Symbol:
Cers6
Name:
ceramide synthase 6
RGD ID:
1561599
Description:
Predicted to enable sphingosine N-acyltransferase activity. Involved in oligodendrocyte development and positive regulation of oligodendrocyte apoptotic process. Predicted to be located in endoplasmic reticulum. Orthologous to human CERS6 (ceramide synthase 6); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
LAG1 homolog, ceramide synthase 6; LAG1 longevity assurance homolog 6; Lass6; LOC366065; RGD1561599; similar to longevity assurance homolog 6
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
CERS6 (ceramide synthase 6) HGNC
Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):
Cers6 (ceramide synthase 6) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Cers6 (ceramide synthase 6) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
CERS6 (ceramide synthase 6) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
CERS6 (ceramide synthase 6) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Cers6 (ceramide synthase 6) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
CERS6 (ceramide synthase 6) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
CERS6 (ceramide synthase 6) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Cers6 (ceramide synthase 6) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Homo sapiens (human):
CERS6 (ceramide synthase 6)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Cers6 (ceramide synthase 6)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
cers6 (ceramide synthase 6)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):
LAC1
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OrthoFinder|PANTHER|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):
LAG1
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OrthoFinder|PANTHER|SonicParanoid)
Caenorhabditis elegans (roundworm):
hyl-1
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Caenorhabditis elegans (roundworm):
hyl-2
Alliance
DIOPT (Ensembl Compara|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Drosophila melanogaster (fruit fly):
schlank
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
cers6
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 3 74,038,520 - 74,287,544 (+) NCBI GRCr8 mRatBN7.2 3 53,630,637 - 53,879,692 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 3 53,630,959 - 53,876,848 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 3 57,031,533 - 57,280,360 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 3 65,615,110 - 65,863,927 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 3 63,377,005 - 63,625,848 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 3 55,094,240 - 55,338,370 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 3 55,094,637 - 55,338,445 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 3 61,707,597 - 61,950,319 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 3 50,979,559 - 51,252,510 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 3 53,194,291 - 53,442,587 (+) NCBI Celera Cytogenetic Map 3 q21 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Cers6 Rat (1->4)-beta-D-glucan multiple interactions ISO Cers6 (Mus musculus) 6480464 [perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of CERS6 mRNA CTD PMID:36331819 Cers6 Rat (S)-nicotine multiple interactions ISO CERS6 (Homo sapiens) 6480464 [Nicotine co-treated with Propylene Glycol co-treated with Glycerol co-treated with Flavoring Agents] results in increased expression of CERS6 mRNA CTD PMID:28065790 Cers6 Rat 1,2-dimethylhydrazine decreases expression ISO Cers6 (Mus musculus) 6480464 1 and 2-Dimethylhydrazine results in decreased expression of LASS6 mRNA CTD PMID:22206623 Cers6 Rat 17alpha-ethynylestradiol increases expression EXP 6480464 Ethinyl Estradiol results in increased expression of CERS6 mRNA CTD PMID:29097150 Cers6 Rat 17beta-estradiol affects expression ISO CERS6 (Homo sapiens) 6480464 Estradiol affects the expression of CERS6 mRNA CTD PMID:14699072 Cers6 Rat 17beta-estradiol increases expression ISO CERS6 (Homo sapiens) 6480464 Estradiol results in increased expression of CERS6 mRNA CTD PMID:31614463 Cers6 Rat 17beta-estradiol decreases expression ISO Cers6 (Mus musculus) 6480464 Estradiol results in decreased expression of CERS6 mRNA CTD PMID:39298647 Cers6 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO Cers6 (Mus musculus) 6480464 Tetrachlorodibenzodioxin affects the expression of CERS6 mRNA CTD PMID:24058054 Cers6 Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression EXP 6480464 Tetrachlorodibenzodioxin results in increased expression of CERS6 mRNA CTD PMID:33387578 Cers6 Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression ISO Cers6 (Mus musculus) 6480464 Tetrachlorodibenzodioxin results in increased expression of CERS6 mRNA CTD PMID:28238261 Cers6 Rat 2,3,7,8-tetrachlorodibenzodioxine multiple interactions ISO Cers6 (Mus musculus) 6480464 [TIPARP gene mutant form results in increased susceptibility to Tetrachlorodibenzodioxin] which results in decreased expression of LASS6 mRNA CTD PMID:25975270 Cers6 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression EXP 6480464 Tetrachlorodibenzodioxin affects the expression of CERS6 mRNA CTD PMID:22298810 and PMID:32109520 Cers6 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO CERS6 (Homo sapiens) 6480464 Tetrachlorodibenzodioxin results in decreased expression of CERS6 mRNA CTD PMID:17101203 Cers6 Rat 2,3,7,8-Tetrachlorodibenzofuran decreases expression EXP 6480464 2 more ... CTD PMID:32109520 Cers6 Rat 2,3,7,8-Tetrachlorodibenzofuran