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Gene: Czib (CXXC motif containing zinc binding protein) Rattus norvegicus

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Symbol:

Czib

Name:

CXXC motif containing zinc binding protein

RGD ID:

1559786

Description:

Predicted to enable zinc ion binding activity. Orthologous to human CZIB (CXXC motif containing zinc binding protein); INTERACTS WITH 17beta-estradiol; 3-chloropropane-1,2-diol; bisphenol A.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

hypothetical protein LOC298384; MGC112851; RGD1559786; similar to RIKEN cDNA 0610037L13; UPF0587 protein C1orf123 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CZIB (CXXC motif containing zinc binding protein)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB
Mus musculus (house mouse):	Czib (CXXC motif containing zinc binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Czib (CXXC motif containing zinc binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CZIB (CXXC motif containing zinc binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CZIB (CXXC motif containing zinc binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Czib (CXXC motif containing zinc binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CZIB (CXXC motif containing zinc binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CZIB (CXXC motif containing zinc binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Czib (CXXC motif containing zinc binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Czib (CXXC motif containing zinc binding protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Czib (CXXC motif containing zinc binding protein)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	CZIB (CXXC motif containing zinc binding protein)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	czib (CXXC motif containing zinc binding protein)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	F46B6.12	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG4646	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	YCR090C	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Saccharomyces cerevisiae (baker's yeast):	YCR090C	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	czib	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	czib	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	127,875,408 - 127,885,100 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	127,877,173 - 127,886,538 (+)	Ensembl				GRCr8
mRatBN7.2	5	122,648,333 - 122,657,767 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	122,648,411 - 122,656,910 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	125,269,249 - 125,277,129 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	126,992,297 - 127,000,177 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	127,043,605 - 127,051,485 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	127,489,349 - 127,498,734 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	127,489,418 - 127,497,293 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	131,337,249 - 131,345,776 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	128,991,525 - 128,999,333 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	121,390,012 - 121,397,906 (+)	NCBI		Celera
Cytogenetic Map	5	q34	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

carnitine palmitoyltransferase II deficiency (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

3-chloropropane-1,2-diol (EXP)

4-hydroxyphenyl retinamide (ISO)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

atrazine (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (ISO)

Bisphenol B (ISO)

bisphenol F (ISO)

diarsenic trioxide (ISO)

diethylstilbestrol (ISO)

fenvalerate (EXP)

folic acid (ISO)

ivermectin (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methamphetamine (EXP)

resveratrol (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

thapsigargin (EXP)

triptonide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

Molecular Function

metal ion binding (IEA)

protein binding (ISO)

zinc ion binding (IBA,IEA,ISO,ISS)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
4.	Comprehensive gene review and curation	RGD comprehensive gene curation
5.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:15489334	PMID:23376485	PMID:30260988	PMID:30280012

Genomics

Comparative Map Data

Czib
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	127,875,408 - 127,885,100 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	127,877,173 - 127,886,538 (+)	Ensembl				GRCr8
mRatBN7.2	5	122,648,333 - 122,657,767 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	122,648,411 - 122,656,910 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	125,269,249 - 125,277,129 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	126,992,297 - 127,000,177 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	127,043,605 - 127,051,485 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	127,489,349 - 127,498,734 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	127,489,418 - 127,497,293 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	131,337,249 - 131,345,776 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	128,991,525 - 128,999,333 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	121,390,012 - 121,397,906 (+)	NCBI		Celera
Cytogenetic Map	5	q34	NCBI

CZIB
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	53,214,099 - 53,220,634 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	53,214,099 - 53,220,652 (-)	Ensembl			hg38	GRCh38
GRCh37	1	53,679,771 - 53,686,306 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	53,452,359 - 53,458,877 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	1	51,967,614 - 51,974,132 (-)	NCBI		Celera
Cytogenetic Map	1	p32.3	NCBI
HuRef	1	51,795,425 - 51,801,943 (-)	NCBI		HuRef
CHM1_1	1	53,796,766 - 53,803,284 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	53,095,535 - 53,102,070 (-)	NCBI		T2T-CHM13v2.0

