Symbol:
Tmem270
Name:
transmembrane protein 270
RGD ID:
1561903
Description:
Predicted to be located in membrane. Orthologous to human TMEM270 (transmembrane protein 270); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; cefaloridine.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
LOC288604; RGD1561903; similar to Williams-Beuren syndrome critical region protein 28 isoform A; Wbscr28; Williams-Beuren syndrome chromosome region 28; Williams-Beuren syndrome chromosome region 28 (human)
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 12 27,430,092 - 27,435,243 (+) NCBI GRCr8 mRatBN7.2 12 21,793,631 - 21,798,723 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 12 21,794,130 - 21,798,731 (+) Ensembl mRatBN7.2 Ensembl Rnor_6.0 12 24,803,204 - 24,808,287 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 12 24,803,686 - 24,808,288 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 12 26,803,487 - 26,808,557 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 12 22,858,647 - 22,863,206 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 12 23,554,551 - 23,559,628 (+) NCBI Celera Cytogenetic Map 12 q12 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Tmem270 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 12 27,430,092 - 27,435,243 (+) NCBI GRCr8 mRatBN7.2 12 21,793,631 - 21,798,723 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 12 21,794,130 - 21,798,731 (+) Ensembl mRatBN7.2 Ensembl Rnor_6.0 12 24,803,204 - 24,808,287 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 12 24,803,686 - 24,808,288 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 12 26,803,487 - 26,808,557 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 12 22,858,647 - 22,863,206 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 12 23,554,551 - 23,559,628 (+) NCBI Celera Cytogenetic Map 12 q12 NCBI
TMEM270 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 7 73,860,848 - 73,865,890 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 7 73,861,159 - 73,865,890 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 7 73,275,489 - 73,280,220 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 7 72,913,425 - 72,918,159 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 7 68,754,191 - 68,758,926 (+) NCBI Celera Cytogenetic Map 7 q11.23 NCBI HuRef 7 69,158,848 - 69,163,564 (+) NCBI HuRef CHM1_1 7 73,420,949 - 73,425,683 (+) NCBI CHM1_1 T2T-CHM13v2.0 7 75,061,792 - 75,066,837 (+) NCBI T2T-CHM13v2.0 CRA_TCAGchr7v2 7 72,608,561 - 72,613,295 (+) NCBI
Tmem270 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 5 134,930,447 - 134,935,587 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 5 134,930,447 - 134,935,587 (-) Ensembl GRCm39 Ensembl GRCm38 5 134,901,593 - 134,906,733 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 5 134,901,593 - 134,906,733 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 5 135,377,464 - 135,382,603 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 5 135,186,221 - 135,191,360 (-) NCBI MGSCv36 mm8 Celera 5 131,912,152 - 131,917,291 (-) NCBI Celera Cytogenetic Map 5 G2 NCBI cM Map 5 74.88 NCBI
Tmem270 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 NW_004955456 13,947,773 - 13,953,965 (-) NCBI ChiLan1.0 ChiLan1.0