multiple interactions ISO Cers6 (Mus musculus) 6480464 AHR gene mutant form inhibits the reaction [2 more ... CTD PMID:34097992 Cers6 Rat 2,3,7,8-Tetrachlorodibenzofuran increases expression ISO Cers6 (Mus musculus) 6480464 2 more ... CTD PMID:34097992 Cers6 Rat 2-hydroxypropanoic acid increases expression ISO CERS6 (Homo sapiens) 6480464 Lactic Acid results in increased expression of CERS6 mRNA CTD PMID:30851411 Cers6 Rat 4,4'-sulfonyldiphenol decreases expression ISO Cers6 (Mus musculus) 6480464 bisphenol S results in decreased expression of CERS6 mRNA CTD PMID:39298647 Cers6 Rat 6-propyl-2-thiouracil decreases expression EXP 6480464 Propylthiouracil results in decreased expression of CERS6 mRNA CTD PMID:30047161 Cers6 Rat acrylamide increases expression ISO CERS6 (Homo sapiens) 6480464 Acrylamide results in increased expression of CERS6 mRNA CTD PMID:32763439 Cers6 Rat aflatoxin B1 decreases expression ISO CERS6 (Homo sapiens) 6480464 Aflatoxin B1 results in decreased expression of CERS6 mRNA CTD PMID:21641981 Cers6 Rat aflatoxin B1 decreases methylation ISO CERS6 (Homo sapiens) 6480464 Aflatoxin B1 results in decreased methylation of CERS6 gene CTD PMID:27153756 Cers6 Rat amitrole decreases expression EXP 6480464 Amitrole results in decreased expression of CERS6 mRNA CTD PMID:30047161 Cers6 Rat aristolochic acid A decreases expression ISO CERS6 (Homo sapiens) 6480464 aristolochic acid I results in decreased expression of CERS6 mRNA CTD PMID:33212167 Cers6 Rat arsane multiple interactions ISO CERS6 (Homo sapiens) 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of CERS6 mRNA and [sodium arsenite results in increased abundance of Arsenic] which results in increased expression of CERS6 mRNA CTD PMID:39836092 Cers6 Rat arsenic atom multiple interactions ISO CERS6 (Homo sapiens) 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of CERS6 mRNA and [sodium arsenite results in increased abundance of Arsenic] which results in increased expression of CERS6 mRNA CTD PMID:39836092 Cers6 Rat arsenite(3-) multiple interactions ISO CERS6 (Homo sapiens) 6480464 arsenite inhibits the reaction [G3BP1 protein binds to CERS6 mRNA] CTD PMID:32406909 Cers6 Rat Benoxacor decreases expression ISO Cers6 (Mus musculus) 6480464 benoxacor results in decreased expression of CERS6 mRNA CTD PMID:34850242 Cers6 Rat benzo[a]pyrene decreases expression ISO Cers6 (Mus musculus) 6480464 Benzo(a)pyrene results in decreased expression of CERS6 mRNA CTD PMID:19770486 Cers6 Rat benzo[a]pyrene increases methylation ISO CERS6 (Homo sapiens) 6480464 Benzo(a)pyrene results in increased methylation of LASS6 promoter CTD PMID:27901495 Cers6 Rat benzo[a]pyrene decreases methylation ISO Cers6 (Mus musculus) 6480464 Benzo(a)pyrene results in decreased methylation of CERS6 intron CTD PMID:27901495 Cers6 Rat benzo[a]pyrene decreases expression ISO CERS6 (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased expression of CERS6 mRNA CTD PMID:20064835 more ... Cers6 Rat beta-hexachlorocyclohexane decreases expression ISO Cers6 (Mus musculus) 6480464 beta-hexachlorocyclohexane results in decreased expression of CERS6 mRNA CTD PMID:25270620 Cers6 Rat bisphenol A affects expression EXP 6480464 bisphenol A affects the expression of CERS6 mRNA CTD PMID:25181051 Cers6 Rat bisphenol A multiple interactions ISO CERS6 (Homo sapiens) 6480464 [bisphenol A co-treated with Fulvestrant] results in increased methylation of CERS6 gene CTD PMID:31601247 Cers6 Rat bisphenol A increases expression ISO Cers6 (Mus musculus) 6480464 bisphenol A results in increased expression of CERS6 mRNA CTD PMID:38701888 Cers6 Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of CERS6 mRNA CTD PMID:30816183 Cers6 Rat bisphenol A increases expression ISO CERS6 (Homo sapiens) 6480464 bisphenol A results in increased expression of CERS6 mRNA CTD PMID:29275510 Cers6 Rat bisphenol A affects methylation ISO Cers6 (Mus musculus) 6480464 bisphenol A affects the methylation of CERS6 promoter CTD PMID:27334623 Cers6 Rat bortezomib multiple interactions ISO CERS6 (Homo sapiens) 6480464 Bortezomib inhibits the reaction [CERS6 protein affects the expression of ABCB1 protein] CTD PMID:34915026 Cers6 Rat calyculin a decreases expression ISO Cers6 (Mus musculus) 6480464 calyculin A results in decreased expression of CERS6 mRNA CTD PMID:25270620 Cers6 Rat carbon nanotube increases expression ISO Cers6 (Mus musculus) 6480464 Nanotubes more ... CTD PMID:25554681 Cers6 Rat chloropicrin decreases expression ISO CERS6 (Homo sapiens) 6480464 chloropicrin results in decreased expression of LASS6 mRNA CTD PMID:26352163 Cers6 Rat cisplatin decreases expression ISO CERS6 (Homo sapiens) 6480464 Cisplatin results in decreased expression of CERS6 mRNA CTD PMID:19561079 Cers6 Rat cisplatin increases expression ISO CERS6 (Homo sapiens) 6480464 Cisplatin results in increased expression of CERS6 mRNA CTD PMID:27392435 Cers6 Rat Dibutyl phosphate affects expression ISO CERS6 (Homo sapiens) 6480464 di-n-butylphosphoric acid affects the expression of CERS6 mRNA CTD PMID:37042841 Cers6 Rat dibutyl phthalate increases expression ISO Cers6 (Mus musculus) 6480464 Dibutyl Phthalate results in increased expression of CERS6 mRNA CTD PMID:21266533 Cers6 Rat dichloroacetic acid increases expression ISO Cers6 (Mus musculus) 6480464 Dichloroacetic Acid results in increased expression of CERS6 mRNA CTD PMID:28962523 Cers6 Rat diclofenac increases expression ISO Cers6 (Mus musculus) 6480464 Diclofenac results in increased expression of CERS6 mRNA CTD PMID:26934552 Cers6 Rat doxorubicin