Aig1 (androgen-induced 1) - Rat Genome Database

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Gene: Aig1 (androgen-induced 1) Rattus norvegicus
Analyze
Symbol: Aig1
Name: androgen-induced 1
RGD ID: 1562920
Description: Predicted to enable hydrolase activity. Predicted to be involved in long-chain fatty acid catabolic process. Predicted to be located in membrane. Predicted to be active in endomembrane system. Orthologous to human AIG1 (androgen induced 1); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: androgen-induced gene 1 protein; LOC292486; RGD1562920; similar to Aig1 protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr819,866,546 - 10,089,454 (-)NCBIGRCr8
mRatBN7.218,046,430 - 8,269,276 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl18,046,430 - 8,269,084 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx17,743,293 - 7,973,213 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0113,742,416 - 13,972,354 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.018,025,858 - 8,249,110 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.017,816,841 - 8,038,805 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl17,816,838 - 8,038,665 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.019,445,188 - 9,665,474 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.418,456,587 - 8,688,694 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera16,534,096 - 6,755,228 (-)NCBICelera
Cytogenetic Map1p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1-naphthyl isothiocyanate  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-methylcholine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (EXP)
9-hydroxyoctadecanoic acid  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
amitrole  (EXP)
amphetamine  (EXP)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
atrazine  (ISO)
azoxystrobin  (EXP)
benzo[a]pyrene  (ISO)
Benzo[k]fluoranthene  (ISO)
bisphenol A  (EXP,ISO)
buspirone  (EXP)
calcitriol  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (EXP,ISO)
choline  (ISO)
ciprofibrate  (ISO)
cisplatin  (ISO)
clofibrate  (EXP)
cyclosporin A  (ISO)
dexamethasone  (ISO)
dibutyl phthalate  (EXP)
dichloroacetic acid  (ISO)
dicrotophos  (ISO)
dorsomorphin  (ISO)
fenofibrate  (EXP)
ferric oxide  (ISO)
finasteride  (EXP)
flutamide  (EXP)
folic acid  (ISO)
formaldehyde  (ISO)
gentamycin  (EXP)
glyphosate  (EXP)
imidacloprid  (EXP)
indometacin  (ISO)
L-methionine  (ISO)
leflunomide  (EXP)
methapyrilene  (EXP)
methimazole  (EXP)
methoxychlor  (EXP)
N,N-diethyl-m-toluamide  (EXP)
nefazodone  (EXP)
nimesulide  (EXP)
O-methyleugenol  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP)
permethrin  (EXP)
phenylmercury acetate  (ISO)
piperonyl butoxide  (EXP)
pirinixic acid  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
quercetin  (ISO)
rotenone  (EXP)
SB 431542  (ISO)
silicon dioxide  (ISO)
sulfadimethoxine  (EXP)
sunitinib  (ISO)
temozolomide  (ISO)
tetrachloroethene  (ISO)
thiabendazole  (EXP)
thioacetamide  (EXP)
trichloroethene  (EXP)
trichostatin A  (ISO)
valdecoxib  (EXP)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:27018888  


Genomics

Comparative Map Data
Aig1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr819,866,546 - 10,089,454 (-)NCBIGRCr8
mRatBN7.218,046,430 - 8,269,276 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl18,046,430 - 8,269,084 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx17,743,293 - 7,973,213 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0113,742,416 - 13,972,354 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.018,025,858 - 8,249,110 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.017,816,841 - 8,038,805 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl17,816,838 - 8,038,665 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.019,445,188 - 9,665,474 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.418,456,587 - 8,688,694 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera16,534,096 - 6,755,228 (-)NCBICelera
