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Gene: Myo18a (myosin XVIIIa) Rattus norvegicus

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Symbol:

Myo18a

Name:

myosin XVIIIa

RGD ID:

1562698

Description:

Predicted to enable ADP binding activity; ATP binding activity; and actin filament binding activity. Predicted to be involved in several processes, including asymmetric Golgi ribbon formation; canonical NF-kappaB signal transduction; and positive regulation of transport. Predicted to act upstream of or within cellular response to type II interferon. Predicted to be located in several cellular components, including actomyosin; brush border; and trans-Golgi network. Predicted to be part of myosin II complex. Predicted to be active in cytoplasm and myosin filament. Orthologous to human MYO18A (myosin XVIIIA); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol; acetamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

basic salivary proline-rich protein 1-like; basic salivary proline-rich protein 2-like; LOC103693393; LOC360570; myosin 18a; similar to myosin XVIIIa; unconventional myosin-XVIIIa

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MYO18A (myosin XVIIIA)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Myo18a (myosin XVIIIA)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Myo18a (myosin XVIIIA)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MYO18A (myosin XVIIIA)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MYO18A (myosin XVIIIA)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Myo18a (myosin XVIIIA)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MYO18A (myosin XVIIIA)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Myo18a (myosin XVIIIA)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Myo18a (myosin XVIIIA)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Myo18a (myosin XVIIIA)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Myo18a (myosin XVIIIA)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	MYO18A (myosin XVIIIA)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	MYO18A (myosin XVIIIA)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	myo18aa (myosin XVIIIAa)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	myo18aa (myosin XVIIIAa)	Alliance	DIOPT (Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	myo18ab (myosin XVIIIAb)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	myo18ab (myosin XVIIIAb)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Mhcl	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Mhcl	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	63,152,303 - 63,253,543 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	63,152,103 - 63,253,543 (+)	Ensembl				GRCr8
mRatBN7.2	10	62,654,218 - 62,755,465 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	62,654,281 - 62,755,468 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	67,286,116 - 67,386,748 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	66,791,627 - 66,892,122 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	62,261,757 - 62,362,375 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	64,979,770 - 65,080,535 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	64,979,770 - 65,080,535 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	66,545,745 - 66,646,100 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	63,818,690 - 63,906,414 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	61,634,525 - 61,734,518 (+)	NCBI		Celera
Cytogenetic Map	10	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Hydrops Fetalis (ISO)

prostate cancer (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,6-dimethoxyphenol (ISO)

3,4-methylenedioxymethamphetamine (ISO)

3-chloropropane-1,2-diol (EXP)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

5-aza-2'-deoxycytidine (ISO)

acetamide (EXP)

acrylamide (ISO)

aflatoxin B1 (EXP,ISO)

Aflatoxin B2 alpha (ISO)

aminoglutethimide (ISO)

amphetamine (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

beauvericin (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bis(2-chloroethyl) sulfide (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

Bufotalin (ISO)

butanal (ISO)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

carbon nanotube (ISO)

cisplatin (ISO)

copper(II) sulfate (ISO)

coumarin (ISO)

crocidolite asbestos (ISO)

curcumin (ISO)

DDE (ISO)

diarsenic trioxide (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

elemental selenium (ISO)

ethanol (ISO)

flutamide (EXP)

folic acid (ISO)

FR900359 (ISO)

furfural (ISO)

genistein (ISO)

glafenine (EXP)

inulin (ISO)

methamphetamine (ISO)

methapyrilene (ISO)

methidathion (ISO)

mono(2-ethylhexyl) phthalate (ISO)

nickel sulfate (ISO)

p-menthan-3-ol (ISO)

paracetamol (EXP,ISO)

pentanal (ISO)

perfluorooctane-1-sulfonic acid (ISO)

resveratrol (ISO)

selenium atom (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium chloride (ISO)

sodium fluoride (ISO)

sunitinib (ISO)

tamoxifen (ISO)

temozolomide (ISO)

tetrachloromethane (EXP,ISO)

triclosan (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

troglitazone (ISO)

tungsten (ISO)

valproic acid (EXP,ISO)

vanadium atom (ISO)

vanadium(0) (ISO)

vinclozolin (EXP)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actomyosin structure organization (IEA,ISO)

asymmetric Golgi ribbon formation (IEA,ISO)

canonical NF-kappaB signal transduction (ISO)

cell migration (IEA,ISO)

cellular response to type II interferon (ISO)

Golgi organization (IEA,ISO)

Golgi ribbon formation (IEA,ISO)

Golgi vesicle budding (IEA,ISO)

negative regulation of apoptotic process (IEA,ISO)

positive regulation of opsonization (IEA,ISO)

positive regulation of protein secretion (IEA,ISO)

regulation of macrophage activation (IEA,ISO)

Cellular Component

actomyosin (IEA,ISO)

brush border (ISO)

cytoplasm (IBA,IEA)

cytoskeleton (IEA,ISO)

Golgi apparatus (IEA)

Golgi membrane (IEA)

microtubule organizing center (IEA)

myosin complex (IEA)

myosin filament (IBA)

myosin II complex (IBA)

phagocytic vesicle (ISO)

trans-Golgi network (IEA,ISO)

Molecular Function

actin binding (IEA)

actin filament binding (IBA,IEA,ISO)

ADP binding (IEA,ISO)

ATP binding (IEA,ISO)

ATP hydrolysis activity (ISO)

cytoskeletal motor activity (IEA)

nucleotide binding (IEA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:10733906	PMID:16087679	PMID:18854160	PMID:19144319	PMID:19837035	PMID:19946888	PMID:21123169	PMID:22114352	PMID:22681889	PMID:23345592	PMID:23990465	PMID:24485452
PMID:25002582	PMID:25965346	PMID:35352799

Genomics

Comparative Map Data

Myo18a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	63,152,303 - 63,253,543 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	63,152,103 - 63,253,543 (+)	Ensembl				GRCr8
mRatBN7.2	10	62,654,218 - 62,755,465 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	62,654,281 - 62,755,468 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	67,286,116 - 67,386,748 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	66,791,627 - 66,892,122 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	62,261,757 - 62,362,375 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	64,979,770 - 65,080,535 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	64,979,770 - 65,080,535 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	10	66,545,745 - 66,646,100 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	63,818,690 - 63,906,414 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	61,634,525 - 61,734,518 (+)	NCBI		Celera
Cytogenetic Map	10	q24	NCBI

MYO18A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	29,071,122 - 29,180,398 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	29,071,119 - 29,180,456 (-)	Ensembl			hg38	GRCh38
GRCh37	17	27,398,140 - 27,507,416 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	24,424,654 - 24,531,533 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	17	24,424,664 - 24,426,753	NCBI
Celera	17	24,259,886 - 24,366,927 (-)	NCBI		Celera
Cytogenetic Map	17	q11.2	NCBI
HuRef	17	23,608,764 - 23,715,901 (-)	NCBI		HuRef
CHM1_1	17	27,463,017 - 27,569,879 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	30,013,842 - 30,123,093 (-)	NCBI		T2T-CHM13v2.0

