Rerg (RAS-like, estrogen-regulated, growth-inhibitor) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Rerg (RAS-like, estrogen-regulated, growth-inhibitor) Rattus norvegicus
Analyze
Symbol: Rerg
Name: RAS-like, estrogen-regulated, growth-inhibitor
RGD ID: 1562829
Description: Predicted to enable GDP binding activity; GTP binding activity; and GTPase activity. Predicted to be involved in negative regulation of cell growth; negative regulation of cell population proliferation; and response to hormone. Predicted to be located in cytosol and nucleus. Predicted to be active in plasma membrane. Orthologous to human RERG (RAS like estrogen regulated growth inhibitor); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC502916; ras-related and estrogen-regulated growth inhibitor; RGD1562829; similar to RAS-like, estrogen-regulated, growth-inhibitor
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84171,712,794 - 171,821,268 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl4171,712,794 - 171,820,903 (-)EnsemblGRCr8
mRatBN7.24169,981,634 - 170,089,777 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4169,982,279 - 170,089,715 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx4176,272,579 - 176,380,808 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04172,058,062 - 172,166,158 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04170,678,240 - 170,786,470 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.04171,069,161 - 171,176,678 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4171,069,191 - 171,176,581 (-)Ensemblrn6Rnor6.0
Rnor_5.04235,326,498 - 235,433,862 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.44174,125,313 - 174,140,346 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera4158,562,739 - 158,670,744 (-)NCBICelera
Cytogenetic Map4q43NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-methylcholanthrene  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (EXP)
7,12-dimethyltetraphene  (EXP)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (EXP)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
atrazine  (EXP)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium dichloride  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (ISO)
choline  (ISO)
cisplatin  (ISO)
copper(II) chloride  (ISO)
coumestrol  (ISO)
Cuprizon  (EXP)
cytarabine  (ISO)
DDE  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP,ISO)
dorsomorphin  (ISO)
Enterolactone  (ISO)
ethanol  (ISO)
folic acid  (ISO)
fonofos  (ISO)
fulvestrant  (ISO)
genistein  (ISO)
gentamycin  (EXP)
indometacin  (ISO)
L-methionine  (ISO)
lead diacetate  (ISO)
methimazole  (EXP)
methylmercury chloride  (EXP,ISO)
nickel atom  (ISO)
Nutlin-3  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
parathion  (ISO)
perfluorooctanoic acid  (EXP)
phenobarbital  (EXP,ISO)
raloxifene  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
tamoxifen  (ISO)
terbufos  (ISO)
thiram  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
triclosan  (ISO)
trimellitic anhydride  (ISO)
valproic acid  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
cytosol  (IEA,ISO)
nucleus  (IEA,ISO)
plasma membrane  (IBA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. RERG is a novel ras-related, estrogen-regulated and growth-inhibitory gene in breast cancer. Finlin BS, etal., J Biol Chem 2001 Nov 9;276(45):42259-67. Epub 2001 Aug 31.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:30361391  


Genomics

Comparative Map Data
Rerg
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84171,712,794 - 171,821,268 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl4171,712,794 - 171,820,903 (-)EnsemblGRCr8
mRatBN7.24169,981,634 - 170,089,777 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4169,982,279 - 170,089,715 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx4176,272,579 - 176,380,808 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04172,058,062 - 172,166,158 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04170,678,240 - 170,786,470 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.04171,069,161 - 171,176,678 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4171,069,191 - 171,176,581 (-)Ensemblrn6Rnor6.0
Rnor_5.04235,326,498 - 235,433,862 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.44174,125,313 - 174,140,346 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera4158,562,739 - 158,670,744 (-)NCBICelera
Cytogenetic Map4q43NCBI
RERG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381215,107,783 - 15,221,417 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1215,107,783 - 15,348,675 (-)Ensemblhg38GRCh38
GRCh371215,260,717 - 15,374,351 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361215,151,984 - 15,265,571 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341215,151,984 - 15,265,571NCBI
Celera1220,405,694 - 20,519,355 (-)NCBICelera
Cytogenetic Map12p12.3NCBI
HuRef1215,030,035 - 15,143,674 (-)NCBIHuRef
CHM1_11215,226,796 - 15,340,491 (-)NCBICHM1_1
T2T-CHM13v2.01214,985,067 - 15,098,688 (-)NCBIT2T-CHM13v2.0
Rerg
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396137,031,822 - 137,147,494 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6137,031,823 - 137,147,495 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm386137,054,825 - 137,170,496 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6137,054,825 - 137,170,497 (-)Ensemblmm10GRCm38
MGSCv376137,003,346 - 137,119,017 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv366137,019,021 - 137,134,697 (-)NCBIMGSCv36mm8
Celera6140,116,974 - 140,233,486 (-)NCBICelera
Cytogenetic Map6G1NCBI
cM Map666.73NCBI
Rerg
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541311,825,235 - 11,940,804 (-)Ensembl
ChiLan1.0NW_00495541311,825,235 - 11,940,390 (-)NCBIChiLan1.0ChiLan1.0
RERG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21020,562,594 - 20,675,497 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11220,559,363 - 20,672,258 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01215,116,892 - 15,229,737 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11215,513,205 - 15,626,000 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1215,513,205 - 15,626,563 (-)EnsemblpanPan2panpan1.1
RERG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12731,413,464 - 31,526,838 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2731,417,487 - 31,525,496 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2714,922,249 - 15,035,618 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02731,720,047 - 31,833,407 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2731,720,058 - 31,833,394 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12731,609,972 - 31,723,202 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02731,567,927 - 31,681,388 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02714,654,499 - 14,767,650 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Rerg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494592,549,893 - 92,668,571 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365872,277,427 - 2,396,218 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365872,277,548 - 2,396,206 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RERG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl557,349,382 - 57,462,804 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1557,349,386 - 57,462,813 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2560,736,648 - 60,851,694 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RERG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11115,008,557 - 15,121,538 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1115,008,524 - 15,121,233 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366606920,187,091 - 20,300,246 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rerg
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475222,783,519 - 22,928,070 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462475222,780,248 - 22,929,395 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Rerg
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1612,338,160 - 12,357,727 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Rerg
806 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:52
Count of miRNA genes:49
Interacting mature miRNAs:51
Transcripts:ENSRNOT00000030850
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4146370897184426481Rat
724558Plsm2Polydactyly-luxate syndrome (PLS) morphotypes QTL 20.0003hindlimb integrity trait (VT:0010563)hind foot phalanges count (CMO:0001949)4134095016179095016Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4146370897184426481Rat
6478757Anxrr44Anxiety related response QTL 440.01087locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
1358364Sradr4Stress Responsive Adrenal Weight QTL 44.92adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)4131384565176384565Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4140059299181024663Rat
6478700Anxrr33Anxiety related response QTL 330.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat
1298524Oia8Oil induced arthritis QTL 8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4140059299184426481Rat
10053718Scort25Serum corticosterone level QTL 252.150.0097blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)4157292416184426481Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)460916264184426481Rat
7411558Bw133Body weight QTL 13313.840.001body mass (VT:0001259)body weight gain (CMO:0000420)4127263297172263297Rat
10401796Kidm48Kidney mass QTL 48kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)4147299608184426481Rat
6478718Anxrr34Anxiety related response QTL 340.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat
6478782Anxrr52Anxiety related response QTL 520.02091locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
6478720Alc23Alcohol consumption QTL 230.00509drinking behavior trait (VT:0001422)ethanol drink intake rate to body weight ratio (CMO:0001616)4155834926184426481Rat
6478785Anxrr53Anxiety related response QTL 530.01397locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
738031Alc14Alcohol consumption QTL 147.60.00003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)460916264174095838Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)4100752691179366077Rat
