Ensembl
ChiLan1.0NW_0049554763,092,461 - 3,226,269 (+)NCBIChiLan1.0ChiLan1.0
GAS2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2924,914,966 - 25,099,422 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11124,879,135 - 25,065,347 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01122,639,677 - 22,822,208 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11122,547,301 - 22,729,241 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1122,583,367 - 22,729,243 (+)EnsemblpanPan2panpan1.1
GAS2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12144,277,996 - 44,406,210 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2144,286,531 - 44,405,060 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2143,753,331 - 43,880,913 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02145,395,215 - 45,524,757 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2145,372,654 - 45,524,740 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12144,395,431 - 44,522,737 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02144,567,541 - 44,695,231 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02144,960,441 - 45,088,773 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Gas2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494740,477,656 - 40,600,129 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366543,326,511 - 3,448,872 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366543,326,557 - 3,448,930 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GAS2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl236,711,612 - 36,885,620 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1236,712,758 - 36,885,436 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2239,823,080 - 39,928,195 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GAS2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1142,201,546 - 42,376,934 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666038139,505,960 - 139,648,400 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gas2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476613,612,702 - 13,741,606 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462476613,610,229 - 13,741,604 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Gas2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v12148,651,421 - 148,763,744 (-)NCBIRrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:136
Count of miRNA genes:89
Interacting mature miRNAs:121
Transcripts:ENSRNOT00000022499
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1582234Gluco18Glucose level QTL 183.40.0003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)187889942132889942Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)139728272132889942Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)151941022208479811Rat
1331793Bp200Blood pressure QTL 2003.71601arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1102780511182384005Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)151940904168768703Rat
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1101228864146228864Rat
1331800Scl25Serum cholesterol level QTL 253.013blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)187785026142582336Rat
7421628Bp361Blood pressure QTL 3610.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183019780128019780Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)166404680111404680Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134184556172281316Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)166009857160501508Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134565911208798288Rat
631519Pia11Pristane induced arthritis QTL 115.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)193903998191260518Rat
1302788Scl19Serum cholesterol QTL 194.60.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)166400974132889942Rat
61399Tcat1Tongue tumor resistance QTL 13.3tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 5 mm (CMO:0001879)1108680016153680016Rat
1549903Bp267Blood pressure QTL 267arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)184107164115183752Rat
2313083Bmd74Bone mineral density QTL 7440.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)191302413136302413Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)151511344153680016Rat
724567Tcas6Tongue tumor susceptibility QTL 66.85tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)1102359314153680016Rat
724521Uae1Urinary albumin excretion QTL 13.80.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)199645382182701046Rat
1358902Bw47Body weight QTL 471.67body mass (VT:0001259)body weight (CMO:0000012)199645382221502378Rat
1358192Ept13Estrogen-induced pituitary tumorigenesis QTL 133.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)186622262131622262Rat