decreases expression ISO CERS6 (Homo sapiens) 6480464 Doxorubicin results in decreased expression of CERS6 mRNA CTD PMID:29803840 Cers6 Rat doxorubicin affects response to substance ISO CERS6 (Homo sapiens) 6480464 CERS6 protein affects the susceptibility to Doxorubicin CTD PMID:34915026 Cers6 Rat endosulfan increases expression EXP 6480464 Endosulfan results in increased expression of CERS6 mRNA CTD PMID:29391264 Cers6 Rat epoxiconazole decreases expression ISO Cers6 (Mus musculus) 6480464 epoxiconazole results in decreased expression of CERS6 mRNA CTD PMID:35436446 Cers6 Rat fentin chloride increases expression EXP 6480464 triphenyltin chloride results in increased expression of CERS6 mRNA CTD PMID:37156404 Cers6 Rat FR900359 increases phosphorylation ISO CERS6 (Homo sapiens) 6480464 FR900359 results in increased phosphorylation of CERS6 protein CTD PMID:37730182 Cers6 Rat fulvestrant multiple interactions ISO CERS6 (Homo sapiens) 6480464 [bisphenol A co-treated with Fulvestrant] results in increased methylation of CERS6 gene CTD PMID:31601247 Cers6 Rat gallic acid decreases expression ISO CERS6 (Homo sapiens) 6480464 Gallic Acid results in decreased expression of CERS6 mRNA CTD PMID:34408198 Cers6 Rat geldanamycin increases expression ISO CERS6 (Homo sapiens) 6480464 geldanamycin results in increased expression of CERS6 mRNA CTD PMID:26705709 Cers6 Rat gentamycin increases expression EXP 6480464 Gentamicins results in increased expression of CERS6 mRNA CTD PMID:33387578 Cers6 Rat glycerol multiple interactions ISO CERS6 (Homo sapiens) 6480464 [Nicotine co-treated with Propylene Glycol co-treated with Glycerol co-treated with Flavoring Agents] results in increased expression of CERS6 mRNA CTD PMID:28065790 Cers6 Rat leflunomide increases expression ISO CERS6 (Homo sapiens) 6480464 leflunomide results in increased expression of CERS6 mRNA CTD PMID:28988120 Cers6 Rat manganese atom multiple interactions ISO CERS6 (Homo sapiens) 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of CERS6 mRNA CTD PMID:39836092 Cers6 Rat manganese(0) multiple interactions ISO CERS6 (Homo sapiens) 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of CERS6 mRNA CTD PMID:39836092 Cers6 Rat manganese(II) chloride increases expression EXP 6480464 manganese chloride results in increased expression of CERS6 mRNA CTD PMID:28801915 Cers6 Rat manganese(II) chloride multiple interactions ISO CERS6 (Homo sapiens) 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of CERS6 mRNA CTD PMID:39836092 Cers6 Rat methimazole decreases expression EXP 6480464 Methimazole results in decreased expression of CERS6 mRNA CTD PMID:30047161 Cers6 Rat methylmercury chloride increases expression ISO CERS6 (Homo sapiens) 6480464 methylmercuric chloride results in increased expression of CERS6 mRNA CTD PMID:28001369 Cers6 Rat N,N-diethyl-m-toluamide multiple interactions EXP 6480464 [Permethrin co-treated with DEET] results in decreased methylation of CERS6 gene CTD PMID:33148267 Cers6 Rat N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal multiple interactions ISO CERS6 (Homo sapiens) 6480464 benzyloxycarbonylleucyl-leucyl-leucine aldehyde inhibits the reaction [CERS6 protein affects the expression of ABCB1 protein] CTD PMID:34915026 Cers6 Rat N-methyl-4-phenylpyridinium increases expression EXP 6480464 1-Methyl-4-phenylpyridinium results in increased expression of CERS6 mRNA CTD PMID:28801915 Cers6 Rat N-nitrosodiethylamine increases expression ISO Cers6 (Mus musculus) 6480464 Diethylnitrosamine results in increased expression of LASS6 mRNA CTD PMID:24535843 Cers6 Rat nickel sulfate increases expression ISO CERS6 (Homo sapiens) 6480464 nickel sulfate results in increased expression of LASS6 mRNA CTD PMID:22714537 Cers6 Rat nicotine multiple interactions ISO CERS6 (Homo sapiens) 6480464 [Nicotine co-treated with Propylene Glycol co-treated with Glycerol co-treated with Flavoring Agents] results in increased expression of CERS6 mRNA CTD PMID:28065790 Cers6 Rat ozone decreases expression EXP 6480464 Ozone results in decreased expression of CERS6 mRNA CTD PMID:35737395 Cers6 Rat paracetamol affects expression ISO Cers6 (Mus musculus) 6480464 Acetaminophen affects the expression of CERS6 mRNA CTD PMID:17562736 Cers6 Rat paracetamol increases expression EXP 6480464 Acetaminophen results in increased expression of CERS6 mRNA CTD PMID:33387578 Cers6 Rat paracetamol increases expression ISO CERS6 (Homo sapiens) 6480464 Acetaminophen results in increased expression of CERS6 mRNA CTD PMID:21420995 Cers6 Rat perfluorononanoic acid increases expression ISO CERS6 (Homo sapiens) 6480464 perfluoro-n-nonanoic acid results in increased expression of CERS6 mRNA CTD PMID:32588087 Cers6 Rat perfluorooctane-1-sulfonic acid multiple interactions ISO Cers6 (Mus musculus) 6480464 [perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of CERS6 mRNA and [perfluorooctane sulfonic acid co-treated with Pectins] results in increased expression of CERS6 mRNA CTD PMID:36331819 Cers6 Rat permethrin multiple interactions EXP 6480464 [Permethrin co-treated with DEET] results in decreased methylation of CERS6 gene CTD PMID:33148267 Cers6 Rat pravastatin decreases expression ISO Cers6 (Mus musculus) 6480464 Pravastatin results in decreased expression of CERS6 mRNA CTD PMID:27225895 Cers6 Rat progesterone increases expression ISO CERS6 (Homo sapiens) 6480464 Progesterone results in increased expression of CERS6 mRNA CTD PMID:20864642 Cers6 Rat propane-1,2-diol multiple interactions ISO CERS6 (Homo sapiens) 6480464 [Nicotine