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Gene: Akap3 (A-kinase anchoring protein 3) Rattus norvegicus

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Symbol:

Akap3

Name:

A-kinase anchoring protein 3

RGD ID:

1359735

Description:

Predicted to enable protein kinase A binding activity. Predicted to be involved in several processes, including cell surface receptor protein serine/threonine kinase signaling pathway; establishment of protein localization; and flagellated sperm motility. Predicted to act upstream of or within blastocyst hatching. Predicted to be located in acrosomal vesicle and sperm midpiece. Predicted to be active in cytoplasm; sperm fibrous sheath; and sperm principal piece. Human ortholog(s) of this gene implicated in spermatogenic failure 82. Orthologous to human AKAP3 (A-kinase anchoring protein 3); PARTICIPATES IN protein kinase A (PKA) signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3,7-dihydropurine-6-thione; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

A kinase (PRKA) anchor protein 3; A-kinase anchor protein 3; MGC93915

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	AKAP3 (A-kinase anchoring protein 3)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, Panther
Mus musculus (house mouse):	Akap3 (A kinase anchor protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Akap3 (A-kinase anchoring protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	AKAP3 (A-kinase anchoring protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	AKAP3 (A-kinase anchoring protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Akap3 (A-kinase anchoring protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	AKAP3 (A-kinase anchoring protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	AKAP3 (A-kinase anchoring protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Akap3 (A-kinase anchoring protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Akap3 (A-kinase anchoring protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	AKAP3 (A-kinase anchoring protein 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Akap3 (A kinase anchor protein 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	161,374,198 - 161,400,062 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	161,374,407 - 161,400,230 (+)	Ensembl				GRCr8
mRatBN7.2	4	159,688,049 - 159,714,067 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	159,699,289 - 159,713,903 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	165,921,691 - 165,943,705 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	161,704,598 - 161,726,610 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	160,338,631 - 160,360,645 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	159,399,686 - 159,425,512 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	159,403,501 - 159,425,629 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	232,187,481 - 232,213,270 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	163,241,422 - 163,263,433 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	148,408,052 - 148,430,063 (+)	NCBI		Celera
RGSC_v3.1	4	163,486,357 - 163,508,368 (+)	NCBI
Cytogenetic Map	4	q42	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

spermatogenic failure 82 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,7-dihydropurine-6-thione (EXP)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

arsane (EXP)

arsenic atom (EXP)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

C60 fullerene (EXP)

diarsenic trioxide (ISO)

fenvalerate (EXP)

iron dichloride (ISO)

lead nitrate (EXP)

mercaptopurine (EXP)

pirinixic acid (ISO)

purine-6-thiol (EXP)

rotenone (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (EXP)

sodium fluoride (ISO)

T-2 toxin (ISO)

triptonide (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

blastocyst hatching (ISO)

cell surface receptor protein serine/threonine kinase signaling pathway (IBA,ISO)

establishment of protein localization (IEA,ISO)

flagellated sperm motility (IEA,ISO)

intracellular protein localization (IBA,ISO)

Cellular Component

acrosomal vesicle (IEA,ISO)

cytoplasm (IBA)

motile cilium (IEA,ISO)

sperm fibrous sheath (IEA,ISO)

sperm flagellum (IEA,ISO)

sperm midpiece (IEA,ISO)

sperm principal piece (IBA,IEA,ISO)

Molecular Function

protein binding (ISO)

protein kinase A binding (IBA,IEA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

protein kinase A (PKA) signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	A-kinase anchoring protein 4 binding proteins in the fibrous sheath of the sperm flagellum.	Brown PR, etal., Biol Reprod 2003 Jun;68(6):2241-8. Epub 2003 Jan 22.
2.	A-kinase anchoring proteins: from protein complexes to physiology and disease.	Carnegie GK, etal., IUBMB Life. 2009 Apr;61(4):394-406.
3.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	GOA pipeline	RGD automated data pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
8.	Comprehensive gene review and curation	RGD comprehensive gene curation
9.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
10.	Localized effects of cAMP mediated by distinct routes of protein kinase A.	Tasken K and Aandahl EM, Physiol Rev. 2004 Jan;84(1):137-67.

Additional References at PubMed

PMID:10319321	PMID:11278869	PMID:15257753	PMID:16687649	PMID:21630459	PMID:27869233	PMID:30745215

Genomics

Comparative Map Data

Akap3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	161,374,198 - 161,400,062 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	161,374,407 - 161,400,230 (+)	Ensembl				GRCr8
mRatBN7.2	4	159,688,049 - 159,714,067 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	159,699,289 - 159,713,903 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	165,921,691 - 165,943,705 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	161,704,598 - 161,726,610 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	160,338,631 - 160,360,645 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	159,399,686 - 159,425,512 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	159,403,501 - 159,425,629 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	232,187,481 - 232,213,270 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	163,241,422 - 163,263,433 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	148,408,052 - 148,430,063 (+)	NCBI		Celera
RGSC_v3.1	4	163,486,357 - 163,508,368 (+)	NCBI
Cytogenetic Map	4	q42	NCBI

AKAP3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	4,615,518 - 4,649,051 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	4,613,383 - 4,649,072 (-)	Ensembl			hg38	GRCh38
GRCh37	12	4,724,684 - 4,758,217 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	4,594,937 - 4,624,604 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	12	4,594,937 - 4,624,604	NCBI
Celera	12	6,346,705 - 6,376,375 (-)	NCBI		Celera
Cytogenetic Map	12	p13.32	NCBI
HuRef	12	4,581,367 - 4,614,936 (-)	NCBI		HuRef
CHM1_1	12	4,724,286 - 4,757,854 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	4,622,335 - 4,655,891 (-)	NCBI		T2T-CHM13v2.0

Akap3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	126,830,061 - 126,851,271 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	126,830,061 - 126,851,271 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	6	126,853,098 - 126,874,308 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	126,853,098 - 126,874,308 (+)	Ensembl			mm10	GRCm38
MGSCv37	6	126,803,116 - 126,824,326 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	6	126,818,792 - 126,839,927 (+)	NCBI		MGSCv36	mm8
Celera	6	128,530,738 - 128,551,961 (+)	NCBI		Celera
Cytogenetic Map	6	F3	NCBI
cM Map	6	61.92	NCBI

Akap3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	2,411,553 - 2,433,388 (-)	Ensembl
ChiLan1.0	NW_004955413	2,411,618 - 2,432,658 (-)	NCBI	ChiLan1.0	ChiLan1.0

AKAP3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	10,164,081 - 10,197,632 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	10,160,846 - 10,194,390 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	4,733,095 - 4,766,596 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	4,655,004 - 4,687,239 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	4,655,004 - 4,677,651 (-)	Ensembl			panPan2	panpan1.1

AKAP3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	40,217,313 - 40,255,934 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	40,218,035 - 40,250,954 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	6,426,472 - 6,464,871 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	40,572,575 - 40,610,992 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	40,573,311 - 40,606,005 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	40,461,445 - 40,500,078 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	40,486,631 - 40,525,033 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	5,837,047 - 5,875,453 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Akap3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	104,389,579 - 104,412,804 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936606	4,771,180 - 4,794,902 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936606	4,771,158 - 4,794,666 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AKAP3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	65,797,376 - 65,819,765 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	5	65,788,744 - 65,816,031 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	67,995,078 - 68,020,685 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AKAP3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	4,635,962 - 4,675,993 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	4,634,442 - 4,673,571 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666063	3,565,363 - 3,605,962 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Akap3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624860	1,684,433 - 1,701,736 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624860	1,684,474 - 1,701,307 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Akap3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	6	21,023,966 - 21,049,437 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Akap3
71 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	59
Count of miRNA genes:	48
Interacting mature miRNAs:	57
Transcripts:	ENSRNOT00000026775
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
6478754	Anxrr43	Anxiety related response QTL 43		0.14035	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	146370897	184426481	Rat
724558	Plsm2	Polydactyly-luxate syndrome (PLS) morphotypes QTL 2		0.0003	hindlimb integrity trait (VT:0010563)	hind foot phalanges count (CMO:0001949)	4	134095016	179095016	Rat
1582237	Kidm34	Kidney mass QTL 34	4	0.0001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	4	149763204	169799698	Rat
6478757	Anxrr44	Anxiety related response QTL 44		0.01087	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
6478693	Anxrr32	Anxiety related response QTL 32		0.00092	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	4	146370897	184426481	Rat
1358364	Sradr4	Stress Responsive Adrenal Weight QTL 4	4.92		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	4	131384565	176384565	Rat
10755501	Bp390	Blood pressure QTL 390	2.5		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	4	27730518	170099664	Rat
61451	Ciaa4	CIA Autoantibody QTL 4	3.1		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	4	123870974	168870974	Rat
1331738	Bp209	Blood pressure QTL 209	2.979		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	140059299	181024663	Rat
1331802	Srn5	Serum renin concentration QTL 5	3.045		renin activity (VT:0005581)	plasma renin activity level (CMO:0000116)	4	117559384	162559384	Rat
6478700	Anxrr33	Anxiety related response QTL 33		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	146370897	184426481	Rat
1298524	Oia8	Oil induced arthritis QTL 8			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	140059299	184426481	Rat
10053718	Scort25	Serum corticosterone level QTL 25	2.15	0.0097	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	157292416	184426481	Rat
738009	Sach4	Saccharine consumption QTL 4	4.9	0.000016	consumption behavior trait (VT:0002069)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	60916264	184426481	Rat
737821	Hcar9	Hepatocarcinoma resistance QTL 9	3.7		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	4	106848959	168870974	Rat
634335	Anxrr16	Anxiety related response QTL 16	7.22		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	4	94638356	168870820	Rat
7411558	Bw133	Body weight QTL 133	13.84	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	127263297	172263297	Rat
6478778	Anxrr51	Anxiety related response QTL 51		0.25384	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	4	126334185	171334185	Rat
10401796	Kidm48	Kidney mass QTL 48			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	4	147299608	184426481	Rat
6478718	Anxrr34	Anxiety related response QTL 34		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	146370897	184426481	Rat
6478782	Anxrr52	Anxiety related response QTL 52		0.02091	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
631511	Pia7	Pristane induced arthritis QTL 7	4.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	123870974	168870974	Rat
634347	Hcar8	Hepatocarcinoma resistance QTL 8	5.8		liver integrity trait (VT:0010547)	liver tumorous lesion area to total liver area ratio (CMO:0001075)	4	124700988	169700988	Rat
6478720	Alc23	Alcohol consumption QTL 23		0.00509	drinking behavior trait (VT:0001422)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	155834926	184426481	Rat
6478785	Anxrr53	Anxiety related response QTL 53		0.01397	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
738031	Alc14	Alcohol consumption QTL 14	7.6	0.00003	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	174095838	Rat
1576316	Ept5	Estrogen-induced pituitary tumorigenesis QTL 5	3.8		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	4	100752691	179366077	Rat
1581566	Eae21	Experimental allergic encephalomyelitis QTL 21	6.2		body mass (VT:0001259)	maximum body weight loss to initial body weight ratio (CMO:0001400)	4	137447185	182447185	Rat
1578674	Bmd12	Bone mineral density QTL 12	3.8		femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	4	137430611	182430611	Rat
6478728	Anxrr36	Anxiety related response QTL 36		0.01061	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
738016	Alc16	Alcohol consumption QTL 16	3.6	0.00015	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	184426481	Rat
1358202	Gluco11	Glucose level QTL 11	2.4	0.02	adipocyte glucose uptake trait (VT:0004185)	absolute change in adipocyte glucose uptake (CMO:0000873)	4	86709649	168870974	Rat
61422	Cia13	Collagen induced arthritis QTL 13	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	134199006	168870974	Rat
634342	Cia24	Collagen induced arthritis QTL 24	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	148121375	176967367	Rat
6478733	Anxrr37	Anxiety related response QTL 37		0.00095	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
737978	Pia23	Pristane induced arthritis QTL 23	5.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	123870974	168870974	Rat
61362	Oia2	Oil induced arthritis QTL 2		0.001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	140059299	184426481	Rat
6478737	Anxrr38	Anxiety related response QTL 38		0.00159	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	155834926	184426481	Rat
2293659	Bmd35	Bone mineral density QTL 35	4.5	0.0001	femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	4	160623982	184426481	Rat
2316958	Gluco58	Glucose level QTL 58	10		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	12212457	182430611	Rat
6478748	Anxrr42	Anxiety related response QTL 42		0.28008	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	146370897	184426481	Rat
12798525	Anxrr57	Anxiety related response QTL 57	3.21	0.05	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	148834094	168870974	Rat

