Kiaa0825 (KIAA0825 homolog) - Rat Genome Database

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Gene: Kiaa0825 (KIAA0825 homolog) Rattus norvegicus
Analyze
Symbol: Kiaa0825
Name: KIAA0825 homolog
RGD ID: 1560883
Description: Orthologous to human KIAA0825 (KIAA0825); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: INFERRED
Previously known as: LOC100911144; LOC294603; RGD1560883; similar to KIAA0825 protein; uncharacterized LOC100911144; uncharacterized protein KIAA0825 homolog
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr828,606,257 - 9,167,308 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl28,606,281 - 9,167,180 (+)EnsemblGRCr8
mRatBN7.226,874,474 - 7,437,032 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl26,874,539 - 7,434,521 (+)EnsemblmRatBN7.2
Rnor_6.024,195,871 - 4,755,065 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl24,195,917 - 4,754,318 (+)Ensemblrn6Rnor6.0
Rnor_5.024,193,792 - 4,735,075 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.424,529,886 - 4,659,597 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera23,326,273 - 3,884,737 (+)NCBICelera
Cytogenetic Map2q11NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data
Kiaa0825
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr828,606,257 - 9,167,308 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl28,606,281 - 9,167,180 (+)EnsemblGRCr8
mRatBN7.226,874,474 - 7,437,032 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl26,874,539 - 7,434,521 (+)EnsemblmRatBN7.2
Rnor_6.024,195,871 - 4,755,065 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl24,195,917 - 4,754,318 (+)Ensemblrn6Rnor6.0
Rnor_5.024,193,792 - 4,735,075 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.424,529,886 - 4,659,597 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera23,326,273 - 3,884,737 (+)NCBICelera
Cytogenetic Map2q11NCBI
KIAA0825
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38594,150,851 - 94,618,604 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl594,150,851 - 94,618,604 (-)Ensemblhg38GRCh38
GRCh37593,486,556 - 93,954,309 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36593,880,919 - 93,980,040 (-)NCBIBuild 36Build 36hg18NCBI36
Celera589,346,774 - 89,816,202 (-)NCBICelera
Cytogenetic Map5q15NCBI
HuRef588,659,548 - 89,127,582 (-)NCBIHuRef
CHM1_1592,919,534 - 93,386,938 (-)NCBICHM1_1
T2T-CHM13v2.0594,634,907 - 95,102,987 (-)NCBIT2T-CHM13v2.0
2210408I21Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391377,283,636 - 77,761,904 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1377,283,659 - 77,761,903 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381377,135,531 - 77,613,785 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1377,135,540 - 77,613,784 (+)Ensemblmm10GRCm38
MGSCv371377,274,797 - 77,752,940 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361377,599,083 - 78,076,838 (+)NCBIMGSCv36mm8
Celera1379,463,325 - 79,920,002 (+)NCBICelera
Cytogenetic Map13C1NCBI
cM Map1340.98NCBI
Kiaa0825
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541817,851,078 - 17,995,990 (+)Ensembl
ChiLan1.0NW_00495541817,818,641 - 18,203,402 (+)NCBIChiLan1.0ChiLan1.0
KIAA0825
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2420,780,560 - 21,242,856 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1518,934,172 - 19,395,930 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0520,755,995 - 21,216,208 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1520,894,477 - 21,353,552 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl520,930,543 - 21,352,509 (+)EnsemblpanPan2panpan1.1
KIAA0825
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1314,868,609 - 15,251,247 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl314,893,203 - 15,249,730 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha316,207,450 - 16,588,002 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0314,796,918 - 15,135,637 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl314,796,091 - 15,134,307 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1314,711,657 - 15,011,407 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0314,710,159 - 15,090,916 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0314,913,859 - 15,296,241 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Kiaa0825