Cytogenetic Map1p13NCBI
AIG1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386143,059,213 - 143,343,883 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6143,060,496 - 143,341,058 (+)EnsemblGRCh38hg38GRCh38
GRCh376143,380,350 - 143,665,020 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 366143,423,716 - 143,703,134 (+)NCBINCBI36Build 36hg18NCBI36
Build 346143,423,715 - 143,703,134NCBI
Celera6144,122,434 - 144,401,847 (+)NCBICelera
Cytogenetic Map6q24.2NCBI
HuRef6140,946,083 - 141,225,487 (+)NCBIHuRef
CHM1_16143,644,596 - 143,924,037 (+)NCBICHM1_1
T2T-CHM13v2.06144,251,637 - 144,536,274 (+)NCBIT2T-CHM13v2.0
Aig1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391013,522,798 - 13,744,980 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1013,522,798 - 13,744,724 (-)EnsemblGRCm39 Ensembl
GRCm381013,647,054 - 13,869,038 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1013,647,054 - 13,868,980 (-)EnsemblGRCm38mm10GRCm38
MGSCv371013,372,515 - 13,588,636 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361013,342,907 - 13,559,028 (-)NCBIMGSCv36mm8
Celera1013,560,681 - 13,779,286 (-)NCBICelera
Cytogenetic Map10A2NCBI
cM Map105.08NCBI
Aig1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543617,056,843 - 17,285,022 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543617,056,630 - 17,285,022 (-)NCBIChiLan1.0ChiLan1.0
AIG1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25163,035,093 - 163,371,644 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16160,929,833 - 161,217,807 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06140,828,806 - 141,116,373 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16145,553,009 - 145,837,677 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6145,553,306 - 145,837,049 (+)Ensemblpanpan1.1panPan2
AIG1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1134,643,994 - 34,884,445 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl134,643,764 - 34,884,119 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha135,541,853 - 35,782,595 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0134,819,244 - 35,059,897 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl134,810,926 - 35,059,489 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1134,688,173 - 34,928,736 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0134,570,772 - 34,811,562 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0134,882,484 - 35,123,150 (+)NCBIUU_Cfam_GSD_1.0
Aig1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946129,607,540 - 129,845,341 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366252,790,841 - 3,027,935 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366252,790,215 - 3,028,135 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AIG1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl121,913,239 - 22,165,083 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1121,913,237 - 22,165,078 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2124,300,407 - 24,621,623 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AIG1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11329,903,099 - 30,180,050 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1330,078,019 - 30,180,012 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660402,035,062 - 2,309,265 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aig1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475310,914,540 - 11,175,768 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475310,917,856 - 11,175,696 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Aig1
1249 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:285
Count of miRNA genes:200
Interacting mature miRNAs:227
Transcripts:ENSRNOT00000046539
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354647Despr8Despair related QTL 80.0000341locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1124744506Rat
2298546Neuinf4Neuroinflammation QTL 45.1nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)1128736750Rat