Myo18a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	77,654,066 - 77,756,806 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	77,654,072 - 77,756,806 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	11	77,763,240 - 77,865,988 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	77,763,246 - 77,865,980 (+)	Ensembl			mm10	GRCm38
MGSCv37	11	77,590,767 - 77,679,482 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	11	77,593,460 - 77,682,175 (+)	NCBI		MGSCv36	mm8
Celera	11	85,276,608 - 85,365,361 (+)	NCBI		Celera
Cytogenetic Map	11	B5	NCBI
cM Map	11	46.74	NCBI

Myo18a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955481	4,028,706 - 4,113,878 (+)	Ensembl
ChiLan1.0	NW_004955481	4,020,274 - 4,115,014 (+)	NCBI	ChiLan1.0	ChiLan1.0

MYO18A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	35,247,597 - 35,384,086 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	37,128,726 - 37,265,227 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	27,593,787 - 27,700,801 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	28,116,279 - 28,208,301 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	28,116,279 - 28,208,301 (+)	Ensembl			panPan2	panpan1.1

MYO18A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	43,226,170 - 43,325,026 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	43,227,187 - 43,322,545 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	42,381,105 - 42,479,871 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	44,043,174 - 44,141,965 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	44,043,182 - 44,142,168 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	42,826,664 - 42,925,410 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	43,119,129 - 43,217,629 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	43,197,914 - 43,296,683 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Myo18a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	42,379,220 - 42,473,940 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936538	5,258,401 - 5,344,669 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936538	5,257,165 - 5,351,757 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MYO18A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	22,836,856 - 22,942,366 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666075	7,163,834 - 7,269,590 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Myo18a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624786	1,629,949 - 1,715,031 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624786	1,626,555 - 1,726,204 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Myo18a
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	9	96,460,942 - 96,547,581 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Myo18a
244 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	289
Count of miRNA genes:	166
Interacting mature miRNAs:	191
Transcripts:	ENSRNOT00000043448
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61441	Btemp1	Thermal response to stress QTL 1	4		body temperature trait (VT:0005535)	core body temperature (CMO:0001036)	10	35893451	64140567	Rat
1549846	Scl47	Serum cholesterol level QTL 47	3.6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	10	51071897	96071897	Rat
152025229	Scl83	Serum cholesterol level QTL 83	4.33		blood cholesterol amount (VT:0000180)		10	36211556	69161158	Rat
1578779	Tcas10	Tongue tumor susceptibility QTL 10	3.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	10	31796281	76796281	Rat
152025227	Bw195	Body weight QTL 195	5.73		body mass (VT:0001259)		10	47489017	69161158	Rat
1298069	Bp168	Blood pressure QTL 168	5.5		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	10	27023535	98502431	Rat
2293669	Bmd33	Bone mineral density QTL 33	4.5	0.0001	femur strength trait (VT:0010010)	femoral neck polar moment of inertia (CMO:0001670)	10	27443787	72443787	Rat
152025224	Bw193	Body weight QTL 193	6.47		body mass (VT:0001259)		10	52162433	75582749	Rat
631552	Vetf2	Vascular elastic tissue fragility QTL 2	4.5	0.0002	aorta elastic tissue integrity trait (VT:0010556)	artery internal elastic lamina non-tumorous lesion count (CMO:0001913)	10	35509383	91417879	Rat
631554	Bp133	Blood pressure QTL 133		0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	1250554	64349221	Rat
631557	Bp136	Blood pressure QTL 136		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	56868440	76129113	Rat
61325	Aia5	Adjuvant induced arthritis QTL 5		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
2293679	Bmd30	Bone mineral density QTL 30	3.5	0.0001	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	10	27443787	72443787	Rat
1298078	Stresp5	Stress response QTL 5	2.99	0.00025	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	10	42546145	107713808	Rat
1549831	Bss6	Bone structure and strength QTL 6	4		lumbar vertebra strength trait (VT:0010574)	vertebra ultimate force (CMO:0001678)	10	58073360	103073360	Rat
2298544	Neuinf9	Neuroinflammation QTL 9	4.6		nervous system integrity trait (VT:0010566)	spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)	10	19939207	64939207	Rat
70164	Bw21	Body weight QTL 21	4.36	0.00005	body mass (VT:0001259)	body weight (CMO:0000012)	10	54296336	99451733	Rat
61463	Bp12	Blood pressure QTL 12	6.3	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	41831278	86831278	Rat
1579919	Bp281	Blood pressure QTL 281		0.01	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50464802	95464802	Rat
8694173	Bw149	Body weight QTL 149	4.38	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	10	44939359	89939359	Rat
2300218	Hpcl2	Hepatic cholesterol level QTL 2			liver cholesterol amount (VT:0010498)	liver cholesterol level (CMO:0001597)	10	45529164	96099749	Rat
70171	Cari1	Carrageenan-induced inflammation QTL 1	4.9	0.0005	hypodermis integrity trait (VT:0010550)	inflammatory exudate volume (CMO:0001429)	10	54296227	107713808	Rat
1598852	Anxrr19	Anxiety related response QTL 19	5.07		body movement coordination trait (VT:0005424)	number of rearing movements in an experimental apparatus (CMO:0001752)	10	18668419	63668419	Rat
10450493	Bp382	Blood pressure QTL 382		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50860288	95860288	Rat
724527	Bp148	Blood pressure QTL 148		0.0001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	28950353	73950353	Rat
1358897	Stresp6	Stress response QTL 6	4.17	0.022	blood norepinephrine amount (VT:0005663)	plasma norepinephrine level (CMO:0001010)	10	35893263	64653589	Rat
1331762	Rf40	Renal function QTL 40	3.873		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	10	29800910	64653589	Rat
2300171	Bmd58	Bone mineral density QTL 58	4.9	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	10	27443787	72443787	Rat
61354	Pia10	Pristane induced arthritis QTL 10		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
2301967	Cm73	Cardiac mass QTL 73	4.55		heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	14991535	86964295	Rat
2313103	Bss80	Bone structure and strength QTL 80	2	0.0001	tibia strength trait (VT:1000284)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	10	62556066	107556066	Rat
70188	BpQTLcluster1	Blood pressure QTL cluster 1	4.864		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	1	42823274	87823274	Rat
2313105	Bss79	Bone structure and strength QTL 79	1.8	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	10	62556066	107556066	Rat
9589030	Epfw9	Epididymal fat weight QTL 9	19.24	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	10	44939359	89939359	Rat
2316949	Gluco60	Glucose level QTL 60	3.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	10	14991535	107556066	Rat
2293652	Bmd22	Bone mineral density QTL 22	4.9	0.0001	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	10	27443787	72443787	Rat
70198	BpQTLcluster9	Blood pressure QTL cluster 9	2.94		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	42823274	87823274	Rat
2306970	Anxrr22	Anxiety related response QTL 22	5.95		fear/anxiety-related behavior trait (VT:1000241)	number of periods of voluntary immobility (CMO:0001045)	10	61843496	98710773	Rat
2306787	Ean3	Experimental allergic neuritis QTL 3	3.1		nervous system integrity trait (VT:0010566)	body weight loss (CMO:0001399)	10	54296227	67476781	Rat
724556	Pur2	Proteinuria QTL 2	5.5		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	10	22931373	91127454	Rat
8662860	Vetf10	Vascular elastic tissue fragility QTL 10			artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	10	6660923	73950353	Rat
2306792	Ean4	Experimental allergic neuritis QTL 4	4		nervous system integrity trait (VT:0010566)	IFNG-secreting splenocyte count (CMO:0002122)	10	49495492	94495492	Rat
61387	Bp1	Blood pressure QTL 1	5.1		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	10	52269185	107713808	Rat
1354587	Kidm21	Kidney mass QTL 21	3.3		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	10	15533012	73695498	Rat
634329	Pia15	Pristane induced arthritis QTL 15	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	24662123	73695339	Rat
2298480	Eau7	Experimental allergic uveoretinitis QTL 7		0.0049	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	10	35509383	80509383	Rat
70363	Bp71	Blood pressure QTL 71		0.04	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	61843496	106843496	Rat
61402	Niddm3	Non-insulin dependent diabetes mellitus QTL 3	4.58		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	10	61843633	83061236	Rat
1331791	Cm31	Cardiac mass QTL 31	3.84606		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	10	29800910	91417879	Rat
2313087	Bmd80	Bone mineral density QTL 80	3.2	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	10	20110614	65110614	Rat
631530	Tls3	T-lymphoma susceptibility QTL 3	0	0.0001	thymus integrity trait (VT:0010555)	percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)	10	27587226	96099902	Rat
2289985	Bp305	Blood pressure QTL 305			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	29076978	74076978	Rat
1354608	Cm33	Cardiac mass QTL 33	2.8		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	10	55307972	93608131	Rat
1558643	Cm44	Cardiac mass QTL 44	4.8	0.0000368	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	10	61843496	100198886	Rat
8552805	Bw145	Body weight QTL 145	2.2		body mass (VT:0001259)	change in body weight to body weight ratio (CMO:0002216)	10	43608793	88608793	Rat
631267	Cia20	Collagen induced arthritis QTL 20	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
2293705	Bmd25	Bone mineral density QTL 25	7.1	0.0001	femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	10	27443787	72443787	Rat
1331839	Eae18b	Experimental allergic encephalomyelitis QTL 18b	5.8	0.03	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	10	61746532	68282731	Rat
631269	Cia22	Collagen induced arthritis QTL 22	8.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40535708	107713808	Rat
1576308	Schws1	Schwannoma susceptibility QTL 1		0.0041	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	10	40535708	107713808	Rat
631268	Cia21	Collagen induced arthritis QTL 21	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	14991535	107713808	Rat
7207811	Bmd90	Bone mineral density QTL 90	5.2		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	10	49943710	94943710	Rat
1576311	Pia26	Pristane induced arthritis QTL 26			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	31129113	76129113	Rat
631270	Cia23	Collagen induced arthritis QTL 23	3.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40535708	107713808	Rat
7411614	Foco18	Food consumption QTL 18		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	10	44939359	89939359	Rat
631526	Bp76	Blood pressure QTL 76		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	61843633	67241334	Rat
6893336	Cm75	Cardiac mass QTL 75	0.1	0.87	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	10	61843496	100198886	Rat
631547	Bp87	Blood pressure QTL 87	4.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	47869129	92869129	Rat
61427	Cia16	Collagen induced arthritis QTL 16	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	6864618	96620484	Rat
12880050	Am10	Aortic mass QTL 10		0.016	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	39503487	84503487	Rat
2292436	Bp310	Blood pressure QTL 310			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50604677	95604677	Rat
6893342	Cm78	Cardiac mass QTL 78	0.1	0.88	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	10	35509383	88177745	Rat
634354	Rends3	Renal damage susceptibility QTL 3		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	10	61997479	106997479	Rat
2313055	Bw96	Body weight QTL 96	3.6	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	10	20110614	65110614	Rat
631542	Bp82	Blood pressure QTL 82	6.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	27023535	99451848	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
17	13	77	203	91	90	59	129	59	6	429	243	16	187	102	110	31	32	32

