Gene: Izumo2 (IZUMO family member 2) Rattus norvegicus
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Symbol:
Izumo2
Name:
IZUMO family member 2
RGD ID:
1562619
Description:
Orthologous to human IZUMO2 (IZUMO family member 2); INTERACTS WITH bisphenol A; lidocaine; trichloroethene.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
hypothetical protein LOC687948; hypothetical protein LOC690851; izumo sperm-egg fusion protein 2; izumo sperm-egg fusion protein 2-like; LOC100911976; LOC499147; LOC690851; RGD1562619; similar to SCRL protein variant 1
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 1 104,332,949 - 104,345,584 (+) NCBI GRCr8 GRCr8 GRCr8 GRCr8 Ensembl 1 104,332,782 - 104,345,581 (+) Ensembl GRCr8 mRatBN7.2 1 95,196,459 - 95,209,131 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 1 95,196,459 - 95,209,092 (+) Ensembl mRatBN7.2 Rnor_6.0 1 100,708,687 - 100,721,328 (+) NCBI Rnor_6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 1 100,708,693 - 100,721,251 (+) Ensembl rn6 Rnor6.0 Rnor_6.0 Ensembl 1 99,447,561 - 99,460,119 (+) Ensembl rn6 Rnor6.0 Rnor_5.0 1 101,774,672 - 101,787,293 (+) NCBI Rnor_5.0 Rnor_5.0 rn5 RGSC_v3.4 1 95,184,066 - 95,196,687 (+) NCBI RGSC_v3.4 RGSC_v3.4 rn4 Celera 1 89,458,427 - 89,471,068 (+) NCBI Celera Cytogenetic Map 1 q22 NCBI
JBrowse:
References
Genomics
Comparative Map Data
Izumo2 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 1 104,332,949 - 104,345,584 (+) NCBI GRCr8 GRCr8 GRCr8 GRCr8 Ensembl 1 104,332,782 - 104,345,581 (+) Ensembl GRCr8 mRatBN7.2 1 95,196,459 - 95,209,131 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 1 95,196,459 - 95,209,092 (+) Ensembl mRatBN7.2 Rnor_6.0 1 100,708,687 - 100,721,328 (+) NCBI Rnor_6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 1 100,708,693 - 100,721,251 (+) Ensembl rn6 Rnor6.0 Rnor_6.0 Ensembl 1 99,447,561 - 99,460,119 (+) Ensembl rn6 Rnor6.0 Rnor_5.0 1 101,774,672 - 101,787,293 (+) NCBI Rnor_5.0 Rnor_5.0 rn5 RGSC_v3.4 1 95,184,066 - 95,196,687 (+) NCBI RGSC_v3.4 RGSC_v3.4 rn4 Celera 1 89,458,427 - 89,471,068 (+) NCBI Celera Cytogenetic Map 1 q22 NCBI
IZUMO2 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 19 50,152,548 - 50,163,281 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 19 50,152,537 - 50,163,281 (-) Ensembl hg38 GRCh38 GRCh37 19 50,655,805 - 50,666,538 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 19 55,347,617 - 55,358,350 (-) NCBI Build 36 Build 36 hg18 NCBI36 Celera 19 47,705,980 - 47,716,710 (-) NCBI Celera Cytogenetic Map 19 q13.33 NCBI HuRef 19 46,994,968 - 47,005,698 (-) NCBI HuRef CHM1_1 19 50,657,733 - 50,668,466 (-) NCBI CHM1_1 T2T-CHM13v2.0 19 53,239,990 - 53,250,721 (-) NCBI T2T-CHM13v2.0
Izumo2 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 7 44,358,122 - 44,369,272 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 7 44,358,166 - 44,369,268 (+) Ensembl GRCm39 Ensembl GRCm39 GRCm38 7 44,708,698 - 44,719,848 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 7 44,708,742 - 44,719,844 (+) Ensembl mm10 GRCm38 MGSCv37 7 51,964,113 - 51,975,212 (+) NCBI MGSCv37 MGSCv37 mm9 NCBIm37 MGSCv36 7 44,576,785 - 44,587,886 (+) NCBI MGSCv36 mm8 Celera 7 40,158,656 - 40,169,915 (+) NCBI Celera Cytogenetic Map 7 B3 NCBI cM Map 7 28.89 NCBI
Izumo2 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 NW_004955559 888,457 - 894,644 (+) NCBI ChiLan1.0 ChiLan1.0
IZUMO2 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 20 56,223,731 - 56,235,548 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 19 58,144,709 - 58,156,532 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 19 47,120,823 - 47,132,251 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 19 56,029,683 - 56,040,363 (-) NCBI PanPan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 19 56,029,683 - 56,040,363 (-) Ensembl panPan2 panpan1.1
IZUMO2 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 1 106,502,553 - 106,514,529 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 1 106,502,019 - 106,514,799 (+) Ensembl canFam3 CanFam3.1 Dog10K_Boxer_Tasha 1 106,085,940 - 106,098,542 (+) NCBI Dog10K_Boxer_Tasha Dog10K_Boxer_Tasha ROS_Cfam_1.0 1 107,023,929 - 107,036,528 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 1 107,023,925 - 107,035,807 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 1 106,695,870 - 106,708,460 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 1 106,337,806 - 106,350,406 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 1 107,178,490 - 107,191,093 (+) NCBI UU_Cfam_GSD_1.0 UU_Cfam_GSD_1.0
Izumo2
IZUMO2 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 6 55,059,771 - 55,069,429 (-) Ensembl susScr11 Sscrofa11.1 Sscrofa11.1 6 55,059,627 - 55,069,937 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 6 50,836,779 - 50,850,664 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
IZUMO2 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 6 43,213,210 - 43,225,393 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 6 43,213,266 - 43,225,135 (-) Ensembl ChlSab1.1 Ensembl chlSab2 Vervet-AGM Vero_WHO_p1.0 NW_023666073 23,191,962 - 23,205,254 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Izumo2
miRNA Target Status (No longer updated)
Predicted Target Of
Count of predictions: 379 Count of miRNA genes: 134 Interacting mature miRNAs: 150 Transcripts: ENSRNOT00000070899, ENSRNOT00000071054, ENSRNOT00000071503, ENSRNOT00000073798 Prediction methods: Microtar, Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction 
