Dmkn (dermokine) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Dmkn (dermokine) Rattus norvegicus
Analyze
Symbol: Dmkn
Name: dermokine
RGD ID: 1561521
Description: Predicted to be involved in cornified envelope assembly. Predicted to be active in extracellular space. Orthologous to human DMKN (dermokine); INTERACTS WITH 6-propyl-2-thiouracil; acrylamide; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: dermokine-like; LOC100912070; LOC361548; RGD1561521; similar to 1110014F24Rik protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8195,140,737 - 95,158,676 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl195,141,620 - 95,157,439 (+)EnsemblGRCr8
mRatBN7.2186,013,237 - 86,031,243 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl186,014,188 - 86,030,006 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx191,429,795 - 91,446,813 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0199,895,970 - 99,912,983 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0193,188,092 - 93,205,104 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0189,215,266 - 89,229,696 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl189,215,266 - 89,229,696 (+)Ensemblrn6Rnor6.0
Rnor_5.0190,369,376 - 90,386,137 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4185,811,409 - 85,828,800 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera180,385,576 - 80,402,667 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2,6-dimethoxyphenol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP,ISO)
acrylamide  (EXP)
aflatoxin B1  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-lapachone  (ISO)
bilirubin IXalpha  (ISO)
bisphenol A  (EXP,ISO)
butanal  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chloroprene  (ISO)
chromium(6+)  (ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
Dibutyl phosphate  (ISO)
diiodine  (ISO)
dorsomorphin  (ISO)
ethyl methanesulfonate  (ISO)
folic acid  (ISO)
fulvestrant  (ISO)
furfural  (ISO)
genistein  (ISO)
gentamycin  (EXP)
indometacin  (ISO)
lipopolysaccharide  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (EXP,ISO)
methamphetamine  (EXP)
methyl methanesulfonate  (ISO)
N,N-diethyl-m-toluamide  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
pentanal  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
permethrin  (EXP)
pirinixic acid  (ISO)
propanal  (ISO)
resveratrol  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
SCH 23390  (EXP)
silicon dioxide  (EXP,ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium chloride  (ISO)
sotorasib  (ISO)
sulforaphane  (ISO)
titanium dioxide  (ISO)
trametinib  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:15256262   PMID:23376485   PMID:24794495  


Genomics

Comparative Map Data
Dmkn
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8195,140,737 - 95,158,676 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl195,141,620 - 95,157,439 (+)EnsemblGRCr8
mRatBN7.2186,013,237 - 86,031,243 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl186,014,188 - 86,030,006 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx191,429,795 - 91,446,813 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0199,895,970 - 99,912,983 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0193,188,092 - 93,205,104 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0189,215,266 - 89,229,696 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl189,215,266 - 89,229,696 (+)Ensemblrn6Rnor6.0
Rnor_5.0190,369,376 - 90,386,137 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4185,811,409 - 85,828,800 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera180,385,576 - 80,402,667 (+)NCBICelera
Cytogenetic Map1q21NCBI
DMKN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381935,497,220 - 35,513,649 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1935,497,220 - 35,513,693 (-)Ensemblhg38GRCh38
GRCh371935,988,122 - 36,004,551 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361940,679,962 - 40,696,394 (-)NCBIBuild 36Build 36hg18NCBI36
Celera1932,701,640 - 32,718,078 (-)NCBICelera
Cytogenetic Map19q13.12NCBI
HuRef1932,493,638 - 32,510,025 (-)NCBIHuRef
CHM1_11935,989,744 - 36,006,129 (-)NCBICHM1_1
T2T-CHM13v2.01938,041,938 - 38,058,366 (-)NCBIT2T-CHM13v2.0
Dmkn
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39730,463,181 - 30,480,491 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl730,463,181 - 30,480,488 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38730,763,756 - 30,781,066 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl730,763,756 - 30,781,063 (+)Ensemblmm10GRCm38
MGSCv37731,548,775 - 31,566,085 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36730,472,523 - 30,489,818 (+)NCBIMGSCv36mm8
Celera725,346,863 - 25,363,866 (+)NCBICelera
Cytogenetic Map7B1NCBI
cM Map719.24NCBI
Dmkn
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554684,725,562 - 4,738,358 (-)Ensembl
ChiLan1.0NW_0049554684,724,652 - 4,738,556 (-)NCBIChiLan1.0ChiLan1.0
DMKN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22041,510,116 - 41,527,419 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11943,493,479 - 43,509,945 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01932,443,920 - 32,460,473 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11941,180,079 - 41,196,614 (-)NCBIPanPan1.1PanPan1.1panPan2
DMKN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11117,144,605 - 117,158,116 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1117,144,627 - 117,158,027 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1116,547,466 - 116,560,976 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01117,744,222 - 117,757,759 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1117,744,103 - 117,758,642 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11117,307,613 - 117,321,100 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01116,932,917 - 116,946,418 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01117,988,259 - 118,001,792 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Dmkn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934910,786,136 - 10,799,794 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936570846,146 - 859,759 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936570846,229 - 859,732 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DMKN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl644,942,782 - 44,955,105 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1644,942,067 - 44,957,192 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2640,228,367 - 40,243,498 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DMKN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1630,422,404 - 30,440,481 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl630,423,901 - 30,438,808 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660738,214,789 - 8,231,458 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dmkn
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247948,087,442 - 8,100,802 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Dmkn
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v12165,236,045 - 165,252,000 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Dmkn
44 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:50
Count of miRNA genes:49
Interacting mature miRNAs:50
Transcripts:ENSRNOT00000040607
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)151940904101229020Rat
1582234Gluco18Glucose level QTL 183.40.0003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)187889942132889942Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)139728272132889942Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)151941022208479811Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)151940904168768703Rat
2300324Fetw1Fetal weight QTL 112.10.005fetal growth trait (VT:0004201)fetal body weight (CMO:0002080)192963855109494029Rat
1331800Scl25Serum cholesterol level QTL 253.013blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)187785026142582336Rat
7421628Bp361Blood pressure QTL 3610.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183019780128019780Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)166404680111404680Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134184556172281316Rat
631512Scl6Serum cholesterol level QTL 69.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)18126986099645535Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)166009857160501508Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134565911208798288Rat
631519Pia11Pristane induced arthritis QTL 115.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)193903998191260518Rat
1302788Scl19Serum cholesterol QTL 194.60.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)166400974132889942Rat
1549903Bp267Blood pressure QTL 267arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)184107164115183752Rat
2313083Bmd74Bone mineral density QTL 7440.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)191302413136302413Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)151511344153680016Rat
61342Bp27Blood pressure QTL 273.40.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16540563796805205Rat
1358192Ept13Estrogen-induced pituitary tumorigenesis QTL 133.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)186622262131622262Rat
6903308Scl36Serum cholesterol QTL 3620.0125blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)158769992103769992Rat
2300164Bmd44Bone mineral density QTL 445.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)166077886111077886Rat
738022Anxrr13Anxiety related response QTL 134.60.00039locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of, or within a discrete space in an open field apparatus (CMO:0001514)192683681137683681Rat
152025249Scl82Serum cholesterol level QTL 824.77blood cholesterol amount (VT:0000180)152891222109116986Rat
10054135Gmadr2Adrenal mass QTL 21.970.0129adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)186993904131993904Rat
7411712Strs4Sensitivity to stroke QTL 48.7cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)187558587132558587Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)192683681137683681Rat

Markers in Region
D1Got87  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2186,030,510 - 86,030,749 (+)MAPPERmRatBN7.2
Rnor_6.0191,156,565 - 91,156,803NCBIRnor6.0
Rnor_6.0189,228,970 - 89,229,208NCBIRnor6.0
Rnor_5.0192,291,247 - 92,291,485UniSTSRnor5.0
Rnor_5.0190,385,411 - 90,385,649UniSTSRnor5.0
RGSC_v3.4185,828,068 - 85,828,306UniSTSRGSC3.4
RGSC_v3.4185,828,067 - 85,828,306RGDRGSC3.4
Celera180,401,941 - 80,402,179UniSTS
RGSC_v3.1185,906,179 - 85,906,417RGD
RH 3.4 Map1844.0RGD
RH 3.4 Map1844.0UniSTS
RH 2.0 Map1559.7RGD
Cytogenetic Map1q21UniSTS
RH130107  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2186,030,949 - 86,031,169 (+)MAPPERmRatBN7.2
Rnor_6.0191,157,004 - 91,157,223NCBIRnor6.0
Rnor_6.0189,229,409 - 89,229,628NCBIRnor6.0
Rnor_5.0192,291,686 - 92,291,905UniSTSRnor5.0
Rnor_5.0190,385,850 - 90,386,069UniSTSRnor5.0
RGSC_v3.4185,828,507 - 85,828,726UniSTSRGSC3.4
Celera180,402,380 - 80,402,599UniSTS
RH 3.4 Map1844.0UniSTS
Cytogenetic Map1q21UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 1 50 129 55 54 25 56 25 6 207 133 9 107 32 78 29 8 8

Sequence


Ensembl Acc Id: ENSRNOT00000073438   ⟹   ENSRNOP00000066127
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl191,152,635 - 91,156,060 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000084799   ⟹   ENSRNOP00000072810
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl195,141,620 - 95,157,439 (+)Ensembl
mRatBN7.2 Ensembl186,014,188 - 86,030,006 (+)Ensembl
Rnor_6.0 Ensembl189,215,382 - 89,228,465 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000093144   ⟹   ENSRNOP00000076204
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl195,141,620 - 95,157,003 (+)Ensembl
mRatBN7.2 Ensembl186,014,188 - 86,029,280 (+)Ensembl
Rnor_6.0 Ensembl189,220,083 - 89,229,696 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000093612   ⟹   ENSRNOP00000076175
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl195,141,620 - 95,157,439 (+)Ensembl
mRatBN7.2 Ensembl186,014,188 - 86,030,006 (+)Ensembl
Rnor_6.0 Ensembl189,215,266 - 89,217,859 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000151719   ⟹   ENSRNOP00000102409
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl195,153,988 - 95,157,439 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000153874   ⟹   ENSRNOP00000101693
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl195,141,620 - 95,157,003 (+)Ensembl
RefSeq Acc Id: NM_001173357   ⟹   NP_001166828
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8195,141,620 - 95,158,670 (+)NCBI
mRatBN7.2186,014,188 - 86,031,237 (+)NCBI
Rnor_6.0189,215,266 - 89,229,696 (+)NCBI
Rnor_5.0190,369,376 - 90,386,137 (+)NCBI