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001172137	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001415683	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086333	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086335	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086337	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086340	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039086344	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269353	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269358	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269359	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269360	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269361	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269363	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269364	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269365	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269366	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269367	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269368	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269369	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269370	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269373	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269374	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269375	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC105827	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000043448 ⟹ ENSRNOP00000050980

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	63,152,337 - 63,253,542 (+)	Ensembl
mRatBN7.2 Ensembl	10	62,654,281 - 62,754,967 (+)	Ensembl
Rnor_6.0 Ensembl	10	64,980,386 - 65,066,612 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000088919 ⟹ ENSRNOP00000070473

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	63,152,380 - 63,253,430 (+)	Ensembl
mRatBN7.2 Ensembl	10	62,654,281 - 62,754,967 (+)	Ensembl
Rnor_6.0 Ensembl	10	64,979,770 - 65,080,535 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095502 ⟹ ENSRNOP00000077922

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	63,152,103 - 63,253,543 (+)	Ensembl
mRatBN7.2 Ensembl	10	62,654,281 - 62,754,967 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000098495 ⟹ ENSRNOP00000080654

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	63,152,337 - 63,253,542 (+)	Ensembl
mRatBN7.2 Ensembl	10	62,654,281 - 62,754,967 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000100376 ⟹ ENSRNOP00000097807

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	63,152,103 - 63,253,543 (+)	Ensembl
mRatBN7.2 Ensembl	10	62,654,281 - 62,754,967 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102240 ⟹ ENSRNOP00000084388

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	63,196,891 - 63,253,542 (+)	Ensembl
mRatBN7.2 Ensembl	10	62,692,016 - 62,755,468 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102845 ⟹ ENSRNOP00000085273

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	62,654,324 - 62,754,967 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109794 ⟹ ENSRNOP00000089053

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	62,692,013 - 62,754,967 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000110549 ⟹ ENSRNOP00000090809

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	63,196,289 - 63,253,542 (+)	Ensembl
mRatBN7.2 Ensembl	10	62,692,019 - 62,755,468 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000113761 ⟹ ENSRNOP00000082563

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	62,692,016 - 62,754,967 (+)	Ensembl

RefSeq Acc Id:

NM_001172137 ⟹ NP_001165608

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,152,364 - 63,253,543 (+)	NCBI
mRatBN7.2	10	62,654,283 - 62,755,465 (+)	NCBI
Rnor_6.0	10	64,979,770 - 65,080,535 (-)	NCBI
Rnor_5.0	10	66,545,745 - 66,646,100 (+)	NCBI
Celera	10	61,634,525 - 61,734,518 (+)	NCBI