co-treated with Propylene Glycol co-treated with Glycerol co-treated with Flavoring Agents] results in increased expression of CERS6 mRNA CTD PMID:28065790 Cers6 Rat propiconazole increases expression ISO Cers6 (Mus musculus) 6480464 propiconazole results in increased expression of CERS6 mRNA CTD PMID:21278054 Cers6 Rat rac-lactic acid increases expression ISO CERS6 (Homo sapiens) 6480464 Lactic Acid results in increased expression of CERS6 mRNA CTD PMID:30851411 Cers6 Rat raloxifene multiple interactions ISO CERS6 (Homo sapiens) 6480464 [Raloxifene Hydrochloride co-treated with ESR2 protein] results in decreased expression of CERS6 mRNA CTD PMID:19059307 Cers6 Rat resveratrol increases expression ISO CERS6 (Homo sapiens) 6480464 resveratrol results in increased expression of CERS6 mRNA CTD PMID:20401667 Cers6 Rat silicon dioxide decreases expression ISO CERS6 (Homo sapiens) 6480464 Silicon Dioxide results in decreased expression of CERS6 mRNA CTD PMID:25351596 Cers6 Rat sodium arsenite decreases expression ISO CERS6 (Homo sapiens) 6480464 sodium arsenite results in decreased expression of CERS6 mRNA CTD PMID:28595984 Cers6 Rat sodium arsenite increases expression ISO Cers6 (Mus musculus) 6480464 sodium arsenite results in increased expression of CERS6 mRNA CTD PMID:36209798 Cers6 Rat sodium arsenite multiple interactions ISO CERS6 (Homo sapiens) 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of CERS6 mRNA and [sodium arsenite results in increased abundance of Arsenic] which results in increased expression of CERS6 mRNA CTD PMID:39836092 Cers6 Rat sodium arsenite affects expression ISO CERS6 (Homo sapiens) 6480464 sodium arsenite affects the expression of CERS6 mRNA CTD PMID:34032870 Cers6 Rat sodium arsenite increases expression ISO CERS6 (Homo sapiens) 6480464 sodium arsenite results in increased expression of CERS6 mRNA CTD PMID:38568856 Cers6 Rat tamoxifen multiple interactions ISO CERS6 (Homo sapiens) 6480464 [Tamoxifen co-treated with ESR2 protein] results in decreased expression of CERS6 mRNA CTD PMID:19059307 Cers6 Rat tamoxifen affects expression ISO CERS6 (Homo sapiens) 6480464 Tamoxifen affects the expression of CERS6 mRNA CTD PMID:14699072 Cers6 Rat temozolomide decreases expression ISO CERS6 (Homo sapiens) 6480464 Temozolomide results in decreased expression of CERS6 mRNA CTD PMID:31758290 Cers6 Rat tetrachloroethene increases expression ISO Cers6 (Mus musculus) 6480464 Tetrachloroethylene results in increased expression of CERS6 mRNA CTD PMID:28973375 Cers6 Rat tetrachloromethane affects expression ISO Cers6 (Mus musculus) 6480464 Carbon Tetrachloride affects the expression of CERS6 mRNA CTD PMID:17484886 Cers6 Rat tetrachloromethane increases expression ISO Cers6 (Mus musculus) 6480464 Carbon Tetrachloride results in increased expression of CERS6 mRNA CTD PMID:31919559 Cers6 Rat titanium dioxide decreases methylation ISO Cers6 (Mus musculus) 6480464 titanium dioxide results in decreased methylation of LASS6 gene CTD PMID:35295148 Cers6 Rat trichostatin A decreases expression ISO CERS6 (Homo sapiens) 6480464 trichostatin A results in decreased expression of LASS6 mRNA CTD PMID:24935251 Cers6 Rat triclocarban increases expression EXP 6480464 triclocarban results in increased expression of CERS6 mRNA CTD PMID:31576746 Cers6 Rat triphenyl phosphate increases expression EXP 6480464 triphenyl phosphate results in increased expression of CERS6 mRNA CTD PMID:30589522 Cers6 Rat triphenyl phosphate affects expression ISO CERS6 (Homo sapiens) 6480464 triphenyl phosphate affects the expression of CERS6 mRNA CTD PMID:37042841 Cers6 Rat triptonide decreases expression ISO Cers6 (Mus musculus) 6480464 triptonide results in decreased expression of CERS6 mRNA CTD PMID:33045310 Cers6 Rat urethane increases expression ISO CERS6 (Homo sapiens) 6480464 Urethane results in increased expression of CERS6 mRNA CTD PMID:28818685 Cers6 Rat valproic acid increases expression ISO Cers6 (Mus musculus) 6480464 Valproic Acid results in increased expression of CERS6 mRNA CTD PMID:21427059 Cers6 Rat valproic acid increases expression ISO CERS6 (Homo sapiens) 6480464 Valproic Acid results in increased expression of CERS6 mRNA and Valproic Acid results in increased expression of LASS6 mRNA CTD PMID:24935251 and PMID:29154799 Cers6 Rat zaragozic acid A increases expression ISO Cers6 (Mus musculus) 6480464 squalestatin 1 results in increased expression of CERS6 mRNA CTD PMID:27225895 Cers6 Rat zaragozic acid A increases expression EXP 6480464 squalestatin 1 results in increased expression of CERS6 mRNA CTD PMID:27225895 Cers6 Rat zinc atom multiple interactions ISO CERS6 (Homo sapiens) 6480464 [PCI 5002 co-treated with Zinc] results in increased expression of CERS6 mRNA CTD PMID:18593933 Cers6 Rat zinc(0) multiple interactions ISO CERS6 (Homo sapiens) 6480464 [PCI 5002 co-treated with Zinc] results in increased expression of CERS6 mRNA CTD PMID:18593933
(1->4)-beta-D-glucan (ISO) (S)-nicotine (ISO) 1,2-dimethylhydrazine (ISO) 17alpha-ethynylestradiol (EXP) 17beta-estradiol (ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2,3,7,8-Tetrachlorodibenzofuran (EXP,ISO) 2-hydroxypropanoic acid (ISO) 4,4'-sulfonyldiphenol (ISO) 6-propyl-2-thiouracil (EXP) acrylamide (ISO) aflatoxin B1 (ISO) amitrole (EXP) aristolochic acid A (ISO) arsane (ISO) arsenic atom (ISO) arsenite(3-) (ISO) Benoxacor (ISO) benzo[a]pyrene (ISO) beta-hexachlorocyclohexane (ISO) bisphenol A (EXP,ISO) bortezomib (ISO) calyculin a (ISO) carbon nanotube (ISO) chloropicrin (ISO) cisplatin (ISO) Dibutyl phosphate (ISO) dibutyl phthalate (ISO) dichloroacetic acid (ISO) diclofenac (ISO) doxorubicin (ISO) endosulfan (EXP) epoxiconazole (ISO) fentin chloride (EXP) FR900359 (ISO) fulvestrant (ISO) gallic acid (ISO) geldanamycin (ISO) gentamycin (EXP) glycerol (ISO) leflunomide (ISO) manganese atom (ISO) manganese(0) (ISO) manganese(II) chloride (EXP,ISO) methimazole (EXP) methylmercury chloride (ISO) N,N-diethyl-m-toluamide (EXP) N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal (ISO) N-methyl-4-phenylpyridinium (EXP) N-nitrosodiethylamine (ISO) nickel sulfate (ISO) nicotine (ISO) ozone (EXP) paracetamol (EXP,ISO) perfluorononanoic acid (ISO) perfluorooctane-1-sulfonic acid (ISO) permethrin (EXP) pravastatin (ISO) progesterone (ISO) propane-1,2-diol (ISO) propiconazole (ISO) rac-lactic acid (ISO) raloxifene (ISO) resveratrol (ISO) silicon dioxide (ISO) sodium arsenite (ISO) tamoxifen (ISO) temozolomide (ISO) tetrachloroethene (ISO) tetrachloromethane (ISO) titanium dioxide (ISO) trichostatin A (ISO) triclocarban (EXP) triphenyl phosphate (EXP,ISO) triptonide (ISO) urethane (ISO) valproic acid (ISO) zaragozic acid A (EXP,ISO) zinc atom (ISO) zinc(0) (ISO)
Cers6 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 3 74,038,520 - 74,287,544 (+) NCBI GRCr8 mRatBN7.2 3 53,630,637 - 53,879,692 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 3 53,630,959 - 53,876,848 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 3 57,031,533 - 57,280,360 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 3 65,615,110 - 65,863,927 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 3 63,377,005 - 63,625,848 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 3 55,094,240 - 55,338,370 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 3 55,094,637 - 55,338,445 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 3 61,707,597 - 61,950,319 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 3 50,979,559 - 51,252,510 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 3 53,194,291 - 53,442,587 (+) NCBI Celera Cytogenetic Map 3 q21 NCBI
CERS6 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 2 168,456,272 - 168,775,134 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 2 168,456,249 - 168,775,134 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 2 169,312,782 - 169,631,644 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 2 169,021,081 - 169,339,398 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 2 169,138,341 - 169,456,659 NCBI Celera 2 162,921,561 - 163,239,455 (+) NCBI Celera Cytogenetic Map 2 q24.3 NCBI HuRef 2 161,192,334 - 161,510,650 (+) NCBI HuRef CHM1_1 2 169,318,813 - 169,637,448 (+) NCBI CHM1_1 T2T-CHM13v2.0 2 168,914,043 - 169,232,607 (+) NCBI T2T-CHM13v2.0
Cers6 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 2 68,691,489 - 68,944,628 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 2 68,691,785 - 68,944,626 (+) Ensembl GRCm39 Ensembl GRCm38 2 68,861,145 - 69,114,284 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 2 68,861,441 - 69,114,282 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 2 68,699,614 - 68,949,347 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 2 68,662,396 - 68,912,129 (+) NCBI MGSCv36 mm8 Celera 2 70,531,557 - 70,777,053 (+) NCBI Celera Cytogenetic Map 2 C2 NCBI cM Map 2 39.53 NCBI
Cers6 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955449 5,642,341 - 5,920,573 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955449 5,636,678 - 5,920,377 (-) NCBI ChiLan1.0 ChiLan1.0
CERS6 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 13 71,093,865 - 71,419,931 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 2B 71,108,853 - 71,434,905 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 2B 55,711,661 - 56,036,909 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 2B 173,180,442 - 173,504,024 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 2B 173,180,436 - 173,498,553 (+) Ensembl panpan1.1 panPan2
CERS6 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 36 13,307,461 - 13,608,123 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 36 13,308,110 - 13,602,875 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 36 13,317,100 - 13,619,138 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 36 13,421,960 - 13,724,119 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 36 13,421,381 - 13,724,116 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 36 13,508,151 - 13,809,389 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 36 13,494,552 - 13,796,285 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 36 13,607,070 - 13,909,590 (+) NCBI UU_Cfam_GSD_1.0
Cers6 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405303 130,590,704 - 130,882,393 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936469 10,740,601 - 11,027,067 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936469 10,735,327 - 11,027,019 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
CERS6 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 15 74,927,130 - 75,261,554 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 15 74,927,088 - 75,261,558 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 15 84,094,841 - 84,360,268 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
CERS6 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 10 53,972,795 - 54,299,721 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 10 53,972,376 - 54,294,224 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666040 145,236,257 - 145,554,226 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Cers6
.
Predicted Target Of
Count of predictions: 28 Count of miRNA genes: 26 Interacting mature miRNAs: 27 Transcripts: ENSRNOT00000058763 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
1582238 Bw68 Body weight QTL 68 3.2 0.0064 body mass (VT:0001259) body weight (CMO:0000012) 3 53184593 115665732 Rat 1582239 Epfw1 Epididymal fat weight QTL 1 4.5 0.0006 epididymal fat pad mass (VT:0010421) epididymal fat pad weight to body weight ratio (CMO:0000658) 3 53184593 115665732 Rat 2298542 Neuinf11 Neuroinflammation QTL 11 3.9 nervous system integrity trait (VT:0010566) spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126) 3 15005422 76927699 Rat 1358362 Srcrt2 Stress Responsive Cort QTL 2 2.78 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 3 38192233 133483320 Rat 737818 Hcar12 Hepatocarcinoma resistance QTL 12 2.6 liver integrity trait (VT:0010547) volume of individual liver tumorous lesion (CMO:0001078) 3 29463235 118376539 Rat 1582218 Bw74 Body weight QTL 74 3.9 0.0021 body mass (VT:0001259) body weight (CMO:0000012) 3 53184593 115665732 Rat 9590286 Uminl1 Urine mineral level QTL 1 3.5 0.001 urine mineral amount (VT:0015086) urine electrolyte level (CMO:0000593) 3 28249687 73249687 Rat 724523 Tsu1 Thymus enlargement suppressive QTL 1 3.84 thymus mass (VT:0004954) thymus weight to body weight ratio (CMO:0000612) 3 50437504 115638231 Rat 1581503 Cm58 Cardiac mass QTL 58 2.7 0.05 heart left ventricle mass (VT:0007031) heart left ventricle weight to body weight ratio (CMO:0000530) 3 43827364 121056321 Rat 2292613 Ept16 Estrogen-induced pituitary tumorigenesis QTL 16 8.3 pituitary gland mass (VT:0010496) pituitary gland wet weight (CMO:0000853) 3 47233430 110362260 Rat 731180 Bp152 Blood pressure QTL 152 0.03 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 3 53781112 91609953 Rat 61356 Bp37 Blood pressure QTL 37 3 blood pressure trait (VT:0000183) systolic blood pressure (CMO:0000004) 3 30684642 75684642 Rat 1358905 Hrtrt17 Heart rate QTL 17 5.9 0.000014 heart pumping trait (VT:2000009) heart rate (CMO:0000002) 3 10861912 89878372 Rat 8694196 Abfw2 Abdominal fat weight QTL 2 16.58 0.001 visceral adipose mass (VT:0010063) abdominal fat pad weight to body weight ratio (CMO:0000095) 3 28249687 73249687 Rat 2301971 Cm71 Cardiac mass QTL 71 4.63 heart left ventricle mass (VT:0007031) heart left ventricle weight (CMO:0000776) 3 41874578 155617519 Rat 1358885 Bp251 Blood pressure QTL 251 3.8 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 3 14489145 121056321 Rat 2301970 Bw81 Body weight QTL 81 5.19 body mass (VT:0001259) body weight (CMO:0000012) 3 41874578 155617519 Rat 1582249 Bw77 Body weight QTL 77 3.2 0.0025 epididymal fat pad mass (VT:0010421) epididymal fat pad weight to body weight ratio (CMO:0000658) 3 53184593 64655484 Rat 2290452 Scl56 Serum cholesterol level QTL 56 2.26 blood cholesterol amount (VT:0000180) plasma total cholesterol level (CMO:0000585) 3 1 91609953 Rat 12879868 Am6 Aortic mass QTL 6 0.001 aorta mass (VT:0002845) aorta weight to aorta length to body weight ratio (CMO:0002722) 3 31426403 70668733 Rat 11565451 Bw177 Body weight QTL 177 0.002 body mass (VT:0001259) body weight (CMO:0000012) 3 31426403 70668733 Rat 1358888 Bp264 Blood pressure QTL 264 4.43 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 3 14489145 121056321 Rat 11565452 Kidm57 Kidney mass QTL 57 0.001 kidney mass (VT:0002707) both kidneys wet weight to body weight ratio (CMO:0000340) 3 31426403 70668733 Rat 12879866 Cm94 Cardiac mass QTL 94 0.001 heart left ventricle mass (VT:0007031) heart left ventricle weight to body weight ratio (CMO:0000530) 3 31426403 70668733 Rat 12879867 Cm95 Cardiac mass QTL 95 0.047 heart right ventricle mass (VT:0007033) heart right ventricle weight to body weight ratio (CMO:0000914) 3 31426403 70668733 Rat 1300178 Hrtrt4 Heart rate QTL 4 3.74 heart pumping trait (VT:2000009) heart rate (CMO:0000002) 3 43827364 90905114 Rat 61377 Edpm3 Estrogen-dependent pituitary mass QTL 3 7.05 0.038 pituitary gland mass (VT:0010496) pituitary gland wet weight (CMO:0000853) 3 53184692 89878207 Rat 2302055 Pia30 Pristane induced arthritis QTL 30 3.5 0.001 blood autoantibody amount (VT:0003725) serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111) 3 27936919 72936919 Rat 1331795 Rf30 Renal function QTL 30 3.708 urine potassium amount (VT:0010539) urine potassium level (CMO:0000128) 3 39454637 89115240 Rat 70216 Cm14 Cardiac mass QTL 14 2.1 heart mass (VT:0007028) heart wet weight (CMO:0000069) 3 31172320 163586636 Rat 1354589 Bw31 Body weight QTL 31 3.3 body mass (VT:0001259) body weight (CMO:0000012) 3 33703347 78196190 Rat 2303593 Gluco46 Glucose level QTL 46 3 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 3 28468571 73468571 Rat 1354590 Despr11 Despair related QTL 11 0.000031 locomotor behavior trait (VT:0001392) amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) 3 28468571 73468571 Rat 2292591 Esta4 Estrogen-induced thymic atrophy QTL 4 thymus mass (VT:0004954) thymus wet weight (CMO:0000855) 3 47233211 147415807 Rat 1331777 Bw24 Body weight QTL 24 3.503 body mass (VT:0001259) body weight (CMO:0000012) 3 39454637 89115240 Rat 631647 Bp122 Blood pressure QTL 122 6.2 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 3 30684642 75684642 Rat 1300169 Bp177 Blood pressure QTL 177 2.96 arterial blood pressure trait (VT:2000000) blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) 3 33703347 61017857 Rat 1559282 Emca5 Estrogen-induced mammary cancer QTL 5 3.9 mammary gland integrity trait (VT:0010552) percentage of study population developing mammary tumors during a period of time (CMO:0000948) 3 43827364 169034231 Rat 2302276 Bw82 Body weight QTL 82 4.32 body mass (VT:0001259) body weight (CMO:0000012) 3 39454637 62951183 Rat 738019 Anxrr10 Anxiety related response QTL 10 3.9 exploratory behavior trait (VT:0010471) number of entries into a discrete space in an experimental apparatus (CMO:0000960) 3 38517803 83517803 Rat 9590136 Scort3 Serum corticosterone level QTL 3 23.37 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 3 28249687 73249687 Rat 10450804 Scl70 Serum cholesterol level QTL 70 4.7 0.001 blood LDL cholesterol amount (VT:0000181) blood low density lipoprotein cholesterol level (CMO:0000053) 3 20714090 65714090 Rat 61419 Cia11 Collagen induced arthritis QTL 11 5.6 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 3 30356773 98535386 Rat 1354597 Kidm13 Kidney mass QTL 13 2.9 kidney mass (VT:0002707) right kidney wet weight (CMO:0000082) 3 41874578 104104347 Rat 8552950 Pigfal12 Plasma insulin-like growth factor 1 level QTL 12 7.3 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 3 28249687 73249687 Rat 631676 Cm8 Cardiac mass QTL 8 7.03 0.0001 aorta mass (VT:0002845) aorta weight (CMO:0000076) 3 16954708 61954708 Rat 10450794 Scl69 Serum cholesterol level QTL 69 6.3 0.001 blood LDL cholesterol amount (VT:0000181) blood low density lipoprotein cholesterol level (CMO:0000053) 3 20714090 65714090 Rat 8694386 Bw159 Body weight QTL 159 4.52 0.001 body lean mass (VT:0010483) lean tissue morphological measurement (CMO:0002184) 3 28249687 73249687 Rat 1354604 Bw36 Body weight QTL 36 2.9 body mass (VT:0001259) body weight (CMO:0000012) 3 33703347 104104347 Rat 631665 Bw8 Body weight QTL 8 5.5 body mass (VT:0001259) body weight (CMO:0000012) 3 50437042 119183768 Rat 2301400 Cm68 Cardiac mass QTL 68 0.001 heart mass (VT:0007028) heart wet weight to body weight ratio (CMO:0002408) 3 31426403 70668733 Rat 1358186 Ept2 Estrogen-induced pituitary tumorigenesis QTL 2 8.3 pituitary gland mass (VT:0010496) pituitary gland wet weight (CMO:0000853) 3 47233430 110362260 Rat
D3Rat75
Rat Assembly Chr Position (strand) Source JBrowse GRCr8 3 74,222,699 - 74,222,903 (+) Marker Load Pipeline mRatBN7.2 3 53,814,841 - 53,815,045 (+) MAPPER mRatBN7.2 Rnor_6.0 3 55,278,824 - 55,279,027 NCBI Rnor6.0 Rnor_5.0 3 61,890,756 - 61,890,959 UniSTS Rnor5.0 RGSC_v3.4 3 51,195,217 - 51,195,421 RGD RGSC3.4 RGSC_v3.4 3 51,195,218 - 51,195,421 UniSTS RGSC3.4 RGSC_v3.1 3 51,091,590 - 51,091,793 RGD Celera 3 53,377,734 - 53,377,917 UniSTS RH 3.4 Map 4 528.12 UniSTS RH 3.4 Map 4 528.12 RGD SHRSP x BN Map 3 36.0899 UniSTS SHRSP x BN Map 3 36.0899 RGD FHH x ACI Map 3 39.47 RGD Cytogenetic Map 3 q21 UniSTS
D3Chm63