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213170,449,148 - 170,830,022 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365238,634,620 - 9,018,309 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365238,634,617 - 9,015,742 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIAA0825
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2100,934,429 - 101,194,563 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.12100,935,165 - 101,291,983 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22104,714,898 - 104,739,896 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KIAA0825
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1488,018,026 - 88,499,287 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl488,238,022 - 88,422,215 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366624023,272 - 104,913 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kiaa0825
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474313,155,786 - 13,327,950 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474312,945,095 - 13,327,509 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Kiaa0825
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v13217,873,504 - 218,256,517 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Kiaa0825
3707 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:114
Count of miRNA genes:89
Interacting mature miRNAs:102
Transcripts:ENSRNOT00000071535
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578664Bmd9Bone mineral QTL density 95femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)2573632550736325Rat
738010Lnnr3Liver neoplastic nodule remodeling QTL 32.94liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)2142977529Rat
9590080Insglur4Insulin/glucose ratio QTL 428.70.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)2615276751152767Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)24265106205135428Rat
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)27605533104774005Rat

Markers in Region
AU048302  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.227,310,054 - 7,310,202 (-)MAPPERmRatBN7.2
Rnor_6.024,716,045 - 4,716,192NCBIRnor6.0
Rnor_5.024,616,232 - 4,616,379UniSTSRnor5.0
RGSC_v3.424,999,991 - 5,000,138UniSTSRGSC3.4
Celera23,760,898 - 3,761,045UniSTS
Cytogenetic Map2q11UniSTS
RH134751  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.227,169,442 - 7,169,662 (+)MAPPERmRatBN7.2
Rnor_6.024,488,939 - 4,489,158NCBIRnor6.0
Rnor_5.024,483,360 - 4,483,579UniSTSRnor5.0
RGSC_v3.424,755,540 - 4,755,759UniSTSRGSC3.4
Celera23,618,612 - 3,618,831UniSTS
Cytogenetic Map2q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 83 59 6 347 183 11 144 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001419450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006223951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017591160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039103954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005501450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005501452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_590789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_599532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC111930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC113776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000071535   ⟹   ENSRNOP00000064885
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl28,606,281 - 8,919,847 (+)Ensembl
mRatBN7.2 Ensembl26,874,539 - 7,434,521 (+)Ensembl
Rnor_6.0 Ensembl24,252,496 - 4,444,836 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000093303   ⟹   ENSRNOP00000076185
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl28,606,315 - 8,901,664 (+)Ensembl
mRatBN7.2 Ensembl26,874,539 - 7,169,306 (+)Ensembl
Rnor_6.0 Ensembl24,195,917 - 4,754,318 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000110688   ⟹   ENSRNOP00000079404
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl28,606,281 - 8,901,664 (+)Ensembl
mRatBN7.2 Ensembl26,874,539 - 7,169,306 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000133632   ⟹   ENSRNOP00000102949
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl28,606,281 - 8,901,664 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000135014   ⟹   ENSRNOP00000107807
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl28,606,281 - 9,167,083 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000151022   ⟹   ENSRNOP00000100320