Sequence:

show sequence

GCAGTGCTGCGCTCCAGCCGGGACCCGGCCGCGGCCGCTGGATGCCGCTTCTCCGCCCCTGCTG
CCTGCCGGGCGGGCTCCGGCGGCCGCTGCAAGGTGGGGTCCAAAGACTCTGTGTTAAGCACGGA
TAGTTAACTGGGGATACAACCCCTAAAAACAGCACACCCACCATGTTTAACCTCATGAAGAAAG
ACAAGGACAAAGATGGCGGGCGGAAGGAGAAGAAGGAGAAAAAGGAGAAGAAGGAGAGGATGTC
TGCGGCAGAACTGCGGAGCCTGGAAGAGATGAGCATGCGCCGTGGCTTTTTCAACTTGAACCGG
TCCTCCAAGCGGGAATCCAAGACGCGCCTGGAAATCTCCAACCCCATCCCTATCAAGGTGGCCA
GTGGCTCTGACCTGCACCTAACCGACATTGACTCTGACAGCAATAGGGGTAGCATCATCCTGGA
TTCAGGCCACCTAAGCACAGCCAGCTCCAGTGATGACCTCAAGGGTGAAGAAGGCAGCTTCCGG
GGTTCTGTGCTGCAGCGGGCAGCTAAGTTCGGTTCACTAGCCAAGCAGAACTCTCAGATGATTG
TCAAACGTTTTTCCTTTTCTCAACGGAGCCGGGATGAGAGTGCCTCAGAGACCTCAACCCCCTC
AGAGCACTCTGCAGCCCCATCACCTCAGGTAGAGGTGAGGACGCTTGAGGGACAGCTAATGCAG
CACTCTGGGCTAGGCATCCCTCGACCAGGACCCAGGTCTCGAGTCCCTGAGCTGGTGACTAAAA
GATTCCCAGCTGACTTACGTCTCCCGGCTCTGGTGCCCCCACCACCTCCTGCTCTCCGGGAGCT
GGAGTTACAACGACGACCCACAGGAGACTTTGGCTTCTCACTGCGGCGCACAACCATGCTGGAC
CGGGCCCCTGAGGGTCAGGCCTATCGACGTGTGGTTCACTTTGCTGAGCCAGGGGCAGGCACCA
AGGACCTGGCCTTGGGGCTGGTGCCAGGAGACCGACTGGTGGAGATTAATGGACAGAATGTGGA
GAATAAGTCCAGGGATGAAATTGTGGAGATGATCCGGCAGTCTGGGGACAGTGTGCGGCTCAAG
GTACAGCCCATCCCAGAGCTTAGCGAGCTGAGCCGGAGCTGGCTTCGGACTGGCGAGGGACACC
GCAGGGAGCCGACTGATGCCAAGACAGAAGAGCAGATTGCCGCTGAAGAGGCCTGGTATGAGAC
GGAGAAGGTGTGGCTGGTCCATAGAGATGGATTCTCCTTAGCCAGCCAGCTCAAGTCGGAGGAG
CTCAGCCTACCCGAGGGGAAGGTGCGCGTGAAGCTAGACCACGATGGAGCCATCCTGGATGTGG
ATGAAGATGACGTAGAGAAGGCTAACGCTCCCTCATGTGACCGACTAGAAGATCTGGCCTCCTT
GGTGTACCTCAACGAGTCTAGCGTCCTGCATACACTGCGCCAGCGCTATGGGGCCAGCCTGCTA
CACACCTATGCCGGCCCTAGCCTGCTTGTCCTTAGCCCCCGAGGGGCTCCTGCTGTGTATTCAG
AGAAGGTGATGCACATGTTCAAGGGGTGTCGGCGGGAGGACATGGCACCCCACATCTATGCTGT
AGCCCAGACTGCATATAGGGCCATGTTGATGAGTCGTCAGGACCAGTCCATCGTCCTTCTGGGC
AGTAGTGGCAGTGGCAAGACCACCAGCTCTCAGCATCTGGTGCAGTATCTGGCTACCATTGCCG
GCACCAGCGGGAACAAGGTGTTCTCAGTGGAGAAGTGGCAGGCTCTGGCCACCCTCCTGGAAGC
CTTTGGGAACAGCCCTACCATCATGAACGGCAGTGCCACCCGCTTCTCCCAGATCCTCTCCCTG
GACTTTGACCAAGCTGGCCAGGTGGCTTCAGCCTCCGTCCAGACCATGCTCCTGGAGAAGCTGC
GTGTGGCCCGACGCCCAGCCAGCGAGGCCACTTTCAATGTCTTCTACTACTTGCTGGCCTGTGG
GGACAGCACCCTCAGGACAGAGCTCCACCTGAACCACTTGGCAGAGAACAATGTGTTTGGAATT
GTGCCATTGTCCAAGCCTGAGGAGAAGCAGAGGGCTGCTCAGCAGTTCAGTAAGCTACAGACGG
CCATGAAGGTGCTGGCCATCTCCCCTGAGGAACAGAAGGCCTGCTGGCTCATCCTGGCTTCCAT
CTACCACTTGGGGGCTGCTGGAGCTACCAAAGAAGCTGCTGAAGGTGGACGTAAGCAATTTGCC
CGTCATGAATGGGCCCAGAAGGCCGCATACCTGCTAGGCTGCAGCTTGGAAGAGCTGTCCTCAG
CGATCTTCAAGCACCAGCTCAAAGGCGGCACCCTGCAACGGTCTACCTCCTTCCGTCAGGGCCC
TGAGGAGAGCGGCCTGGGAGAGGGTACAGGCACCAAGCTGAGTGCTCTGGAGTGCTTAGAGGGT
ATGGCGTCTGGCCTCTACAGCGAGCTCTTTACTCTCCTCATCTCCCTGGTAAACAGGGCTCTCA
AGTCCAGCCAGCACTCACTGTGTTCCATGATGATTGTGGATACACCAGGCTTCCAGAACCCTGA
ATGGGGTGGCTCAGCCCGTGGCGCCTCCTTCGAGGAGCTGTGCCACAACTATGCCCAGGACAGG
TTGCAGAAGCTGTTCCATGAGCGCACCTTCCTCCAGGAGTTGGAAAGGTACAAGGAGGACAACA
TCGAACTGGCGTTTGATGACTTGGAGCCAGTCACAGATGACTCAGTGGCTGCTGTGGACCAGGC
CTCCCACCAGTCCCTGGTTCGCTCACTGGCCCATGCCGATGAGGCAAGAGGACTACTGTGGCTC
CTAGAAGAGGAGGCTCTGGTGCCAGGTGCGACTGAGGATACCCTCCTGGACCGTCTTTTCTCCT
ATTATGGCCCCCAGGAAGGTGACAAAAAAGGTCAGAGTCCTCTTCTGCGCAGTAGCAAACCACG
GCACTTTCTCCTGGGCCACAGCCATGGTACCAACTGGGTGGAGTACAATGTGACCGGCTGGCTG
AACTACACCAAGCAGAACCCAGCCACCCAGAATGCACCCCGGCTCCTGCAGGACTCCCAGAAAA
AGATCATCAGCAACCTGTTTCTGGGCCGGGCAGGCACTGCCACAGTGCTCTCGGGCTCAATTGC
AGGCCTGGAAGGTGGCTCCCAGCTGGCCTTGCGCCGGGCAACTAGCATGAGGAAAACCTTTACC
ACTGGCATGGCAGCTGTCAAGAAGAAGTCACTGTGCATACAGATCAAGCTGCAAGTGGATGCCC
TCATCGATACCATCAAGAGGTCCAAGATGCATTTCGTGCACTGCTTCCTTCCTGTGGCCGAGGG
CTGGCCTGGGGAGCCCCGATCTGCTTCTTCTCGCCGAGTTAGTAGCAGCAGTGAGCTGGACCTG
CCTCCGGGAGACCCCTGCGAGGCTGGGCTGCTACAACTGGATGTGTCCCTGCTCCGTGCCCAGC