2313053Bss51Bone structure and strength QTL 513.80.0001tibia length (VT:0004357)tibia length (CMO:0000450)1132356093Rat
2313070Bss52Bone structure and strength QTL 524.40.0001body length (VT:0001256)body length (CMO:0000013)1132356093Rat
2313090Bmd69Bone mineral density QTL 694.40.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)1132356093Rat
738020Pia8Pristane induced arthritis QTL 84.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1165833076Rat
1578650Bmd6Bone mineral density QTL 612.2femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)150910843284926Rat
1578651Bmd7Bone mineral density QTL 714.2femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)150910843284926Rat
1578669Bss9Bone structure and strength QTL 96.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)150910843284926Rat
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)150910886060548Rat
1600360Mcs16Mammary carcinoma susceptibility QTL 162.4mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1224439043433040Rat
1300170Rf6Renal function QTL 63.14renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)1416280711481482Rat
7421626Bp360Blood pressure QTL 3600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1439328949393289Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
4889451Eae29Experimental allergic encephalomyelitis QTL 295.51nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)1592587724697545Rat

Markers in Region
D1Rat388  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218,086,468 - 8,086,692 (+)MAPPERmRatBN7.2
Rnor_6.017,855,813 - 7,856,036NCBIRnor6.0
Rnor_5.019,482,668 - 9,482,891UniSTSRnor5.0
RGSC_v3.418,503,976 - 8,504,199UniSTSRGSC3.4
RGSC_v3.418,503,976 - 8,504,199RGDRGSC3.4
RGSC_v3.118,503,976 - 8,504,199RGD
Celera16,572,802 - 6,573,025UniSTS
SHRSP x BN Map16.99UniSTS
SHRSP x BN Map16.99RGD
Cytogenetic Map1p13UniSTS
RH128712  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218,046,813 - 8,046,992 (+)MAPPERmRatBN7.2
Rnor_6.017,817,225 - 7,817,403NCBIRnor6.0
Rnor_5.019,445,572 - 9,445,750UniSTSRnor5.0
RGSC_v3.418,456,971 - 8,457,149UniSTSRGSC3.4
Celera16,534,480 - 6,534,658UniSTS
RH 3.4 Map1102.5UniSTS
Cytogenetic Map1p13UniSTS
RH128951  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218,046,484 - 8,046,675 (+)MAPPERmRatBN7.2
Rnor_6.017,816,896 - 7,817,086NCBIRnor6.0
Rnor_5.019,445,243 - 9,445,433UniSTSRnor5.0
RGSC_v3.418,456,642 - 8,456,832UniSTSRGSC3.4
Celera16,534,151 - 6,534,341UniSTS
RH 3.4 Map1104.1UniSTS
Cytogenetic Map1p13UniSTS
RH143713  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218,046,486 - 8,046,586 (+)MAPPERmRatBN7.2
Rnor_6.017,816,898 - 7,816,997NCBIRnor6.0
Rnor_5.019,445,245 - 9,445,344UniSTSRnor5.0
RGSC_v3.418,456,644 - 8,456,743UniSTSRGSC3.4
Celera16,534,153 - 6,534,252UniSTS
RH 3.4 Map1104.4UniSTS
Cytogenetic Map1p13UniSTS
AW535138  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218,141,968 - 8,142,153 (+)MAPPERmRatBN7.2
Rnor_6.017,911,430 - 7,911,614NCBIRnor6.0
Rnor_5.019,538,311 - 9,538,495UniSTSRnor5.0
RGSC_v3.418,560,467 - 8,560,651UniSTSRGSC3.4
Celera16,628,170 - 6,628,354UniSTS
RH 3.4 Map1101.72UniSTS
Cytogenetic Map1p13UniSTS
BQ195873  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218,052,566 - 8,052,773 (+)MAPPERmRatBN7.2
Rnor_6.017,822,978 - 7,823,184NCBIRnor6.0
Rnor_5.019,451,325 - 9,451,531UniSTSRnor5.0
RGSC_v3.418,462,724 - 8,462,930UniSTSRGSC3.4
Celera16,540,233 - 6,540,439UniSTS
RH 3.4 Map1104.6UniSTS
Cytogenetic Map1p13UniSTS
BM387506  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218,199,572 - 8,199,727 (+)MAPPERmRatBN7.2
Rnor_6.017,968,856 - 7,969,010NCBIRnor6.0
Rnor_5.019,595,756 - 9,595,910UniSTSRnor5.0
RGSC_v3.418,619,028 - 8,619,182UniSTSRGSC3.4
Celera16,686,000 - 6,686,154UniSTS
RH 3.4 Map1102.32UniSTS
Cytogenetic Map1p13UniSTS
UMNe507  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218,126,824 - 8,127,512 (+)MAPPERmRatBN7.2
mRatBN7.218,127,032 - 8,127,512 (+)MAPPERmRatBN7.2
Rnor_6.017,896,228 - 7,896,915NCBIRnor6.0
