Selenoi (selenoprotein I) - Rat Genome Database

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Gene: Selenoi (selenoprotein I) Rattus norvegicus
Analyze
Symbol: Selenoi
Name: selenoprotein I
RGD ID: 1560938
Description: Predicted to enable ethanolaminephosphotransferase activity. Predicted to be involved in ether lipid biosynthetic process; myelination; and phosphatidylethanolamine biosynthetic process. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 81. Orthologous to human SELENOI (selenoprotein I); INTERACTS WITH (R,R,R)-alpha-tocopherol; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: Ept1; ethanolaminephosphotransferase 1; ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific); LOC362713; MGC188326; RGD1560938; Seli; similar to mKIAA1724 protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8631,792,972 - 31,831,170 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl631,792,973 - 31,831,523 (-)EnsemblGRCr8
mRatBN7.2626,073,127 - 26,111,326 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl626,072,648 - 26,111,314 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx626,365,769 - 26,403,967 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0626,681,651 - 26,719,849 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0626,161,058 - 26,199,262 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0627,473,748 - 27,512,287 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl627,473,748 - 27,512,287 (-)Ensemblrn6Rnor6.0
Rnor_5.0637,285,872 - 37,323,978 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4626,058,654 - 26,096,822 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera625,550,258 - 25,588,218 (-)NCBICelera
Cytogenetic Map6q14NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
(R,R,R)-alpha-tocopherol  (EXP)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-methylcholine  (ISO)
2-palmitoylglycerol  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
acrylamide  (EXP)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
arsane  (ISO)
arsenic acid  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
dibenz[a,h]anthracene  (ISO)
Dibutyl phosphate  (ISO)
diethylstilbestrol  (EXP)
dioxygen  (ISO)
dorsomorphin  (ISO)
epoxiconazole  (ISO)
fluoxetine  (ISO)
formaldehyde  (ISO)
indole-3-methanol  (EXP)
L-ascorbic acid  (EXP)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
methamphetamine  (ISO)
methylmercury chloride  (ISO)
N-acetyl-L-cysteine  (EXP)
N-nitrosodiethylamine  (EXP)
nickel atom  (ISO)
oxaliplatin  (EXP)
panobinostat  (ISO)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
propiconazole  (ISO)
rotenone  (EXP)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (EXP,ISO)
sunitinib  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
triphenyl phosphate  (ISO)
troglitazone  (ISO)
uranium atom  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:12775843   PMID:17132865   PMID:24270810  


Genomics

Comparative Map Data
Selenoi
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8631,792,972 - 31,831,170 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl631,792,973 - 31,831,523 (-)EnsemblGRCr8
mRatBN7.2626,073,127 - 26,111,326 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl626,072,648 - 26,111,314 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx626,365,769 - 26,403,967 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0626,681,651 - 26,719,849 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0626,161,058 - 26,199,262 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0627,473,748 - 27,512,287 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl627,473,748 - 27,512,287 (-)Ensemblrn6Rnor6.0
Rnor_5.0637,285,872 - 37,323,978 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4626,058,654 - 26,096,822 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera625,550,258 - 25,588,218 (-)NCBICelera
Cytogenetic Map6q14NCBI
SELENOI
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38226,346,143 - 26,395,885 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl226,308,547 - 26,395,885 (+)Ensemblhg38GRCh38
GRCh37226,569,011 - 26,618,753 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36226,422,458 - 26,472,263 (+)NCBIBuild 36Build 36hg18NCBI36
Celera226,412,508 - 26,462,300 (+)NCBICelera
Cytogenetic Map2p23.3NCBI
HuRef226,308,204 - 26,357,625 (+)NCBIHuRef
CHM1_1226,498,915 - 26,548,999 (+)NCBICHM1_1
T2T-CHM13v2.0226,384,823 - 26,434,484 (+)NCBIT2T-CHM13v2.0
Selenoi
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39530,437,579 - 30,477,428 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl530,437,579 - 30,477,425 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38530,232,581 - 30,272,430 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl530,232,581 - 30,272,427 (+)Ensemblmm10GRCm38
MGSCv37530,559,158 - 30,598,976 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36530,563,469 - 30,599,096 (+)NCBIMGSCv36mm8
Celera527,750,972 - 27,791,466 (+)NCBICelera
Cytogenetic Map5B1NCBI
cM Map516.22NCBI
Selenoi
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554698,369,479 - 8,408,659 (+)Ensembl
ChiLan1.0NW_0049554698,369,499 - 8,410,628 (+)NCBIChiLan1.0ChiLan1.0
SELENOI
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v212100,120,518 - 100,169,782 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A100,124,486 - 100,173,725 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A26,344,856 - 26,393,359 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A26,437,502 - 26,485,896 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A26,437,503 - 26,479,093 (+)EnsemblpanPan2panpan1.1
SELENOI
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11720,431,176 - 20,469,694 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1720,431,176 - 20,517,753 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1720,326,279 - 20,364,573 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01720,753,374 - 20,791,716 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1720,753,370 - 20,793,185 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11720,440,157 - 20,478,444 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01720,451,132 - 20,489,437 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01720,497,474 - 20,535,814 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Selenoi
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629264,740,115 - 64,787,120 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364936,055,277 - 6,099,458 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364936,052,094 - 6,099,430 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SELENOI
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3112,628,744 - 112,671,078 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.13112,632,985 - 112,671,127 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23119,570,474 - 119,608,570 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SELENOI
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11481,254,933 - 81,303,584 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1481,258,491 - 81,303,618 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604530,853,496 - 30,902,600 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Selenoi
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247388,487,384 - 8,526,163 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247388,487,408 - 8,532,910 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Selenoi
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1723,765,205 - 23,807,059 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Selenoi
111 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6197587946975879Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)62009763565097635Rat
8552910Pigfal5Plasma insulin-like growth factor 1 level QTL 54.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)62265388967653889Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)62009763565097635Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6323998948239989Rat
1331779Rf38Renal function QTL 382.876kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)63118500276185002Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6197587946975879Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6197587946975879Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6144788383Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6197587946975879Rat
2292616Ept15Estrogen-induced pituitary tumorigenesis QTL 154.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6144788383Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6197587946975879Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62661831486868070Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)620859430113082285Rat
2301964Bp323Blood pressure QTL 3234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6186868070Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6323998948239989Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6323998948239989Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62661831486868070Rat
1300128Rf16Renal function QTL 163.89renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6140163351Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)63093763275937632Rat
70199Coreg1Compensatory renal growth QTL 111.8kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)61459947363457687Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)61608937261967788Rat
1358190Ept1Estrogen-induced pituitary tumorigenesis QTL 14.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6144788383Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6323998948239989Rat
1359023Bp272Blood pressure QTL 2722.5arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)62228825732981219Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)62228825767288257Rat

Markers in Region
D6Rat39  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2620,338,777 - 20,338,915 (+)MAPPERmRatBN7.2
Rnor_6.0621,515,302 - 21,515,439NCBIRnor6.0
Rnor_5.0631,405,370 - 31,405,507UniSTSRnor5.0
Celera619,903,413 - 19,903,550UniSTS
RH 2.0 Map6179.7RGD
SHRSP x BN Map620.6398RGD
FHH x ACI Map620.5099RGD
Cytogenetic Map6q12UniSTS
D6Rat80  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8622,288,257 - 22,288,509 (+)Marker Load Pipeline
mRatBN7.2616,536,140 - 16,536,392 (-)MAPPERmRatBN7.2
Rnor_6.061,120,393 - 1,120,644NCBIRnor6.0
Rnor_5.061,111,498 - 1,111,749UniSTSRnor5.0
RGSC_v3.461,301,952 - 1,302,204RGDRGSC3.4
RGSC_v3.461,301,953 - 1,302,204UniSTSRGSC3.4
Celera616,183,547 - 16,183,798UniSTS
RGSC_v3.161,301,953 - 1,302,204RGD
RH 3.4 Map623.9UniSTS
RH 3.4 Map623.9RGD
RH 2.0 Map6122.3RGD
SHRSP x BN Map618.3999RGD
Cytogenetic Map6q11UniSTS
Cytogenetic Map6q14UniSTS
D6Rat150  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.269,843,312 - 9,843,484 (-)MAPPERmRatBN7.2
Rnor_6.068,083,222 - 8,083,393NCBIRnor6.0
Rnor_5.068,018,013 - 8,018,184UniSTSRnor5.0
RGSC_v3.468,184,790 - 8,184,962RGDRGSC3.4
RGSC_v3.468,184,791 - 8,184,962UniSTSRGSC3.4
Celera69,565,382 - 9,565,553UniSTS
Cytogenetic Map6q14UniSTS
RH139184  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2626,072,626 - 26,072,786 (+)MAPPERmRatBN7.2
Rnor_6.0627,473,248 - 27,473,407NCBIRnor6.0
Rnor_5.0637,285,372 - 37,285,531UniSTSRnor5.0
RGSC_v3.4626,058,154 - 26,058,313UniSTSRGSC3.4
Celera625,549,758 - 25,549,917UniSTS
RH 3.4 Map6119.4UniSTS
Cytogenetic Map6q14UniSTS
BE119303  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2626,092,738 - 26,092,895 (+)MAPPERmRatBN7.2
Rnor_6.0627,493,698 - 27,493,854NCBIRnor6.0
Rnor_5.0637,305,389 - 37,305,545UniSTSRnor5.0
RGSC_v3.4626,078,234 - 26,078,390UniSTSRGSC3.4
Celera625,569,901 - 25,570,057UniSTS
RH 3.4 Map6118.2UniSTS
Cytogenetic Map6q14UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 355 192 11 144 80 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000081278   ⟹   ENSRNOP00000069055
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl631,792,973 - 31,831,523 (-)Ensembl
mRatBN7.2 Ensembl626,072,648 - 26,111,314 (-)Ensembl
Rnor_6.0 Ensembl627,473,749 - 27,512,287 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000081323   ⟹   ENSRNOP00000074077
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl627,487,491 - 27,512,287 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000084344   ⟹   ENSRNOP00000073288
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl627,473,748 - 27,487,284 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000085937   ⟹   ENSRNOP00000073379
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl627,473,749 - 27,512,287 (-)Ensembl
RefSeq Acc Id: NM_001134754   ⟹   NP_001128226
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8631,792,972 - 31,831,170 (-)NCBI
mRatBN7.2626,073,127 - 26,111,326 (-)NCBI
Rnor_6.0627,473,748 - 27,512,287 (-)NCBI
Rnor_5.0637,285,872 - 37,323,978 (-)NCBI
RGSC_v3.4626,058,654 - 26,096,822 (-)RGD
Celera625,550,258 - 25,588,218 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001128226 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI68235 (Get FASTA)   NCBI Sequence Viewer  
  EDM02993 (Get FASTA)   NCBI Sequence Viewer  
  EDM02994 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000069055.3
RefSeq Acc Id: NP_001128226   ⟸   NM_001134754
- UniProtKB: B4F7D7 (UniProtKB/TrEMBL),   A0A0G2JUD4 (UniProtKB/TrEMBL),   A0A9K3Y7I0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000074077   ⟸   ENSRNOT00000081323
Ensembl Acc Id: ENSRNOP00000073379   ⟸   ENSRNOT00000085937
Ensembl Acc Id: ENSRNOP00000069055   ⟸   ENSRNOT00000081278
Ensembl Acc Id: ENSRNOP00000073288   ⟸   ENSRNOT00000084344