TTCGGGGATCCCGCCTGCTTGATGCAATACGCATGTACCGCCAAGGTTACCCAGACCACATGGT
GTTTTCTGAGTTCCGTAGGCGCTTTGATGTCCTGGCCCCACACCTGACCAAGAAACATGGGCGT
AACTACATCGTGGTGGATGAGAAGCGGGCTGTGGAGGAGCTGCTGGAGTCCCTAGACCTGGAAA
AGAGCAGCTGCTGCATGGGCCTGAGTCGGGTATTCTTCCGGGCAGGCACGTTGGCACGGCTGGA
AGAGCAACGAGACGAGGAAACCAGCAGACACCTGACCCTGTTCCAGGCAGCCTGCAGGGGCTAC
CTTGCCCGCCAGCACTTCAAGAAGAGAAAGATCCAGGACCTGGCCATTCGCTGTGTGCAGAAGA
ACATCAAGAAGAACAAGGGGGTGAAGGACTGGCCCTGGTGGAAGCTCTTCACCACTGTGCGGCC
CCTCATCCAAGTTCAGCTGTCTGAGGAGCAGATCCGAAACAAAGACGAGGAGATCCAGCAGCTG
CGAAACAAGCTTGAGAAGGTGGAGAAAGAGAGGAATGAGCTTCGGCTCAACAGTGACCGGCTGG
AGACCCGGATCTCAGAGCTGACATCGGAGCTGACTGATGAACGCAACACAGGAGAGTCCGCCTC
CCAGCTGCTGGACGCGGAGACAGCCGAGAGGCTCCGGACCGAGAAGGAAATGAAAGAGCTACAG
ACCCAGTACGATGCCCTGAAGAAGCAGATGGAGGCGATGGACATGGAAGTGATGGAGGCCCGGC
TCATTCGGGCAGCCGAGATCAACGGGGAGGTGGATGACGATGACGCAGGGGGAGAGTGGCGGCT
GAAGTACGAGCGAGCTGTTCGGGAGGTGGACTTCACCAAGAAGCGGCTTCAGCAGGAGCTGGAA
GACAAGATGGAGGTGGAGCAGCAGAACAGGAGGCAGCTGGAGAGGCGGCTTGGGGACCTGCAAG
CAGATAGTGACGAGAGTCAGCGGGCACTGCAGCAGCTCAAGAAAAAGTGCCAACGGCTCACAGC
TGAGCTGCAGGACACCAAGCTGCACCTGGAGGGCCAGCAGGTCCGAAACCATGAGCTGGAAAAG
AAGCAGAGGAGGTTTGACAGTGAGCTCTCCCAGGCACATGAGGAGACCCAGCGGGAGAAGCTGC
AGAGGGAGAAGCTTCAGCGGGAGAAGGACATGCTCCTAGCTGAGGCCTTCAGCCTGAAGCAGCA
GATGGAGGAAAAAGACTTGGATATCGCAGGGTTTACCCAGAAGGTTGTTTCCTTGGAGGCCGAG
CTTCAGGACATTTCTTCTCAAGAGTCTAAGGATGAGGCTTCTCTGGCCAAGGTCAAGAAGCAGC
TCCGGGACTTGGAGGCCAAGGTCAAGGATCAGGAAGAGGAGCTGGATGAACAGGCTGGGAGCAT
ACAGATGCTGGAGCAGGCCAAGCTGCGTCTGGAGATGGAGATGGAGCGGATGAGACAGACCCAT
TCCAAGGAGATGGAGAGCCGGGATGAGGAGGTGGAAGAGGCCCGGCAGTCATGTCAGAAGAAGC
TAAGGCAGATGGAAGTTCAGCTGGAGGAGGAGTATGAAGACAAGCAGAAGGCGCTGCGGGAGAA
ACGGGAGCTGGAGAGCAAGCTCTCCACGCTCAGTGACCAGGTGAACCAGCGGGACTTTGAATCA
GAGAAGCGGCTACGGAAAGACCTGAAGCGCACCAAAGCGCTGCTGGCAGATGCTCAGATCATGC
TGGACCACTTAAAGAACAATGCCCCCAGCAAGAGGGAGATTGCCCAGCTGAAGAACCAGCTGGA
AGAGTCGGAATTCACCTGTGCAGCAGCTGTGAAGGCACGGAAAGCAATGGAGGTGGAGATGGAA
GACCTGCACCTGCAGATCGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGAGCAACTGAGTC
GCCTTCAGCGTGAGAAAAATGAGATTCAGAACCGGCTGGAAGAGGACCAGGAGGACATGAATGA
GCTGATGAAGAAGCACAAGGCGGCCGTGGCTCAGGCCTCCCGGGACATGGCACAGATGAATGAT
CTCCAAGCTCAGCTCGAAGAGTCCAACAAGGAGAAGCAGGAGCTACAGGAGAAGCTACAAGCTC
TGCAGAGCCAGGTGGAGTTCCTAGAGCAGTCCATGGTGGACAAGTCCCTTGTCAGCAGGCAGGA
AGCGAAGATCAGGGAGCTGGAGACACGCCTGGAGTTCGAAAAGACCCAAGTGAAACGTCTGGAG
AGCATGGCCAGTCGGCTCAAAGAAAACATGGAGAAGCTGACTGAGGAACGGGACCAGCGCGCTG
CAGCTGAGAACCGTGAGAAGGAGCAGAACAAGAGGCTCCAGCGACAGCTCCGTGACACCAAGGA
GGAGATGAGCGAGCTTGCCAGGAAGGAAGCTGAGGCTAGTCGCAAGAAGCACGAACTGGAGATG
GACTTGGAGAGTCTGGAAGCCGCTAACCAAAGCCTGCAAGCTGACCTAAAGCTGGCGTTCAAAC
GCATTGGGGACTTGCAAGCCGCCATTGAGGATGAGATGGAGAGTGATGAGAATGAGGACCTTAT
CAACAGTTTGCAGGATATGGTGACAAAATATCAGAAAAGAAAGAATAAACTTGAGGGCGACTCA
GACGTGGACTCAGAGCTGGAGGACCGGGTCGACGGTGTCAAGTCCTGGTTGTCAAAGAACAAGG
GACCCTCTAAGGCACCTTCCGACGATGGCAGCTTAAAGAGTTCCAGCCCAACCAGCCACTGGAA
GTCCCTCGCCCCCGACCTGTCGGATGATGAGCACGATCCTGTGGACAGCATCTCCAGACCCCGG
TTCTCCCACAACTATCTGAGTGACAGTGACACAGAGGCCAAGCTGACAGAGACCAACGCATAGC
CTTGGAAGTGGCTCAGCCCTCCCACCCCACAGCCTCTCCCAGGAAATAGAGGGGTACCACTGCC
CCCACTTGACAGCCGATCTGCATGGAAAACACCTCGGCTTTCTGCCGGGAACTTCCCAGGCTGT
GGGTGTCTGACGGCTCCACGTGGAAGAGGTGGGGAAGCAGAGTCTGTCAGGAGAGTCTCCACTC
TTGCCTCAGATGCCGTGCTCTTAGCTCCCATCCAGGGCCACTAAGGACCATGTTTGGTGGCCTG
GCACTTCATGGAGCCCGTAGTGGACCTCCATCTCAGCCTCCTGCTCAGGGATGGTGGATAGGTT
ACCTGCTGGACCGCTCCAAGTGGCTGGGCCCATGGGAAAGAGTCAGGAGGGAGCTGCAGTGCCT
CCCCTCTGCTGGGGCCAGGGCTTTCTCTTCTCAGTGCCTGCTGTCTTTTTACTGTTTAATTTAA
ATACCCAAACCTCCATGCAGCTGCATCCCTGAGAGTAGGAGGGGCCATGGTTGCAGCTGGGCCC
TGTGGGATGCCTTGGGAATCTCCTCTCCATCTCCGCTTCTCCAGAGGCTCTTTCTCGTGAAGCC
TGCTGCCAGCGGACACTGGTGAGCAGAGCTGGGGCCCTG