Rnor_6.017,896,436 - 7,896,915NCBIRnor6.0
Rnor_5.019,523,291 - 9,523,770UniSTSRnor5.0
Rnor_5.019,523,083 - 9,523,770UniSTSRnor5.0
RGSC_v3.418,545,478 - 8,545,957UniSTSRGSC3.4
RGSC_v3.418,545,270 - 8,545,957UniSTSRGSC3.4
Cytogenetic Map1p13UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 28 32 16 19 16 74 20 36 11
Low 15 25 25 25 8 11 15 5 8
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001134425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006227642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008758604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005500901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010064541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC167098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ213348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ228352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ228880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000046539   ⟹   ENSRNOP00000039627
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl18,046,430 - 8,269,084 (-)Ensembl
Rnor_6.0 Ensembl17,816,838 - 8,038,665 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000096423   ⟹   ENSRNOP00000081288
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl18,046,430 - 8,269,084 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000100561   ⟹   ENSRNOP00000081707
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl18,046,433 - 8,269,003 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000105839   ⟹   ENSRNOP00000083390
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl18,203,336 - 8,269,084 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000111898   ⟹   ENSRNOP00000083252
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl18,047,058 - 8,269,084 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000114127   ⟹   ENSRNOP00000091332
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl18,052,478 - 8,269,084 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000118508   ⟹   ENSRNOP00000077720
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl18,089,901 - 8,269,049 (-)Ensembl
RefSeq Acc Id: NM_001134425   ⟹   NP_001127897
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr819,866,546 - 10,089,083 (-)NCBI
mRatBN7.218,046,430 - 8,268,952 (-)NCBI
Rnor_6.017,816,841 - 8,038,609 (-)NCBI
Rnor_5.019,445,188 - 9,665,474 (-)NCBI
RGSC_v3.418,456,587 - 8,688,694 (-)RGD
Celera16,534,096 - 6,755,228 (-)RGD
Sequence:
RefSeq Acc Id: XM_006227642   ⟹   XP_006227704
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr819,872,347 - 10,089,279 (-)NCBI
mRatBN7.218,050,032 - 8,269,167 (-)NCBI
Rnor_6.017,817,503 - 8,038,805 (-)NCBI
Rnor_5.019,445,188 - 9,665,474 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008758604   ⟹   XP_008756826
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr819,984,089 - 10,089,278 (-)NCBI
mRatBN7.218,192,575 - 8,269,155 (-)NCBI
Rnor_6.017,957,154 - 8,038,801 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039103609   ⟹   XP_038959537
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr819,872,347 - 10,089,391 (-)NCBI
mRatBN7.218,050,032 - 8,269,276 (-)NCBI
RefSeq Acc Id: XM_039103610   ⟹   XP_038959538
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr819,872,347 - 10,089,373 (-)NCBI
mRatBN7.218,050,032 - 8,269,266 (-)NCBI
RefSeq Acc Id: XM_039103611   ⟹   XP_038959539
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr819,866,546 - 10,089,454 (-)NCBI
mRatBN7.218,046,430 - 8,269,152 (-)NCBI
RefSeq Acc Id: XM_039103617   ⟹   XP_038959545
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr819,866,546 - 10,089,277 (-)NCBI
mRatBN7.218,046,430 - 8,269,151 (-)NCBI
RefSeq Acc Id: XM_039103624   ⟹   XP_038959552
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8110,019,386 - 10,089,370 (-)NCBI
mRatBN7.218,200,735 - 8,269,264 (-)NCBI
RefSeq Acc Id: XM_039103626   ⟹   XP_038959554
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr819,872,347 - 9,917,477 (-)NCBI
mRatBN7.218,050,032 - 8,097,483 (-)NCBI