TMEM270 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 6 91,037,439 - 91,048,490 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 7 139,302,070 - 139,313,122 (-) NCBI NHGRI_mPanPan1 PanPan1.1 7 81,011,217 - 81,016,100 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 7 81,011,217 - 81,016,100 (+) Ensembl panpan1.1 panPan2
TMEM270 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 6 6,472,495 - 6,475,051 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 6 6,472,520 - 6,474,976 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 6 8,170,118 - 8,172,674 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 6 6,287,508 - 6,290,064 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 6 6,286,533 - 6,289,989 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 6 6,277,242 - 6,279,798 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 6 6,225,118 - 6,227,687 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 6 6,388,863 - 6,391,438 (-) NCBI UU_Cfam_GSD_1.0
Tmem270 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024409344 131,029,940 - 131,032,296 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936543 3,004,326 - 3,006,608 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936543 3,004,326 - 3,006,608 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
TMEM270 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 3 11,075,901 - 11,078,442 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 3 11,059,177 - 11,079,858 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 3 10,752,341 - 10,768,852 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
TMEM270 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 28 9,212,358 - 9,217,628 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 28 9,212,377 - 9,217,517 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666070 7,273,087 - 7,296,893 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Tmem270 (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 37 Count of miRNA genes: 36 Interacting mature miRNAs: 37 Transcripts: ENSRNOT00000033499 Prediction methods: Miranda, Rnahybrid Result types: miRGate_prediction
631560 Apr1 Acute phase response QTL 1 6.1 orosomucoid 1 amount (VT:0010541) plasma orosomucoid 1 level (CMO:0001467) 12 19144362 46669029 Rat 8552964 Pigfal17 Plasma insulin-like growth factor 1 level QTL 17 3.5 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 12 5564495 46669029 Rat 61324 Eae5 Experimental allergic encephalomyelitis QTL 5 14 nervous system integrity trait (VT:0010566) percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402) 12 19610870 46669029 Rat 9590147 Scort7 Serum corticosterone level QTL 7 13.61 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 12 1 42110980 Rat 1549829 Scl48 Serum cholesterol level QTL 48 5 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 12 9603277 46669029 Rat 61331 Eau2 Experimental allergic uveoretinitis QTL 2 0.0005 uvea integrity trait (VT:0010551) experimental autoimmune uveitis score (CMO:0001504) 12 8525423 28064601 Rat 737822 Alc10 Alcohol consumption QTL 10 2.2 consumption behavior trait (VT:0002069) ethanol drink intake rate (CMO:0001407) 12 19610870 40218516 Rat 2293684 Bmd26 Bone mineral density QTL 26 4.4 0.0002 femur mineral mass (VT:0010011) total