hide sequence

RefSeq Acc Id:

NM_001415683 ⟹ NP_001402612

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,152,364 - 63,253,543 (+)	NCBI
mRatBN7.2	10	62,654,283 - 62,755,465 (+)	NCBI

RefSeq Acc Id:

XM_039086333 ⟹ XP_038942261

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,152,303 - 63,248,234 (+)	NCBI
mRatBN7.2	10	62,654,218 - 62,754,346 (+)	NCBI

RefSeq Acc Id:

XM_039086335 ⟹ XP_038942263

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,152,303 - 63,248,234 (+)	NCBI
mRatBN7.2	10	62,654,218 - 62,754,346 (+)	NCBI

RefSeq Acc Id:

XM_039086337 ⟹ XP_038942265

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,152,303 - 63,248,234 (+)	NCBI
mRatBN7.2	10	62,654,218 - 62,754,346 (+)	NCBI

RefSeq Acc Id:

XM_039086340 ⟹ XP_038942268

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,190,114 - 63,248,234 (+)	NCBI
mRatBN7.2	10	62,692,056 - 62,754,346 (+)	NCBI

RefSeq Acc Id:

XM_039086344 ⟹ XP_038942272

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,190,086 - 63,248,234 (+)	NCBI
mRatBN7.2	10	62,692,006 - 62,754,346 (+)	NCBI

RefSeq Acc Id:

XM_063269353 ⟹ XP_063125423

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,204,441 - 63,248,234 (+)	NCBI

RefSeq Acc Id:

XM_063269354 ⟹ XP_063125424

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,204,441 - 63,248,234 (+)	NCBI

RefSeq Acc Id:

XM_063269355 ⟹ XP_063125425

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,204,442 - 63,248,234 (+)	NCBI

RefSeq Acc Id:

XM_063269357 ⟹ XP_063125427

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,204,443 - 63,248,234 (+)	NCBI

RefSeq Acc Id:

XM_063269358 ⟹ XP_063125428

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,204,442 - 63,248,234 (+)	NCBI

RefSeq Acc Id:

XM_063269359 ⟹ XP_063125429

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,155,696 - 63,248,234 (+)	NCBI

RefSeq Acc Id:

XM_063269360 ⟹ XP_063125430

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,196,357 - 63,248,234 (+)	NCBI

RefSeq Acc Id:

XM_063269361 ⟹ XP_063125431

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,152,303 - 63,248,234 (+)	NCBI

RefSeq Acc Id:

XM_063269362 ⟹ XP_063125432

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,152,303 - 63,248,234 (+)	NCBI

RefSeq Acc Id:

XM_063269363 ⟹ XP_063125433

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,152,303 - 63,248,234 (+)	NCBI

RefSeq Acc Id:

XM_063269364 ⟹ XP_063125434

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,204,457 - 63,253,542 (+)	NCBI

RefSeq Acc Id:

XM_063269365 ⟹ XP_063125435

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,190,113 - 63,248,234 (+)	NCBI

RefSeq Acc Id:

XM_063269366 ⟹ XP_063125436

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,204,458 - 63,253,542 (+)	NCBI

RefSeq Acc Id:

XM_063269367 ⟹ XP_063125437

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,204,458 - 63,253,542 (+)	NCBI

RefSeq Acc Id:

XM_063269368 ⟹ XP_063125438

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,204,458 - 63,253,542 (+)	NCBI

RefSeq Acc Id:

XM_063269369 ⟹ XP_063125439

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,204,458 - 63,253,542 (+)	NCBI

RefSeq Acc Id:

XM_063269370 ⟹ XP_063125440

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,152,303 - 63,253,542 (+)	NCBI

RefSeq Acc Id:

XM_063269371 ⟹ XP_063125441

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,152,303 - 63,253,542 (+)	NCBI

RefSeq Acc Id:

XM_063269372 ⟹ XP_063125442

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,152,303 - 63,253,542 (+)	NCBI

RefSeq Acc Id:

XM_063269373 ⟹ XP_063125443

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,152,303 - 63,253,542 (+)	NCBI

RefSeq Acc Id:

XM_063269374 ⟹ XP_063125444

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,152,303 - 63,253,542 (+)	NCBI

RefSeq Acc Id:

XM_063269375 ⟹ XP_063125445

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,152,303 - 63,253,542 (+)	NCBI

RefSeq Acc Id:

XM_063269376 ⟹ XP_063125446

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,152,303 - 63,253,542 (+)	NCBI

RefSeq Acc Id:

XM_063269377 ⟹ XP_063125447

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	63,225,125 - 63,248,234 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001165608	(Get FASTA)	NCBI Sequence Viewer
	NP_001402612	(Get FASTA)	NCBI Sequence Viewer
	XP_038942261	(Get FASTA)	NCBI Sequence Viewer
	XP_038942263	(Get FASTA)	NCBI Sequence Viewer
	XP_038942265	(Get FASTA)	NCBI Sequence Viewer
	XP_038942268	(Get FASTA)	NCBI Sequence Viewer
	XP_038942272	(Get FASTA)	NCBI Sequence Viewer
	XP_063125423	(Get FASTA)	NCBI Sequence Viewer
	XP_063125424	(Get FASTA)	NCBI Sequence Viewer
	XP_063125425	(Get FASTA)	NCBI Sequence Viewer
	XP_063125427	(Get FASTA)	NCBI Sequence Viewer
	XP_063125428	(Get FASTA)	NCBI Sequence Viewer
	XP_063125429	(Get FASTA)	NCBI Sequence Viewer
	XP_063125430	(Get FASTA)	NCBI Sequence Viewer
	XP_063125431	(Get FASTA)	NCBI Sequence Viewer
	XP_063125432	(Get FASTA)	NCBI Sequence Viewer
	XP_063125433	(Get FASTA)	NCBI Sequence Viewer
	XP_063125434	(Get FASTA)	NCBI Sequence Viewer
	XP_063125435	(Get FASTA)	NCBI Sequence Viewer
	XP_063125436	(Get FASTA)	NCBI Sequence Viewer
	XP_063125437	(Get FASTA)	NCBI Sequence Viewer
	XP_063125438	(Get FASTA)	NCBI Sequence Viewer
	XP_063125439	(Get FASTA)	NCBI Sequence Viewer
	XP_063125440	(Get FASTA)	NCBI Sequence Viewer
	XP_063125441	(Get FASTA)	NCBI Sequence Viewer
	XP_063125442	(Get FASTA)	NCBI Sequence Viewer
	XP_063125443	(Get FASTA)	NCBI Sequence Viewer
	XP_063125444	(Get FASTA)	NCBI Sequence Viewer
	XP_063125445	(Get FASTA)	NCBI Sequence Viewer
	XP_063125446	(Get FASTA)	NCBI Sequence Viewer
	XP_063125447	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI05828	(Get FASTA)	NCBI Sequence Viewer
	D3ZFD0	(Get FASTA)	NCBI Sequence Viewer
	EDM05296	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000070473
	ENSRNOP00000077922
	ENSRNOP00000080654
	ENSRNOP00000084388
	ENSRNOP00000097807