8655649Arrd1Age-related retinal degeneration QTL 14.89retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1109493780193400781Rat
2300164Bmd44Bone mineral density QTL 445.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)166077886111077886Rat
2317833Alcrsp19Alcohol response QTL 1912.40.001response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1110389869155389869Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1103779152223964440Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)198879955208479939Rat
738022Anxrr13Anxiety related response QTL 134.60.00039locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of, or within a discrete space in an open field apparatus (CMO:0001514)192683681137683681Rat
10054135Gmadr2Adrenal mass QTL 21.970.0129adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)186993904131993904Rat
1641897Alcrsp1Alcohol response QTL 1response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1110389869155389869Rat
7411712Strs4Sensitivity to stroke QTL 48.7cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)187558587132558587Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)192683681137683681Rat
737977Bp160Blood pressure QTL 1600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)197582336142582336Rat
2293142Bp314Blood pressure QTL 314arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1101594089146594089Rat
61433Cia2Collagen induced arthritis QTL 25joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1100345976145345976Rat
724529Cm16Cardiac mass QTL 162.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)196717367160111531Rat

Markers in Region
M21828  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21101,581,752 - 101,581,952 (+)MAPPERmRatBN7.2
Rnor_6.01107,362,742 - 107,362,941NCBIRnor6.0
Rnor_5.01108,404,374 - 108,404,573UniSTSRnor5.0
RGSC_v3.41101,797,629 - 101,797,828UniSTSRGSC3.4
Celera195,748,426 - 95,748,625UniSTS
Cytogenetic Map1q22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 66 163 91 90 59 76 59 6 338 175 11 142 80 90 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001127504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006229270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006229273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008759408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017589558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017589559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC092660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000022499   ⟹   ENSRNOP00000022499
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1101,482,591 - 101,582,619 (+)Ensembl
Rnor_6.0 Ensembl1107,262,659 - 107,363,788 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000082582   ⟹   ENSRNOP00000072497
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1110,717,312 - 110,718,541 (+)Ensembl
mRatBN7.2 Ensembl1101,563,913 - 101,582,618 (+)Ensembl
Rnor_6.0 Ensembl1107,344,904 - 107,363,607 (+)Ensembl
RefSeq Acc Id: NM_001127504   ⟹   NP_001120976
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81110,618,521 - 110,718,542 (+)NCBI
mRatBN7.21101,482,591 - 101,582,619 (+)NCBI
Rnor_6.01107,263,130 - 107,363,608 (+)NCBI
Rnor_5.01108,275,144 - 108,405,240 (+)NCBI
RGSC_v3.41101,697,265 - 101,798,495 (+)RGD
Celera195,649,226 - 95,749,292 (+)RGD
Sequence:
RefSeq Acc Id: XM_006229273   ⟹   XP_006229335
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81110,618,216 - 110,721,572 (+)NCBI
mRatBN7.21101,482,305 - 101,582,619 (+)NCBI
Rnor_6.01107,262,790 - 107,363,624 (+)NCBI
Rnor_5.01108,275,144 - 108,405,240 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017589558   ⟹   XP_017445047
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81110,587,952 - 110,721,572 (+)NCBI
mRatBN7.21101,452,361 - 101,582,619 (+)NCBI
Rnor_6.01107,234,389 - 107,363,624 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017589559   ⟹   XP_017445048
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81110,588,713 - 110,721,572 (+)NCBI
mRatBN7.21101,452,361 - 101,582,619 (+)NCBI
Rnor_6.01107,234,389 - 107,363,624 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039087544   ⟹   XP_038943472
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81110,588,709 - 110,668,390 (+)NCBI
mRatBN7.21101,452,361 - 101,532,459 (+)NCBI
RefSeq Acc Id: XM_063271067   ⟹   XP_063127137
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81110,610,845 - 110,721,572 (+)NCBI
RefSeq Acc Id: XM_063271070   ⟹   XP_063127140
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81110,609,457 - 110,721,572 (+)NCBI
RefSeq Acc Id: XM_063271078   ⟹   XP_063127148