volumetric bone mineral density (CMO:0001728) 12 15872653 32974238 Rat 6893681 Bw109 Body weight QTL 109 2.3 0.004 body mass (VT:0001259) body weight (CMO:0000012) 12 1 23297788 Rat 1302792 Scl21 Serum cholesterol level QTL 21 3.8 0.0011 blood cholesterol amount (VT:0000180) plasma total cholesterol level (CMO:0000585) 12 7196730 46669029 Rat 1598855 Bp294 Blood pressure QTL 294 3.5 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 12 1 34851688 Rat 10755457 Coatc14 Coat color QTL 14 0.01759 coat/hair pigmentation trait (VT:0010463) pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) 12 1 22591684 Rat 1331761 Bp218 Blood pressure QTL 218 2.973 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 12 11073825 45055165 Rat 8694179 Bw150 Body weight QTL 150 2.9 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 12 1 42110980 Rat 7411545 Bw128 Body weight QTL 128 5.2 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 12 1 42110980 Rat 7411547 Bw129 Body weight QTL 129 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 6 5564495 46669029 Rat 1300157 Rf21 Renal function QTL 21 4.4 renal blood flow trait (VT:2000006) absolute change in renal blood flow rate (CMO:0001168) 12 9318216 32103380 Rat 737979 Pia22 Pristane induced arthritis QTL 22 53.1 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 12 1 44465750 Rat 1298081 Cia25 Collagen induced arthritis QTL 25 4.7 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 12 19610889 35682913 Rat 2300186 Bmd59 Bone mineral density QTL 59 7.1 0.0001 lumbar vertebra mineral mass (VT:0010511) volumetric bone mineral density (CMO:0001553) 12 10474137 46669029 Rat 7411660 Foco28 Food consumption QTL 28 10.9 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 12 1 42110980 Rat 1331755 Bp219 Blood pressure QTL 219 3.041 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 12 11073825 28064557 Rat 70213 Niddm27 Non-insulin dependent diabetes mellitus QTL 27 3.72 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 12 19835789 38193007 Rat 2306789 Ean6 Experimental allergic neuritis QTL 6 4.9 nervous system integrity trait (VT:0010566) experimental autoimmune neuritis severity score (CMO:0001528) 12 19610870 24139202 Rat 7411641 Foco19 Food consumption QTL 19 27.7 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 12 5564495 46669029 Rat 7411643 Foco20 Food consumption QTL 20 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 12 20328819 46669029 Rat 5684888 Pia42 Pristane induced arthritis QTL 42 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 12 19610870 42828880 Rat 1549912 Bp268 Blood pressure QTL 268 arterial blood pressure trait (VT:2000000) diastolic blood pressure (CMO:0000005) 10 13182736 46669029 Rat 2302060 Pia37 Pristane induced arthritis QTL 37 6.1 0.001 blood immunoglobulin amount (VT:0002460) serum immunoglobulin G1 level (CMO:0002115) 12 13198157 46669029 Rat 1641928 Alcrsp5 Alcohol response QTL 5 response to alcohol trait (VT:0010489) duration of loss of righting reflex (CMO:0002289) 12 12812385 46669029 Rat 8552912 Pigfal6 Plasma insulin-like growth factor 1 level QTL 6 5 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 12 5564498 46669029 Rat 10059594 Kidm46 Kidney mass QTL 46 3.79 0.025 kidney mass (VT:0002707) both