Markers in Region

AI577267

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	159,713,625 - 159,713,826 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	159,425,234 - 159,425,434	NCBI	Rnor6.0
Rnor_5.0	4	232,187,559 - 232,187,759	UniSTS	Rnor5.0
RGSC_v3.4	4	163,263,155 - 163,263,355	UniSTS	RGSC3.4
Celera	4	148,429,785 - 148,429,985	UniSTS
RH 3.4 Map	4	1008.6	UniSTS
Cytogenetic Map	4	q42	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
12	10	58	145	84	83	52	45	52	4	271	132	8	126	68	90	31	15	15

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001005557	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237488	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237491	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006237492	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763288	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763289	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763290	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592653	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592654	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107683	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286142	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286143	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286144	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286145	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063286147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC081924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473964	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000079225 ⟹ ENSRNOP00000071639

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	4	159,410,799 - 159,425,629 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000086525 ⟹ ENSRNOP00000072217

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	161,374,407 - 161,400,230 (+)	Ensembl
mRatBN7.2 Ensembl	4	159,699,289 - 159,713,903 (+)	Ensembl
Rnor_6.0 Ensembl	4	159,403,501 - 159,425,511 (+)	Ensembl

RefSeq Acc Id:

NM_001005557 ⟹ NP_001005557

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	161,378,050 - 161,400,062 (+)	NCBI
mRatBN7.2	4	159,691,892 - 159,713,904 (+)	NCBI
Rnor_6.0	4	159,403,501 - 159,425,512 (+)	NCBI
Rnor_5.0	4	232,187,481 - 232,213,270 (-)	NCBI
RGSC_v3.4	4	163,241,422 - 163,263,433 (+)	RGD
Celera	4	148,408,052 - 148,430,063 (+)	RGD

Sequence:

show sequence

CTTCAGCTGAGTAAGAACATCCCAGCATCTTCATTGACTTTAAAAGTATATTCTGGAGTCTCCT
GTGGTTCACTATTCTAGAGCTTCGGAGATGGCGGATAGGGTTGACTGGTTACAAAGTCAAAGTG
GCGTTTGCAAAGTTGGTGTCTATTCACCTGGAGACAACCAACACCAAGACTGGAAAATGGATTC
ATCAACAGATCCTGTCCGAGTGCTCAGCTGGCTCCGCAAAGACCTGGAGAAAAGTACAGCAGGG
TTCCAGGACTCGAGGTTCAAGCCTGGAGAATCATCATTTGGGGAGGAAGTGGCTTACCCAGGAG
ACCAACGAAAAGGTTTCTGCGTTGATTATTACAATACCACCAACAAGGGCAATCCAGGGAGATT
GCATTTTGAGATGTCTCACAAGGAGACCCCTCCCCAGGGCCTCATTGCCCATGTTGGTAATGGG
GGTTCCATAGACGAAGTTTCCTTCTACGCCAACCGCCTCACAAACCTAGTGATCGCCATGGCCC
GAAAAGAGATCAATGAGAAGATTCATGGTACTGAAAACAAATGTGTCCACCAGTCATTGTATAT
GGGGGATGATCCCACACCCCACAAAAGCTTGAGTACAGTAGCTTCTGAGCTCGTGAATGAGACA
GTCAGTGCATGTTCCAAGAATATTACCGGTGACAAAGCTCCCGGCTCTGGAGACAGGGCCTTGG
CGTCTTCACAGAGCCCTGGTCTAAGATTCACAAGCACTCTGAAGATCAAGGAGAGCACGAAGGA
AGGCAAGTGTCCTGACAACAAGCCTGGTTCTAAGAAGTCCTTCTTCTACAAGGAAGTGTTTGAG
TCTCGGAATGCAGGAGATGCCAAGGAGGGTGGGAGGTCCTTACCTGGAGATAGAAAACTGTTCA
GGTGCCCGGACAGGCCTGACGACTTTTCCAACTCTATCAGTCAAGGGATCATGACCTATGCCAA
CAGTGTGGTGTCTGACATGATGGTGTCCATCATGAAGACACTGAAGATCCAGGTAAAAGACACA
ACCATCGCCACTATTCTGCTGAAGAAGGTGTTGATGAAGCATGCAAAAGAGGTTGTCTCCGATC
TCATCGACTCCTTCATGAAGAACCTCCACAGTGTCACAGGGAGTCTCATGACTGACACAGACTT
CGTCTCAGCTGTGAAGCGAAGTTTTTTTTCTCATGGAAGCCAAAAGGCTACAGATATCATGGAT
GCCATGCTGGGCAAGCTATACAATGTGATGTGTGCCAAGAAATATCCTGAGAACATCAGGAAAG
CCAGGGACAAGTCCGAGAGTTACTCCCTTATCTCCATGAAATCACGACCTGGTGACCCAAAGCT
CTCAAACTTGAACTTTGCGATGAAATCAGAATCAAAACTGAAAGAAAATTTGTTTTCTGCATGC
ATATCAGAGAAAGAGAAGACATGCGCTGAAACTCTGGGTGAGCACATCATTAAGGAGGGACTGA
ACATGTGGCACAAGAGTCAGCAAAATTCTCCTGGCTTGGAGCGTGCCACAAAACAGGGCGCCGT
TCCACAGGAGGTCTCCTTTGAGTGTCCGGATCCTTGTGAGGTAAACCCTCTTCAGCAACCTCAG
CCACCAGAGAACTTTGAAAATTTTATGTGTGAATCAGACTCCTGGGCCAAGGACCTGATTGTAT
CTGCCCTGCTTCTGATTCAGTACCACCTGGCACAGGGAGGAAGGATGGATGCTCAGAGCTTCCT
GGAAGCCGCCGCCAGCACCAATTTTCCCACCAAGTCCTCTCCTGTAGTTCATGATGAGGGCAAA
GTTAAGTCTCCTCCCCTTAAGATATGTGAGCAGGAACAAACAGAAAAGAAAGATCTGATGAGTG
TCATCTTCAATTTTATCCGGAACTTACTCAGTGAGACCATATTCAAGGGTAGCCGTAATTGTGA
GTCCAAGGCTCACGAGCAGATCATTAAGGAAGAAGAGATCAACCTATGTGAAAGGCCTCTGTCT
CCATGTGAAAGGCCTATGTCCCCACCTGTCCCGAAATTCTGTGAGGATGAGGAGGCCACTGGTG
GTGCCTTATCTGGGCTAACCAAGATGGTCGCCAACCAGCTAGATGGCTGTATGAATGGGCAGAT
GGTGGAGCATCTGATGGACTCGGTGATGAAGTTATGCCTCATTATCGCCAAGTCCTGTGACTCG
CCCTTGTCAGAGCTGGGAGACGAAAAGTGTGGGGATGCCAGCCGGCCGAGTTCTGCCTTCCCAG
ATAACTTATATGAGTGCTTACCAGTCAAGGGCACGGGGACAGCCGAAGCCCTCCTGCAGAACGC
CTATCTAGCCATCCACAACGAACTGAGAGGTTTGTCAGGACAGCCACCCGAGGGCTGTGAAATC
CCCAAGGTGATCGTCAGCAACCACAATCTGGCTGACACTGTCCAGAACAAGCAGCTGCAAGCTG
TCCTTCAGTGGGTGGCTGCCTCAGAGCTCAATGTCCCTATTTTGTACTTCGCTGGTGACGATGA
AGGAATCCAGGAGAAGCTGCTTCAGCTCTCAGCCACTGCTGTGGAGAAAGGCCGAAGCGTCGGG
GAGGTTCTGCAGTCGGTGCTTAGGTATGAGAAGGAGCGACAGCTGGATGAGGCAGTGGGAAATG
TCACGCGGCTGCAGCTGCTGGACTGGCTGATGGCAAACCTGTGATTGGGGCCCACCCGGTGTTC
CTGCAGTGGGCCGAGTCCCTGCCCTCTCAGCCCCTCCCTGCCGCACAGAGCCCTAAAGTTCCCT
CCATACCACCCACACTAGACACGCCATCTAATGCTACTCACTGGATTTTGCAGATTTTCTTGTC
CATGCGAGCAAGGACATAAATTAAAAGATTACAGTTAAAGGGCAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006237488 ⟹ XP_006237550

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	161,375,833 - 161,400,062 (+)	NCBI
mRatBN7.2	4	159,691,827 - 159,714,067 (+)	NCBI
Rnor_6.0	4	159,403,418 - 159,425,512 (+)	NCBI
Rnor_5.0	4	232,187,481 - 232,213,270 (-)	NCBI

Sequence:

show sequence

GACATCACTAGCTGCAATTCTGATGTCACTCCCTAGTCCCAACAAGGAGGAGGTGCATGGAAGG
CTGGGGGAGGAAACAAGATCTTCAGCTGAGTAAGAACATCCCAGCATCTTCATTGACTTTAAAA
GTATATTCTGGAGTCTCCTGTGGTTCACTATTCTAGAGCTTCGGAGGTTCTCCAATTTTAAGAA
AGATGAGCTGCCTGGAATTACAAATGGGCAGGACTTTTATATTCACTCTTTCAACAGAAAATTA
CTAAGCACCAACTCTAAAGATGGCGGATAGGGTTGACTGGTTACAAAGTCAAAGTGGCGTTTGC
AAAGTTGGTGTCTATTCACCTGGAGACAACCAACACCAAGACTGGAAAATGGATTCATCAACAG
ATCCTGTCCGAGTGCTCAGCTGGCTCCGCAAAGACCTGGAGAAAAGTACAGCAGGGTTCCAGGA
CTCGAGGTTCAAGCCTGGAGAATCATCATTTGGGGAGGAAGTGGCTTACCCAGGAGACCAACGA
AAAGGTTTCTGCGTTGATTATTACAATACCACCAACAAGGGCAATCCAGGGAGATTGCATTTTG
AGATGTCTCACAAGGAGACCCCTCCCCAGGGCCTCATTGCCCATGTTGGTAATGGGGGTTCCAT
AGACGAAGTTTCCTTCTACGCCAACCGCCTCACAAACCTAGTGATCGCCATGGCCCGAAAAGAG
ATCAATGAGAAGATTCATGGTACTGAAAACAAATGTGTCCACCAGTCATTGTATATGGGGGATG
ATCCCACACCCCACAAAAGCTTGAGTACAGTAGCTTCTGAGCTCGTGAATGAGACAGTCAGTGC
ATGTTCCAAGAATATTACCGGTGACAAAGCTCCCGGCTCTGGAGACAGGGCCTTGGCGTCTTCA
CAGAGCCCTGGTCTAAGATTCACAAGCACTCTGAAGATCAAGGAGAGCACGAAGGAAGGCAAGT
GTCCTGACAACAAGCCTGGTTCTAAGAAGTCCTTCTTCTACAAGGAAGTGTTTGAGTCTCGGAA
TGCAGGAGATGCCAAGGAGGGTGGGAGGTCCTTACCTGGAGATAGAAAACTGTTCAGGTGCCCG
GACAGGCCTGACGACTTTTCCAACTCTATCAGTCAAGGGATCATGACCTATGCCAACAGTGTGG
TGTCTGACATGATGGTGTCCATCATGAAGACACTGAAGATCCAGGTAAAAGACACAACCATCGC
CACTATTCTGCTGAAGAAGGTGTTGATGAAGCATGCAAAAGAGGTTGTCTCCGATCTCATCGAC
TCCTTCATGAAGAACCTCCACAGTGTCACAGGGAGTCTCATGACTGACACAGACTTCGTCTCAG
CTGTGAAGCGAAGTTTTTTTTCTCATGGAAGCCAAAAGGCTACAGATATCATGGATGCCATGCT
GGGCAAGCTATACAATGTGATGTGTGCCAAGAAATATCCTGAGAACATCAGGAAAGCCAGGGAC
AAGTCCGAGAGTTACTCCCTTATCTCCATGAAATCACGACCTGGTGACCCAAAGCTCTCAAACT
TGAACTTTGCGATGAAATCAGAATCAAAACTGAAAGAAAATTTGTTTTCTGCATGCATATCAGA
GAAAGAGAAGACATGCGCTGAAACTCTGGGTGAGCACATCATTAAGGAGGGACTGAACATGTGG
CACAAGAGTCAGCAAAATTCTCCTGGCTTGGAGCGTGCCACAAAACAGGGCGCCGTTCCACAGG
AGGTCTCCTTTGAGTGTCCGGATCCTTGTGAGGTAAACCCTCTTCAGCAACCTCAGCCACCAGA
GAACTTTGAAAATTTTATGTGTGAATCAGACTCCTGGGCCAAGGACCTGATTGTATCTGCCCTG
CTTCTGATTCAGTACCACCTGGCACAGGGAGGAAGGATGGATGCTCAGAGCTTCCTGGAAGCCG
CCGCCAGCACCAATTTTCCCACCAAGTCCTCTCCTGTAGTTCATGATGAGGGCAAAGTTAAGTC
TCCTCCCCTTAAGATATGTGAGCAGGAACAAACAGAAAAGAAAGATCTGATGAGTGTCATCTTC
AATTTTATCCGGAACTTACTCAGTGAGACCATATTCAAGGGTAGCCGTAATTGTGAGTCCAAGG
CTCACGAGCAGATCATTAAGGAAGAAGAGATCAACCTATGTGAAAGGCCTCTGTCTCCATGTGA
AAGGCCTATGTCCCCACCTGTCCCGAAATTCTGTGAGGATGAGGAGGCCACTGGTGGTGCCTTA
TCTGGGCTAACCAAGATGGTCGCCAACCAGCTAGATGGCTGTATGAATGGGCAGATGGTGGAGC
ATCTGATGGACTCGGTGATGAAGTTATGCCTCATTATCGCCAAGTCCTGTGACTCGCCCTTGTC
AGAGCTGGGAGACGAAAAGTGTGGGGATGCCAGCCGGCCGAGTTCTGCCTTCCCAGATAACTTA
TATGAGTGCTTACCAGTCAAGGGCACGGGGACAGCCGAAGCCCTCCTGCAGAACGCCTATCTAG
CCATCCACAACGAACTGAGAGGTTTGTCAGGACAGCCACCCGAGGGCTGTGAAATCCCCAAGGT
GATCGTCAGCAACCACAATCTGGCTGACACTGTCCAGAACAAGCAGCTGCAAGCTGTCCTTCAG
TGGGTGGCTGCCTCAGAGCTCAATGTCCCTATTTTGTACTTCGCTGGTGACGATGAAGGAATCC
AGGAGAAGCTGCTTCAGCTCTCAGCCACTGCTGTGGAGAAAGGCCGAAGCGTCGGGGAGGTTCT
GCAGTCGGTGCTTAGGTATGAGAAGGAGCGACAGCTGGATGAGGCAGTGGGAAATGTCACGCGG
CTGCAGCTGCTGGACTGGCTGATGGCAAACCTGTGATTGGGGCCCACCCGGTGTTCCTGCAGTG
GGCCGAGTCCCTGCCCTCTCAGCCCCTCCCTGCCGCACAGAGCCCTAAAGTTCCCTCCATACCA
CCCACACTAGACACGCCATCTAATGCTACTCACTGGATTTTGCAGATTTTCTTGTCCATGCGAG
CAAGGACATAAATTAAAAGATTACAGTTAAAGGGCA

hide sequence

RefSeq Acc Id:

XM_006237489 ⟹ XP_006237551

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	161,375,833 - 161,400,062 (+)	NCBI
mRatBN7.2	4	159,691,827 - 159,714,067 (+)	NCBI
Rnor_6.0	4	159,403,417 - 159,425,512 (+)	NCBI
Rnor_5.0	4	232,187,481 - 232,213,270 (-)	NCBI

Sequence:

show sequence

TGACATCACTAGCTGCAATTCTGATGTCACTCCCTAGTCCCAACAAGGAGGAGGTGCATGGAAG
GCTGGGGGAGGAAACAAGATCTTCAGCTGAGTAAGAACATCCCAGCATCTTCATTGACTTTAAA
AGTATATTCTGGAGTCTCCTGTGGTTCACTATTCTAGAGCTTCGGAGGTTCTCCAATTTTAAGA
AAGATGAGCTGCCTGGAATTACAAATGGGCAGGACTTTTATATTCACTCTTTCAACAGAAAATT
ACTAAGCACCAACTCTAAAGAGTCCTTATATATTACATGGCAGGAGGGGTGGGTAGACTTAGGG
ATAGTGAAGACACCAATAAGGCTCACTCGGAGTTTTCCTTGTATCTCAAAACCCATCCTCAATA
AGGATGGCGGATAGGGTTGACTGGTTACAAAGTCAAAGTGGCGTTTGCAAAGTTGGTGTCTATT
CACCTGGAGACAACCAACACCAAGACTGGAAAATGGATTCATCAACAGATCCTGTCCGAGTGCT
CAGCTGGCTCCGCAAAGACCTGGAGAAAAGTACAGCAGGGTTCCAGGACTCGAGGTTCAAGCCT
GGAGAATCATCATTTGGGGAGGAAGTGGCTTACCCAGGAGACCAACGAAAAGGTTTCTGCGTTG
ATTATTACAATACCACCAACAAGGGCAATCCAGGGAGATTGCATTTTGAGATGTCTCACAAGGA
GACCCCTCCCCAGGGCCTCATTGCCCATGTTGGTAATGGGGGTTCCATAGACGAAGTTTCCTTC
TACGCCAACCGCCTCACAAACCTAGTGATCGCCATGGCCCGAAAAGAGATCAATGAGAAGATTC
ATGGTACTGAAAACAAATGTGTCCACCAGTCATTGTATATGGGGGATGATCCCACACCCCACAA
AAGCTTGAGTACAGTAGCTTCTGAGCTCGTGAATGAGACAGTCAGTGCATGTTCCAAGAATATT
ACCGGTGACAAAGCTCCCGGCTCTGGAGACAGGGCCTTGGCGTCTTCACAGAGCCCTGGTCTAA
GATTCACAAGCACTCTGAAGATCAAGGAGAGCACGAAGGAAGGCAAGTGTCCTGACAACAAGCC
TGGTTCTAAGAAGTCCTTCTTCTACAAGGAAGTGTTTGAGTCTCGGAATGCAGGAGATGCCAAG
GAGGGTGGGAGGTCCTTACCTGGAGATAGAAAACTGTTCAGGTGCCCGGACAGGCCTGACGACT
TTTCCAACTCTATCAGTCAAGGGATCATGACCTATGCCAACAGTGTGGTGTCTGACATGATGGT
GTCCATCATGAAGACACTGAAGATCCAGGTAAAAGACACAACCATCGCCACTATTCTGCTGAAG
AAGGTGTTGATGAAGCATGCAAAAGAGGTTGTCTCCGATCTCATCGACTCCTTCATGAAGAACC
TCCACAGTGTCACAGGGAGTCTCATGACTGACACAGACTTCGTCTCAGCTGTGAAGCGAAGTTT
TTTTTCTCATGGAAGCCAAAAGGCTACAGATATCATGGATGCCATGCTGGGCAAGCTATACAAT
GTGATGTGTGCCAAGAAATATCCTGAGAACATCAGGAAAGCCAGGGACAAGTCCGAGAGTTACT
CCCTTATCTCCATGAAATCACGACCTGGTGACCCAAAGCTCTCAAACTTGAACTTTGCGATGAA
ATCAGAATCAAAACTGAAAGAAAATTTGTTTTCTGCATGCATATCAGAGAAAGAGAAGACATGC
GCTGAAACTCTGGGTGAGCACATCATTAAGGAGGGACTGAACATGTGGCACAAGAGTCAGCAAA
ATTCTCCTGGCTTGGAGCGTGCCACAAAACAGGGCGCCGTTCCACAGGAGGTCTCCTTTGAGTG
TCCGGATCCTTGTGAGGTAAACCCTCTTCAGCAACCTCAGCCACCAGAGAACTTTGAAAATTTT
ATGTGTGAATCAGACTCCTGGGCCAAGGACCTGATTGTATCTGCCCTGCTTCTGATTCAGTACC
ACCTGGCACAGGGAGGAAGGATGGATGCTCAGAGCTTCCTGGAAGCCGCCGCCAGCACCAATTT
TCCCACCAAGTCCTCTCCTGTAGTTCATGATGAGGGCAAAGTTAAGTCTCCTCCCCTTAAGATA
TGTGAGCAGGAACAAACAGAAAAGAAAGATCTGATGAGTGTCATCTTCAATTTTATCCGGAACT
TACTCAGTGAGACCATATTCAAGGGTAGCCGTAATTGTGAGTCCAAGGCTCACGAGCAGATCAT
TAAGGAAGAAGAGATCAACCTATGTGAAAGGCCTCTGTCTCCATGTGAAAGGCCTATGTCCCCA
CCTGTCCCGAAATTCTGTGAGGATGAGGAGGCCACTGGTGGTGCCTTATCTGGGCTAACCAAGA
TGGTCGCCAACCAGCTAGATGGCTGTATGAATGGGCAGATGGTGGAGCATCTGATGGACTCGGT
GATGAAGTTATGCCTCATTATCGCCAAGTCCTGTGACTCGCCCTTGTCAGAGCTGGGAGACGAA
AAGTGTGGGGATGCCAGCCGGCCGAGTTCTGCCTTCCCAGATAACTTATATGAGTGCTTACCAG
TCAAGGGCACGGGGACAGCCGAAGCCCTCCTGCAGAACGCCTATCTAGCCATCCACAACGAACT
GAGAGGTTTGTCAGGACAGCCACCCGAGGGCTGTGAAATCCCCAAGGTGATCGTCAGCAACCAC
AATCTGGCTGACACTGTCCAGAACAAGCAGCTGCAAGCTGTCCTTCAGTGGGTGGCTGCCTCAG
AGCTCAATGTCCCTATTTTGTACTTCGCTGGTGACGATGAAGGAATCCAGGAGAAGCTGCTTCA
GCTCTCAGCCACTGCTGTGGAGAAAGGCCGAAGCGTCGGGGAGGTTCTGCAGTCGGTGCTTAGG
TATGAGAAGGAGCGACAGCTGGATGAGGCAGTGGGAAATGTCACGCGGCTGCAGCTGCTGGACT
GGCTGATGGCAAACCTGTGATTGGGGCCCACCCGGTGTTCCTGCAGTGGGCCGAGTCCCTGCCC
TCTCAGCCCCTCCCTGCCGCACAGAGCCCTAAAGTTCCCTCCATACCACCCACACTAGACACGC
CATCTAATGCTACTCACTGGATTTTGCAGATTTTCTTGTCCATGCGAGCAAGGACATAAATTAA
AAGATTACAGTTAAAGGGCA

hide sequence

RefSeq Acc Id:

XM_006237492 ⟹ XP_006237554

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	161,374,198 - 161,400,062 (+)	NCBI
mRatBN7.2	4	159,688,049 - 159,714,067 (+)	NCBI
Rnor_6.0	4	159,399,715 - 159,425,512 (+)	NCBI
Rnor_5.0	4	232,187,481 - 232,213,270 (-)	NCBI

Sequence:

show sequence

GGCGGGGCCCAGGTTGATCAGAGAGACTGGGAGTGAAAGCAGAGGTTCTCCAATTTTAAGAAAG
ATGAGCTGCCTGGAATTACAAATGGGCAGGACTTTTATATTCACTCTTTCAACAGAAAATTACT
AAGCACCAACTCTAAAGATGGCGGATAGGGTTGACTGGTTACAAAGTCAAAGTGGCGTTTGCAA
AGTTGGTGTCTATTCACCTGGAGACAACCAACACCAAGACTGGAAAATGGATTCATCAACAGAT
CCTGTCCGAGTGCTCAGCTGGCTCCGCAAAGACCTGGAGAAAAGTACAGCAGGGTTCCAGGACT
CGAGGTTCAAGCCTGGAGAATCATCATTTGGGGAGGAAGTGGCTTACCCAGGAGACCAACGAAA
AGGTTTCTGCGTTGATTATTACAATACCACCAACAAGGGCAATCCAGGGAGATTGCATTTTGAG
ATGTCTCACAAGGAGACCCCTCCCCAGGGCCTCATTGCCCATGTTGGTAATGGGGGTTCCATAG
ACGAAGTTTCCTTCTACGCCAACCGCCTCACAAACCTAGTGATCGCCATGGCCCGAAAAGAGAT
CAATGAGAAGATTCATGGTACTGAAAACAAATGTGTCCACCAGTCATTGTATATGGGGGATGAT
CCCACACCCCACAAAAGCTTGAGTACAGTAGCTTCTGAGCTCGTGAATGAGACAGTCAGTGCAT
GTTCCAAGAATATTACCGGTGACAAAGCTCCCGGCTCTGGAGACAGGGCCTTGGCGTCTTCACA
GAGCCCTGGTCTAAGATTCACAAGCACTCTGAAGATCAAGGAGAGCACGAAGGAAGGCAAGTGT
CCTGACAACAAGCCTGGTTCTAAGAAGTCCTTCTTCTACAAGGAAGTGTTTGAGTCTCGGAATG
CAGGAGATGCCAAGGAGGGTGGGAGGTCCTTACCTGGAGATAGAAAACTGTTCAGGTGCCCGGA
CAGGCCTGACGACTTTTCCAACTCTATCAGTCAAGGGATCATGACCTATGCCAACAGTGTGGTG
TCTGACATGATGGTGTCCATCATGAAGACACTGAAGATCCAGGTAAAAGACACAACCATCGCCA
CTATTCTGCTGAAGAAGGTGTTGATGAAGCATGCAAAAGAGGTTGTCTCCGATCTCATCGACTC
CTTCATGAAGAACCTCCACAGTGTCACAGGGAGTCTCATGACTGACACAGACTTCGTCTCAGCT
GTGAAGCGAAGTTTTTTTTCTCATGGAAGCCAAAAGGCTACAGATATCATGGATGCCATGCTGG
GCAAGCTATACAATGTGATGTGTGCCAAGAAATATCCTGAGAACATCAGGAAAGCCAGGGACAA
GTCCGAGAGTTACTCCCTTATCTCCATGAAATCACGACCTGGTGACCCAAAGCTCTCAAACTTG
AACTTTGCGATGAAATCAGAATCAAAACTGAAAGAAAATTTGTTTTCTGCATGCATATCAGAGA
AAGAGAAGACATGCGCTGAAACTCTGGGTGAGCACATCATTAAGGAGGGACTGAACATGTGGCA
CAAGAGTCAGCAAAATTCTCCTGGCTTGGAGCGTGCCACAAAACAGGGCGCCGTTCCACAGGAG
GTCTCCTTTGAGTGTCCGGATCCTTGTGAGGTAAACCCTCTTCAGCAACCTCAGCCACCAGAGA
ACTTTGAAAATTTTATGTGTGAATCAGACTCCTGGGCCAAGGACCTGATTGTATCTGCCCTGCT
TCTGATTCAGTACCACCTGGCACAGGGAGGAAGGATGGATGCTCAGAGCTTCCTGGAAGCCGCC
GCCAGCACCAATTTTCCCACCAAGTCCTCTCCTGTAGTTCATGATGAGGGCAAAGTTAAGTCTC
CTCCCCTTAAGATATGTGAGCAGGAACAAACAGAAAAGAAAGATCTGATGAGTGTCATCTTCAA
TTTTATCCGGAACTTACTCAGTGAGACCATATTCAAGGGTAGCCGTAATTGTGAGTCCAAGGCT
CACGAGCAGATCATTAAGGAAGAAGAGATCAACCTATGTGAAAGGCCTCTGTCTCCATGTGAAA
GGCCTATGTCCCCACCTGTCCCGAAATTCTGTGAGGATGAGGAGGCCACTGGTGGTGCCTTATC
TGGGCTAACCAAGATGGTCGCCAACCAGCTAGATGGCTGTATGAATGGGCAGATGGTGGAGCAT
CTGATGGACTCGGTGATGAAGTTATGCCTCATTATCGCCAAGTCCTGTGACTCGCCCTTGTCAG
AGCTGGGAGACGAAAAGTGTGGGGATGCCAGCCGGCCGAGTTCTGCCTTCCCAGATAACTTATA
TGAGTGCTTACCAGTCAAGGGCACGGGGACAGCCGAAGCCCTCCTGCAGAACGCCTATCTAGCC
ATCCACAACGAACTGAGAGGTTTGTCAGGACAGCCACCCGAGGGCTGTGAAATCCCCAAGGTGA
TCGTCAGCAACCACAATCTGGCTGACACTGTCCAGAACAAGCAGCTGCAAGCTGTCCTTCAGTG
GGTGGCTGCCTCAGAGCTCAATGTCCCTATTTTGTACTTCGCTGGTGACGATGAAGGAATCCAG
GAGAAGCTGCTTCAGCTCTCAGCCACTGCTGTGGAGAAAGGCCGAAGCGTCGGGGAGGTTCTGC
AGTCGGTGCTTAGGTATGAGAAGGAGCGACAGCTGGATGAGGCAGTGGGAAATGTCACGCGGCT
GCAGCTGCTGGACTGGCTGATGGCAAACCTGTGATTGGGGCCCACCCGGTGTTCCTGCAGTGGG
CCGAGTCCCTGCCCTCTCAGCCCCTCCCTGCCGCACAGAGCCCTAAAGTTCCCTCCATACCACC
CACACTAGACACGCCATCTAATGCTACTCACTGGATTTTGCAGATTTTCTTGTCCATGCGAGCA
AGGACATAAATTAAAAGATTACAGTTAAAGGGCA

hide sequence

RefSeq Acc Id:

XM_008763289 ⟹ XP_008761511

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	161,377,978 - 161,400,062 (+)	NCBI
mRatBN7.2	4	159,691,878 - 159,714,067 (+)	NCBI
Rnor_6.0	4	159,403,418 - 159,425,512 (+)	NCBI

Sequence:

show sequence

GACATCACTAGCTGCAATTCTGATGTCACTCCCTAGTCCCAACAAGGAGGAGGTGCATGGAAGG
CTGGGGGAGGAAACAAGATCTTCAGCTGAATGGCGGATAGGGTTGACTGGTTACAAAGTCAAAG
TGGCGTTTGCAAAGTTGGTGTCTATTCACCTGGAGACAACCAACACCAAGACTGGAAAATGGAT
TCATCAACAGATCCTGTCCGAGTGCTCAGCTGGCTCCGCAAAGACCTGGAGAAAAGTACAGCAG
GGTTCCAGGACTCGAGGTTCAAGCCTGGAGAATCATCATTTGGGGAGGAAGTGGCTTACCCAGG
AGACCAACGAAAAGGTTTCTGCGTTGATTATTACAATACCACCAACAAGGGCAATCCAGGGAGA
TTGCATTTTGAGATGTCTCACAAGGAGACCCCTCCCCAGGGCCTCATTGCCCATGTTGGTAATG
GGGGTTCCATAGACGAAGTTTCCTTCTACGCCAACCGCCTCACAAACCTAGTGATCGCCATGGC
CCGAAAAGAGATCAATGAGAAGATTCATGGTACTGAAAACAAATGTGTCCACCAGTCATTGTAT
ATGGGGGATGATCCCACACCCCACAAAAGCTTGAGTACAGTAGCTTCTGAGCTCGTGAATGAGA
CAGTCAGTGCATGTTCCAAGAATATTACCGGTGACAAAGCTCCCGGCTCTGGAGACAGGGCCTT
GGCGTCTTCACAGAGCCCTGGTCTAAGATTCACAAGCACTCTGAAGATCAAGGAGAGCACGAAG
GAAGGCAAGTGTCCTGACAACAAGCCTGGTTCTAAGAAGTCCTTCTTCTACAAGGAAGTGTTTG
AGTCTCGGAATGCAGGAGATGCCAAGGAGGGTGGGAGGTCCTTACCTGGAGATAGAAAACTGTT
CAGGTGCCCGGACAGGCCTGACGACTTTTCCAACTCTATCAGTCAAGGGATCATGACCTATGCC
AACAGTGTGGTGTCTGACATGATGGTGTCCATCATGAAGACACTGAAGATCCAGGTAAAAGACA
CAACCATCGCCACTATTCTGCTGAAGAAGGTGTTGATGAAGCATGCAAAAGAGGTTGTCTCCGA
TCTCATCGACTCCTTCATGAAGAACCTCCACAGTGTCACAGGGAGTCTCATGACTGACACAGAC
TTCGTCTCAGCTGTGAAGCGAAGTTTTTTTTCTCATGGAAGCCAAAAGGCTACAGATATCATGG
ATGCCATGCTGGGCAAGCTATACAATGTGATGTGTGCCAAGAAATATCCTGAGAACATCAGGAA
AGCCAGGGACAAGTCCGAGAGTTACTCCCTTATCTCCATGAAATCACGACCTGGTGACCCAAAG
CTCTCAAACTTGAACTTTGCGATGAAATCAGAATCAAAACTGAAAGAAAATTTGTTTTCTGCAT
GCATATCAGAGAAAGAGAAGACATGCGCTGAAACTCTGGGTGAGCACATCATTAAGGAGGGACT
GAACATGTGGCACAAGAGTCAGCAAAATTCTCCTGGCTTGGAGCGTGCCACAAAACAGGGCGCC
GTTCCACAGGAGGTCTCCTTTGAGTGTCCGGATCCTTGTGAGGTAAACCCTCTTCAGCAACCTC
AGCCACCAGAGAACTTTGAAAATTTTATGTGTGAATCAGACTCCTGGGCCAAGGACCTGATTGT
ATCTGCCCTGCTTCTGATTCAGTACCACCTGGCACAGGGAGGAAGGATGGATGCTCAGAGCTTC
CTGGAAGCCGCCGCCAGCACCAATTTTCCCACCAAGTCCTCTCCTGTAGTTCATGATGAGGGCA
AAGTTAAGTCTCCTCCCCTTAAGATATGTGAGCAGGAACAAACAGAAAAGAAAGATCTGATGAG
TGTCATCTTCAATTTTATCCGGAACTTACTCAGTGAGACCATATTCAAGGGTAGCCGTAATTGT
GAGTCCAAGGCTCACGAGCAGATCATTAAGGAAGAAGAGATCAACCTATGTGAAAGGCCTCTGT
CTCCATGTGAAAGGCCTATGTCCCCACCTGTCCCGAAATTCTGTGAGGATGAGGAGGCCACTGG
TGGTGCCTTATCTGGGCTAACCAAGATGGTCGCCAACCAGCTAGATGGCTGTATGAATGGGCAG
ATGGTGGAGCATCTGATGGACTCGGTGATGAAGTTATGCCTCATTATCGCCAAGTCCTGTGACT
CGCCCTTGTCAGAGCTGGGAGACGAAAAGTGTGGGGATGCCAGCCGGCCGAGTTCTGCCTTCCC
AGATAACTTATATGAGTGCTTACCAGTCAAGGGCACGGGGACAGCCGAAGCCCTCCTGCAGAAC
GCCTATCTAGCCATCCACAACGAACTGAGAGGTTTGTCAGGACAGCCACCCGAGGGCTGTGAAA
TCCCCAAGGTGATCGTCAGCAACCACAATCTGGCTGACACTGTCCAGAACAAGCAGCTGCAAGC
TGTCCTTCAGTGGGTGGCTGCCTCAGAGCTCAATGTCCCTATTTTGTACTTCGCTGGTGACGAT
GAAGGAATCCAGGAGAAGCTGCTTCAGCTCTCAGCCACTGCTGTGGAGAAAGGCCGAAGCGTCG
GGGAGGTTCTGCAGTCGGTGCTTAGGTATGAGAAGGAGCGACAGCTGGATGAGGCAGTGGGAAA
TGTCACGCGGCTGCAGCTGCTGGACTGGCTGATGGCAAACCTGTGATTGGGGCCCACCCGGTGT
TCCTGCAGTGGGCCGAGTCCCTGCCCTCTCAGCCCCTCCCTGCCGCACAGAGCCCTAAAGTTCC
CTCCATACCACCCACACTAGACACGCCATCTAATGCTACTCACTGGATTTTGCAGATTTTCTTG
TCCATGCGAGCAAGGACATAAATTAAAAGATTACAGTTAAAGGGCA

hide sequence

RefSeq Acc Id:

XM_008763290 ⟹ XP_008761512

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	161,374,222 - 161,400,062 (+)	NCBI
mRatBN7.2	4	159,688,127 - 159,714,067 (+)	NCBI
Rnor_6.0	4	159,399,686 - 159,425,512 (+)	NCBI

Sequence:

show sequence

CTGCGCAGACGCCAACTGAGAACGGAAGTGGCGGGGCCCAGGTTGATCAGAGAGACTGGGAGTG
AAAGCAGAGATGGCGGATAGGGTTGACTGGTTACAAAGTCAAAGTGGCGTTTGCAAAGTTGGTG
TCTATTCACCTGGAGACAACCAACACCAAGACTGGAAAATGGATTCATCAACAGATCCTGTCCG
AGTGCTCAGCTGGCTCCGCAAAGACCTGGAGAAAAGTACAGCAGGGTTCCAGGACTCGAGGTTC
AAGCCTGGAGAATCATCATTTGGGGAGGAAGTGGCTTACCCAGGAGACCAACGAAAAGGTTTCT
GCGTTGATTATTACAATACCACCAACAAGGGCAATCCAGGGAGATTGCATTTTGAGATGTCTCA
CAAGGAGACCCCTCCCCAGGGCCTCATTGCCCATGTTGGTAATGGGGGTTCCATAGACGAAGTT
TCCTTCTACGCCAACCGCCTCACAAACCTAGTGATCGCCATGGCCCGAAAAGAGATCAATGAGA
AGATTCATGGTACTGAAAACAAATGTGTCCACCAGTCATTGTATATGGGGGATGATCCCACACC
CCACAAAAGCTTGAGTACAGTAGCTTCTGAGCTCGTGAATGAGACAGTCAGTGCATGTTCCAAG
AATATTACCGGTGACAAAGCTCCCGGCTCTGGAGACAGGGCCTTGGCGTCTTCACAGAGCCCTG
GTCTAAGATTCACAAGCACTCTGAAGATCAAGGAGAGCACGAAGGAAGGCAAGTGTCCTGACAA
CAAGCCTGGTTCTAAGAAGTCCTTCTTCTACAAGGAAGTGTTTGAGTCTCGGAATGCAGGAGAT
GCCAAGGAGGGTGGGAGGTCCTTACCTGGAGATAGAAAACTGTTCAGGTGCCCGGACAGGCCTG
ACGACTTTTCCAACTCTATCAGTCAAGGGATCATGACCTATGCCAACAGTGTGGTGTCTGACAT
GATGGTGTCCATCATGAAGACACTGAAGATCCAGGTAAAAGACACAACCATCGCCACTATTCTG
CTGAAGAAGGTGTTGATGAAGCATGCAAAAGAGGTTGTCTCCGATCTCATCGACTCCTTCATGA
AGAACCTCCACAGTGTCACAGGGAGTCTCATGACTGACACAGACTTCGTCTCAGCTGTGAAGCG
AAGTTTTTTTTCTCATGGAAGCCAAAAGGCTACAGATATCATGGATGCCATGCTGGGCAAGCTA
TACAATGTGATGTGTGCCAAGAAATATCCTGAGAACATCAGGAAAGCCAGGGACAAGTCCGAGA
GTTACTCCCTTATCTCCATGAAATCACGACCTGGTGACCCAAAGCTCTCAAACTTGAACTTTGC
GATGAAATCAGAATCAAAACTGAAAGAAAATTTGTTTTCTGCATGCATATCAGAGAAAGAGAAG
ACATGCGCTGAAACTCTGGGTGAGCACATCATTAAGGAGGGACTGAACATGTGGCACAAGAGTC
AGCAAAATTCTCCTGGCTTGGAGCGTGCCACAAAACAGGGCGCCGTTCCACAGGAGGTCTCCTT
TGAGTGTCCGGATCCTTGTGAGGTAAACCCTCTTCAGCAACCTCAGCCACCAGAGAACTTTGAA
AATTTTATGTGTGAATCAGACTCCTGGGCCAAGGACCTGATTGTATCTGCCCTGCTTCTGATTC
AGTACCACCTGGCACAGGGAGGAAGGATGGATGCTCAGAGCTTCCTGGAAGCCGCCGCCAGCAC
CAATTTTCCCACCAAGTCCTCTCCTGTAGTTCATGATGAGGGCAAAGTTAAGTCTCCTCCCCTT
AAGATATGTGAGCAGGAACAAACAGAAAAGAAAGATCTGATGAGTGTCATCTTCAATTTTATCC
GGAACTTACTCAGTGAGACCATATTCAAGGGTAGCCGTAATTGTGAGTCCAAGGCTCACGAGCA
GATCATTAAGGAAGAAGAGATCAACCTATGTGAAAGGCCTCTGTCTCCATGTGAAAGGCCTATG
TCCCCACCTGTCCCGAAATTCTGTGAGGATGAGGAGGCCACTGGTGGTGCCTTATCTGGGCTAA
CCAAGATGGTCGCCAACCAGCTAGATGGCTGTATGAATGGGCAGATGGTGGAGCATCTGATGGA
CTCGGTGATGAAGTTATGCCTCATTATCGCCAAGTCCTGTGACTCGCCCTTGTCAGAGCTGGGA
GACGAAAAGTGTGGGGATGCCAGCCGGCCGAGTTCTGCCTTCCCAGATAACTTATATGAGTGCT
TACCAGTCAAGGGCACGGGGACAGCCGAAGCCCTCCTGCAGAACGCCTATCTAGCCATCCACAA
CGAACTGAGAGGTTTGTCAGGACAGCCACCCGAGGGCTGTGAAATCCCCAAGGTGATCGTCAGC
AACCACAATCTGGCTGACACTGTCCAGAACAAGCAGCTGCAAGCTGTCCTTCAGTGGGTGGCTG
CCTCAGAGCTCAATGTCCCTATTTTGTACTTCGCTGGTGACGATGAAGGAATCCAGGAGAAGCT
GCTTCAGCTCTCAGCCACTGCTGTGGAGAAAGGCCGAAGCGTCGGGGAGGTTCTGCAGTCGGTG
CTTAGGTATGAGAAGGAGCGACAGCTGGATGAGGCAGTGGGAAATGTCACGCGGCTGCAGCTGC
TGGACTGGCTGATGGCAAACCTGTGATTGGGGCCCACCCGGTGTTCCTGCAGTGGGCCGAGTCC
CTGCCCTCTCAGCCCCTCCCTGCCGCACAGAGCCCTAAAGTTCCCTCCATACCACCCACACTAG
ACACGCCATCTAATGCTACTCACTGGATTTTGCAGATTTTCTTGTCCATGCGAGCAAGGACATA
AATTAAAAGATTACAGTTAAAGGGCA

hide sequence

RefSeq Acc Id:

XM_017592653 ⟹ XP_017448142

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	161,375,833 - 161,400,062 (+)	NCBI
mRatBN7.2	4	159,691,838 - 159,714,067 (+)	NCBI
Rnor_6.0	4	159,403,418 - 159,425,512 (+)	NCBI

Sequence:

show sequence

GACATCACTAGCTGCAATTCTGATGTCACTCCCTAGTCCCAACAAGGAGGAGGTGCATGGAAGG
CTGGGGGAGGAAACAAGATCTTCAGCTGAGTAAGAACATCCCAGCATCTTCATTGACTTTAAAA
GTATATTCTGGAGTCTCCTGTGGTTCACTATTCTAGAGCTTCGGAGAGTCTCTACTGACCAATT
TGGTCCCAGCAGTGGAGTTACAGATGTGAACCACCACACCCAACTTGTTAGGTTCTCCAATTTT
AAGAAAGATGAGCTGCCTGGAATTACAAATGGGCAGGACTTTTATATTCACTCTTTCAACAGAA
AATTACTAAGCACCAACTCTAAAGATGGCGGATAGGGTTGACTGGTTACAAAGTCAAAGTGGCG
TTTGCAAAGTTGGTGTCTATTCACCTGGAGACAACCAACACCAAGACTGGAAAATGGATTCATC
AACAGATCCTGTCCGAGTGCTCAGCTGGCTCCGCAAAGACCTGGAGAAAAGTACAGCAGGGTTC
CAGGACTCGAGGTTCAAGCCTGGAGAATCATCATTTGGGGAGGAAGTGGCTTACCCAGGAGACC
AACGAAAAGGTTTCTGCGTTGATTATTACAATACCACCAACAAGGGCAATCCAGGGAGATTGCA
TTTTGAGATGTCTCACAAGGAGACCCCTCCCCAGGGCCTCATTGCCCATGTTGGTAATGGGGGT
TCCATAGACGAAGTTTCCTTCTACGCCAACCGCCTCACAAACCTAGTGATCGCCATGGCCCGAA
AAGAGATCAATGAGAAGATTCATGGTACTGAAAACAAATGTGTCCACCAGTCATTGTATATGGG
GGATGATCCCACACCCCACAAAAGCTTGAGTACAGTAGCTTCTGAGCTCGTGAATGAGACAGTC
AGTGCATGTTCCAAGAATATTACCGGTGACAAAGCTCCCGGCTCTGGAGACAGGGCCTTGGCGT
CTTCACAGAGCCCTGGTCTAAGATTCACAAGCACTCTGAAGATCAAGGAGAGCACGAAGGAAGG
CAAGTGTCCTGACAACAAGCCTGGTTCTAAGAAGTCCTTCTTCTACAAGGAAGTGTTTGAGTCT
CGGAATGCAGGAGATGCCAAGGAGGGTGGGAGGTCCTTACCTGGAGATAGAAAACTGTTCAGGT
GCCCGGACAGGCCTGACGACTTTTCCAACTCTATCAGTCAAGGGATCATGACCTATGCCAACAG
TGTGGTGTCTGACATGATGGTGTCCATCATGAAGACACTGAAGATCCAGGTAAAAGACACAACC
ATCGCCACTATTCTGCTGAAGAAGGTGTTGATGAAGCATGCAAAAGAGGTTGTCTCCGATCTCA
TCGACTCCTTCATGAAGAACCTCCACAGTGTCACAGGGAGTCTCATGACTGACACAGACTTCGT
CTCAGCTGTGAAGCGAAGTTTTTTTTCTCATGGAAGCCAAAAGGCTACAGATATCATGGATGCC
ATGCTGGGCAAGCTATACAATGTGATGTGTGCCAAGAAATATCCTGAGAACATCAGGAAAGCCA
GGGACAAGTCCGAGAGTTACTCCCTTATCTCCATGAAATCACGACCTGGTGACCCAAAGCTCTC
AAACTTGAACTTTGCGATGAAATCAGAATCAAAACTGAAAGAAAATTTGTTTTCTGCATGCATA
TCAGAGAAAGAGAAGACATGCGCTGAAACTCTGGGTGAGCACATCATTAAGGAGGGACTGAACA
TGTGGCACAAGAGTCAGCAAAATTCTCCTGGCTTGGAGCGTGCCACAAAACAGGGCGCCGTTCC
ACAGGAGGTCTCCTTTGAGTGTCCGGATCCTTGTGAGGTAAACCCTCTTCAGCAACCTCAGCCA
CCAGAGAACTTTGAAAATTTTATGTGTGAATCAGACTCCTGGGCCAAGGACCTGATTGTATCTG
CCCTGCTTCTGATTCAGTACCACCTGGCACAGGGAGGAAGGATGGATGCTCAGAGCTTCCTGGA
AGCCGCCGCCAGCACCAATTTTCCCACCAAGTCCTCTCCTGTAGTTCATGATGAGGGCAAAGTT
AAGTCTCCTCCCCTTAAGATATGTGAGCAGGAACAAACAGAAAAGAAAGATCTGATGAGTGTCA
TCTTCAATTTTATCCGGAACTTACTCAGTGAGACCATATTCAAGGGTAGCCGTAATTGTGAGTC
CAAGGCTCACGAGCAGATCATTAAGGAAGAAGAGATCAACCTATGTGAAAGGCCTCTGTCTCCA
TGTGAAAGGCCTATGTCCCCACCTGTCCCGAAATTCTGTGAGGATGAGGAGGCCACTGGTGGTG
CCTTATCTGGGCTAACCAAGATGGTCGCCAACCAGCTAGATGGCTGTATGAATGGGCAGATGGT
GGAGCATCTGATGGACTCGGTGATGAAGTTATGCCTCATTATCGCCAAGTCCTGTGACTCGCCC
TTGTCAGAGCTGGGAGACGAAAAGTGTGGGGATGCCAGCCGGCCGAGTTCTGCCTTCCCAGATA
ACTTATATGAGTGCTTACCAGTCAAGGGCACGGGGACAGCCGAAGCCCTCCTGCAGAACGCCTA
TCTAGCCATCCACAACGAACTGAGAGGTTTGTCAGGACAGCCACCCGAGGGCTGTGAAATCCCC
AAGGTGATCGTCAGCAACCACAATCTGGCTGACACTGTCCAGAACAAGCAGCTGCAAGCTGTCC
TTCAGTGGGTGGCTGCCTCAGAGCTCAATGTCCCTATTTTGTACTTCGCTGGTGACGATGAAGG
AATCCAGGAGAAGCTGCTTCAGCTCTCAGCCACTGCTGTGGAGAAAGGCCGAAGCGTCGGGGAG
GTTCTGCAGTCGGTGCTTAGGTATGAGAAGGAGCGACAGCTGGATGAGGCAGTGGGAAATGTCA
CGCGGCTGCAGCTGCTGGACTGGCTGATGGCAAACCTGTGATTGGGGCCCACCCGGTGTTCCTG
CAGTGGGCCGAGTCCCTGCCCTCTCAGCCCCTCCCTGCCGCACAGAGCCCTAAAGTTCCCTCCA
TACCACCCACACTAGACACGCCATCTAATGCTACTCACTGGATTTTGCAGATTTTCTTGTCCAT
GCGAGCAAGGACATAAATTAAAAGATTACAGTTAAAGGGCA

hide sequence

RefSeq Acc Id:

XM_017592654 ⟹ XP_017448143

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	161,375,833 - 161,400,062 (+)	NCBI
mRatBN7.2	4	159,691,837 - 159,714,067 (+)	NCBI
Rnor_6.0	4	159,403,417 - 159,425,512 (+)	NCBI

Sequence:

show sequence

TGACATCACTAGCTGCAATTCTGATGTCACTCCCTAGTCCCAACAAGGAGGAGGTGCATGGAAG
GCTGGGGGAGGAAACAAGATCTTCAGCTGAGTAAGAACATCCCAGCATCTTCATTGACTTTAAA
AGTATATTCTGGAGTCTCCTGTGGTTCACTATTCTAGAGCTTCGGAGAGTCTCTACTGACCAAT
TTGGTCCCAGCAGTGGAGTTACAGATGTGAACCACCACACCCAACTTGTTAGATGGCGGATAGG
GTTGACTGGTTACAAAGTCAAAGTGGCGTTTGCAAAGTTGGTGTCTATTCACCTGGAGACAACC
AACACCAAGACTGGAAAATGGATTCATCAACAGATCCTGTCCGAGTGCTCAGCTGGCTCCGCAA
AGACCTGGAGAAAAGTACAGCAGGGTTCCAGGACTCGAGGTTCAAGCCTGGAGAATCATCATTT
GGGGAGGAAGTGGCTTACCCAGGAGACCAACGAAAAGGTTTCTGCGTTGATTATTACAATACCA
CCAACAAGGGCAATCCAGGGAGATTGCATTTTGAGATGTCTCACAAGGAGACCCCTCCCCAGGG
CCTCATTGCCCATGTTGGTAATGGGGGTTCCATAGACGAAGTTTCCTTCTACGCCAACCGCCTC
ACAAACCTAGTGATCGCCATGGCCCGAAAAGAGATCAATGAGAAGATTCATGGTACTGAAAACA
AATGTGTCCACCAGTCATTGTATATGGGGGATGATCCCACACCCCACAAAAGCTTGAGTACAGT
AGCTTCTGAGCTCGTGAATGAGACAGTCAGTGCATGTTCCAAGAATATTACCGGTGACAAAGCT
CCCGGCTCTGGAGACAGGGCCTTGGCGTCTTCACAGAGCCCTGGTCTAAGATTCACAAGCACTC
TGAAGATCAAGGAGAGCACGAAGGAAGGCAAGTGTCCTGACAACAAGCCTGGTTCTAAGAAGTC
CTTCTTCTACAAGGAAGTGTTTGAGTCTCGGAATGCAGGAGATGCCAAGGAGGGTGGGAGGTCC
TTACCTGGAGATAGAAAACTGTTCAGGTGCCCGGACAGGCCTGACGACTTTTCCAACTCTATCA
GTCAAGGGATCATGACCTATGCCAACAGTGTGGTGTCTGACATGATGGTGTCCATCATGAAGAC
ACTGAAGATCCAGGTAAAAGACACAACCATCGCCACTATTCTGCTGAAGAAGGTGTTGATGAAG
CATGCAAAAGAGGTTGTCTCCGATCTCATCGACTCCTTCATGAAGAACCTCCACAGTGTCACAG
GGAGTCTCATGACTGACACAGACTTCGTCTCAGCTGTGAAGCGAAGTTTTTTTTCTCATGGAAG
CCAAAAGGCTACAGATATCATGGATGCCATGCTGGGCAAGCTATACAATGTGATGTGTGCCAAG
AAATATCCTGAGAACATCAGGAAAGCCAGGGACAAGTCCGAGAGTTACTCCCTTATCTCCATGA
AATCACGACCTGGTGACCCAAAGCTCTCAAACTTGAACTTTGCGATGAAATCAGAATCAAAACT
GAAAGAAAATTTGTTTTCTGCATGCATATCAGAGAAAGAGAAGACATGCGCTGAAACTCTGGGT
GAGCACATCATTAAGGAGGGACTGAACATGTGGCACAAGAGTCAGCAAAATTCTCCTGGCTTGG
AGCGTGCCACAAAACAGGGCGCCGTTCCACAGGAGGTCTCCTTTGAGTGTCCGGATCCTTGTGA
GGTAAACCCTCTTCAGCAACCTCAGCCACCAGAGAACTTTGAAAATTTTATGTGTGAATCAGAC
TCCTGGGCCAAGGACCTGATTGTATCTGCCCTGCTTCTGATTCAGTACCACCTGGCACAGGGAG
GAAGGATGGATGCTCAGAGCTTCCTGGAAGCCGCCGCCAGCACCAATTTTCCCACCAAGTCCTC
TCCTGTAGTTCATGATGAGGGCAAAGTTAAGTCTCCTCCCCTTAAGATATGTGAGCAGGAACAA
ACAGAAAAGAAAGATCTGATGAGTGTCATCTTCAATTTTATCCGGAACTTACTCAGTGAGACCA
TATTCAAGGGTAGCCGTAATTGTGAGTCCAAGGCTCACGAGCAGATCATTAAGGAAGAAGAGAT
CAACCTATGTGAAAGGCCTCTGTCTCCATGTGAAAGGCCTATGTCCCCACCTGTCCCGAAATTC
TGTGAGGATGAGGAGGCCACTGGTGGTGCCTTATCTGGGCTAACCAAGATGGTCGCCAACCAGC
TAGATGGCTGTATGAATGGGCAGATGGTGGAGCATCTGATGGACTCGGTGATGAAGTTATGCCT
CATTATCGCCAAGTCCTGTGACTCGCCCTTGTCAGAGCTGGGAGACGAAAAGTGTGGGGATGCC
AGCCGGCCGAGTTCTGCCTTCCCAGATAACTTATATGAGTGCTTACCAGTCAAGGGCACGGGGA
CAGCCGAAGCCCTCCTGCAGAACGCCTATCTAGCCATCCACAACGAACTGAGAGGTTTGTCAGG
ACAGCCACCCGAGGGCTGTGAAATCCCCAAGGTGATCGTCAGCAACCACAATCTGGCTGACACT
GTCCAGAACAAGCAGCTGCAAGCTGTCCTTCAGTGGGTGGCTGCCTCAGAGCTCAATGTCCCTA
TTTTGTACTTCGCTGGTGACGATGAAGGAATCCAGGAGAAGCTGCTTCAGCTCTCAGCCACTGC
TGTGGAGAAAGGCCGAAGCGTCGGGGAGGTTCTGCAGTCGGTGCTTAGGTATGAGAAGGAGCGA
CAGCTGGATGAGGCAGTGGGAAATGTCACGCGGCTGCAGCTGCTGGACTGGCTGATGGCAAACC
TGTGATTGGGGCCCACCCGGTGTTCCTGCAGTGGGCCGAGTCCCTGCCCTCTCAGCCCCTCCCT
GCCGCACAGAGCCCTAAAGTTCCCTCCATACCACCCACACTAGACACGCCATCTAATGCTACTC
ACTGGATTTTGCAGATTTTCTTGTCCATGCGAGCAAGGACATAAATTAAAAGATTACAGTTAAA
GGGCA

hide sequence

RefSeq Acc Id:

XM_039107683 ⟹ XP_038963611

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	161,375,833 - 161,400,062 (+)	NCBI
mRatBN7.2	4	159,691,838 - 159,714,067 (+)	NCBI

RefSeq Acc Id:

XM_039107684 ⟹ XP_038963612

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	161,374,198 - 161,400,062 (+)	NCBI
mRatBN7.2	4	159,688,049 - 159,714,067 (+)	NCBI

RefSeq Acc Id:

XM_063286142 ⟹ XP_063142212

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	161,375,833 - 161,400,062 (+)	NCBI

RefSeq Acc Id:

XM_063286143 ⟹ XP_063142213

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	161,375,833 - 161,400,062 (+)	NCBI

RefSeq Acc Id:

XM_063286144 ⟹ XP_063142214

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	161,375,833 - 161,400,062 (+)	NCBI

RefSeq Acc Id:

XM_063286145 ⟹ XP_063142215

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	161,375,833 - 161,400,062 (+)	NCBI

RefSeq Acc Id:

XM_063286146 ⟹ XP_063142216

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	161,375,833 - 161,400,062 (+)	NCBI

RefSeq Acc Id:

XM_063286147 ⟹ XP_063142217

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	161,375,833 - 161,400,062 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001005557	(Get FASTA)	NCBI Sequence Viewer
	XP_006237550	(Get FASTA)	NCBI Sequence Viewer
	XP_006237551	(Get FASTA)	NCBI Sequence Viewer
	XP_006237554	(Get FASTA)	NCBI Sequence Viewer
	XP_008761511	(Get FASTA)	NCBI Sequence Viewer
	XP_008761512	(Get FASTA)	NCBI Sequence Viewer
	XP_017448142	(Get FASTA)	NCBI Sequence Viewer
	XP_017448143	(Get FASTA)	NCBI Sequence Viewer
	XP_038963611	(Get FASTA)	NCBI Sequence Viewer
	XP_038963612	(Get FASTA)	NCBI Sequence Viewer
	XP_063142212	(Get FASTA)	NCBI Sequence Viewer
	XP_063142213	(Get FASTA)	NCBI Sequence Viewer
	XP_063142214	(Get FASTA)	NCBI Sequence Viewer
	XP_063142215	(Get FASTA)	NCBI Sequence Viewer
	XP_063142216	(Get FASTA)	NCBI Sequence Viewer
	XP_063142217	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH81924	(Get FASTA)	NCBI Sequence Viewer
	EDM01825	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000072217
	ENSRNOP00000072217.2

RefSeq Acc Id:

NP_001005557 ⟸ NM_001005557

- UniProtKB:

Q66HC6 (UniProtKB/TrEMBL), A0A0G2K2E9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MADRVDWLQSQSGVCKVGVYSPGDNQHQDWKMDSSTDPVRVLSWLRKDLEKSTAGFQDSRFKPG
ESSFGEEVAYPGDQRKGFCVDYYNTTNKGNPGRLHFEMSHKETPPQGLIAHVGNGGSIDEVSFY
ANRLTNLVIAMARKEINEKIHGTENKCVHQSLYMGDDPTPHKSLSTVASELVNETVSACSKNIT
GDKAPGSGDRALASSQSPGLRFTSTLKIKESTKEGKCPDNKPGSKKSFFYKEVFESRNAGDAKE
GGRSLPGDRKLFRCPDRPDDFSNSISQGIMTYANSVVSDMMVSIMKTLKIQVKDTTIATILLKK
VLMKHAKEVVSDLIDSFMKNLHSVTGSLMTDTDFVSAVKRSFFSHGSQKATDIMDAMLGKLYNV
MCAKKYPENIRKARDKSESYSLISMKSRPGDPKLSNLNFAMKSESKLKENLFSACISEKEKTCA
ETLGEHIIKEGLNMWHKSQQNSPGLERATKQGAVPQEVSFECPDPCEVNPLQQPQPPENFENFM
CESDSWAKDLIVSALLLIQYHLAQGGRMDAQSFLEAAASTNFPTKSSPVVHDEGKVKSPPLKIC
EQEQTEKKDLMSVIFNFIRNLLSETIFKGSRNCESKAHEQIIKEEEINLCERPLSPCERPMSPP
VPKFCEDEEATGGALSGLTKMVANQLDGCMNGQMVEHLMDSVMKLCLIIAKSCDSPLSELGDEK
CGDASRPSSAFPDNLYECLPVKGTGTAEALLQNAYLAIHNELRGLSGQPPEGCEIPKVIVSNHN
LADTVQNKQLQAVLQWVAASELNVPILYFAGDDEGIQEKLLQLSATAVEKGRSVGEVLQSVLRY
EKERQLDEAVGNVTRLQLLDWLMANL

hide sequence

RefSeq Acc Id:	XP_006237554 ⟸ XM_006237492
- Peptide Label:	isoform X1
- UniProtKB:	Q66HC6 (UniProtKB/TrEMBL), A0A0G2K2E9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADRVDWLQSQSGVCKVGVYSPGDNQHQDWKMDSSTDPVRVLSWLRKDLEKSTAGFQDSRFKPG ESSFGEEVAYPGDQRKGFCVDYYNTTNKGNPGRLHFEMSHKETPPQGLIAHVGNGGSIDEVSFY ANRLTNLVIAMARKEINEKIHGTENKCVHQSLYMGDDPTPHKSLSTVASELVNETVSACSKNIT GDKAPGSGDRALASSQSPGLRFTSTLKIKESTKEGKCPDNKPGSKKSFFYKEVFESRNAGDAKE GGRSLPGDRKLFRCPDRPDDFSNSISQGIMTYANSVVSDMMVSIMKTLKIQVKDTTIATILLKK VLMKHAKEVVSDLIDSFMKNLHSVTGSLMTDTDFVSAVKRSFFSHGSQKATDIMDAMLGKLYNV MCAKKYPENIRKARDKSESYSLISMKSRPGDPKLSNLNFAMKSESKLKENLFSACISEKEKTCA ETLGEHIIKEGLNMWHKSQQNSPGLERATKQGAVPQEVSFECPDPCEVNPLQQPQPPENFENFM CESDSWAKDLIVSALLLIQYHLAQGGRMDAQSFLEAAASTNFPTKSSPVVHDEGKVKSPPLKIC EQEQTEKKDLMSVIFNFIRNLLSETIFKGSRNCESKAHEQIIKEEEINLCERPLSPCERPMSPP VPKFCEDEEATGGALSGLTKMVANQLDGCMNGQMVEHLMDSVMKLCLIIAKSCDSPLSELGDEK CGDASRPSSAFPDNLYECLPVKGTGTAEALLQNAYLAIHNELRGLSGQPPEGCEIPKVIVSNHN LADTVQNKQLQAVLQWVAASELNVPILYFAGDDEGIQEKLLQLSATAVEKGRSVGEVLQSVLRY EKERQLDEAVGNVTRLQLLDWLMANL hide sequence

RefSeq Acc Id:	XP_006237550 ⟸ XM_006237488
- Peptide Label:	isoform X1
- UniProtKB:	Q66HC6 (UniProtKB/TrEMBL), A0A0G2K2E9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADRVDWLQSQSGVCKVGVYSPGDNQHQDWKMDSSTDPVRVLSWLRKDLEKSTAGFQDSRFKPG ESSFGEEVAYPGDQRKGFCVDYYNTTNKGNPGRLHFEMSHKETPPQGLIAHVGNGGSIDEVSFY ANRLTNLVIAMARKEINEKIHGTENKCVHQSLYMGDDPTPHKSLSTVASELVNETVSACSKNIT GDKAPGSGDRALASSQSPGLRFTSTLKIKESTKEGKCPDNKPGSKKSFFYKEVFESRNAGDAKE GGRSLPGDRKLFRCPDRPDDFSNSISQGIMTYANSVVSDMMVSIMKTLKIQVKDTTIATILLKK VLMKHAKEVVSDLIDSFMKNLHSVTGSLMTDTDFVSAVKRSFFSHGSQKATDIMDAMLGKLYNV MCAKKYPENIRKARDKSESYSLISMKSRPGDPKLSNLNFAMKSESKLKENLFSACISEKEKTCA ETLGEHIIKEGLNMWHKSQQNSPGLERATKQGAVPQEVSFECPDPCEVNPLQQPQPPENFENFM CESDSWAKDLIVSALLLIQYHLAQGGRMDAQSFLEAAASTNFPTKSSPVVHDEGKVKSPPLKIC EQEQTEKKDLMSVIFNFIRNLLSETIFKGSRNCESKAHEQIIKEEEINLCERPLSPCERPMSPP VPKFCEDEEATGGALSGLTKMVANQLDGCMNGQMVEHLMDSVMKLCLIIAKSCDSPLSELGDEK CGDASRPSSAFPDNLYECLPVKGTGTAEALLQNAYLAIHNELRGLSGQPPEGCEIPKVIVSNHN LADTVQNKQLQAVLQWVAASELNVPILYFAGDDEGIQEKLLQLSATAVEKGRSVGEVLQSVLRY EKERQLDEAVGNVTRLQLLDWLMANL hide sequence

RefSeq Acc Id:	XP_006237551 ⟸ XM_006237489
- Peptide Label:	isoform X1
- UniProtKB:	Q66HC6 (UniProtKB/TrEMBL), A0A0G2K2E9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADRVDWLQSQSGVCKVGVYSPGDNQHQDWKMDSSTDPVRVLSWLRKDLEKSTAGFQDSRFKPG ESSFGEEVAYPGDQRKGFCVDYYNTTNKGNPGRLHFEMSHKETPPQGLIAHVGNGGSIDEVSFY ANRLTNLVIAMARKEINEKIHGTENKCVHQSLYMGDDPTPHKSLSTVASELVNETVSACSKNIT GDKAPGSGDRALASSQSPGLRFTSTLKIKESTKEGKCPDNKPGSKKSFFYKEVFESRNAGDAKE GGRSLPGDRKLFRCPDRPDDFSNSISQGIMTYANSVVSDMMVSIMKTLKIQVKDTTIATILLKK VLMKHAKEVVSDLIDSFMKNLHSVTGSLMTDTDFVSAVKRSFFSHGSQKATDIMDAMLGKLYNV MCAKKYPENIRKARDKSESYSLISMKSRPGDPKLSNLNFAMKSESKLKENLFSACISEKEKTCA ETLGEHIIKEGLNMWHKSQQNSPGLERATKQGAVPQEVSFECPDPCEVNPLQQPQPPENFENFM CESDSWAKDLIVSALLLIQYHLAQGGRMDAQSFLEAAASTNFPTKSSPVVHDEGKVKSPPLKIC EQEQTEKKDLMSVIFNFIRNLLSETIFKGSRNCESKAHEQIIKEEEINLCERPLSPCERPMSPP VPKFCEDEEATGGALSGLTKMVANQLDGCMNGQMVEHLMDSVMKLCLIIAKSCDSPLSELGDEK CGDASRPSSAFPDNLYECLPVKGTGTAEALLQNAYLAIHNELRGLSGQPPEGCEIPKVIVSNHN LADTVQNKQLQAVLQWVAASELNVPILYFAGDDEGIQEKLLQLSATAVEKGRSVGEVLQSVLRY EKERQLDEAVGNVTRLQLLDWLMANL hide sequence

RefSeq Acc Id:	XP_008761512 ⟸ XM_008763290
- Peptide Label:	isoform X1
- UniProtKB:	Q66HC6 (UniProtKB/TrEMBL), A0A0G2K2E9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADRVDWLQSQSGVCKVGVYSPGDNQHQDWKMDSSTDPVRVLSWLRKDLEKSTAGFQDSRFKPG ESSFGEEVAYPGDQRKGFCVDYYNTTNKGNPGRLHFEMSHKETPPQGLIAHVGNGGSIDEVSFY ANRLTNLVIAMARKEINEKIHGTENKCVHQSLYMGDDPTPHKSLSTVASELVNETVSACSKNIT GDKAPGSGDRALASSQSPGLRFTSTLKIKESTKEGKCPDNKPGSKKSFFYKEVFESRNAGDAKE GGRSLPGDRKLFRCPDRPDDFSNSISQGIMTYANSVVSDMMVSIMKTLKIQVKDTTIATILLKK VLMKHAKEVVSDLIDSFMKNLHSVTGSLMTDTDFVSAVKRSFFSHGSQKATDIMDAMLGKLYNV MCAKKYPENIRKARDKSESYSLISMKSRPGDPKLSNLNFAMKSESKLKENLFSACISEKEKTCA ETLGEHIIKEGLNMWHKSQQNSPGLERATKQGAVPQEVSFECPDPCEVNPLQQPQPPENFENFM CESDSWAKDLIVSALLLIQYHLAQGGRMDAQSFLEAAASTNFPTKSSPVVHDEGKVKSPPLKIC EQEQTEKKDLMSVIFNFIRNLLSETIFKGSRNCESKAHEQIIKEEEINLCERPLSPCERPMSPP VPKFCEDEEATGGALSGLTKMVANQLDGCMNGQMVEHLMDSVMKLCLIIAKSCDSPLSELGDEK CGDASRPSSAFPDNLYECLPVKGTGTAEALLQNAYLAIHNELRGLSGQPPEGCEIPKVIVSNHN LADTVQNKQLQAVLQWVAASELNVPILYFAGDDEGIQEKLLQLSATAVEKGRSVGEVLQSVLRY EKERQLDEAVGNVTRLQLLDWLMANL hide sequence

RefSeq Acc Id:	XP_008761511 ⟸ XM_008763289
- Peptide Label:	isoform X1
- UniProtKB:	Q66HC6 (UniProtKB/TrEMBL), A0A0G2K2E9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADRVDWLQSQSGVCKVGVYSPGDNQHQDWKMDSSTDPVRVLSWLRKDLEKSTAGFQDSRFKPG ESSFGEEVAYPGDQRKGFCVDYYNTTNKGNPGRLHFEMSHKETPPQGLIAHVGNGGSIDEVSFY ANRLTNLVIAMARKEINEKIHGTENKCVHQSLYMGDDPTPHKSLSTVASELVNETVSACSKNIT GDKAPGSGDRALASSQSPGLRFTSTLKIKESTKEGKCPDNKPGSKKSFFYKEVFESRNAGDAKE GGRSLPGDRKLFRCPDRPDDFSNSISQGIMTYANSVVSDMMVSIMKTLKIQVKDTTIATILLKK VLMKHAKEVVSDLIDSFMKNLHSVTGSLMTDTDFVSAVKRSFFSHGSQKATDIMDAMLGKLYNV MCAKKYPENIRKARDKSESYSLISMKSRPGDPKLSNLNFAMKSESKLKENLFSACISEKEKTCA ETLGEHIIKEGLNMWHKSQQNSPGLERATKQGAVPQEVSFECPDPCEVNPLQQPQPPENFENFM CESDSWAKDLIVSALLLIQYHLAQGGRMDAQSFLEAAASTNFPTKSSPVVHDEGKVKSPPLKIC EQEQTEKKDLMSVIFNFIRNLLSETIFKGSRNCESKAHEQIIKEEEINLCERPLSPCERPMSPP VPKFCEDEEATGGALSGLTKMVANQLDGCMNGQMVEHLMDSVMKLCLIIAKSCDSPLSELGDEK CGDASRPSSAFPDNLYECLPVKGTGTAEALLQNAYLAIHNELRGLSGQPPEGCEIPKVIVSNHN LADTVQNKQLQAVLQWVAASELNVPILYFAGDDEGIQEKLLQLSATAVEKGRSVGEVLQSVLRY EKERQLDEAVGNVTRLQLLDWLMANL hide sequence

RefSeq Acc Id:	XP_017448143 ⟸ XM_017592654
- Peptide Label:	isoform X1
- UniProtKB:	Q66HC6 (UniProtKB/TrEMBL), A0A0G2K2E9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADRVDWLQSQSGVCKVGVYSPGDNQHQDWKMDSSTDPVRVLSWLRKDLEKSTAGFQDSRFKPG ESSFGEEVAYPGDQRKGFCVDYYNTTNKGNPGRLHFEMSHKETPPQGLIAHVGNGGSIDEVSFY ANRLTNLVIAMARKEINEKIHGTENKCVHQSLYMGDDPTPHKSLSTVASELVNETVSACSKNIT GDKAPGSGDRALASSQSPGLRFTSTLKIKESTKEGKCPDNKPGSKKSFFYKEVFESRNAGDAKE GGRSLPGDRKLFRCPDRPDDFSNSISQGIMTYANSVVSDMMVSIMKTLKIQVKDTTIATILLKK VLMKHAKEVVSDLIDSFMKNLHSVTGSLMTDTDFVSAVKRSFFSHGSQKATDIMDAMLGKLYNV MCAKKYPENIRKARDKSESYSLISMKSRPGDPKLSNLNFAMKSESKLKENLFSACISEKEKTCA ETLGEHIIKEGLNMWHKSQQNSPGLERATKQGAVPQEVSFECPDPCEVNPLQQPQPPENFENFM CESDSWAKDLIVSALLLIQYHLAQGGRMDAQSFLEAAASTNFPTKSSPVVHDEGKVKSPPLKIC EQEQTEKKDLMSVIFNFIRNLLSETIFKGSRNCESKAHEQIIKEEEINLCERPLSPCERPMSPP VPKFCEDEEATGGALSGLTKMVANQLDGCMNGQMVEHLMDSVMKLCLIIAKSCDSPLSELGDEK CGDASRPSSAFPDNLYECLPVKGTGTAEALLQNAYLAIHNELRGLSGQPPEGCEIPKVIVSNHN LADTVQNKQLQAVLQWVAASELNVPILYFAGDDEGIQEKLLQLSATAVEKGRSVGEVLQSVLRY EKERQLDEAVGNVTRLQLLDWLMANL hide sequence

RefSeq Acc Id:	XP_017448142 ⟸ XM_017592653
- Peptide Label:	isoform X1
- UniProtKB:	Q66HC6 (UniProtKB/TrEMBL), A0A0G2K2E9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADRVDWLQSQSGVCKVGVYSPGDNQHQDWKMDSSTDPVRVLSWLRKDLEKSTAGFQDSRFKPG ESSFGEEVAYPGDQRKGFCVDYYNTTNKGNPGRLHFEMSHKETPPQGLIAHVGNGGSIDEVSFY ANRLTNLVIAMARKEINEKIHGTENKCVHQSLYMGDDPTPHKSLSTVASELVNETVSACSKNIT GDKAPGSGDRALASSQSPGLRFTSTLKIKESTKEGKCPDNKPGSKKSFFYKEVFESRNAGDAKE GGRSLPGDRKLFRCPDRPDDFSNSISQGIMTYANSVVSDMMVSIMKTLKIQVKDTTIATILLKK VLMKHAKEVVSDLIDSFMKNLHSVTGSLMTDTDFVSAVKRSFFSHGSQKATDIMDAMLGKLYNV MCAKKYPENIRKARDKSESYSLISMKSRPGDPKLSNLNFAMKSESKLKENLFSACISEKEKTCA ETLGEHIIKEGLNMWHKSQQNSPGLERATKQGAVPQEVSFECPDPCEVNPLQQPQPPENFENFM CESDSWAKDLIVSALLLIQYHLAQGGRMDAQSFLEAAASTNFPTKSSPVVHDEGKVKSPPLKIC EQEQTEKKDLMSVIFNFIRNLLSETIFKGSRNCESKAHEQIIKEEEINLCERPLSPCERPMSPP VPKFCEDEEATGGALSGLTKMVANQLDGCMNGQMVEHLMDSVMKLCLIIAKSCDSPLSELGDEK CGDASRPSSAFPDNLYECLPVKGTGTAEALLQNAYLAIHNELRGLSGQPPEGCEIPKVIVSNHN LADTVQNKQLQAVLQWVAASELNVPILYFAGDDEGIQEKLLQLSATAVEKGRSVGEVLQSVLRY EKERQLDEAVGNVTRLQLLDWLMANL hide sequence

Ensembl Acc Id:

ENSRNOP00000071639 ⟸ ENSRNOT00000079225

Ensembl Acc Id:

ENSRNOP00000072217 ⟸ ENSRNOT00000086525

RefSeq Acc Id:	XP_038963612 ⟸ XM_039107684
- Peptide Label:	isoform X1
- UniProtKB:	Q66HC6 (UniProtKB/TrEMBL), A0A0G2K2E9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038963611 ⟸ XM_039107683
- Peptide Label:	isoform X1
- UniProtKB:	Q66HC6 (UniProtKB/TrEMBL), A0A0G2K2E9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142214 ⟸ XM_063286144
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K2E9 (UniProtKB/TrEMBL), Q66HC6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142217 ⟸ XM_063286147
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K2E9 (UniProtKB/TrEMBL), Q66HC6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142215 ⟸ XM_063286145
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K2E9 (UniProtKB/TrEMBL), Q66HC6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142213 ⟸ XM_063286143
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K2E9 (UniProtKB/TrEMBL), Q66HC6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142216 ⟸ XM_063286146
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K2E9 (UniProtKB/TrEMBL), Q66HC6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063142212 ⟸ XM_063286142
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K2E9 (UniProtKB/TrEMBL), Q66HC6 (UniProtKB/TrEMBL)

Protein Domains

A-kinase anchor 110kDa C-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q66HC6-F1-model_v2	AlphaFold	Q66HC6	1-858	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693417

Promoter ID:

EPDNEW_R3942

Type:

initiation region

Name:

Akap3_1

Description:

A-kinase anchoring protein 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	4	159,403,488 - 159,403,548	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1359735	AgrOrtholog
BioCyc Gene	G2FUF-42960	BioCyc
Ensembl Genes	ENSRNOG00000059227	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000086525	ENTREZGENE
	ENSRNOT00000086525.3	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7112940	IMAGE-MGC_LOAD
InterPro	AKAP_110	UniProtKB/TrEMBL
	AKAP_110_C	UniProtKB/TrEMBL
	SPHK1-interactor_AKAP_110	UniProtKB/TrEMBL
KEGG Report	rno:312720	UniProtKB/TrEMBL
MGC_CLONE	MGC:93915	IMAGE-MGC_LOAD
NCBI Gene	312720	ENTREZGENE
PANTHER	A-KINASE ANCHOR PROTEIN 3	UniProtKB/TrEMBL
	AKAP_110	UniProtKB/TrEMBL
Pfam	AKAP_110	UniProtKB/TrEMBL
PhenoGen	Akap3	PhenoGen
RatGTEx	ENSRNOG00000059227	RatGTEx
SMART	AKAP_110	UniProtKB/TrEMBL
UniProt	A0A0G2K2E9	ENTREZGENE, UniProtKB/TrEMBL
	Q66HC6	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-11-25	Akap3	A-kinase anchoring protein 3	Akap3	A kinase (PRKA) anchor protein 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-30	Akap3	A kinase (PRKA) anchor protein 3		A-kinase anchor protein 3	Name updated	1299863	APPROVED
2005-07-29	Akap3	A-kinase anchor protein 3			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

RGD Manual Annotations