Czib
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	107,746,982 - 107,755,000 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	107,747,010 - 107,756,581 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	107,889,785 - 107,897,803 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	107,889,813 - 107,899,384 (+)	Ensembl			mm10	GRCm38
MGSCv37	4	107,562,504 - 107,570,407 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	107,387,831 - 107,395,734 (+)	NCBI		MGSCv36	mm8
Celera	4	106,238,782 - 106,246,719 (+)	NCBI		Celera
Cytogenetic Map	4	C7	NCBI
cM Map	4	50.18	NCBI

Czib
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955464	5,930,805 - 5,937,061 (+)	Ensembl
ChiLan1.0	NW_004955464	5,930,805 - 5,937,061 (+)	NCBI	ChiLan1.0	ChiLan1.0

CZIB
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	173,617,077 - 173,623,635 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	172,754,312 - 172,764,395 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	52,487,068 - 52,493,655 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	54,086,896 - 54,093,445 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	54,086,896 - 54,093,445 (-)	Ensembl			panPan2	panpan1.1

CZIB
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	55,701,648 - 55,709,698 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	55,701,674 - 55,708,468 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	55,767,829 - 55,775,895 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	55,890,633 - 55,898,802 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	55,890,676 - 55,899,698 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	55,883,668 - 55,891,663 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	55,773,566 - 55,782,634 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	56,163,616 - 56,171,689 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Czib
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	67,565,341 - 67,572,217 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936522	7,844,142 - 7,850,953 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CZIB
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	159,002,627 - 159,018,999 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	6	159,002,581 - 159,018,247 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	146,666,533 - 146,682,171 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CZIB
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	79,703,741 - 79,710,737 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	79,703,800 - 79,712,432 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666033	37,572,076 - 37,579,851 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Czib
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624934	1,236,406 - 1,245,768 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624934	1,236,366 - 1,269,480 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Czib
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	46,933,812 - 46,943,166 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Czib
71 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	355
Count of miRNA genes:	204
Interacting mature miRNAs:	235
Transcripts:	ENSRNOT00000065275
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331796	Thshl2	Thyroid stimulating hormone level QTL 2	2.3		blood thyroid-stimulating hormone amount (VT:0005119)	serum thyroid stimulating hormone level (CMO:0001248)	5	102105698	152749382	Rat
2303586	Gluco52	Glucose level QTL 52	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	100826632	145826632	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	44924861	153890773	Rat
8552960	Pigfal15	Plasma insulin-like growth factor 1 level QTL 15			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	116702075	161702075	Rat
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	38207390	136631402	Rat
1298070	Scl18	Serum cholesterol level QTL 18	3.7		blood LDL cholesterol amount (VT:0000181)	calculated plasma low density lipoprotein cholesterol level (CMO:0001245)	5	84630798	129630798	Rat
61452	Ciaa5	CIA Autoantibody QTL 5	3.5		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	5	99905133	172190305	Rat
1331801	Rf33	Renal function QTL 33	4.149		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	48523123	134369373	Rat
1582230	Bw78	Body weight QTL 78	3.2	0.0016	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	5	124314582	133270832	Rat
7411582	Foco3	Food consumption QTL 3	7.5	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	5	92583776	137583776	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	65089051	166764498	Rat
1598859	Cm66	Cardiac mass QTL 66	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	84630798	129630798	Rat
7207486	Bss109	Bone structure and strength QTL 109			femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	5	112142946	157142946	Rat
7207481	Bss106	Bone structure and strength QTL 106	7.9		femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	5	112142946	157142946	Rat
1302790	Scl20	Serum cholesterol level QTL 20	6.4	0.0001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	110770739	155770739	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	51657967	166600247	Rat
1549838	Bss4	Bone structure and strength QTL 4	9.2		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	5	112142946	157142946	Rat
7411564	Bw135	Body weight QTL 135		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	92583776	137583776	Rat
1581510	Cm54	Cardiac mass QTL 54	3.4	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	5	125969677	172190305	Rat
8657050	Bw146	Body weight QTL 146	19.84	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	98972960	143972960	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55124766	172190305	Rat
7411601	Foco12	Food consumption QTL 12	19.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	5	92583776	137583776	Rat
2303618	Vencon1	Ventilatory control QTL 1	3.8		respiration trait (VT:0001943)	oxygen consumption (CMO:0002169)	5	100826632	145826632	Rat
2317056	Wbc3	White blood cell count QTL 3	2.51	0.01	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	5	111236572	156236572	Rat
1598846	Bp293	Blood pressure QTL 293	3.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	84630798	129630798	Rat
7394710	Emca12	Estrogen-induced mammary cancer QTL 12			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	94034903	139034903	Rat
1598847	Cm62	Cardiac mass QTL 62	3.4		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	114131300	159131300	Rat
2293642	Bss37	Bone structure and strength QTL 37	4.64	0.0001	femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	5	125969677	156302135	Rat
1358909	Kidm25	Kidney mass QTL 25	1.87		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	5	95062526	133270832	Rat
70189	Mcs5	Mammary carcinoma susceptibility QTL 5	10.51		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	60601597	137492949	Rat
8694441	Bw169	Body weight QTL 169	17.61	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	5	116702075	161702075	Rat
7207488	Bss110	Bone structure and strength QTL 1	8.4		femur strength trait (VT:0010010)	femur stiffness (CMO:0001674)	5	112142946	157142946	Rat
7207491	Bss112	Bone structure and strength QTL 112	7		femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	5	112142946	157142946	Rat
8694389	Bw160	Body weight QTL 160	6.17	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	5	116702075	161702075	Rat
1354598	Srn6	Serum renin concentration QTL 6	3.8		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	5	74335621	156302135	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	36460764	136631402	Rat
8694198	Abfw3	Abdominal fat weight QTL 3	16.13	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	5	116702075	161702075	Rat
1298086	Bp156	Blood pressure QTL 156			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	89369373	134369373	Rat
2306971	Anxrr21	Anxiety related response QTL 21	9.47		fear/anxiety-related behavior trait (VT:1000241)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	5	70969494	136328156	Rat
1298089	Scl14	Serum cholesterol level QTL 14	5.8	0.0004	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	114131300	159131300	Rat
1358895	Bp254	Blood pressure QTL 254	3.6	0.0003	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	5	97492524	133270832	Rat
1358889	Bp261	Blood pressure QTL 261	2.86		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	5	95062526	133270832	Rat
6903316	Bw113	Body weight QTL 113	2	0.0103	body mass (VT:0001259)	body weight (CMO:0000012)	5	92881678	137881678	Rat
1358187	Emca1	Estrogen-induced mammary cancer QTL 1	4.4		mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	5	104262817	153890625	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	91	59	6	355	191	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001034132	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238509	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763867	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC100100	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000065275 ⟹ ENSRNOP00000058861

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	127,877,205 - 127,885,216 (+)	Ensembl
mRatBN7.2 Ensembl	5	122,648,432 - 122,656,910 (+)	Ensembl
Rnor_6.0 Ensembl	5	127,489,418 - 127,497,293 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095474 ⟹ ENSRNOP00000086514

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	127,877,320 - 127,886,538 (+)	Ensembl
mRatBN7.2 Ensembl	5	122,648,547 - 122,656,910 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096780 ⟹ ENSRNOP00000091371

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	127,877,173 - 127,886,538 (+)	Ensembl
mRatBN7.2 Ensembl	5	122,649,105 - 122,656,910 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099453 ⟹ ENSRNOP00000083577

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	127,877,205 - 127,883,999 (+)	Ensembl
mRatBN7.2 Ensembl	5	122,648,411 - 122,655,226 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000104267 ⟹ ENSRNOP00000086541

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	127,877,205 - 127,882,329 (+)	Ensembl
mRatBN7.2 Ensembl	5	122,648,411 - 122,653,556 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000107839 ⟹ ENSRNOP00000078920

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	127,877,208 - 127,886,538 (+)	Ensembl
mRatBN7.2 Ensembl	5	122,648,672 - 122,656,910 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116515 ⟹ ENSRNOP00000082828

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	127,877,205 - 127,882,922 (+)	Ensembl
mRatBN7.2 Ensembl	5	122,648,411 - 122,654,149 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117405 ⟹ ENSRNOP00000076666

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	127,877,614 - 127,885,099 (+)	Ensembl
mRatBN7.2 Ensembl	5	122,648,411 - 122,656,896 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000153167 ⟹ ENSRNOP00000100321

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	127,877,278 - 127,882,919 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000173602 ⟹ ENSRNOP00000105173

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	127,877,278 - 127,883,999 (+)	Ensembl

RefSeq Acc Id:

NM_001034132 ⟹ NP_001029304

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	127,877,224 - 127,885,100 (+)	NCBI
mRatBN7.2	5	122,648,451 - 122,656,327 (+)	NCBI
Rnor_6.0	5	127,489,418 - 127,497,294 (+)	NCBI
Rnor_5.0	5	131,337,249 - 131,345,776 (+)	NCBI
RGSC_v3.4	5	128,991,525 - 128,999,333 (+)	RGD
Celera	5	121,390,012 - 121,397,906 (+)	RGD

Sequence:

show sequence

CAGCTGTCGCAGTAGTATAACGTGGACGAGCAGCTATGGGGAAAATCGCACTTCAGCTCAAAGC
CACACTGGAGAACGTCACGAACCTTCGGCCAGTGGGCGAAGACTTCCGGTGGTACCTCAAGATG
AAATGTGGCAACTGTGGTGAGATTTCAGAGAAGTGGCAATATATCCGGCTGATGGACAGTGTGG
CGCTGAAAGGAGGCCGAGGCAGTGCCTCCATGGTCCAGAAGTGCAAGCTGTGTGCACGGGAGAA
CTCTATTGAAATTCTGAGCAGCACCATCAAGTCTTACAATGCAGAAGACAACGAGAAGTTCAAG
ACAATAGTAGAGTTTGAGTGCCGGGGCCTTGAACCAGTTGACTTCCAGCCCCAGGCTGGGTTTG
CTGCTGAAGGTGTGGAGTCAGGGACAGTCTTCAGTGACATCAATCTGCAAGAAAAGGACTGGAC
AGACTATGATGAGAAGACTCAGGAGTCTGTGGGGATCTTTGAAGTCACCCATCAGTTTGTGAAG
TGCTGAACTCTCTGCCTGCACACCTGCCTATAAGAACAGAGACAGAGCTCCCTGAGCAGCAGTT
CCCATGGAGGCTTCTAGCTCTGCTTTCCCAGCACCTGTACCAAGCCCTCACAGTCTGCATGCCA
GGGCTAGCCACAGTTCTGAGTCCCACCAATAAAGCCCCTGTTGGTGCCGCAGTGGTATGTGAAG
GTGGTCTGAGCAGTACTTCTCCACAGATAAGAATGAATTCCGGAGGCCTTTGCTTTCTAATCCT
ACTCTGTACCGGATCCAGTTTGCACACAGCTTAAATAAAGTCTCTCCAGCTCTTAAGAAATAGG
CAGGCCAGCCTACAGGATCAAAGGCGTGAGAGCCAGTGGCACAAAGGCAGAGAAGCCAATGGAG
TGCTGCTGTGAACCCAGTAGCTCCAAACTAAAACACTCCTGAGCACATGGTTCTCCAGTGAACC
CAGGTATCTGTCAGCTGCTCATTTCACACCCAGAGTCCACTCCAGAGACCAGCAGCCCACCGCT
GGCCCATTCTGTCCACGTCACAAAATCCCTGGCTAATGGCTCTGTTCACTTGCTGTGATAGAGT
ACTTCCTGTCAGAGTCAACATCAAAGTCTTCCCTGTGATCAGCCTCTGCGTCCCCTGAAGCACC
TCTTCCTGGTCCCAACTTATCTCCTGTTCTGCTTCCAGCCAGCTCTCGGAGTGAAGACCGCAAT
CATGGTCCACTGAGTCTCGTGGAACCGAAGATCCCCACACAGCAGACAGAGCTGTGAGTGCAGG
CAATGAGTATGCTGTGCCTTCATACTTGGGGAACCACCATTTGGAAAAACTGTTTCCACACACA
TTTCTCCAGTACTCTACTGGAGAAAAGAAAGATTGTATTTTTAATTGTGCAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_008763867 ⟹ XP_008762089

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	127,877,573 - 127,885,098 (+)	NCBI
mRatBN7.2	5	122,648,816 - 122,657,767 (+)	NCBI
Rnor_6.0	5	127,489,799 - 127,498,734 (+)	NCBI

Sequence:

show sequence

GGAGGCGGTGGGCATTTTAGAGCTCAGGGCCAATCCATGATCTCTGTGTTGAATTGGGAGCCTT
TCTGTTCTTTAGGGTCTGAGATGAAATGTGGCAACTGTGGTGAGATTTCAGAGAAGTGGCAATA
TATCCGGCTGATGGACAGTGTGGCGCTGAAAGGAGGCCGAGGCAGTGCCTCCATGGTCCAGAAG
TGCAAGCTGTGTGCACGGGAGAACTCTATTGAAATTCTGAGCAGCACCATCAAGTCTTACAATG
CAGAAGACAACGAGAAGTTCAAGACAATAGTAGAGTTTGAGTGCCGGGGCCTTGAACCAGTTGA
CTTCCAGCCCCAGGCTGGGTTTGCTGCTGAAGGTGTGGAGTCAGGGACAGTCTTCAGTGACATC
AATCTGCAAGAAAAGGACTGGACAGACTATGATGAGAAGACTCAGGAGTCTGTGGGGATCTTTG
AAGTCACCCATCAGTTTGTGAAGTGCTGAACTCTCTGCCTGCACACCTGCCTATAAGAACAGAG
ACAGAGCTCCCTGAGCAGCAGTTCCCATGGAGGCTTCTAGCTCTGCTTTCCCAGCACCTGTACC
AAGCCCTCACAGTCTGCATGCCAGGGCTAGCCACAGTTCTGAGTCCCACCAATAAAGCCCCTGT
TGGTGCCGCAGTGGTATGTGAAGGTGGTCTGAGCAGTACTTCTCCACAGATAAGAATGAATTCC
GGAGGCCTTTGCTTTCTAATCCTACTCTGTACCGGATCCAGTTTGCACACAGCTTAAATAAAGT
CTCTCCAGCTCTTAAGAAATAGGCAGGCCAGCCTACAGGATCAAAGGCGTGAGAGCCAGTGGCA
CAAAGGCAGAGAAGCCAATGGAGTGCTGCTGTGAACCCAGTAGCTCCAAACTAAAACACTCCTG
AGCACATGGTTCTCCAGTGAACCCAGGTATCTGTCAGCTGCTCATTTCACACCCAGAGTCCACT
CCAGAGACCAGCAGCCCACCGCTGGCCCATTCTGTCCACGTCACAAAATCCCTGGCTAATGGCT
CTGTTCACTTGCTGTGATAGAGTACTTCCTGTCAGAGTCAACATCAAAGTCTTCCCTGTGATCA
GCCTCTGCGTCCCCTGAAGCACCTCTTCCTGGTCCCAACTTATCTCCTGTTCTGCTTCCAGCCA
GCTCTCGGAGTGAAGACCGCAATCATGGTCCACTGAGTCTCGTGGAACCGAAGATCCCCACACA
GCAGACAGAGCTGTGAGTGCAGGCAATGAGTATGCTGTGCCTTCATACTTGGGGAACCACCATT
TGGAAAAACTGTTTCCACACACATTTCTCCAGTACTCTACTGGAGAAAAGAAAGATTGTATTTT
TAATTGTGCATACTTGTGTGTATTTATGTGTAGCATAAGTACTGGTACCCTTGGGGACCAAAAG
AGGATGTCATGTCCCTTAGAGCTGGAGTTACAGGCTATTGTGACCCACCCATTGTGGATCCTAG
GAACCAACTCGGGTCTTCTGCAAGAGCATTGTGTGCTCTTAACTGCTGAGCCATCTCCTCTGTA
GCCCATGGTTTCCCACTTCTGAGAGTAGAAAAGGGCCTGCCGTCCTCAGGCTGGTTGAGAGGGT
CTAACGGAGTTGGCAAACTGGCCACATCTAAGAAAGGTAGGAAGGTGCCTGCTTTTCCTCCCTT
CTAGTCTGGCAAGCATGTTGTGTATACTAAGCCCCCTGGAGAAGTTTGGTCTGGGTCTTCTAGT
CCCATGGGGGTGTCTAAAGAGAGACCCAGGGAGAGGAAGGAGGAGGGGCGTGCCACGGGAAGGT
GGTTCGTGAGCGCACAGCCAGGAGGCCCACCTGCTGGAGTAGGAGTGACCCAGGCAGAACATGC
AAGTGAGACCTTGGGGTGGCTGAGCAGCATAGAGGGGTTGACATCTGCCCAGCTCTCATGATTT
AAAGCTTATTAGAATGTAAAGGCTTTGTGTCTTTTATTTGGGGACTAAATGATCCAAGATGAAG
TAGAAACCCCTAATATTTACTGCAACAGCCCTGTTTCTTGCTTCTGTGACTGAGCCTTCCTCAA
GGCTGTCTCTCACCCACCAGGCCCAAGCCAGTCTACCCCAGCAGCAAGCCGGTGGCTCTGGACT
TGGGAAGTAGCTTTTCTTGTTTCTAGACTCTTCAGCCAGTGTGTGTTAAGTTCATGAAATCTCT
CCTGGTTGAAGAAGTAGTCATCAAGAAGTCAAATAGATTATGCAGACAGGAAATACTCAATACC
TATTTAACCAAAACAGCAACAAAGAAGCCCTTGACAGACCAAGATTTAGGAGAAAGCCAAGAGC
AGTGCTGTGTTTATGAGTGAGGAAAGGTTGGGGTGCTGAGGACTCCCCATCACTGCTTCTGTTG
TTTTGCTGGGTCCCATCAGTGTGATAAGAGAAAAAAAGATGAAAAGAGGAAAGAACGAAGAAAG
TTCAGCAGAGTTCAGAGGTGCTGTTAGATTTAAGGTCTGTGAGGAATCAAGGGCATTTCAATTA
ATTGACAAGCAAAATTTCAAGAAAAGATGCCTTTTATAGTAGCAGCCTAGGGTGGGGTGTCTCT
CAGGGACAGAGCACTTACAGAACATGGGAGATTCAAGGACCACAAAGAAATATAACAGCGAGAA
AACATACCTGCTTCCCCAAACTAACAAGGGTTTAATCTCAAAGAAATCTATAACTGGAGAATAC
TAGTAAGTTTCACTAAAAGTCATGAAAAACCTATGTTATTATAGATAGACAATGTTCAACCAGA
CACCCATTTTCAAAAACTTTATAAATTTAATTGAAATCGCAA

hide sequence

RefSeq Acc Id:

XM_063287396 ⟹ XP_063143466

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	127,875,408 - 127,885,098 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001029304	(Get FASTA)	NCBI Sequence Viewer
	XP_008762089	(Get FASTA)	NCBI Sequence Viewer
	XP_063143466	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI00101	(Get FASTA)	NCBI Sequence Viewer
	EDL90419	(Get FASTA)	NCBI Sequence Viewer
	EDL90420	(Get FASTA)	NCBI Sequence Viewer
	EDL90421	(Get FASTA)	NCBI Sequence Viewer
	EDL90422	(Get FASTA)	NCBI Sequence Viewer
	EDL90423	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000058861
	ENSRNOP00000058861.1
	ENSRNOP00000076666
	ENSRNOP00000086541
GenBank Protein	Q498R7	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001029304 ⟸ NM_001034132
- UniProtKB:	Q498R7 (UniProtKB/Swiss-Prot), A6JYT0 (UniProtKB/TrEMBL), A0A8I6A651 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGKIALQLKATLENVTNLRPVGEDFRWYLKMKCGNCGEISEKWQYIRLMDSVALKGGRGSASMV QKCKLCARENSIEILSSTIKSYNAEDNEKFKTIVEFECRGLEPVDFQPQAGFAAEGVESGTVFS DINLQEKDWTDYDEKTQESVGIFEVTHQFVKC hide sequence