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 3 53,781,112 - 53,781,346 (+) MAPPER mRatBN7.2 Rnor_6.0 3 55,245,276 - 55,245,509 NCBI Rnor6.0 Rnor_5.0 3 61,857,234 - 61,857,467 UniSTS Rnor5.0 RGSC_v3.4 3 51,161,661 - 51,161,895 RGD RGSC3.4 RGSC_v3.4 3 51,161,662 - 51,161,895 UniSTS RGSC3.4 Celera 3 53,344,358 - 53,344,591 UniSTS Cytogenetic Map 3 q21 UniSTS
RH132016
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 3 53,632,717 - 53,632,908 (+) MAPPER mRatBN7.2 Rnor_6.0 3 55,096,345 - 55,096,535 NCBI Rnor6.0 Rnor_5.0 3 61,710,185 - 61,710,375 UniSTS Rnor5.0 RGSC_v3.4 3 50,981,133 - 50,981,323 UniSTS RGSC3.4 Celera 3 53,196,396 - 53,196,586 UniSTS Cytogenetic Map 3 q21 UniSTS
BE106939
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 3 53,855,527 - 53,855,726 (+) MAPPER mRatBN7.2 Rnor_6.0 3 55,318,627 - 55,318,825 NCBI Rnor6.0 Rnor_5.0 3 61,930,559 - 61,930,757 UniSTS Rnor5.0 RGSC_v3.4 3 51,237,259 - 51,237,457 UniSTS RGSC3.4 Celera 3 53,418,422 - 53,418,620 UniSTS RH 3.4 Map 4 402.04 UniSTS Cytogenetic Map 3 q21 UniSTS
AU049900
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 3 53,814,084 - 53,814,330 (+) MAPPER mRatBN7.2 Rnor_6.0 3 55,278,067 - 55,278,312 NCBI Rnor6.0 Rnor_5.0 3 61,889,999 - 61,890,244 UniSTS Rnor5.0 RGSC_v3.4 3 51,194,461 - 51,194,706 UniSTS RGSC3.4 Celera 3 53,376,977 - 53,377,222 UniSTS Cytogenetic Map 3 q21 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000058763 ⟹ ENSRNOP00000055558
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 3 53,630,959 - 53,874,822 (+) Ensembl Rnor_6.0 Ensembl 3 55,094,637 - 55,338,445 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000105502 ⟹ ENSRNOP00000078641
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 3 53,630,959 - 53,874,822 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000111194 ⟹ ENSRNOP00000088922
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 3 53,631,007 - 53,876,848 (+) Ensembl
RefSeq Acc Id:
NM_001399362 ⟹ NP_001386291
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 3 74,038,861 - 74,287,544 (+) NCBI mRatBN7.2 3 53,630,977 - 53,879,692 (+) NCBI
RefSeq Acc Id:
NM_001399363 ⟹ NP_001386292
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 3 74,038,861 - 74,287,544 (+) NCBI mRatBN7.2 3 53,630,977 - 53,879,692 (+) NCBI
RefSeq Acc Id:
XM_039106361 ⟹ XP_038962289
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 3 74,038,520 - 74,259,005 (+) NCBI mRatBN7.2 3 53,630,637 - 53,836,221 (+) NCBI
RefSeq Acc Id:
XM_063284272 ⟹ XP_063140342
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 3 74,212,154 - 74,287,542 (+) NCBI
Ensembl Acc Id:
ENSRNOP00000055558 ⟸ ENSRNOT00000058763
RefSeq Acc Id:
XP_038962289 ⟸ XM_039106361
- Peptide Label:
isoform X1
Ensembl Acc Id:
ENSRNOP00000088922 ⟸ ENSRNOT00000111194
Ensembl Acc Id:
ENSRNOP00000078641 ⟸ ENSRNOT00000105502
RefSeq Acc Id:
NP_001386291 ⟸ NM_001399362
- Peptide Label:
isoform 1
- UniProtKB:
F1LTP8 (UniProtKB/TrEMBL), A0A8I5ZL71 (UniProtKB/TrEMBL)
RefSeq Acc Id:
NP_001386292 ⟸ NM_001399363
- Peptide Label:
isoform 2
- UniProtKB:
A0A8I6A742 (UniProtKB/TrEMBL), A6HLZ6 (UniProtKB/TrEMBL), A0A8I5ZL71 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_063140342 ⟸ XM_063284272
- Peptide Label:
isoform X2
RGD ID: 13692119 Promoter ID: EPDNEW_R2634 Type: initiation region Name: Cers6_1 Description: ceramide synthase 6 SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Experiment Methods: Single-end sequencing. Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 3 55,094,623 - 55,094,683 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2011-08-02
Cers6
ceramide synthase 6
Lass6
LAG1 homolog, ceramide synthase 6
Nomenclature updated to reflect human and mouse nomenclature
1299863 APPROVED
2008-02-29
Lass6
LAG1 homolog, ceramide synthase 6
RGD1561599_predicted
similar to longevity assurance homolog 6 (predicted)
Nomenclature updated to reflect human and mouse nomenclature
1299863 APPROVED
2006-03-07
RGD1561599_predicted
similar to longevity assurance homolog 6 (predicted)
LOC366065
similar to longevity assurance homolog 6
Symbol and Name status set to approved
1299863 APPROVED
2006-02-09
LOC366065
similar to longevity assurance homolog 6
Symbol and Name status set to provisional
70820 PROVISIONAL