kidneys wet weight to body weight ratio (CMO:0000340) 12 6107579 46669029 Rat 1581516 Cm56 Cardiac mass QTL 56 4.2 0.05 heart left ventricle mass (VT:0007031) heart left ventricle weight to body weight ratio (CMO:0000530) 12 1 29333307 Rat 9590086 Insglur6 Insulin/glucose ratio QTL 6 18.97 0.001 blood insulin amount (VT:0001560) calculated plasma insulin level (CMO:0002170) 12 1 42110980 Rat 8552918 Pigfal7 Plasma insulin-like growth factor 1 level QTL 7 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 12 5564495 46669029 Rat 1549902 Bp269 Blood pressure QTL 269 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 12 13182736 46669029 Rat 61404 Bw120 Body weight QTL 120 5.1 body mass (VT:0001259) body mass index (BMI) (CMO:0000105) 12 12351619 46669029 Rat 1331786 Kidm11 Kidney mass QTL 11 3.571 kidney mass (VT:0002707) right kidney wet weight (CMO:0000082) 12 11073825 24234895 Rat 2293699 Bss49 Bone structure and strength QTL 49 5.61 0.0001 lumbar vertebra size trait (VT:0010518) lumbar vertebra trabecular cross-sectional area (CMO:0001692) 12 10474137 46669029 Rat 634351 Apr5 Acute phase response QTL 5 6.7 blood interleukin-6 amount (VT:0008595) plasma interleukin-6 level (CMO:0001927) 12 1 44503507 Rat 634350 Apr4 Acute phase response QTL 4 6 orosomucoid 1 amount (VT:0010541) plasma orosomucoid 1 level (CMO:0001467) 12 1172005 46172005 Rat 61416 Pia4 Pristane induced arthritis QTL 4 8.4 joint integrity trait (VT:0010548) arthritic paw count (CMO:0001460) 12 13635523 30827399 Rat 631521 Pia12 Pristane induced arthritis QTL 12 8.9 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 12 20259417 23672083 Rat 7387292 Kidm42 Kidney mass QTL 42 3.03 0.0004 kidney mass (VT:0002707) left kidney wet weight (CMO:0000083) 12 1 36247923 Rat 61421 Cia12 Collagen induced arthritis QTL 12 4.6 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 12 13635523 35682913 Rat 2303569 Gluco44 Glucose level QTL 44 2 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 12 12812385 46669029 Rat 7411586 Foco5 Food consumption QTL 5 5.4 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 12 1 42110980 Rat 2303575 Insul14 Insulin level QTL 14 4 blood insulin amount (VT:0001560) blood insulin level (CMO:0000349) 12 1 42450532 Rat 7411588 Foco6 Food consumption QTL 6 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 12 5564495 46669029 Rat 2302042 Pia38 Pristane induced arthritis QTL 38 3.5 0.001 blood immunoglobulin amount (VT:0002460) serum immunoglobulin G1 level (CMO:0002115) 12 1 44503507 Rat 7411595 Foco9 Food consumption QTL 9 4 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 12 1 42110980 Rat 7411597 Foco10 Food consumption QTL 10 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 12 5564495 46669029 Rat 2293086 Iddm30 Insulin dependent diabetes mellitus QTL 30 3.82 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 12 8449490 28302290 Rat 631543 Bp83 Blood pressure QTL 83 5.8 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 12 15550826 38478808 Rat
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
8
6
36
106
35
40
13
15
13
6
122
67
93
31
56
27
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Ensembl Acc Id:
ENSRNOT00000033499 ⟹ ENSRNOP00000034323