RefSeq Acc Id:	NP_001165608 ⟸ NM_001172137
- Peptide Label:	isoform 1
- UniProtKB:	A6HGZ1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFNLMKKDKDKDGGRKEKKEKKEKKERMSAAELRSLEEMSMRRGFFNLNRSSKRESKTRLEISN PIPIKVASGSDLHLTDIDSDSNRGSIILDSGHLSTASSSDDLKGEEGSFRGSVLQRAAKFGSLA KQNSQMIVKRFSFSQRSRDESASETSTPSEHSAAPSPQVEVRTLEGQLMQHSGLGIPRPGPRSR VPELVTKRFPADLRLPALVPPPPPALRELELQRRPTGDFGFSLRRTTMLDRAPEGQAYRRVVHF AEPGAGTKDLALGLVPGDRLVEINGQNVENKSRDEIVEMIRQSGDSVRLKVQPIPELSELSRSW LRTGEGHRREPTDAKTEEQIAAEEAWYETEKVWLVHRDGFSLASQLKSEELSLPEGKVRVKLDH DGAILDVDEDDVEKANAPSCDRLEDLASLVYLNESSVLHTLRQRYGASLLHTYAGPSLLVLSPR GAPAVYSEKVMHMFKGCRREDMAPHIYAVAQTAYRAMLMSRQDQSIVLLGSSGSGKTTSSQHLV QYLATIAGTSGNKVFSVEKWQALATLLEAFGNSPTIMNGSATRFSQILSLDFDQAGQVASASVQ TMLLEKLRVARRPASEATFNVFYYLLACGDSTLRTELHLNHLAENNVFGIVPLSKPEEKQRAAQ QFSKLQTAMKVLAISPEEQKACWLILASIYHLGAAGATKEAAEGGRKQFARHEWAQKAAYLLGC SLEELSSAIFKHQLKGGTLQRSTSFRQGPEESGLGEGTGTKLSALECLEGMASGLYSELFTLLI SLVNRALKSSQHSLCSMMIVDTPGFQNPEWGGSARGASFEELCHNYAQDRLQKLFHERTFLQEL ERYKEDNIELAFDDLEPVTDDSVAAVDQASHQSLVRSLAHADEARGLLWLLEEEALVPGATEDT LLDRLFSYYGPQEGDKKGQSPLLRSSKPRHFLLGHSHGTNWVEYNVTGWLNYTKQNPATQNAPR LLQDSQKKIISNLFLGRAGTATVLSGSIAGLEGGSQLALRRATSMRKTFTTGMAAVKKKSLCIQ IKLQVDALIDTIKRSKMHFVHCFLPVAEGWPGEPRSASSRRVSSSSELDLPPGDPCEAGLLQLD VSLLRAQLRGSRLLDAIRMYRQGYPDHMVFSEFRRRFDVLAPHLTKKHGRNYIVVDEKRAVEEL LESLDLEKSSCCMGLSRVFFRAGTLARLEEQRDEETSRHLTLFQAACRGYLARQHFKKRKIQDL AIRCVQKNIKKNKGVKDWPWWKLFTTVRPLIQVQLSEEQIRNKDEEIQQLRNKLEKVEKERNEL RLNSDRLETRISELTSELTDERNTGESASQLLDAETAERLRTEKEMKELQTQYDALKKQMEAMD MEVMEARLIRAAEINGEVDDDDAGGEWRLKYERAVREVDFTKKRLQQELEDKMEVEQQNRRQLE RRLGDLQADSDESQRALQQLKKKCQRLTAELQDTKLHLEGQQVRNHELEKKQRRFDSELSQAHE ETQREKLQREKLQREKDMLLAEAFSLKQQMEEKDLDIAGFTQKVVSLEAELQDISSQESKDEAS LAKVKKQLRDLEAKVKDQEEELDEQAGSIQMLEQAKLRLEMEMERMRQTHSKEMESRDEEVEEA RQSCQKKLRQMEVQLEEEYEDKQKALREKRELESKLSTLSDQVNQRDFESEKRLRKDLKRTKAL LADAQIMLDHLKNNAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEMEDLHLQIDDIAKAKT ALEEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDMAQMNDLQAQLEESNKEKQE LQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFEKTQVKRLESMASRLKENMEKLT EERDQRAAAENREKEQNKRLQRQLRDTKEEMSELARKEAEASRKKHELEMDLESLEAANQSLQA DLKLAFKRIGDLQAAIEDEMESDENEDLINSLQDMVTKYQKRKNKLEGDSDVDSELEDRVDGVK SWLSKNKGPSKAPSDDGSLKSSSPTSHWKSLAPDLSDDEHDPVDSISRPRFSHNYLSDSDTEAK LTETNA hide sequence

Ensembl Acc Id:

ENSRNOP00000050980 ⟸ ENSRNOT00000043448

Ensembl Acc Id:

ENSRNOP00000070473 ⟸ ENSRNOT00000088919

RefSeq Acc Id:	XP_038942261 ⟸ XM_039086333
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I5Y6H7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942263 ⟸ XM_039086335
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I5Y6H7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942265 ⟸ XM_039086337
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I5Y6H7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942272 ⟸ XM_039086344
- Peptide Label:	isoform X15
- UniProtKB:	A0A8I6AAE3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038942268 ⟸ XM_039086340
- Peptide Label:	isoform X14
- UniProtKB:	A0A8I6AAE3 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000085273 ⟸ ENSRNOT00000102845

Ensembl Acc Id:

ENSRNOP00000082563 ⟸ ENSRNOT00000113761

Ensembl Acc Id:

ENSRNOP00000080654 ⟸ ENSRNOT00000098495

Ensembl Acc Id:

ENSRNOP00000089053 ⟸ ENSRNOT00000109794

Ensembl Acc Id:

ENSRNOP00000077922 ⟸ ENSRNOT00000095502

Ensembl Acc Id:

ENSRNOP00000090809 ⟸ ENSRNOT00000110549

Ensembl Acc Id:

ENSRNOP00000097807 ⟸ ENSRNOT00000100376

Ensembl Acc Id:

ENSRNOP00000084388 ⟸ ENSRNOT00000102240

RefSeq Acc Id:	NP_001402612 ⟸ NM_001415683
- Peptide Label:	isoform 2
- UniProtKB:	A6HGZ1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125440 ⟸ XM_063269370
- Peptide Label:	isoform X21
- UniProtKB:	A0A8I6A2X3 (UniProtKB/TrEMBL), A6HGZ1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125441 ⟸ XM_063269371
- Peptide Label:	isoform X22
- UniProtKB:	A0A8I5Y6H7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125443 ⟸ XM_063269373
- Peptide Label:	isoform X24
- UniProtKB:	A6HGZ1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125444 ⟸ XM_063269374
- Peptide Label:	isoform X25
- UniProtKB:	A6HGZ1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125446 ⟸ XM_063269376
- Peptide Label:	isoform X27
- UniProtKB:	A6HGZ1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125442 ⟸ XM_063269372
- Peptide Label:	isoform X23
- UniProtKB:	A0A0G2JY08 (UniProtKB/TrEMBL), A6HGZ1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125445 ⟸ XM_063269375
- Peptide Label:	isoform X26
- UniProtKB:	A0A8I6ATN3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125431 ⟸ XM_063269361
- Peptide Label:	isoform X10
- UniProtKB:	A6HGZ1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125432 ⟸ XM_063269362
- Peptide Label:	isoform X11
- UniProtKB:	A0A8I6ATN3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125433 ⟸ XM_063269363
- Peptide Label:	isoform X12
- UniProtKB:	A0A8I6ATN3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125429 ⟸ XM_063269359
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I5Y6H7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125435 ⟸ XM_063269365
- Peptide Label:	isoform X16
- UniProtKB:	A0A8I6AAE3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125430 ⟸ XM_063269360
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6A163 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125423 ⟸ XM_063269353
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AAE3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125424 ⟸ XM_063269354
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AAE3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125428 ⟸ XM_063269358
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6AAE3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125425 ⟸ XM_063269355
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AAE3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125427 ⟸ XM_063269357
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6AAE3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125434 ⟸ XM_063269364
- Peptide Label:	isoform X13
- UniProtKB:	A0A8I6A9C6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125436 ⟸ XM_063269366
- Peptide Label:	isoform X17
- UniProtKB:	A0A8I6A9C6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125437 ⟸ XM_063269367
- Peptide Label:	isoform X18
- UniProtKB:	A0A8I6A9C6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125438 ⟸ XM_063269368
- Peptide Label:	isoform X19
- UniProtKB:	A0A8I6A9C6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125439 ⟸ XM_063269369
- Peptide Label:	isoform X20
- UniProtKB:	A0A8I6A9C6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063125447 ⟸ XM_063269377
- Peptide Label:	isoform X28

Protein Domains

IQ Myosin motor Myosin N-terminal SH3-like PDZ

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZFD0-F1-model_v2	AlphaFold	D3ZFD0	1-2044	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13697460

Promoter ID:

EPDNEW_R7985

Type:

initiation region

Name:

Myo18a_1

Description:

myosin XVIIIa

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	10	65,080,533 - 65,080,593	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1562698	AgrOrtholog
BioCyc Gene	G2FUF-24114	BioCyc
Ensembl Genes	ENSRNOG00000033101	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000088919	ENTREZGENE
	ENSRNOT00000095502	ENTREZGENE
	ENSRNOT00000098495	ENTREZGENE
	ENSRNOT00000100376	ENTREZGENE
	ENSRNOT00000102240	ENTREZGENE
Gene3D-CATH	1.10.10.820	UniProtKB/Swiss-Prot
	1.20.5.340	UniProtKB/Swiss-Prot
	1.20.58.530	UniProtKB/Swiss-Prot
	2.30.42.10	UniProtKB/Swiss-Prot
	3.30.70.1590	UniProtKB/Swiss-Prot
	3.40.850.10	UniProtKB/Swiss-Prot
	Myosin VI head, motor domain, U50 subdomain	UniProtKB/Swiss-Prot
	Myosin, subunit A	UniProtKB/Swiss-Prot
	Vasodilator-stimulated phosphoprotein	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7381645	IMAGE-MGC_LOAD
InterPro	IQ_motif_EF-hand-BS	UniProtKB/Swiss-Prot
	Kinesin_motor_dom_sf	UniProtKB/Swiss-Prot
	Myosin_head_motor_dom	UniProtKB/Swiss-Prot
	Myosin_N	UniProtKB/Swiss-Prot
	Myosin_tail	UniProtKB/Swiss-Prot
	MYSc_Myo18	UniProtKB/Swiss-Prot
	P-loop_NTPase	UniProtKB/Swiss-Prot
	PDZ	UniProtKB/Swiss-Prot
	PDZ_sf	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:125190	IMAGE-MGC_LOAD
NCBI Gene	360570	ENTREZGENE
PANTHER	MYOSIN HEAVY CHAIN, NON-MUSCLE	UniProtKB/Swiss-Prot
	PTHR45615:SF13	UniProtKB/Swiss-Prot
Pfam	Myosin_head	UniProtKB/Swiss-Prot
	Myosin_tail_1	UniProtKB/Swiss-Prot
	PDZ	UniProtKB/Swiss-Prot
	SH3_Myosin-XVIIIa	UniProtKB/Swiss-Prot
PhenoGen	Myo18a	PhenoGen
PRINTS	MYOSINHEAVY	UniProtKB/Swiss-Prot
PROSITE	MYOSIN_MOTOR	UniProtKB/Swiss-Prot
	PDZ	UniProtKB/Swiss-Prot
	PS50096	UniProtKB/Swiss-Prot
	SH3_LIKE	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000033101	RatGTEx
SMART	MYSc	UniProtKB/Swiss-Prot
	PDZ	UniProtKB/Swiss-Prot
	SM00015	UniProtKB/Swiss-Prot
Superfamily-SCOP	Myosin rod fragments	UniProtKB/Swiss-Prot
	SSF50156	UniProtKB/Swiss-Prot
	SSF52540	UniProtKB/Swiss-Prot
UniProt	A0A0G2JY08	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5Y6H7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZQS0_RAT	UniProtKB/TrEMBL
	A0A8I6A163	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A2X3	ENTREZGENE
	A0A8I6A9C6	ENTREZGENE
	A0A8I6AAE3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ATN3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2UMC0_RAT	UniProtKB/TrEMBL
	A6HGZ1	ENTREZGENE, UniProtKB/TrEMBL
	D3ZFD0	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Myo18a	myosin XVIIIa	LOC103693393	basic salivary proline-rich protein 2-like	Data merged from RGD:9312095	737654	PROVISIONAL
2014-08-25	LOC103693393	basic salivary proline-rich protein 2-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2010-12-08	Myo18a	myosin XVIIIa	LOC360570	similar to myosin XVIIIa	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-02-09	LOC360570	similar to myosin XVIIIa			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar