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Gene: Slitrk2 (SLIT and NTRK-like family, member 2) Rattus norvegicus

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Symbol:

Slitrk2

Name:

SLIT and NTRK-like family, member 2

RGD ID:

1561361

Description:

Predicted to be involved in axonogenesis; regulation of synapse assembly; and synaptic membrane adhesion. Is active in postsynaptic membrane. Human ortholog(s) of this gene implicated in non-syndromic X-linked intellectual developmental disorder 111. Orthologous to human SLITRK2 (SLIT and NTRK like family member 2); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; acrylamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC309349; RGD1561361; similar to neuronal transmembrane protein Slitrk2; SLIT and NTRK-like protein 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLITRK2 (SLIT and NTRK like family member 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther
Mus musculus (house mouse):	Slitrk2 (SLIT and NTRK-like family, member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Slitrk2 (SLIT and NTRK like family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLITRK2 (SLIT and NTRK like family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SLITRK2 (SLIT and NTRK like family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slitrk2 (SLIT and NTRK like family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLITRK2 (SLIT and NTRK like family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SLITRK2 (SLIT and NTRK like family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slitrk2 (SLIT and NTRK like family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	SLITRK2 (SLIT and NTRK like family member 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Slitrk2 (SLIT and NTRK-like family, member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slitrk2 (SLIT and NTRK-like family, member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	cetn3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	slitrk2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	150,287,418 - 150,299,832 (+)	NCBI		GRCr8
mRatBN7.2	X	145,246,448 - 145,259,983 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	145,246,460 - 145,271,220 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	147,450,931 - 147,454,371 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	150,975,813 - 150,979,253 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	148,525,830 - 148,529,270 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	151,099,388 - 151,111,816 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	151,103,576 - 151,107,016 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	151,095,085 - 151,108,778 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	152,668,556 - 152,671,996 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	141,105,289 - 141,108,729 (+)	NCBI		Celera
Cytogenetic Map	X	q37	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

autosomal hemophilia A (ISO)

factor VIII deficiency (ISO)

intellectual disability (ISO)

non-syndromic X-linked intellectual developmental disorder 111 (ISO,ISS)

syndromic X-linked intellectual disability Lubs type (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17alpha-ethynylestradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

3,3',5,5'-tetrabromobisphenol A (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

acrylamide (EXP)

all-trans-retinoic acid (ISO)

alpha-Zearalanol (EXP)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

CGP 52608 (ISO)

chromium(6+) (ISO)

copper(II) sulfate (ISO)

Cuprizon (EXP)

endosulfan (EXP)

folic acid (ISO)

gemcitabine (ISO)

glycidol (EXP)

lead(0) (ISO)

mono(2-ethylhexyl) phthalate (ISO)

nitrofen (EXP)

paracetamol (ISO)

perfluorooctanoic acid (EXP)

sodium arsenite (ISO)

trichloroethene (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

axonogenesis (IBA,ISO)

positive regulation of synapse assembly (IBA,ISO)

regulation of presynapse assembly (ISO)

regulation of synapse organization (ISO)

synaptic membrane adhesion (ISO)

Cellular Component

dendrite (ISO)

GABA-ergic synapse (ISO)

glutamatergic synapse (IBA,ISO)

plasma membrane (ISO)

postsynaptic membrane (IDA,IEP)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
4.	Slitrks control excitatory and inhibitory synapse formation with LAR receptor protein tyrosine phosphatases.	Yim YS, etal., Proc Natl Acad Sci U S A. 2013 Mar 5;110(10):4057-62. doi: 10.1073/pnas.1209881110. Epub 2013 Jan 23.

Additional References at PubMed

PMID:14550773	PMID:24613359	PMID:25989451	PMID:27273464	PMID:31745231

Genomics

Comparative Map Data

Slitrk2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	150,287,418 - 150,299,832 (+)	NCBI		GRCr8
mRatBN7.2	X	145,246,448 - 145,259,983 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	145,246,460 - 145,271,220 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	147,450,931 - 147,454,371 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	150,975,813 - 150,979,253 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	148,525,830 - 148,529,270 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	151,099,388 - 151,111,816 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	151,103,576 - 151,107,016 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	151,095,085 - 151,108,778 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	152,668,556 - 152,671,996 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	141,105,289 - 141,108,729 (+)	NCBI		Celera
Cytogenetic Map	X	q37	NCBI

SLITRK2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	145,817,829 - 145,829,856 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	145,817,829 - 145,829,856 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	144,899,347 - 144,911,374 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	144,707,042 - 144,715,052 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	144,604,895 - 144,612,904	NCBI
Celera	X	145,211,704 - 145,219,715 (+)	NCBI		Celera
Cytogenetic Map	X	q27.3	NCBI
HuRef	X	133,868,009 - 133,873,011 (+)	NCBI		HuRef
CHM1_1	X	144,810,593 - 144,818,604 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	144,074,860 - 144,086,894 (+)	NCBI		T2T-CHM13v2.0

Slitrk2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	65,692,535 - 65,705,008 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	65,692,924 - 65,704,999 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	66,648,951 - 66,661,402 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	66,649,318 - 66,661,393 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	63,902,493 - 63,914,577 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	62,913,672 - 62,917,110 (+)	NCBI		MGSCv36	mm8
Celera	X	55,108,474 - 55,120,526 (-)	NCBI		Celera
Cytogenetic Map	X	A7.1	NCBI
cM Map	X	34.81	NCBI

Slitrk2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955585	479,798 - 486,363 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955585	479,798 - 488,046 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLITRK2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	145,142,571 - 145,154,591 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	145,146,178 - 145,158,193 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	134,853,269 - 134,865,281 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	145,230,940 - 145,238,949 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	145,235,542 - 145,238,079 (+)	Ensembl	panpan1.1		panPan2

SLITRK2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	114,576,526 - 114,584,471 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	114,581,070 - 114,583,607 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	100,438,007 - 100,445,960 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	116,597,295 - 116,605,248 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	116,597,210 - 116,609,305 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	113,722,487 - 113,730,439 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	115,929,087 - 115,937,038 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	115,659,264 - 115,667,220 (+)	NCBI		UU_Cfam_GSD_1.0

Slitrk2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	112,644,721 - 112,656,767 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936513	2,961,983 - 2,966,439 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936513	2,961,842 - 2,969,938 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLITRK2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	118,830,086 - 118,834,307 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	118,826,531 - 118,837,134 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	136,058,440 - 136,066,217 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLITRK2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	120,640,216 - 120,649,434 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	120,646,022 - 120,648,559 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666065	58,182,578 - 58,192,619 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slitrk2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624808	1,311,247 - 1,319,087 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624808	1,307,229 - 1,319,063 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Slitrk2
17 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	50
Count of miRNA genes:	43
Interacting mature miRNAs:	48
Transcripts:	ENSRNOT00000015401
Prediction methods:	Miranda, Pita, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1598856	Memor1	Memory QTL 1	1.9		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	X	103312877	148312877	Rat
1598809	Memor15	Memory QTL 15	4.4		exploratory behavior trait (VT:0010471)	difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	X	103312877	148312877	Rat
738025	Stresp3	Stress response QTL 3	4.61	0.0066	stress-related behavior trait (VT:0010451)	defensive burying - approach	X	100567703	150256146	Rat
634346	Insul4	Insulin level QTL 4	0		blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	X	126975089	152453651	Rat
10059603	Bw174	Body weight QTL 174	3.4	0.025	body mass (VT:0001259)	body weight (CMO:0000012)	X	113937816	152453651	Rat
1598837	Memor13	Memory QTL 13	3.2		exploratory behavior trait (VT:0010471)	difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	X	41052407	146860749	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	9	46	113	59	56	28	21	28	6	168	88	93	35	53	28