RefSeq Acc Id: XM_039103631   ⟹   XP_038959559
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8110,024,114 - 10,089,283 (-)NCBI
mRatBN7.218,203,973 - 8,269,225 (-)NCBI
RefSeq Acc Id: XR_005500901
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr819,873,491 - 10,089,276 (-)NCBI
mRatBN7.218,053,402 - 8,269,150 (-)NCBI
RefSeq Acc Id: XR_010064540
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr819,984,089 - 10,089,402 (-)NCBI
RefSeq Acc Id: XR_010064541
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr819,984,089 - 10,089,278 (-)NCBI
RefSeq Acc Id: NP_001127897   ⟸   NM_001134425
- UniProtKB: B2RZC0 (UniProtKB/TrEMBL),   A6JP64 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006227704   ⟸   XM_006227642
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ABV0 (UniProtKB/TrEMBL),   A6JP64 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008756826   ⟸   XM_008758604
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: ENSRNOP00000039627   ⟸   ENSRNOT00000046539
RefSeq Acc Id: XP_038959539   ⟸   XM_039103611
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038959545   ⟸   XM_039103617
- Peptide Label: isoform X5
- UniProtKB: A0A8I5ZRM1 (UniProtKB/TrEMBL),   A0A8I5ZTN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038959537   ⟸   XM_039103609
- Peptide Label: isoform X2
- UniProtKB: A6JP64 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038959538   ⟸   XM_039103610
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038959554   ⟸   XM_039103626
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038959552   ⟸   XM_039103624
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038959559   ⟸   XM_039103631
- Peptide Label: isoform X8
RefSeq Acc Id: ENSRNOP00000083390   ⟸   ENSRNOT00000105839
RefSeq Acc Id: ENSRNOP00000077720   ⟸   ENSRNOT00000118508
RefSeq Acc Id: ENSRNOP00000081707   ⟸   ENSRNOT00000100561
RefSeq Acc Id: ENSRNOP00000081288   ⟸   ENSRNOT00000096423
RefSeq Acc Id: ENSRNOP00000091332   ⟸   ENSRNOT00000114127
RefSeq Acc Id: ENSRNOP00000083252   ⟸   ENSRNOT00000111898

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B2RZC0-F1-model_v2 AlphaFold B2RZC0 1-238 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13689498
Promoter ID:EPDNEW_R23
Type:initiation region
Name:Aig1_1
Description:androgen-induced 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.018,038,760 - 8,038,820EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1562920 AgrOrtholog
BioCyc Gene G2FUF-62355 BioCyc
Ensembl Genes ENSRNOG00000010753 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000046539 ENTREZGENE
  ENSRNOT00000046539.6 UniProtKB/TrEMBL
  ENSRNOT00000096423.1 UniProtKB/TrEMBL
  ENSRNOT00000100561.1 UniProtKB/TrEMBL
  ENSRNOT00000105839.1 UniProtKB/TrEMBL
  ENSRNOT00000111898.1 UniProtKB/TrEMBL
  ENSRNOT00000114127.1 UniProtKB/TrEMBL
  ENSRNOT00000118508.1 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7319120 IMAGE-MGC_LOAD
InterPro Far-17a_AIG1 UniProtKB/TrEMBL
KEGG Report rno:292486 UniProtKB/TrEMBL
MGC_CLONE MGC:189539 IMAGE-MGC_LOAD
NCBI Gene 292486 ENTREZGENE
PANTHER ANDROGEN-INDUCED GENE 1 PROTEIN UniProtKB/TrEMBL
  PTHR10989 UniProtKB/TrEMBL
Pfam Far-17a_AIG1 UniProtKB/TrEMBL
PhenoGen Aig1 PhenoGen
RatGTEx ENSRNOG00000010753 RatGTEx
UniProt A0A8I5YC05_RAT UniProtKB/TrEMBL
  A0A8I5ZRM1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZTN0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZWH5_RAT UniProtKB/TrEMBL
  A0A8I5ZZM6_RAT UniProtKB/TrEMBL
  A0A8I6ABV0 ENTREZGENE, UniProtKB/TrEMBL
  A6JP64 ENTREZGENE, UniProtKB/TrEMBL
  B2RZC0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-06 Aig1  androgen-induced 1  RGD1562920_predicted  similar to Aig1 protein (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1562920_predicted  similar to Aig1 protein (predicted)  LOC292486  similar to Aig1 protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC292486  similar to Aig1 protein      Symbol and Name status set to provisional 70820 PROVISIONAL