1581566Eae21Experimental allergic encephalomyelitis QTL 216.2body mass (VT:0001259)maximum body weight loss to initial body weight ratio (CMO:0001400)4137447185182447185Rat
1578674Bmd12Bone mineral density QTL 123.8femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)4137430611182430611Rat
6478728Anxrr36Anxiety related response QTL 360.01061locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)460916264184426481Rat
634342Cia24Collagen induced arthritis QTL 244.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4148121375176967367Rat
6478733Anxrr37Anxiety related response QTL 370.00095locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
61362Oia2Oil induced arthritis QTL 20.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4140059299184426481Rat
6478737Anxrr38Anxiety related response QTL 380.00159locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4155834926184426481Rat
2293659Bmd35Bone mineral density QTL 354.50.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)4160623982184426481Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)412212457182430611Rat
6478748Anxrr42Anxiety related response QTL 420.28008locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4146370897184426481Rat

Markers in Region
BE106903  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24169,989,172 - 169,989,378 (+)MAPPERmRatBN7.2
Rnor_6.04171,076,691 - 171,076,896NCBIRnor6.0
Rnor_5.04235,333,933 - 235,334,138UniSTSRnor5.0
RGSC_v3.44174,132,923 - 174,133,128UniSTSRGSC3.4
Celera4158,570,186 - 158,570,391UniSTS
RH 3.4 Map41023.0UniSTS
Cytogenetic Map4q43-q44UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
17 13 79 192 91 90 59 143 59 6 450 264 21 163 102 122 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000030850   ⟹   ENSRNOP00000028930
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl4171,712,794 - 171,820,883 (-)Ensembl
mRatBN7.2 Ensembl4169,982,279 - 170,089,715 (-)Ensembl
Rnor_6.0 Ensembl4171,069,191 - 171,176,581 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000101127   ⟹   ENSRNOP00000080904
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl4171,712,794 - 171,820,903 (-)Ensembl
mRatBN7.2 Ensembl4169,982,279 - 170,084,926 (-)Ensembl
RefSeq Acc Id: NM_001398929   ⟹   NP_001385858
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84171,712,794 - 171,820,883 (-)NCBI
mRatBN7.24169,981,635 - 170,089,739 (-)NCBI
RefSeq Acc Id: XM_006237582   ⟹   XP_006237644
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84171,712,797 - 171,821,268 (-)NCBI
mRatBN7.24169,981,634 - 170,089,777 (-)NCBI
Rnor_6.04171,069,161 - 171,176,678 (-)NCBI
Rnor_5.04235,326,498 - 235,433,862 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001385858 (Get FASTA)   NCBI Sequence Viewer  
  XP_006237644 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM01588 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000028930
  ENSRNOP00000028930.3
  ENSRNOP00000080904.1
RefSeq Acc Id: XP_006237644   ⟸   XM_006237582
- Peptide Label: isoform X1
- UniProtKB: F1M2G3 (UniProtKB/TrEMBL),   A6IMK1 (UniProtKB/TrEMBL),   A0A8I5ZRS4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000028930   ⟸   ENSRNOT00000030850
Ensembl Acc Id: ENSRNOP00000080904   ⟸   ENSRNOT00000101127
RefSeq Acc Id: NP_001385858   ⟸   NM_001398929
- UniProtKB: F1M2G3 (UniProtKB/TrEMBL),   A6IMK1 (UniProtKB/TrEMBL),   A0A8I5ZRS4 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1M2G3-F1-model_v2 AlphaFold F1M2G3 1-199 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13693471
Promoter ID:EPDNEW_R3995
Type:initiation region
Name:Rerg_1
Description:RAS-like, estrogen-regulated, growth-inhibitor
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.04171,176,613 - 171,176,673EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1562829 AgrOrtholog
BioCyc Gene G2FUF-42582 BioCyc
Ensembl Genes ENSRNOG00000027592 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000030850 ENTREZGENE
  ENSRNOT00000030850.6 UniProtKB/TrEMBL
  ENSRNOT00000101127.2 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
InterPro P-loop_NTPase UniProtKB/TrEMBL
  Ras-related_GTPase UniProtKB/TrEMBL
  Small_GTP-bd_dom UniProtKB/TrEMBL
  Small_GTPase UniProtKB/TrEMBL
NCBI Gene 502916 ENTREZGENE
PANTHER RAS-LIKE FAMILY MEMBER 11 UniProtKB/TrEMBL
Pfam Ras UniProtKB/TrEMBL
PhenoGen Rerg PhenoGen
PRINTS RASTRNSFRMNG UniProtKB/TrEMBL
PROSITE RAB UniProtKB/TrEMBL
  RAS UniProtKB/TrEMBL
  RHO UniProtKB/TrEMBL
RatGTEx ENSRNOG00000027592 RatGTEx
SMART RAB UniProtKB/TrEMBL
  RAS UniProtKB/TrEMBL
  RHO UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A8I5ZRS4 ENTREZGENE, UniProtKB/TrEMBL
  A6IMK1 ENTREZGENE, UniProtKB/TrEMBL
  F1M2G3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-02-29 Rerg  RAS-like, estrogen-regulated, growth-inhibitor  RGD1562829_predicted  similar to RAS-like, estrogen-regulated, growth-inhibitor (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1562829_predicted  similar to RAS-like, estrogen-regulated, growth-inhibitor (predicted)  LOC502916  similar to RAS-like, estrogen-regulated, growth-inhibitor  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC502916  similar to RAS-like, estrogen-regulated, growth-inhibitor      Symbol and Name status set to provisional 70820 PROVISIONAL