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81110,588,709 - 110,721,572 (+)NCBI
RefSeq Acc Id: XM_063271079   ⟹   XP_063127149
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81110,610,845 - 110,721,572 (+)NCBI
RefSeq Acc Id: XM_063271086   ⟹   XP_063127156
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81110,609,470 - 110,721,572 (+)NCBI
RefSeq Acc Id: XM_063271089   ⟹   XP_063127159
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81110,617,602 - 110,721,572 (+)NCBI
RefSeq Acc Id: XM_063271093   ⟹   XP_063127163
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81110,588,713 - 110,721,572 (+)NCBI
RefSeq Acc Id: XM_063271101   ⟹   XP_063127171
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81110,587,952 - 110,721,572 (+)NCBI
RefSeq Acc Id: XM_063271105   ⟹   XP_063127175
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81110,610,577 - 110,721,572 (+)NCBI
RefSeq Acc Id: NP_001120976   ⟸   NM_001127504
- UniProtKB: G3V857 (UniProtKB/TrEMBL),   A6JBH5 (UniProtKB/TrEMBL),   A6JBH6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006229335   ⟸   XM_006229273
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017445047   ⟸   XM_017589558
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017445048   ⟸   XM_017589559
- Peptide Label: isoform X2
- UniProtKB: G3V857 (UniProtKB/TrEMBL),   A6JBH5 (UniProtKB/TrEMBL),   A6JBH6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000072497   ⟸   ENSRNOT00000082582
Ensembl Acc Id: ENSRNOP00000022499   ⟸   ENSRNOT00000022499
RefSeq Acc Id: XP_038943472   ⟸   XM_039087544
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063127171   ⟸   XM_063271101
- Peptide Label: isoform X2
- UniProtKB: A6JBH5 (UniProtKB/TrEMBL),   G3V857 (UniProtKB/TrEMBL),   A6JBH6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127148   ⟸   XM_063271078
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063127163   ⟸   XM_063271093
- Peptide Label: isoform X2
- UniProtKB: A6JBH5 (UniProtKB/TrEMBL),   G3V857 (UniProtKB/TrEMBL),   A6JBH6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127140   ⟸   XM_063271070
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063127156   ⟸   XM_063271086
- Peptide Label: isoform X2
- UniProtKB: A6JBH5 (UniProtKB/TrEMBL),   G3V857 (UniProtKB/TrEMBL),   A6JBH6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127175   ⟸   XM_063271105
- Peptide Label: isoform X2
- UniProtKB: A6JBH5 (UniProtKB/TrEMBL),   G3V857 (UniProtKB/TrEMBL),   A6JBH6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127149   ⟸   XM_063271079
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063127137   ⟸   XM_063271067
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063127159   ⟸   XM_063271089
- Peptide Label: isoform X2
- UniProtKB: A6JBH5 (UniProtKB/TrEMBL),   G3V857 (UniProtKB/TrEMBL),   A6JBH6 (UniProtKB/TrEMBL)
Protein Domains
Calponin-homology (CH)   GAR

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-G3V857-F1-model_v2 AlphaFold G3V857 1-314 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1563167 AgrOrtholog
BioCyc Gene G2FUF-59532 BioCyc
Ensembl Genes ENSRNOG00000016717 Ensembl, UniProtKB/TrEMBL
  ENSRNOG00000078851 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000022499.8 UniProtKB/TrEMBL
  ENSRNOT00000082582.3 UniProtKB/TrEMBL
Gene3D-CATH 1.10.418.10 UniProtKB/TrEMBL
  3.30.920.20 UniProtKB/TrEMBL
InterPro Calponin-like_dom_sf UniProtKB/TrEMBL
  CH-domain UniProtKB/TrEMBL
  GAR_dom_sf UniProtKB/TrEMBL
  GAS2_dom UniProtKB/TrEMBL
KEGG Report rno:499156 UniProtKB/TrEMBL
NCBI Gene 499156 ENTREZGENE
PANTHER PTHR46756:SF9 UniProtKB/TrEMBL
  TRANSGELIN UniProtKB/TrEMBL
Pfam GAS2 UniProtKB/TrEMBL
  PF00307 UniProtKB/TrEMBL
PhenoGen Gas2 PhenoGen
PROSITE GAR UniProtKB/TrEMBL
  PS50021 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000016717 RatGTEx
  ENSRNOG00000078851 RatGTEx
SMART GAS2 UniProtKB/TrEMBL
  SM00033 UniProtKB/TrEMBL
Superfamily-SCOP Calponin-homology UniProtKB/TrEMBL
  SSF143575 UniProtKB/TrEMBL
UniProt A6JBH5 ENTREZGENE, UniProtKB/TrEMBL
  A6JBH6 ENTREZGENE, UniProtKB/TrEMBL
  G3V857 ENTREZGENE, UniProtKB/TrEMBL
  Q568Y1_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-06 Gas2  growth arrest-specific 2  RGD1563167_predicted  similar to growth arrest-specific protein 2 - mouse (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1563167_predicted  similar to growth arrest-specific protein 2 - mouse (predicted)  LOC499156  similar to growth arrest-specific protein 2 - mouse  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC499156  similar to growth arrest-specific protein 2 - mouse      Symbol and Name status set to provisional 70820 PROVISIONAL