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107587	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257625	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773586	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000015401 ⟹ ENSRNOP00000015401

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	145,250,189 - 145,253,629 (+)	Ensembl
Rnor_6.0 Ensembl	X	151,103,576 - 151,107,016 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000094061 ⟹ ENSRNOP00000077976

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	145,246,460 - 145,271,220 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000108501 ⟹ ENSRNOP00000088481

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	145,246,460 - 145,259,029 (+)	Ensembl

RefSeq Acc Id:

NM_001107587 ⟹ NP_001101057

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	150,291,591 - 150,295,031 (+)	NCBI
mRatBN7.2	X	145,250,189 - 145,253,629 (+)	NCBI
Rnor_6.0	X	151,103,576 - 151,107,016 (+)	NCBI
Rnor_5.0	X	151,095,085 - 151,108,778 (+)	NCBI
RGSC_v3.4	X	152,668,556 - 152,671,996 (+)	RGD
Celera	X	141,105,289 - 141,108,729 (+)	RGD

Sequence:

show sequence

CAAATTCAAACTGCTAGACGCACTGCTGCTGCTGCCACTGGATTGAAAGCGCGCGCCCAGGCTC
CGCTGTGGCAACCGCCCGCAGTGACCCAGTCCGAAAAACCTTCCAATGCAATCTCACCCCTGGC
TCCCCGCAGCGCAGCTTCTTTCTGTTCCAATCCTCCTCTTCCTCTCTGGCCGCCAGCCGGATTT
CTAATTTCTGCGCGCCCCACCCCCCGCCCAATCAAATTAAATCAAGAAACAAAAAGCAGAGCAT
CCCCCACTGCAAGCGGCATCTTCCTTTACTTTGCTCTCCTTCTCTTCCCGAAGATGCTAAACTA
CTGGTGGACTGAAGAAGAGAAGAGCCCGGTCTCCTCCTGATGTGTTTGCCTGTAAGTACCGGAG
CTGACATCGAAGGTGCTTAAAAATGCTGAGCGGCGTCTGGTTCCTCAGTGTGTTCACAGTGGCC
GGGATCTTACAGATCGAGAGTCGCAAAACTGCCAAAGACATTTGCAAGATCCGCTGTTTGTGCG
AAGAGAAGGAAAACGTACTGAACATTAACTGTGAAAACAAAGGATTTACAACTGTCAGTTTGCT
TCAACCCCCCCAGTATCGCATCTATCAGCTGTTTCTGAACGGAAACCTCTTGACCAGACTGTAT
CCAAATGAGTTTGTTAATTACTCAAATGCGGTGACTCTACATCTAGGTAACAATGGGTTGCAGG
AGATCCGACCTGGGGCATTTAGCGGTCTGAAAACTCTCAAGAGACTGCACCTCAACAACAACAA
ACTGGAGGTATTGCGAGAGGACACTTTTCTAGGCCTAGAGAGTCTGGAGTACCTCCAAGCTGAC
TACAATTACATCAGCACCATCGAGGCAGGGGCATTCAGCAAACTGAATAAGCTCAAAGTACTCA
TCTTGAATGACAACCTTTTGCTGTCTCTGCCTAGTAATGTATTTCGGTTCGTCCTGCTGACTCA
TTTAGACCTGAGGGGGAACAGGTTGAAAGTAATGCCTTTTGCTGGTGTCCTTGAACATATTGGA
GGAATCATGGAAATTCAGCTGGAAGAAAACCCATGGAATTGCACCTGTGACTTACTTCCTCTCA
AGGCATGGCTGGACACCATTACTGTTTTTGTAGGGGAGATTGTCTGTGAAACTCCTTTCAGGTT
ACATGGGAAAGATGTGACCCAGCTGACCAGACAAGACCTCTGTCCCAGAAAAAGTGCAAGTGGT
GATTCTAGTCAGAGGAGCAGCCATTCAGACACACATGTCCAAAGGCTGTCCCCTACAATGAATC
CTGCTCTCAACCCAACCAGGGCTCCAAAAGCCAGCCGGCCACCCAAAATGAGAAATCGTCCAAC
TCCCCGAGTGACTGTGTCAAAAGACCGGCAGAGCTTTGGCCCAATCATGGTGTACCAGACCAAG
TCCCCCGTGGCCCTCACCTGTCCCAGCAGCTGTGTCTGTACCTCTCAGAGCTCAGACAATGGTC
TAAATGTTAACTGCCAAGAAAGGAAGTTCACTAACATCTCTGACCTACAGCCCAAACCTACCAG
TCCAAAGAAACTCTACCTGACAGGGAACTATCTCCAAACAGTCTATAAGAATGACCTCTTAGAA
TACACTTCACTGGATTTGTTGCATTTAGGAAACAACAGGATTGCAGTCATCCAAGAAGGTGCCT
TTACAAACCTGACCAGTTTACGAAGACTTTATCTAAATGGCAATTACCTTGAAGTGCTGTATCC
TTCTATGTTTGATGGACTGCAGAGCTTGCAGTATCTCTATTTAGAGTATAATGTCATTAAGGAA
ATTAAGCCTCTGACCTTTGATGCTTTGATTAACCTCCAGCTCCTGTTTCTGAATAACAACCTGC
TGAGGTCCTTACCTGATAATATATTTGGGGGCACAGCCCTCACCAGGCTGAATCTGAGGAACAA
TCATTTTTCTCACCTGCCTGTGAAAGGGGTCCTGGACCAGCTTCCTGCTTTTATCCAGATAGAT
CTGCAAGAGAACCCATGGGACTGCACCTGTGACATCATGGGGCTTAAGGACTGGACCGAACATG
CCAATTCTCCTGTCATCATCAATGAGGTGACTTGTGAATCTCCCGCTAAGCATGCAGGGGAGAT
ACTGAAATTCCTGGGAAGGGAGGCTATTTGCCCAGATAATCCTAACCTGTCAGATGGGACTGTT
TTATCAATGAATCACAACACAGACACACCTAGATCACTTAGTGTGTCTCCTAGTTCTTACCCCG
AACTACACACTGAAGTTCCACTCTCCGTCTTAATTTTAGGATTGCTTGTGGTTTTTATCCTGTC
TGTCTGTTTTGGGGCGGGGTTGTTCGTCTTTGTCCTGAAGCGTCGAAAGGGAGTGCCAAGTGTT
CCCAGGAGTGCCACCAACTTAGATGTAAGTTCCTTCCAGTTACAATATGGGTCTTACAACACCG
AAACTAATGATAAAACTGATGGCCACGTCTATAACTACATTCCCCCACCTGTGGGTCAGATGTG
CCAAAACCCCATCTACATGCAGAAGGAAGGAGACCCAGTAGCCTATTACCGAAACCTTCAGGAT
TTCAGCTATGGCAACCTGGAGGAAAAAAAAGAAGAACCTGCCACACTTGCTTACACAATAAGTG
CCACTGAGTTGCTAGAAAAACAGGCCACACCAAAAGAGCCTGAGCTGCTGTATCAGAATATCGC
TGAGCGAGCTAAGGAACTTCCCAGTGCAGGCCTAGTCCACTATAACTTTTGTACCTTACCTAAA
AGGCAGTTTGCCCCTTCATATGAATCTCGACGCCAAAACCAAGACAGAATCAATAAAACCGTTT
TATATGGGACTCCCAGAAAATGCTTTGTGGGGCAGTCAAAGCCAGACCACCCTTTACTGCAAGC
TAAGCCGCAATCTGAACCAGACTACCTCGAAGTTCTGGAAAAACAAACTGCAATCAGTCAGCTG
TGA

hide sequence

RefSeq Acc Id:

XM_006257626 ⟹ XP_006257688

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	150,287,418 - 150,299,832 (+)	NCBI
mRatBN7.2	X	145,246,448 - 145,259,983 (+)	NCBI
Rnor_6.0	X	151,099,388 - 151,111,816 (+)	NCBI
Rnor_5.0	X	151,095,085 - 151,108,778 (+)	NCBI

Sequence:

show sequence

TACAGGAATGTATCCAACTCAGATTGCTGACTGCTTTTTCACTTGTCCGTAACTTCCACCCAGG
GGATCTTAGGGTCCCCTCAGATATGATATCAAGCAAGTGTCATCCTTATTTCACTTGACCTAGT
CTGACGGGTAGCACATGGTAGAAGCTGCAAGAGCTGGGCAGAGTTCCAGTAAAGAGGGGCTGAC
AGGCAAAAGCAGTGCTCTGCAACGCTTGTCAGACAGAGAACTAGAGCAGCGGCTCCTTTGTGGG
CTGGTACATCCCCATCCGGAGTGCACAGCAGGGATATTTGATCTGCAGGGTGATTGATAAGTGC
TGGAGAGGGGCAGCCATCCTTCCCTCCCTCCCTCCCTCTTCTCCTGTCTCTCTTGCCCTCCCTC
CTTCTAGCCAGAAGCGCTGCTGGGTGGCGAGCTGCTCCAGCAAGGATCTGCCTACCCTGGGGTG
GGTGGGTTGGGGGGGATACCGCCTGCGCTCCTCGCTGCTGTGACACTGCACGGCCCGCCCAGCT
GGTACCTAGGAGGTGCTGGCTTCTGAGCCTCTCGGACGCCTATGCTGCGGGAGTCTCCTGGGGA
AGATCGAGGAGGCGCGCTCTCTCTGGATGCTAAACTACTGGTGGACTGAAGAAGAGAAGAGCCC
GGTCTCCTCCTGATGTTTTAAAAAAAAAAAGTAAAGCAATTTCTCCTGCGAGCCCAAGACAGGC
AATCCGCTTGAGATTTCTTCAAAATACCCCAGGGGAGGAGGAGATGGGCCGGATTTAGTAGGAC
AACTCGATTACTAATGACTCCGTGGCTGGCTGTGACCCACAGGGAAATCAGGTTTGCCTGTAAG
TACCGGAGCTGACATCGAAGGTGCTTAAAAATGCTGAGCGGCGTCTGGTTCCTCAGTGTGTTCA
CAGTGGCCGGGATCTTACAGATCGAGAGTCGCAAAACTGCCAAAGACATTTGCAAGATCCGCTG
TTTGTGCGAAGAGAAGGAAAACGTACTGAACATTAACTGTGAAAACAAAGGATTTACAACTGTC
AGTTTGCTTCAACCCCCCCAGTATCGCATCTATCAGCTGTTTCTGAACGGAAACCTCTTGACCA
GACTGTATCCAAATGAGTTTGTTAATTACTCAAATGCGGTGACTCTACATCTAGGTAACAATGG
GTTGCAGGAGATCCGACCTGGGGCATTTAGCGGTCTGAAAACTCTCAAGAGACTGCACCTCAAC
AACAACAAACTGGAGGTATTGCGAGAGGACACTTTTCTAGGCCTAGAGAGTCTGGAGTACCTCC
AAGCTGACTACAATTACATCAGCACCATCGAGGCAGGGGCATTCAGCAAACTGAATAAGCTCAA
AGTACTCATCTTGAATGACAACCTTTTGCTGTCTCTGCCTAGTAATGTATTTCGGTTCGTCCTG
CTGACTCATTTAGACCTGAGGGGGAACAGGTTGAAAGTAATGCCTTTTGCTGGTGTCCTTGAAC
ATATTGGAGGAATCATGGAAATTCAGCTGGAAGAAAACCCATGGAATTGCACCTGTGACTTACT
TCCTCTCAAGGCATGGCTGGACACCATTACTGTTTTTGTAGGGGAGATTGTCTGTGAAACTCCT
TTCAGGTTACATGGGAAAGATGTGACCCAGCTGACCAGACAAGACCTCTGTCCCAGAAAAAGTG
CAAGTGGTGATTCTAGTCAGAGGAGCAGCCATTCAGACACACATGTCCAAAGGCTGTCCCCTAC
AATGAATCCTGCTCTCAACCCAACCAGGGCTCCAAAAGCCAGCCGGCCACCCAAAATGAGAAAT
CGTCCAACTCCCCGAGTGACTGTGTCAAAAGACCGGCAGAGCTTTGGCCCAATCATGGTGTACC
AGACCAAGTCCCCCGTGGCCCTCACCTGTCCCAGCAGCTGTGTCTGTACCTCTCAGAGCTCAGA
CAATGGTCTAAATGTTAACTGCCAAGAAAGGAAGTTCACTAACATCTCTGACCTACAGCCCAAA
CCTACCAGTCCAAAGAAACTCTACCTGACAGGGAACTATCTCCAAACAGTCTATAAGAATGACC
TCTTAGAATACACTTCACTGGATTTGTTGCATTTAGGAAACAACAGGATTGCAGTCATCCAAGA
AGGTGCCTTTACAAACCTGACCAGTTTACGAAGACTTTATCTAAATGGCAATTACCTTGAAGTG
CTGTATCCTTCTATGTTTGATGGACTGCAGAGCTTGCAGTATCTCTATTTAGAGTATAATGTCA
TTAAGGAAATTAAGCCTCTGACCTTTGATGCTTTGATTAACCTCCAGCTCCTGTTTCTGAATAA
CAACCTGCTGAGGTCCTTACCTGATAATATATTTGGGGGCACAGCCCTCACCAGGCTGAATCTG
AGGAACAATCATTTTTCTCACCTGCCTGTGAAAGGGGTCCTGGACCAGCTTCCTGCTTTTATCC
AGATAGATCTGCAAGAGAACCCATGGGACTGCACCTGTGACATCATGGGGCTTAAGGACTGGAC
CGAACATGCCAATTCTCCTGTCATCATCAATGAGGTGACTTGTGAATCTCCCGCTAAGCATGCA
GGGGAGATACTGAAATTCCTGGGAAGGGAGGCTATTTGCCCAGATAATCCTAACCTGTCAGATG
GGACTGTTTTATCAATGAATCACAACACAGACACACCTAGATCACTTAGTGTGTCTCCTAGTTC
TTACCCCGAACTACACACTGAAGTTCCACTCTCCGTCTTAATTTTAGGATTGCTTGTGGTTTTT
ATCCTGTCTGTCTGTTTTGGGGCGGGGTTGTTCGTCTTTGTCCTGAAGCGTCGAAAGGGAGTGC
CAAGTGTTCCCAGGAGTGCCACCAACTTAGATGTAAGTTCCTTCCAGTTACAATATGGGTCTTA
CAACACCGAAACTAATGATAAAACTGATGGCCACGTCTATAACTACATTCCCCCACCTGTGGGT
CAGATGTGCCAAAACCCCATCTACATGCAGAAGGAAGGAGACCCAGTAGCCTATTACCGAAACC
TTCAGGATTTCAGCTATGGCAACCTGGAGGAAAAAAAAGAAGAACCTGCCACACTTGCTTACAC
AATAAGTGCCACTGAGTTGCTAGAAAAACAGGCCACACCAAAAGAGCCTGAGCTGCTGTATCAG
AATATCGCTGAGCGAGCTAAGGAACTTCCCAGTGCAGGCCTAGTCCACTATAACTTTTGTACCT
TACCTAAAAGGCAGTTTGCCCCTTCATATGAATCTCGACGCCAAAACCAAGACAGAATCAATAA
AACCGTTTTATATGGGACTCCCAGAAAATGCTTTGTGGGGCAGTCAAAGCCAGACCACCCTTTA
CTGCAAGCTAAGCCGCAATCTGAACCAGACTACCTCGAAGTTCTGGAAAAACAAACTGCAATCA
GTCAGCTGTGAAGGGAAACCATTTGCAATCCTATAGCATCAAAGGATGCAGCTCCAGACTGTTG
GAAAGGCTGCCTTTGCTTTTGTTGTGTCCTCCCTTCCCCAGTGCTAATGGGAGACTGAAAGCCT
TTGGGAGATGGGGTGAAGCAATGATACTGCTCTTGCAAGCTTTCCTTTAAATTATTTCTCTCTT
GCTCTCCCACCCCCCTTCCCCCTTCTCTTCTTAGAGACCATCAGAGAACATGAATGTTTCTACA
ATGCATTTTTTTCATATATTTTTGCTTAAGTTTTGTTTCTGTTTTCTTTCTTTCTTTTTTCTTT
TCCCAGTGTGGGAGTGAAAAGAAATGACAGTGAATGAAGGAATAGTAGGCAAAGTTTTCAAATG
AAAATGTTTTGTAGAAGATCTCCAAAGATCTTTTGGGACTACAACATTTTTTTTTTTTGTAAAT
AACGGTCTATGGTATTGCCATCTTCAGTTACCAAGTATAGGCCTGGGCATCGCTACTTCGTGCT
AAAGTGCCTTCGCACTTACAGACATAACTTAAATGTTGCTTTTAGCTTTGAAAATTGAAAGTAT
TTTAATGTGCTGTATTTTTAAAATTGAAATCAATGTAAAATAGATCTATATGTCAGCTATATTA
AGTCAACGTACAGTTTGCTTGAGTTATAGATACCAGCTTGTCATCAAATGATTCTAGCTTAGGA
CTTTATAGATGTAAATGTAAAATATTTCCTTTCTTCTGGGTTTGTTATAAGTGATTTTATTTAA
GTCAAGTAAGGGGATTTAACAGTGGACTAGAGGTAATAAGCCACCTCTGTCTGAATTAGTTATT
CATTAATAAAATATATTTAACCCAATATCAGACTGAATTGAACAATTAATGCCCTTCTGTGAAT
CATTATTTTACACTAACATGGTCAATGTTTTAGATTATTTTCCTAATTAAGAGTACATTGCACA
ACTACTAGTATATTTTTCCTGCATTATATTAGATATTTTTATATATTTAAATGAAAATCTGTAT
TTCTAACTTTTTAATTGAAACTAATATTTTTTCTGCCTATTGCAACATTTTCTATAAACACATA
CCAGTAGAGGCCGCCACACACCTCATTTAACCAAGACACAAGAGCCATTAAATACCTTGAAGGA
AGACTTCAAAGGTAAGGTGAAAACTTCCCACATAAGTTCTCTGCAAATTCAAGACAGCAGAGAT
AAAATTACATATCTCAAATTTTACTTCTTTGAGAATCAAAAATTAGACACATAATTCTTTTCAA
TCTTCACAAAGCAAGATTTTCCTCTTGATTTTAATTGAAACGTTAATGAGGTGCTATCAAATCA
TGGACTTATTTGCATCTCCAAATCCATTAACAGTTACCTAAACCCTGCAGTAAGCGTCTTTTTC
CCTTCTGCCTTCTTTGGGCATGCTTTACTTGAAAATTATTCTTGTTAGCTTCAGCAAGCCTTTC
GTTTTGTTCTTAGCCATCAATTATTTTAACTAACCAACTCTATATAACATTTATGAAGCCTTAT
TAGACTGTAAATAATTTTTAGATGCAAACATTATTGTATGACTTAAACAAACAACCTTTCTTTA
CAACAAAAATAGTTTTGTTTTGTCTATTGTAAATCCTTATGCAACTGGGATGGTGATCAGCATA
TAAAGTAGTCCAGCTTTTCAATTCCTTATTAAAGCAAGTGATGGCGTCTGAAAGAAGCACACTG
TTTCCTTTTCATAAATAGGTTACTGCACATAATAATCCTTTATTATCATGTGGAGATTGAAGTG
GATCCTGATAAGTTACTTTTAAAGCATTAATTTGACTAATAGTACATTACCACTATTAACAATT
CATGTTACAGGCTTTCAATTAGAAATTACTTAACTCCAAATCATTTTGATTAATAATTAAAGGT
GCAAAACAGACATTTTAAACAACAGAAGATAGTTGTGTCCATATATAAAAGTAAAGGATACTCA