RefSeq Acc Id:	XP_008762089 ⟸ XM_008763867
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AR96 (UniProtKB/TrEMBL)
- Sequence:	show sequence MISVLNWEPFCSLGSEMKCGNCGEISEKWQYIRLMDSVALKGGRGSASMVQKCKLCARENSIEI LSSTIKSYNAEDNEKFKTIVEFECRGLEPVDFQPQAGFAAEGVESGTVFSDINLQEKDWTDYDE KTQESVGIFEVTHQFVKC hide sequence

Ensembl Acc Id:

ENSRNOP00000058861 ⟸ ENSRNOT00000065275

Ensembl Acc Id:

ENSRNOP00000076666 ⟸ ENSRNOT00000117405

Ensembl Acc Id:

ENSRNOP00000086541 ⟸ ENSRNOT00000104267

Ensembl Acc Id:

ENSRNOP00000086514 ⟸ ENSRNOT00000095474

Ensembl Acc Id:

ENSRNOP00000083577 ⟸ ENSRNOT00000099453

Ensembl Acc Id:

ENSRNOP00000082828 ⟸ ENSRNOT00000116515

Ensembl Acc Id:

ENSRNOP00000078920 ⟸ ENSRNOT00000107839

Ensembl Acc Id:

ENSRNOP00000091371 ⟸ ENSRNOT00000096780

RefSeq Acc Id:	XP_063143466 ⟸ XM_063287396
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6A5J0 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000105173 ⟸ ENSRNOT00000173602

Ensembl Acc Id:

ENSRNOP00000100321 ⟸ ENSRNOT00000153167

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q498R7-F1-model_v2	AlphaFold	Q498R7	1-160	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693895

Promoter ID:

EPDNEW_R4420

Type:

initiation region

Name:

RGD1559786_1

Description:

similar to RIKEN cDNA 0610037L13

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	127,489,426 - 127,489,486	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1559786	AgrOrtholog
BioCyc Gene	G2FUF-40404	BioCyc
Ensembl Genes	ENSRNOG00000012724	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000065275	ENTREZGENE
	ENSRNOT00000065275.2	UniProtKB/Swiss-Prot
	ENSRNOT00000104267	ENTREZGENE
	ENSRNOT00000117405	ENTREZGENE
IMAGE_CLONE	IMAGE:7376782	IMAGE-MGC_LOAD
InterPro	CXXC_Zn_binding_euk	UniProtKB/Swiss-Prot
KEGG Report	rno:298384	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:112851	IMAGE-MGC_LOAD
NCBI Gene	298384	ENTREZGENE
PANTHER	CXXC MOTIF CONTAINING ZINC BINDING PROTEIN	UniProtKB/Swiss-Prot
	PTHR12857	UniProtKB/Swiss-Prot
Pfam	DUF866	UniProtKB/Swiss-Prot
PhenoGen	Czib	PhenoGen
RatGTEx	ENSRNOG00000012724	RatGTEx
Superfamily-SCOP	MAL13P1.257-like	UniProtKB/Swiss-Prot
UniProt	A0A8I5Y097_RAT	UniProtKB/TrEMBL
	A0A8I5ZLQ2_RAT	UniProtKB/TrEMBL
	A0A8I5ZVP1_RAT	UniProtKB/TrEMBL
	A0A8I5ZX79_RAT	UniProtKB/TrEMBL
	A0A8I6A5J0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A651	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AR96	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LFR6_RAT	UniProtKB/TrEMBL
	A0ABK0LUC9_RAT	UniProtKB/TrEMBL
	A6JYT0	ENTREZGENE, UniProtKB/TrEMBL
	CZIB_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-11-09	Czib	CXXC motif containing zinc binding protein	RGD1559786	similar to RIKEN cDNA 0610037L13	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-30	RGD1559786	similar to RIKEN cDNA 0610037L13	MGC112851		Symbol updated	1299863	APPROVED
2006-02-09	MGC112851	similar to RIKEN cDNA 0610037L13			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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