Celera180,385,576 - 80,402,667 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039081975   ⟹   XP_038937903
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8195,140,740 - 95,158,676 (+)NCBI
mRatBN7.2186,013,240 - 86,031,243 (+)NCBI
RefSeq Acc Id: XM_039081986   ⟹   XP_038937914
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8195,153,728 - 95,158,676 (+)NCBI
mRatBN7.2186,026,296 - 86,031,243 (+)NCBI
RefSeq Acc Id: XM_063266496   ⟹   XP_063122566
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8195,140,737 - 95,158,676 (+)NCBI
RefSeq Acc Id: XM_063266497   ⟹   XP_063122567
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8195,140,738 - 95,158,676 (+)NCBI
RefSeq Acc Id: XM_063266498   ⟹   XP_063122568
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8195,153,725 - 95,158,676 (+)NCBI
RefSeq Acc Id: NP_001166828   ⟸   NM_001173357
- Peptide Label: precursor
- UniProtKB: B2RYK9 (UniProtKB/TrEMBL),   A0A1W2Q687 (UniProtKB/TrEMBL),   A6JA22 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000072810   ⟸   ENSRNOT00000084799
Ensembl Acc Id: ENSRNOP00000076175   ⟸   ENSRNOT00000093612
Ensembl Acc Id: ENSRNOP00000076204   ⟸   ENSRNOT00000093144
RefSeq Acc Id: XP_038937903   ⟸   XM_039081975
- Peptide Label: isoform X2
- UniProtKB: A0A0G2K3X0 (UniProtKB/TrEMBL),   A6JA22 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038937914   ⟸   XM_039081986
- Peptide Label: isoform X3
- UniProtKB: A6JA23 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000066127   ⟸   ENSRNOT00000073438
RefSeq Acc Id: XP_063122566   ⟸   XM_063266496
- Peptide Label: isoform X1
- UniProtKB: A6JA22 (UniProtKB/TrEMBL),   A0A1W2Q687 (UniProtKB/TrEMBL),   B2RYK9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063122567   ⟸   XM_063266497
- Peptide Label: isoform X2
- UniProtKB: A6JA22 (UniProtKB/TrEMBL),   A0A0G2K3X0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063122568   ⟸   XM_063266498
- Peptide Label: isoform X3
- UniProtKB: A6JA23 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000102409   ⟸   ENSRNOT00000151719
Ensembl Acc Id: ENSRNOP00000101693   ⟸   ENSRNOT00000153874

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-M0R9F9-F1-model_v2 AlphaFold M0R9F9 1-105 view protein structure
AF-A0A0G2K3X0-F1-model_v2 AlphaFold A0A0G2K3X0 1-517 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13689938
Promoter ID:EPDNEW_R457
Type:single initiation site
Name:Dmkn_1
Description:dermokine
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0189,215,227 - 89,215,287EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1561521 AgrOrtholog
BioCyc Gene G2FUF-60078 BioCyc
Ensembl Genes ENSRNOG00000048407 Ensembl
  ENSRNOG00000055934 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000084799.3 UniProtKB/TrEMBL
  ENSRNOT00000093144.3 UniProtKB/TrEMBL
  ENSRNOT00000093612 ENTREZGENE
  ENSRNOT00000093612.3 UniProtKB/TrEMBL
  ENSRNOT00000151719 ENTREZGENE
  ENSRNOT00000151719.1 UniProtKB/TrEMBL
  ENSRNOT00000153874.1 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7462729 IMAGE-MGC_LOAD
InterPro Dermokine UniProtKB/TrEMBL
KEGG Report rno:361548 UniProtKB/TrEMBL
MGC_CLONE MGC:188672 IMAGE-MGC_LOAD
NCBI Gene 361548 ENTREZGENE
PANTHER DERMOKINE UniProtKB/TrEMBL
  PTHR36881 UniProtKB/TrEMBL
PhenoGen Dmkn PhenoGen
RatGTEx ENSRNOG00000048407 RatGTEx
  ENSRNOG00000055934 RatGTEx
UniProt A0A0G2K3X0 ENTREZGENE, UniProtKB/TrEMBL
  A0A1W2Q687 ENTREZGENE
  A0A1W2Q6C1_RAT UniProtKB/TrEMBL
  A0ABK0LAG7_RAT UniProtKB/TrEMBL
  A0ABK0LE78_RAT UniProtKB/TrEMBL
  A6JA22 ENTREZGENE, UniProtKB/TrEMBL
  A6JA23 ENTREZGENE, UniProtKB/TrEMBL
  B2RYK9 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A1W2Q687 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Dmkn  dermokine  LOC100912070  dermokine-like  Data merged from RGD:6488970 737654 PROVISIONAL
2012-07-05 LOC100912070  dermokine-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-02-29 Dmkn  dermokine  RGD1561521_predicted  similar to 1110014F24Rik protein (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1561521_predicted  similar to 1110014F24Rik protein (predicted)  LOC361548  similar to 1110014F24Rik protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC361548  similar to 1110014F24Rik protein      Symbol and Name status set to provisional 70820 PROVISIONAL