AGAAATTAAAAGGTTTCAACAATCTGAAATCTCTGGATATCTACAGTGACTGACAAATATATTC
ACTGTTTGCTTAAAAGTCATGATTGCCATTTATATCCATTAGCTTACAGCTGAAAATGCTGGGT
CAAAGTGATCTACACATATGTTAATATATAGAAATTTTACATTCTGTTTAAGAGAAGCCAGAGT
AGTGAAATAGTCAGGCATGGAGAGAGCTCCTGGAAAGCACTTCATCTTTGGCTGACATTTATAT
ATAAACACAAGAGTTTTAAACATTTTCTTAAAGTGGATTTCCTTTGGTATAATGATCAATACAT
TGTACAGAGGCAGATATTTGGGGAAGTCATTGTGAAGGCAAATCAGCATATATCAAGACAGTTT
TTAGTTTTTAACTGTGATTTGATCTGTTAATGACATGATTCTACTTTCGTGTTTCTTCTTATTC
TCCTGAAAAGTAAACCATTCGTGTTAATGACAAAATTAGTTTATTAATCGTAATGAAATATACT
TTACTTCTCATTCATTTTCATGATTTTTTTTGAAGAGGCCTCCTGGAAGAACTCAAAACCACAA
ATTCTTTAACTCAATAATTACTAATCATTTCAATATTTTTATGTTTCTAGATTTGTTCTTTATT
TACATTTGAGTTATAAAAGCAAAACTTTCAGATGTGATACAAACGGTTTTATTTAAAAGCATAA
TAGCACTCCTCGTGTTTTAATCTTTACTGTCAAATGCAAGCATGAGCACTTCAAGTTTAATTAC
TTTATTGACATTCCCACTGGTTGTATTCTGATTTTCTTAATGTCTCAACACTTTCAAGCCTATT
TTAATTTAAGGTTTTTATTTTTAACGTCTCCAGCTGAATATATTATTAATTCCTTACTATTTCA
CAAGCAGATTGTAATGAGTGTGAGCCTAATAAGAACAGTTCCAGACAACATAATGACATTTCTA
GGACTCCACCTGGAACACAACTAGATGTCTGGCCCTATGAAATGTCAAAAAGCAATTACTCTAG
ATTCTACTGTTTAATTAGTTACTTTCACGGCTTCTACATATTCCAGTGGGTAAATTTGTACAAA
ATTCTCAAACATACTCCTCGTCAGACTTGACACCATTGCCGAGAGTATTTGATATGAACTTACG
TGAACCTTGTGCCTTCTTTCCTCAGGCATTTGGTGAGTAAGAAAGAGACCTTCAATATCCTCTT
TGTCCTCTGACTTCTAAGGTGACTTAATTTTTCTAAACAATTCTGTGTCATAAAGGGCTTAATA
TTTTAAAGATTTATAAAATATATGTAATAAATCAAAGATAGTTTCTGTCATTTCTCAAACTCTG
AAAATTCCTTATGATATTATACTACACATTCCAGAAACATACTGGATTGAATGCTAGAGTGAAT
GAAGCCTTCCAGATGGTCTCTTACTCACTTTCTTTCCTCATTTATTCATTCATTCATTCATTTA
TTCATTCATTCATGCACTCATTTAATATATCTTGAGTGCTCTTTTCCCTGGTGCCTGGATCTGT
TGTGTGCTGAGGGGCCACATATTTATTATGTAAGACAGGATCTCTAATTGCCTCACATCAAGCC
TTTACCCCTACTCCCACTATTACTAAATCCCCCTCCCCTACATACCTCCCAAATGTGGTAAGGA
GCATAGTACAAAATAAAAAGAGAGCTTTACCTGAATGAAAATCACCCCTAGGTAGGCAGGGTGG
ACAGGAATGCAATGTAGAAGGTTGAGTTTTTAAATTCTCTGGACTAAAATATTAAACGGATAAA
TCATAGACTGGTTACCATGTAAGTGCTATTAACATACCTTTGGAATTACATAGTTAAAAGGGGG
GAAATCCCACTAAAGTAAACCTAAATCACCACAGAATTAGGTCAATCATGGTCTGATGATAGCT
ATATATTTGTGCTATCTACATCAACTTTGTAAAGTTGAATACTAGAATTGTAAATATGAAAACC
ACTGATATACTTCAAGGTTTTGGGATATTTGTGTTTTAGAGGCAATATTACTATCTATTTTAGT
GGCTTAAAGGGTAATATTTTGGCTTTACCTATACAATGATAAGAGACTTTAGTGTGTGAGAGAG
ATCAAAGTATTATGTATAAGCCTACTTTGCTTCTTACAATGGTTGTGGAAAAAGTAGTGTGCAG
ATTGAACTAAAAAAATATCAAATTCTATTTCAAGTGCATTAAGGGAGCTGCCATTTAGATAAAA
TTTGGGAATCTCTTTATGAGGCAGAAAACTATTTTATAATGCAAATAACCATTCTATCTGTTTT
GTATATTTGGATTTTCAATATCAATTTTGCTTAAAACCAAGTTCATATGCATAATAAGAGTGTG
TTTTGTCAGTATTGCTTGTACTATCCATTTCTTGGTTGCTAAGGGCTTATACTTAAAGTCTGCT
GCAGTTTTATGTGAAGTGAGCTATCTACGATTTTGATGGCACAATAGCATTCCTGAACGTCTGG
ACTAGCAAGCCCATTCCAATACCATTGAACACAGGACTCTTGCTCAGCAGCCTCTCCCCTCCCA
AGACTTTGTTTCCTTAGAAGGTAGAATGACTCCTGTATTCACACCTATAAAGTGCTTAGAGATA
CAGGTTTTATAAAACAAAATACATATGTTACTATGTAAACATACTGAATTGCATGTGTGTTGGA
AATTTTTAGCAGTATTTTAGCTTGAAAGTATGTGTAAAATTCTGTTAGACTTAGTTGCAAATAA
TTGTTTTCAAGTTGTTGGAATAAATGACAAACGAAACAATTTATTATGTAAATAAATTCTTGTG
CCAAATAGTGA

hide sequence

RefSeq Acc Id:

XM_017602027 ⟹ XP_017457516

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	150,287,427 - 150,299,832 (+)	NCBI
mRatBN7.2	X	145,246,448 - 145,259,983 (+)	NCBI
Rnor_6.0	X	151,099,388 - 151,111,816 (+)	NCBI

Sequence:

show sequence

TACAGGAATGTATCCAACTCAGATTGCTGACTGCTTTTTCACTTGTCCGTAACTTCCACCCAGG
GGATCTTAGGGTCCCCTCAGATATGATATCAAGCAAGTGTCATCCTTATTTCACTTGACCTAGT
CTGACGGGTAGCACATGGTAGAAGCTGCAAGAGCTGGGCAGAGTTCCAGTAAAGAGGGGCTGAC
AGGCAAAAGCAGTGCTCTGCAACGCTTGTCAGACAGAGAACTAGAGCAGCGGCTCCTTTGTGGG
CTGGTACATCCCCATCCGGAGTGCACAGCAGGGATATTTGATCTGCAGGGTGATTGATAAGTGC
TGGAGAGGGGCAGCCATCCTTCCCTCCCTCCCTCCCTCTTCTCCTGTCTCTCTTGCCCTCCCTC
CTTCTAGCCAGAAGCGCTGCTGGGTGGCGAGCTGCTCCAGCAAGGATCTGCCTACCCTGGGGTG
GGTGGGTTGGGGGGGATACCGCCTGCGCTCCTCGCTGCTGTGACACTGCACGGCCCGCCCAGCT
GGTACCTAGGAGGTGCTGGCTTCTGAGCCTCTCGGACGCCTATGCTGCGGGAGTCTCCTGGGGA
AGATCGAGGAGGCGCGCTCTCTCTGGATGCTAAACTACTGGTGGACTGAAGAAGAGAAGAGCCC
GGTCTCCTCCTGATGTGTTTGCCTGTAAGTACCGGAGCTGACATCGAAGGTGCTTAAAAATGCT
GAGCGGCGTCTGGTTCCTCAGTGTGTTCACAGTGGCCGGGATCTTACAGATCGAGAGTCGCAAA
ACTGCCAAAGACATTTGCAAGATCCGCTGTTTGTGCGAAGAGAAGGAAAACGTACTGAACATTA
ACTGTGAAAACAAAGGATTTACAACTGTCAGTTTGCTTCAACCCCCCCAGTATCGCATCTATCA
GCTGTTTCTGAACGGAAACCTCTTGACCAGACTGTATCCAAATGAGTTTGTTAATTACTCAAAT
GCGGTGACTCTACATCTAGGTAACAATGGGTTGCAGGAGATCCGACCTGGGGCATTTAGCGGTC
TGAAAACTCTCAAGAGACTGCACCTCAACAACAACAAACTGGAGGTATTGCGAGAGGACACTTT
TCTAGGCCTAGAGAGTCTGGAGTACCTCCAAGCTGACTACAATTACATCAGCACCATCGAGGCA
GGGGCATTCAGCAAACTGAATAAGCTCAAAGTACTCATCTTGAATGACAACCTTTTGCTGTCTC
TGCCTAGTAATGTATTTCGGTTCGTCCTGCTGACTCATTTAGACCTGAGGGGGAACAGGTTGAA
AGTAATGCCTTTTGCTGGTGTCCTTGAACATATTGGAGGAATCATGGAAATTCAGCTGGAAGAA
AACCCATGGAATTGCACCTGTGACTTACTTCCTCTCAAGGCATGGCTGGACACCATTACTGTTT
TTGTAGGGGAGATTGTCTGTGAAACTCCTTTCAGGTTACATGGGAAAGATGTGACCCAGCTGAC
CAGACAAGACCTCTGTCCCAGAAAAAGTGCAAGTGGTGATTCTAGTCAGAGGAGCAGCCATTCA
GACACACATGTCCAAAGGCTGTCCCCTACAATGAATCCTGCTCTCAACCCAACCAGGGCTCCAA
AAGCCAGCCGGCCACCCAAAATGAGAAATCGTCCAACTCCCCGAGTGACTGTGTCAAAAGACCG
GCAGAGCTTTGGCCCAATCATGGTGTACCAGACCAAGTCCCCCGTGGCCCTCACCTGTCCCAGC
AGCTGTGTCTGTACCTCTCAGAGCTCAGACAATGGTCTAAATGTTAACTGCCAAGAAAGGAAGT
TCACTAACATCTCTGACCTACAGCCCAAACCTACCAGTCCAAAGAAACTCTACCTGACAGGGAA
CTATCTCCAAACAGTCTATAAGAATGACCTCTTAGAATACACTTCACTGGATTTGTTGCATTTA
GGAAACAACAGGATTGCAGTCATCCAAGAAGGTGCCTTTACAAACCTGACCAGTTTACGAAGAC
TTTATCTAAATGGCAATTACCTTGAAGTGCTGTATCCTTCTATGTTTGATGGACTGCAGAGCTT
GCAGTATCTCTATTTAGAGTATAATGTCATTAAGGAAATTAAGCCTCTGACCTTTGATGCTTTG
ATTAACCTCCAGCTCCTGTTTCTGAATAACAACCTGCTGAGGTCCTTACCTGATAATATATTTG
GGGGCACAGCCCTCACCAGGCTGAATCTGAGGAACAATCATTTTTCTCACCTGCCTGTGAAAGG
GGTCCTGGACCAGCTTCCTGCTTTTATCCAGATAGATCTGCAAGAGAACCCATGGGACTGCACC
TGTGACATCATGGGGCTTAAGGACTGGACCGAACATGCCAATTCTCCTGTCATCATCAATGAGG
TGACTTGTGAATCTCCCGCTAAGCATGCAGGGGAGATACTGAAATTCCTGGGAAGGGAGGCTAT
TTGCCCAGATAATCCTAACCTGTCAGATGGGACTGTTTTATCAATGAATCACAACACAGACACA
CCTAGATCACTTAGTGTGTCTCCTAGTTCTTACCCCGAACTACACACTGAAGTTCCACTCTCCG
TCTTAATTTTAGGATTGCTTGTGGTTTTTATCCTGTCTGTCTGTTTTGGGGCGGGGTTGTTCGT
CTTTGTCCTGAAGCGTCGAAAGGGAGTGCCAAGTGTTCCCAGGAGTGCCACCAACTTAGATGTA
AGTTCCTTCCAGTTACAATATGGGTCTTACAACACCGAAACTAATGATAAAACTGATGGCCACG
TCTATAACTACATTCCCCCACCTGTGGGTCAGATGTGCCAAAACCCCATCTACATGCAGAAGGA
AGGAGACCCAGTAGCCTATTACCGAAACCTTCAGGATTTCAGCTATGGCAACCTGGAGGAAAAA
AAAGAAGAACCTGCCACACTTGCTTACACAATAAGTGCCACTGAGTTGCTAGAAAAACAGGCCA
CACCAAAAGAGCCTGAGCTGCTGTATCAGAATATCGCTGAGCGAGCTAAGGAACTTCCCAGTGC
AGGCCTAGTCCACTATAACTTTTGTACCTTACCTAAAAGGCAGTTTGCCCCTTCATATGAATCT
CGACGCCAAAACCAAGACAGAATCAATAAAACCGTTTTATATGGGACTCCCAGAAAATGCTTTG
TGGGGCAGTCAAAGCCAGACCACCCTTTACTGCAAGCTAAGCCGCAATCTGAACCAGACTACCT
CGAAGTTCTGGAAAAACAAACTGCAATCAGTCAGCTGTGAAGGGAAACCATTTGCAATCCTATA
GCATCAAAGGATGCAGCTCCAGACTGTTGGAAAGGCTGCCTTTGCTTTTGTTGTGTCCTCCCTT
CCCCAGTGCTAATGGGAGACTGAAAGCCTTTGGGAGATGGGGTGAAGCAATGATACTGCTCTTG
CAAGCTTTCCTTTAAATTATTTCTCTCTTGCTCTCCCACCCCCCTTCCCCCTTCTCTTCTTAGA
GACCATCAGAGAACATGAATGTTTCTACAATGCATTTTTTTCATATATTTTTGCTTAAGTTTTG
TTTCTGTTTTCTTTCTTTCTTTTTTCTTTTCCCAGTGTGGGAGTGAAAAGAAATGACAGTGAAT
GAAGGAATAGTAGGCAAAGTTTTCAAATGAAAATGTTTTGTAGAAGATCTCCAAAGATCTTTTG
GGACTACAACATTTTTTTTTTTTGTAAATAACGGTCTATGGTATTGCCATCTTCAGTTACCAAG
TATAGGCCTGGGCATCGCTACTTCGTGCTAAAGTGCCTTCGCACTTACAGACATAACTTAAATG
TTGCTTTTAGCTTTGAAAATTGAAAGTATTTTAATGTGCTGTATTTTTAAAATTGAAATCAATG
TAAAATAGATCTATATGTCAGCTATATTAAGTCAACGTACAGTTTGCTTGAGTTATAGATACCA
GCTTGTCATCAAATGATTCTAGCTTAGGACTTTATAGATGTAAATGTAAAATATTTCCTTTCTT
CTGGGTTTGTTATAAGTGATTTTATTTAAGTCAAGTAAGGGGATTTAACAGTGGACTAGAGGTA
ATAAGCCACCTCTGTCTGAATTAGTTATTCATTAATAAAATATATTTAACCCAATATCAGACTG
AATTGAACAATTAATGCCCTTCTGTGAATCATTATTTTACACTAACATGGTCAATGTTTTAGAT
TATTTTCCTAATTAAGAGTACATTGCACAACTACTAGTATATTTTTCCTGCATTATATTAGATA
TTTTTATATATTTAAATGAAAATCTGTATTTCTAACTTTTTAATTGAAACTAATATTTTTTCTG
CCTATTGCAACATTTTCTATAAACACATACCAGTAGAGGCCGCCACACACCTCATTTAACCAAG
ACACAAGAGCCATTAAATACCTTGAAGGAAGACTTCAAAGGTAAGGTGAAAACTTCCCACATAA
GTTCTCTGCAAATTCAAGACAGCAGAGATAAAATTACATATCTCAAATTTTACTTCTTTGAGAA
TCAAAAATTAGACACATAATTCTTTTCAATCTTCACAAAGCAAGATTTTCCTCTTGATTTTAAT
TGAAACGTTAATGAGGTGCTATCAAATCATGGACTTATTTGCATCTCCAAATCCATTAACAGTT
ACCTAAACCCTGCAGTAAGCGTCTTTTTCCCTTCTGCCTTCTTTGGGCATGCTTTACTTGAAAA
TTATTCTTGTTAGCTTCAGCAAGCCTTTCGTTTTGTTCTTAGCCATCAATTATTTTAACTAACC
AACTCTATATAACATTTATGAAGCCTTATTAGACTGTAAATAATTTTTAGATGCAAACATTATT
GTATGACTTAAACAAACAACCTTTCTTTACAACAAAAATAGTTTTGTTTTGTCTATTGTAAATC
CTTATGCAACTGGGATGGTGATCAGCATATAAAGTAGTCCAGCTTTTCAATTCCTTATTAAAGC
AAGTGATGGCGTCTGAAAGAAGCACACTGTTTCCTTTTCATAAATAGGTTACTGCACATAATAA
TCCTTTATTATCATGTGGAGATTGAAGTGGATCCTGATAAGTTACTTTTAAAGCATTAATTTGA
CTAATAGTACATTACCACTATTAACAATTCATGTTACAGGCTTTCAATTAGAAATTACTTAACT
CCAAATCATTTTGATTAATAATTAAAGGTGCAAAACAGACATTTTAAACAACAGAAGATAGTTG
TGTCCATATATAAAAGTAAAGGATACTCAAGAAATTAAAAGGTTTCAACAATCTGAAATCTCTG
GATATCTACAGTGACTGACAAATATATTCACTGTTTGCTTAAAAGTCATGATTGCCATTTATAT
CCATTAGCTTACAGCTGAAAATGCTGGGTCAAAGTGATCTACACATATGTTAATATATAGAAAT
TTTACATTCTGTTTAAGAGAAGCCAGAGTAGTGAAATAGTCAGGCATGGAGAGAGCTCCTGGAA
AGCACTTCATCTTTGGCTGACATTTATATATAAACACAAGAGTTTTAAACATTTTCTTAAAGTG
GATTTCCTTTGGTATAATGATCAATACATTGTACAGAGGCAGATATTTGGGGAAGTCATTGTGA
AGGCAAATCAGCATATATCAAGACAGTTTTTAGTTTTTAACTGTGATTTGATCTGTTAATGACA
TGATTCTACTTTCGTGTTTCTTCTTATTCTCCTGAAAAGTAAACCATTCGTGTTAATGACAAAA
TTAGTTTATTAATCGTAATGAAATATACTTTACTTCTCATTCATTTTCATGATTTTTTTTGAAG
AGGCCTCCTGGAAGAACTCAAAACCACAAATTCTTTAACTCAATAATTACTAATCATTTCAATA
TTTTTATGTTTCTAGATTTGTTCTTTATTTACATTTGAGTTATAAAAGCAAAACTTTCAGATGT
GATACAAACGGTTTTATTTAAAAGCATAATAGCACTCCTCGTGTTTTAATCTTTACTGTCAAAT
GCAAGCATGAGCACTTCAAGTTTAATTACTTTATTGACATTCCCACTGGTTGTATTCTGATTTT
CTTAATGTCTCAACACTTTCAAGCCTATTTTAATTTAAGGTTTTTATTTTTAACGTCTCCAGCT
GAATATATTATTAATTCCTTACTATTTCACAAGCAGATTGTAATGAGTGTGAGCCTAATAAGAA
CAGTTCCAGACAACATAATGACATTTCTAGGACTCCACCTGGAACACAACTAGATGTCTGGCCC
TATGAAATGTCAAAAAGCAATTACTCTAGATTCTACTGTTTAATTAGTTACTTTCACGGCTTCT
ACATATTCCAGTGGGTAAATTTGTACAAAATTCTCAAACATACTCCTCGTCAGACTTGACACCA
TTGCCGAGAGTATTTGATATGAACTTACGTGAACCTTGTGCCTTCTTTCCTCAGGCATTTGGTG
AGTAAGAAAGAGACCTTCAATATCCTCTTTGTCCTCTGACTTCTAAGGTGACTTAATTTTTCTA
AACAATTCTGTGTCATAAAGGGCTTAATATTTTAAAGATTTATAAAATATATGTAATAAATCAA
AGATAGTTTCTGTCATTTCTCAAACTCTGAAAATTCCTTATGATATTATACTACACATTCCAGA
AACATACTGGATTGAATGCTAGAGTGAATGAAGCCTTCCAGATGGTCTCTTACTCACTTTCTTT
CCTCATTTATTCATTCATTCATTCATTTATTCATTCATTCATGCACTCATTTAATATATCTTGA
GTGCTCTTTTCCCTGGTGCCTGGATCTGTTGTGTGCTGAGGGGCCACATATTTATTATGTAAGA
CAGGATCTCTAATTGCCTCACATCAAGCCTTTACCCCTACTCCCACTATTACTAAATCCCCCTC
CCCTACATACCTCCCAAATGTGGTAAGGAGCATAGTACAAAATAAAAAGAGAGCTTTACCTGAA
TGAAAATCACCCCTAGGTAGGCAGGGTGGACAGGAATGCAATGTAGAAGGTTGAGTTTTTAAAT
TCTCTGGACTAAAATATTAAACGGATAAATCATAGACTGGTTACCATGTAAGTGCTATTAACAT
ACCTTTGGAATTACATAGTTAAAAGGGGGGAAATCCCACTAAAGTAAACCTAAATCACCACAGA
ATTAGGTCAATCATGGTCTGATGATAGCTATATATTTGTGCTATCTACATCAACTTTGTAAAGT
TGAATACTAGAATTGTAAATATGAAAACCACTGATATACTTCAAGGTTTTGGGATATTTGTGTT
TTAGAGGCAATATTACTATCTATTTTAGTGGCTTAAAGGGTAATATTTTGGCTTTACCTATACA
ATGATAAGAGACTTTAGTGTGTGAGAGAGATCAAAGTATTATGTATAAGCCTACTTTGCTTCTT
ACAATGGTTGTGGAAAAAGTAGTGTGCAGATTGAACTAAAAAAATATCAAATTCTATTTCAAGT
GCATTAAGGGAGCTGCCATTTAGATAAAATTTGGGAATCTCTTTATGAGGCAGAAAACTATTTT
ATAATGCAAATAACCATTCTATCTGTTTTGTATATTTGGATTTTCAATATCAATTTTGCTTAAA
ACCAAGTTCATATGCATAATAAGAGTGTGTTTTGTCAGTATTGCTTGTACTATCCATTTCTTGG
TTGCTAAGGGCTTATACTTAAAGTCTGCTGCAGTTTTATGTGAAGTGAGCTATCTACGATTTTG
ATGGCACAATAGCATTCCTGAACGTCTGGACTAGCAAGCCCATTCCAATACCATTGAACACAGG
ACTCTTGCTCAGCAGCCTCTCCCCTCCCAAGACTTTGTTTCCTTAGAAGGTAGAATGACTCCTG
TATTCACACCTATAAAGTGCTTAGAGATACAGGTTTTATAAAACAAAATACATATGTTACTATG
TAAACATACTGAATTGCATGTGTGTTGGAAATTTTTAGCAGTATTTTAGCTTGAAAGTATGTGT
AAAATTCTGTTAGACTTAGTTGCAAATAATTGTTTTCAAGTTGTTGGAATAAATGACAAACGAA
ACAATTTATTATGTAAATAAATTCTTGTGCCAAATAGTGA