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 12 21,794,130 - 21,798,731 (+) Ensembl Rnor_6.0 Ensembl 12 24,803,686 - 24,808,288 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000114794 ⟹ ENSRNOP00000082087
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 12 21,794,130 - 21,798,731 (+) Ensembl
RefSeq Acc Id:
XM_006249213 ⟹ XP_006249275
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 12 27,430,092 - 27,435,243 (+) NCBI mRatBN7.2 12 21,793,631 - 21,798,723 (+) NCBI Rnor_6.0 12 24,803,204 - 24,808,287 (+) NCBI Rnor_5.0 12 26,803,487 - 26,808,557 (+) NCBI
Sequence:
TCAGCTGGTCCTTCCTGGTTCTCTGAATGGAGAAACTCCAAGACTGCACACTCATTCTCCAGCCTGAAACTGATGGGGACAGGGAAGGGACAGGGAAGGGACAGGGAGAGAGGCCTGGTGGTGAGGAT AATGGGGTGTCAGTTGAGGAAGCTAAGCTGGGGCTTCTCCTATGGCAAATCTGCTACCCTCAGGGTCCGATCTGGAAGCTGATCCAGAACCGTATTCACTTGTACCAATTTCTCCTTCTGAAGATGGC CATCTTTCAGCACTGGGTGTCGGGACTAGCCCAGGAAGCCCGGGGTTCTGGCAGTGACCAGGCCTGCCTACTTCCAGAAGTCATCATAACCTATGCTCTGGGCTTGGTCCTTCGAGCTGGACTGGCAT TGCTGTGGGTCCCTATGTGGCTGCTGCTCTGGGGACCCAGGTTGTCATACAGAGTCGGACTGTGCTGCACCCACACTATGAAGCTGGCCCTGGGGCACCTCTGTGCCTGGGAACCTCCGGGTCTGTCT CCAGCCACCTTCAGGGACCTGTTTCTATCCTGCCTGCATCGCCTGATGCTGGTGGCCTTGCTGGTACTGCTGCTAACCTGGAAGCTGTTGCAGAAAGCCCATCACTCCAGTCTGGGCTGGCTGCACAG CCAGAGTTCTATGCTCCTGGAAGCCCTGGCTTTGCTGAGACGCCTCTACCTGTGGGTGGAGCACAGGACCACACTCACTTCCTGGAACCTGGCCTATCTTGTCACTTGGACTACCTGTCTCGCTTCCC ACCTGCTTCAAGCTGCCTTTGAGCACACAGCCCAACTGGCCCAGGCCCAGGAGGTCTCATTCGAGGAGACCTCAGAGCCCTCATCTCAGTTCTTAATTCCAGAATCCTCCACCACCGAGTCTGGACCC CTCCCTTCCCAGCCTGAAACCCCCGGAGAATAAATGTGTCCCCCACCTGCC
hide sequence
RefSeq Acc Id:
XM_017598507 ⟹ XP_017453996
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 12 27,430,657 - 27,435,243 (+) NCBI mRatBN7.2 12 21,794,137 - 21,798,723 (+) NCBI Rnor_6.0 12 24,803,700 - 24,808,287 (+) NCBI
Sequence:
TGGCTGGAGGAATGGACGGAGGCCAGACATGGAGGCCGCTCCCCGGGTCAGATTTGGCCTTCCT AGAATTCTCCTGCAGGTTGGGAAGCTCTCTGCGCTGCTTTCCTCATGATGACAAGGGCAACCAGGGTCCCAGGCGAGCCCAGGGATTTGGGGGAAGCCAGCCAGCCGTGTGTTCGAATCCCACAGTTA ATCAGAGGGGAGCTGATCCAGAACCGTATTCACTTGTACCAATTTCTCCTTCTGAAGATGGCCATCTTTCAGCACTGGGTGTCGGGACTAGCCCAGGAAGCCCGGGGTTCTGGCAGTGACCAGGCCTG CCTACTTCCAGAAGTCATCATAACCTATGCTCTGGGCTTGGTCCTTCGAGCTGGACTGGCATTGCTGTGGGTCCCTATGTGGCTGCTGCTCTGGGGACCCAGGTTGTCATACAGAGTCGGACTGTGCT GCACCCACACTATGAAGCTGGCCCTGGGGCACCTCTGTGCCTGGGAACCTCCGGGTCTGTCTCCAGCCACCTTCAGGGACCTGTTTCTATCCTGCCTGCATCGCCTGATGCTGGTGGCCTTGCTGGTA CTGCTGCTAACCTGGAAGCTGTTGCAGAAAGCCCATCACTCCAGTCTGGGCTGGCTGCACAGCCAGAGTTCTATGCTCCTGGAAGCCCTGGCTTTGCTGAGACGCCTCTACCTGTGGGTGGAGCACAG GACCACACTCACTTCCTGGAACCTGGCCTATCTTGTCACTTGGACTACCTGTCTCGCTTCCCACCTGCTTCAAGCTGCCTTTGAGCACACAGCCCAACTGGCCCAGGCCCAGGAGGTCTCATTCGAGG AGACCTCAGAGCCCTCATCTCAGTTCTTAATTCCAGAATCCTCCACCACCGAGTCTGGACCCCTCCCTTCCCAGCCTGAAACCCCCGGAGAATAAATGTGTCCCCCACCTGCC
hide sequence
RefSeq Acc Id:
XM_213758 ⟹ XP_213758
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 12 27,430,533 - 27,435,243 (+) NCBI mRatBN7.2 12 21,794,110 - 21,798,723 (+) NCBI Rnor_6.0 12 24,803,689 - 24,808,287 (+) NCBI Rnor_5.0 12 26,803,487 - 26,808,557 (+) NCBI RGSC_v3.4 12 22,858,647 - 22,863,206 (+) RGD
Sequence:
CCTGCCTCTCCTGGCTGGAGGAATGGACGGAGGCCAGACATGGAGGCCGCTCCCCGGGTCAGATTTGGCCTTCCTAGAATTCTCCTGCAGGTTGGGAAGCTCTCTGCGCTGCTGATCCAGAACCGTAT TCACTTGTACCAATTTCTCCTTCTGAAGATGGCCATCTTTCAGCACTGGGTGTCGGGACTAGCCCAGGAAGCCCGGGGTTCTGGCAGTGACCAGGCCTGCCTACTTCCAGAAGTCATCATAACCTATG CTCTGGGCTTGGTCCTTCGAGCTGGACTGGCATTGCTGTGGGTCCCTATGTGGCTGCTGCTCTGGGGACCCAGGTTGTCATACAGAGTCGGACTGTGCTGCACCCACACTATGAAGCTGGCCCTGGGG CACCTCTGTGCCTGGGAACCTCCGGGTCTGTCTCCAGCCACCTTCAGGGACCTGTTTCTATCCTGCCTGCATCGCCTGATGCTGGTGGCCTTGCTGGTACTGCTGCTAACCTGGAAGCTGTTGCAGAA AGCCCATCACTCCAGTCTGGGCTGGCTGCACAGCCAGAGTTCTATGCTCCTGGAAGCCCTGGCTTTGCTGAGACGCCTCTACCTGTGGGTGGAGCACAGGACCACACTCACTTCCTGGAACCTGGCCT ATCTTGTCACTTGGACTACCTGTCTCGCTTCCCACCTGCTTCAAGCTGCCTTTGAGCACACAGCCCAACTGGCCCAGGCCCAGGAGGTCTCATTCGAGGAGACCTCAGAGCCCTCATCTCAGTTCTTA ATTCCAGAATCCTCCACCACCGAGTCTGGACCCCTCCCTTCCCAGCCTGAAACCCCCGGAGAATAAATGTGTCCCCCACCTGCC
hide sequence
RefSeq Acc Id:
XP_213758 ⟸ XM_213758
- Peptide Label:
isoform X3
- Sequence:
MEAAPRVRFGLPRILLQVGKLSALLIQNRIHLYQFLLLKMAIFQHWVSGLAQEARGSGSDQACLLPEVIITYALGLVLRAGLALLWVPMWLLLWGPRLSYRVGLCCTHTMKLALGHLCAWEPPGLSPA TFRDLFLSCLHRLMLVALLVLLLTWKLLQKAHHSSLGWLHSQSSMLLEALALLRRLYLWVEHRTTLTSWNLAYLVTWTTCLASHLLQAAFEHTAQLAQAQEVSFEETSEPSSQFLIPESSTTESGPLP SQPETPGE
hide sequence
RefSeq Acc Id:
XP_006249275 ⟸ XM_006249213
- Peptide Label:
isoform X1
- Sequence:
MEKLQDCTLILQPETDGDREGTGKGQGERPGGEDNGVSVEEAKLGLLLWQICYPQGPIWKLIQN RIHLYQFLLLKMAIFQHWVSGLAQEARGSGSDQACLLPEVIITYALGLVLRAGLALLWVPMWLLLWGPRLSYRVGLCCTHTMKLALGHLCAWEPPGLSPATFRDLFLSCLHRLMLVALLVLLLTWKLL QKAHHSSLGWLHSQSSMLLEALALLRRLYLWVEHRTTLTSWNLAYLVTWTTCLASHLLQAAFEHTAQLAQAQEVSFEETSEPSSQFLIPESSTTESGPLPSQPETPGE
hide sequence
RefSeq Acc Id:
XP_017453996 ⟸ XM_017598507
- Peptide Label:
isoform X2
- Sequence:
MMTRATRVPGEPRDLGEASQPCVRIPQLIRGELIQNRIHLYQFLLLKMAIFQHWVSGLAQEARGSGSDQACLLPEVIITYALGLVLRAGLALLWVPMWLLLWGPRLSYRVGLCCTHTMKLALGHLCAW EPPGLSPATFRDLFLSCLHRLMLVALLVLLLTWKLLQKAHHSSLGWLHSQSSMLLEALALLRRLYLWVEHRTTLTSWNLAYLVTWTTCLASHLLQAAFEHTAQLAQAQEVSFEETSEPSSQFLIPESS TTESGPLPSQPETPGE
hide sequence
Ensembl Acc Id:
ENSRNOP00000034323 ⟸ ENSRNOT00000033499
Ensembl Acc Id:
ENSRNOP00000082087 ⟸ ENSRNOT00000114794
RGD ID: 13698570
Promoter ID: EPDNEW_R9090
Type: single initiation site
Name: Tmem270_1
Description: transmembrane protein 270
SO ACC ID: SO:0000170
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Experiment Methods: Single-end sequencing.
Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 12 24,803,694 - 24,803,754 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2017-05-18
Tmem270
transmembrane protein 270
Wbscr28
Williams-Beuren syndrome chromosome region 28
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2013-02-04
Wbscr28
Williams-Beuren syndrome chromosome region 28
Wbscr28
Williams-Beuren syndrome chromosome region 28 (human)
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2008-02-29
Wbscr28
Williams-Beuren syndrome chromosome region 28 (human)
RGD1561903_predicted
similar to Williams-Beuren syndrome critical region protein 28 isoform A (predicted)
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2006-03-07
RGD1561903_predicted
similar to Williams-Beuren syndrome critical region protein 28 isoform A (predicted)
LOC288604
similar to Williams-Beuren syndrome critical region protein 28 isoform A
Symbol and Name status set to approved
1299863
APPROVED
2006-02-09
LOC288604
similar to Williams-Beuren syndrome critical region protein 28 isoform A
Symbol and Name status set to provisional
70820
PROVISIONAL