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl28,606,281 - 8,901,664 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000171610   ⟹   ENSRNOP00000111669
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl28,606,315 - 9,167,180 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000171855   ⟹   ENSRNOP00000105026
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl28,606,281 - 8,901,664 (+)Ensembl
RefSeq Acc Id: NM_001419450   ⟹   NP_001406379
RefSeq Status: INFERRED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,606,302 - 9,167,308 (+)NCBI
mRatBN7.226,874,507 - 7,435,650 (+)NCBI
RefSeq Acc Id: XM_017591153   ⟹   XP_017446642
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,606,257 - 9,166,834 (+)NCBI
mRatBN7.226,874,474 - 7,437,024 (+)NCBI
Rnor_6.024,195,891 - 4,755,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017591155   ⟹   XP_017446644
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,641,881 - 9,166,834 (+)NCBI
mRatBN7.226,914,400 - 7,437,024 (+)NCBI
Rnor_6.024,233,797 - 4,755,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017591156   ⟹   XP_017446645
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,606,257 - 8,905,921 (+)NCBI
mRatBN7.226,874,474 - 7,175,028 (+)NCBI
Rnor_6.024,195,891 - 4,494,524 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017591157   ⟹   XP_017446646
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,606,275 - 9,166,834 (+)NCBI
mRatBN7.226,874,480 - 7,437,025 (+)NCBI
Rnor_6.024,195,871 - 4,755,065 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017591158   ⟹   XP_017446647
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,606,257 - 9,166,834 (+)NCBI
mRatBN7.226,874,474 - 7,437,025 (+)NCBI
Rnor_6.024,195,891 - 4,755,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039103950   ⟹   XP_038959878
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,664,786 - 9,166,834 (+)NCBI
mRatBN7.226,932,987 - 7,437,026 (+)NCBI
RefSeq Acc Id: XM_039103951   ⟹   XP_038959879
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,709,610 - 9,166,834 (+)NCBI
mRatBN7.226,978,181 - 7,437,027 (+)NCBI
RefSeq Acc Id: XM_039103952   ⟹   XP_038959880
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,735,859 - 9,166,834 (+)NCBI
mRatBN7.227,004,011 - 7,437,027 (+)NCBI
RefSeq Acc Id: XM_039103953   ⟹   XP_038959881
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,606,257 - 8,777,312 (+)NCBI
mRatBN7.226,874,474 - 7,045,515 (+)NCBI
RefSeq Acc Id: XM_039103954   ⟹   XP_038959882
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,753,490 - 9,166,834 (+)NCBI
mRatBN7.227,021,684 - 7,437,032 (+)NCBI
RefSeq Acc Id: XM_063281460   ⟹   XP_063137530
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,641,880 - 9,166,834 (+)NCBI
RefSeq Acc Id: XM_063281461   ⟹   XP_063137531
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,606,257 - 8,905,921 (+)NCBI
RefSeq Acc Id: XM_063281463   ⟹   XP_063137533
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,606,257 - 9,166,834 (+)NCBI
RefSeq Acc Id: XM_063281464   ⟹   XP_063137534
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,606,257 - 8,905,921 (+)NCBI
RefSeq Acc Id: XM_063281465   ⟹   XP_063137535
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,606,277 - 9,166,834 (+)NCBI
RefSeq Acc Id: XM_063281466   ⟹   XP_063137536
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,606,257 - 8,905,921 (+)NCBI
RefSeq Acc Id: XM_063281467   ⟹   XP_063137537
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,606,275 - 8,905,921 (+)NCBI
RefSeq Acc Id: XM_063281468   ⟹   XP_063137538
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,606,257 - 8,772,559 (+)NCBI
RefSeq Acc Id: XM_063281469   ⟹   XP_063137539
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,641,879 - 8,686,790 (+)NCBI
RefSeq Acc Id: XR_005501450
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,606,257 - 8,779,791 (+)NCBI
mRatBN7.226,874,474 - 7,047,994 (+)NCBI
RefSeq Acc Id: XR_005501452
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr828,606,257 - 8,757,911 (+)NCBI
mRatBN7.226,874,474 - 7,026,111 (+)NCBI
RefSeq Acc Id: XP_017446646   ⟸   XM_017591157
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_017446642   ⟸   XM_017591153
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017446647   ⟸   XM_017591158