hide sequence

RefSeq Acc Id:

XM_063279973 ⟹ XP_063136043

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	150,291,387 - 150,299,832 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101057	(Get FASTA)	NCBI Sequence Viewer
	NP_001420964	(Get FASTA)	NCBI Sequence Viewer
	NP_001420965	(Get FASTA)	NCBI Sequence Viewer
	XP_006257688	(Get FASTA)	NCBI Sequence Viewer
	XP_017457516	(Get FASTA)	NCBI Sequence Viewer
	XP_063136043	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL86188	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000015401.6
	ENSRNOP00000077976.1
	ENSRNOP00000088481.1

RefSeq Acc Id:	NP_001101057 ⟸ NM_001107587
- Peptide Label:	precursor
- UniProtKB:	D3ZK41 (UniProtKB/TrEMBL), A6K520 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLSGVWFLSVFTVAGILQIESRKTAKDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRI YQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLRED TFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVLLTHLDLRGNR LKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVCETPFRLHGKDVTQ LTRQDLCPRKSASGDSSQRSSHSDTHVQRLSPTMNPALNPTRAPKASRPPKMRNRPTPRVTVSK DRQSFGPIMVYQTKSPVALTCPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLT GNYLQTVYKNDLLEYTSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQ SLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRNNHFSHLPV KGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVIINEVTCESPAKHAGEILKFLGRE AICPDNPNLSDGTVLSMNHNTDTPRSLSVSPSSYPELHTEVPLSVLILGLLVVFILSVCFGAGL FVFVLKRRKGVPSVPRSATNLDVSSFQLQYGSYNTETNDKTDGHVYNYIPPPVGQMCQNPIYMQ KEGDPVAYYRNLQDFSYGNLEEKKEEPATLAYTISATELLEKQATPKEPELLYQNIAERAKELP SAGLVHYNFCTLPKRQFAPSYESRRQNQDRINKTVLYGTPRKCFVGQSKPDHPLLQAKPQSEPD YLEVLEKQTAISQL hide sequence

RefSeq Acc Id:

XP_006257688 ⟸ XM_006257626

- Peptide Label:

isoform X1

- Sequence:

show sequence

MLSGVWFLSVFTVAGILQIESRKTAKDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRI
YQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLRED
TFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVLLTHLDLRGNR
LKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVCETPFRLHGKDVTQ
LTRQDLCPRKSASGDSSQRSSHSDTHVQRLSPTMNPALNPTRAPKASRPPKMRNRPTPRVTVSK
DRQSFGPIMVYQTKSPVALTCPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLT
GNYLQTVYKNDLLEYTSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQ
SLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRNNHFSHLPV
KGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVIINEVTCESPAKHAGEILKFLGRE
AICPDNPNLSDGTVLSMNHNTDTPRSLSVSPSSYPELHTEVPLSVLILGLLVVFILSVCFGAGL
FVFVLKRRKGVPSVPRSATNLDVSSFQLQYGSYNTETNDKTDGHVYNYIPPPVGQMCQNPIYMQ
KEGDPVAYYRNLQDFSYGNLEEKKEEPATLAYTISATELLEKQATPKEPELLYQNIAERAKELP
SAGLVHYNFCTLPKRQFAPSYESRRQNQDRINKTVLYGTPRKCFVGQSKPDHPLLQAKPQSEPD
YLEVLEKQTAISQL

hide sequence

RefSeq Acc Id:

XP_017457516 ⟸ XM_017602027

- Peptide Label:

isoform X1

- Sequence:

show sequence

MLSGVWFLSVFTVAGILQIESRKTAKDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRI
YQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLRED
TFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFVLLTHLDLRGNR
LKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVCETPFRLHGKDVTQ
LTRQDLCPRKSASGDSSQRSSHSDTHVQRLSPTMNPALNPTRAPKASRPPKMRNRPTPRVTVSK
DRQSFGPIMVYQTKSPVALTCPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSPKKLYLT
GNYLQTVYKNDLLEYTSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQ
SLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRNNHFSHLPV
KGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVIINEVTCESPAKHAGEILKFLGRE
AICPDNPNLSDGTVLSMNHNTDTPRSLSVSPSSYPELHTEVPLSVLILGLLVVFILSVCFGAGL
FVFVLKRRKGVPSVPRSATNLDVSSFQLQYGSYNTETNDKTDGHVYNYIPPPVGQMCQNPIYMQ
KEGDPVAYYRNLQDFSYGNLEEKKEEPATLAYTISATELLEKQATPKEPELLYQNIAERAKELP
SAGLVHYNFCTLPKRQFAPSYESRRQNQDRINKTVLYGTPRKCFVGQSKPDHPLLQAKPQSEPD
YLEVLEKQTAISQL

hide sequence

Ensembl Acc Id:

ENSRNOP00000015401 ⟸ ENSRNOT00000015401

Ensembl Acc Id:

ENSRNOP00000088481 ⟸ ENSRNOT00000108501

Ensembl Acc Id:

ENSRNOP00000077976 ⟸ ENSRNOT00000094061

RefSeq Acc Id:	XP_063136043 ⟸ XM_063279973
- Peptide Label:	isoform X1
- UniProtKB:	A6K520 (UniProtKB/TrEMBL), D3ZK41 (UniProtKB/TrEMBL)

Protein Domains

LRRCT LRRNT

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZK41-F1-model_v2	AlphaFold	D3ZK41	1-846	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1561361	AgrOrtholog
BioCyc Gene	G2FUF-827	BioCyc
Ensembl Genes	ENSRNOG00000011562	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000015401.7	UniProtKB/TrEMBL
	ENSRNOT00000094061.1	UniProtKB/TrEMBL
	ENSRNOT00000108501.1	UniProtKB/TrEMBL
Gene3D-CATH	3.80.10.10	UniProtKB/TrEMBL
InterPro	Cys-rich_flank_reg_C	UniProtKB/TrEMBL
	L_dom-like	UniProtKB/TrEMBL
	Leu-rich_rpt	UniProtKB/TrEMBL
	Leu-rich_rpt_typical-subtyp	UniProtKB/TrEMBL
	LRR-contain_N	UniProtKB/TrEMBL
KEGG Report	rno:309349	UniProtKB/TrEMBL
NCBI Gene	309349	ENTREZGENE
PANTHER	PTHR45773	UniProtKB/TrEMBL
	SLIT AND NTRK-LIKE PROTEIN 2	UniProtKB/TrEMBL
Pfam	LRR_8	UniProtKB/TrEMBL
PhenoGen	Slitrk2	PhenoGen
PROSITE	LRR	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000011562	RatGTEx
SMART	LRR_TYP	UniProtKB/TrEMBL
	LRRCT	UniProtKB/TrEMBL
	LRRNT	UniProtKB/TrEMBL
Superfamily-SCOP	L domain-like	UniProtKB/TrEMBL
UniProt	A6K520	ENTREZGENE, UniProtKB/TrEMBL
	D3ZK41	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Slitrk2	SLIT and NTRK-like family, member 2	Slitrk2_predicted	SLIT and NTRK-like family, member 2 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Slitrk2_predicted	SLIT and NTRK-like family, member 2 (predicted)	RGD1561361_predicted	similar to neuronal transmembrane protein Slitrk2 (predicted)	Symbol and Name updated	1299863	APPROVED
2006-03-07	RGD1561361_predicted	similar to neuronal transmembrane protein Slitrk2 (predicted)	LOC309349	similar to neuronal transmembrane protein Slitrk2	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC309349	similar to neuronal transmembrane protein Slitrk2			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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