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K5C9-F1-model_v2 AlphaFold A0A0G2K5C9 1-394 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694470
Promoter ID:EPDNEW_R4990
Type:initiation region
Name:Selenoi_1
Description:selenoprotein I
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0627,512,302 - 27,512,362EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1560938 AgrOrtholog
BioCyc Gene G2FUF-38307 BioCyc
BioCyc Pathway PWY-7782 [plasmalogen biosynthesis] BioCyc
  PWY4FS-6 [phosphatidylethanolamine biosynthesis II] BioCyc
BioCyc Pathway Image PWY-7782 BioCyc
  PWY4FS-6 BioCyc
Ensembl Genes ENSRNOG00000059295 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000081278.3 UniProtKB/TrEMBL
Gene3D-CATH 1.20.120.1760 UniProtKB/TrEMBL
InterPro CDP-OH_P_trans UniProtKB/TrEMBL
  CDP-OH_PTrfase_TM_dom UniProtKB/TrEMBL
  CDP_ALCOHOL_P_TRANSF_CS UniProtKB/TrEMBL
  CHOPT UniProtKB/TrEMBL
KEGG Report rno:362713 UniProtKB/TrEMBL
NCBI Gene 362713 ENTREZGENE
PANTHER ETHANOLAMINEPHOSPHOTRANSFERASE 1 UniProtKB/TrEMBL
  PTHR10414 UniProtKB/TrEMBL
Pfam CDP-OH_P_transf UniProtKB/TrEMBL
PhenoGen Selenoi PhenoGen
PIRSF CHOPT UniProtKB/TrEMBL
PROSITE CDP_ALCOHOL_P_TRANSF UniProtKB/TrEMBL
RatGTEx ENSRNOG00000059295 RatGTEx
UniProt A0A0G2JUD4 ENTREZGENE
  A0A9K3Y7I0 ENTREZGENE, UniProtKB/TrEMBL
  B4F7D7 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A0G2JUD4 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-09-28 Selenoi  selenoprotein I  Ept1  ethanolaminephosphotransferase 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2015-03-04 Ept1  ethanolaminephosphotransferase 1  Ept1  ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2011-08-01 Ept1  ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)  Seli  selenoprotein I  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-02-28 Seli  selenoprotein I  RGD1560938_predicted  similar to mKIAA1724 protein (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1560938_predicted  similar to mKIAA1724 protein (predicted)  LOC362713  similar to mKIAA1724 protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC362713  similar to mKIAA1724 protein      Symbol and Name status set to provisional 70820 PROVISIONAL