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_017446645   ⟸   XM_017591156
- Peptide Label: isoform X2
- UniProtKB: A0A8I6G599 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017446644   ⟸   XM_017591155
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSRNOP00000076185   ⟸   ENSRNOT00000093303
Ensembl Acc Id: ENSRNOP00000064885   ⟸   ENSRNOT00000071535
RefSeq Acc Id: XP_038959881   ⟸   XM_039103953
- Peptide Label: isoform X15
RefSeq Acc Id: XP_038959878   ⟸   XM_039103950
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038959879   ⟸   XM_039103951
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038959880   ⟸   XM_039103952
- Peptide Label: isoform X13
RefSeq Acc Id: XP_038959882   ⟸   XM_039103954
- Peptide Label: isoform X16
Ensembl Acc Id: ENSRNOP00000079404   ⟸   ENSRNOT00000110688
RefSeq Acc Id: NP_001406379   ⟸   NM_001419450
- UniProtKB: M0R647 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063137533   ⟸   XM_063281463
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063137534   ⟸   XM_063281464
- Peptide Label: isoform X7
RefSeq Acc Id: XP_063137531   ⟸   XM_063281461
- Peptide Label: isoform X5
- UniProtKB: A0A1W2Q691 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063137536   ⟸   XM_063281466
- Peptide Label: isoform X10
RefSeq Acc Id: XP_063137538   ⟸   XM_063281468
- Peptide Label: isoform X14
RefSeq Acc Id: XP_063137537   ⟸   XM_063281467
- Peptide Label: isoform X11
RefSeq Acc Id: XP_063137535   ⟸   XM_063281465
- Peptide Label: isoform X8
RefSeq Acc Id: XP_063137539   ⟸   XM_063281469
- Peptide Label: isoform X17
RefSeq Acc Id: XP_063137530   ⟸   XM_063281460
- Peptide Label: isoform X3
Ensembl Acc Id: ENSRNOP00000100320   ⟸   ENSRNOT00000151022
Ensembl Acc Id: ENSRNOP00000107807   ⟸   ENSRNOT00000135014
Ensembl Acc Id: ENSRNOP00000102949   ⟸   ENSRNOT00000133632
Ensembl Acc Id: ENSRNOP00000105026   ⟸   ENSRNOT00000171855
Ensembl Acc Id: ENSRNOP00000111669   ⟸   ENSRNOT00000171610

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZV85-F1-model_v2 AlphaFold D3ZV85 1-279 view protein structure
AF-A0A1W2Q691-F1-model_v2 AlphaFold A0A1W2Q691 1-1273 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13691047
Promoter ID:EPDNEW_R1565
Type:initiation region
Name:RGD1560883_1
Description:similar to KIAA0825 protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.024,195,936 - 4,195,996EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1560883 AgrOrtholog
BioCyc Gene G2FUF-55070 BioCyc
Ensembl Genes ENSRNOG00000045639 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000071535.3 UniProtKB/TrEMBL
  ENSRNOT00000093303 ENTREZGENE
  ENSRNOT00000093303.3 UniProtKB/TrEMBL
  ENSRNOT00000110688 ENTREZGENE
  ENSRNOT00000110688.2 UniProtKB/TrEMBL
  ENSRNOT00000133632.1 UniProtKB/TrEMBL
  ENSRNOT00000135014.1 UniProtKB/TrEMBL
  ENSRNOT00000151022 ENTREZGENE
  ENSRNOT00000151022.1 UniProtKB/TrEMBL
  ENSRNOT00000171610 ENTREZGENE
  ENSRNOT00000171610.1 UniProtKB/TrEMBL
  ENSRNOT00000171855.1 UniProtKB/TrEMBL
InterPro DUF4495 UniProtKB/TrEMBL
NCBI Gene 294603 ENTREZGENE
PANTHER PTHR33960 UniProtKB/TrEMBL
  SIMILAR TO KIAA0825 PROTEIN UniProtKB/TrEMBL
Pfam DUF4495 UniProtKB/TrEMBL
PhenoGen Kiaa0825 PhenoGen
RatGTEx ENSRNOG00000045639 RatGTEx
UniProt A0A1W2Q691 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6G599 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LB18_RAT UniProtKB/TrEMBL
  A0ABK0LC05_RAT UniProtKB/TrEMBL
  A0ABK0LL85_RAT UniProtKB/TrEMBL
  A0ABK0LNH1_RAT UniProtKB/TrEMBL
  A0ABK0LPS9_RAT UniProtKB/TrEMBL
  M0R647 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-19 Kiaa0825  KIAA0825 homolog  RGD1560883  similar to KIAA0825 protein  Symbol and Name Changed 1299863 APPROVED
2021-03-09 RGD1560883  similar to KIAA0825 protein  LOC100911144  uncharacterized LOC100911144  Data merged from RGD:6494670 737654 PROVISIONAL
2012-07-05 LOC100911144  uncharacterized LOC100911144      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-04-30 RGD1560883  similar to KIAA0825 protein   RGD1560883_predicted  similar to KIAA0825 protein (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1560883_predicted  similar to KIAA0825 protein (predicted)  LOC294603  similar to KIAA0825 protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC294603  similar to KIAA0825 protein      Symbol and Name status set to provisional 70820 PROVISIONAL