Symbol:
Tcta
Name:
T-cell leukemia translocation altered
RGD ID:
1359333
Description:
Predicted to be involved in negative regulation of osteoclast differentiation and osteoclast fusion. Predicted to be located in membrane. Orthologous to human TCTA (T cell leukemia translocation altered); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; acrylamide.
Type:
protein-coding (Ensembl: lncRNA)
RefSeq Status:
VALIDATED
Previously known as:
LOC306587; similar to RIKEN cDNA 9130410M22; T-cell leukemia translocation altered gene; T-cell leukemia translocation-altered gene protein homolog
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 8 117,867,153 - 117,871,132 (-) NCBI GRCr8 mRatBN7.2 8 108,988,588 - 108,992,324 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 8 108,988,590 - 108,991,564 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 8 114,615,748 - 114,618,708 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 8 112,815,072 - 112,818,032 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 8 110,657,711 - 110,660,671 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 8 117,079,094 - 117,082,338 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 8 117,079,095 - 117,082,162 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 8 116,427,898 - 116,431,164 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 Celera 8 108,291,610 - 108,294,678 (-) NCBI Celera Cytogenetic Map 8 q32 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Tcta (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 8 117,867,153 - 117,871,132 (-) NCBI GRCr8 mRatBN7.2 8 108,988,588 - 108,992,324 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 8 108,988,590 - 108,991,564 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 8 114,615,748 - 114,618,708 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 8 112,815,072 - 112,818,032 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 8 110,657,711 - 110,660,671 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 8 117,079,094 - 117,082,338 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 8 117,079,095 - 117,082,162 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 8 116,427,898 - 116,431,164 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 Celera 8 108,291,610 - 108,294,678 (-) NCBI Celera Cytogenetic Map 8 q32 NCBI
TCTA (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 3 49,412,423 - 49,416,476 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 3 49,412,212 - 49,416,476 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 3 49,449,856 - 49,453,909 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 3 49,424,643 - 49,428,913 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 3 49,424,642 - 49,428,912 NCBI Celera 3 49,414,426 - 49,418,696 (+) NCBI Celera Cytogenetic Map 3 p21.31 NCBI HuRef 3 49,509,361 - 49,513,631 (+) NCBI HuRef CHM1_1 3 49,402,406 - 49,406,676 (+) NCBI CHM1_1 T2T-CHM13v2.0 3 49,441,802 - 49,445,855 (+) NCBI T2T-CHM13v2.0
Tcta (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 9 108,180,157 - 108,183,174 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 9 108,180,157 - 108,183,359 (-) Ensembl GRCm39 Ensembl GRCm38 9 108,302,955 - 108,306,159 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 9 108,302,958 - 108,306,160 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 9 108,205,289 - 108,208,282 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 9 108,161,051 - 108,164,044 (-) NCBI MGSCv36 mm8 Celera 9 107,912,001 - 107,914,995 (-) NCBI Celera Cytogenetic Map 9 F2 NCBI cM Map 9 59.2 NCBI
Tcta (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955532 1,347,639 - 1,349,864 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955532 1,347,639 - 1,349,864 (+) NCBI ChiLan1.0 ChiLan1.0
TCTA (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 2 49,394,560 - 49,398,654 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 3 49,399,352 - 49,403,426 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 3 49,340,010 - 49,344,288 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 3 50,584,614 - 50,588,891 (+) NCBI panpan1.1 PanPan1.1 panPan2
TCTA (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 20 39,820,845 - 39,824,526 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 20 39,822,211 - 39,824,200 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 20 39,739,296 - 39,742,977 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 20 40,177,073 - 40,180,753 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 20 40,177,073 - 40,180,399 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 20 39,544,617 - 39,548,297 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 20 39,948,238 - 39,951,919 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 20 40,227,822 - 40,231,502 (-) NCBI UU_Cfam_GSD_1.0
Tcta (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405602 64,285,293 - 64,288,579 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936529 1,045,798 - 1,050,384 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936529 1,045,735 - 1,047,922 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
TCTA (Sus scrofa - pig)
TCTA (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 22 10,809,342 - 10,813,655 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 22 10,809,595 - 10,812,029 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666041 156,200,733 - 156,205,008 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Tcta (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 134 Count of miRNA genes: 109 Interacting mature miRNAs: 113 Transcripts: ENSRNOT00000075241 Prediction methods: Miranda, Rnahybrid Result types: miRGate_prediction
2303171 Bp331 Blood pressure QTL 331 5.57 0.005 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 8 61290298 119084929 Rat 1549909 Stresp11 Stress response QTL 11 6.83 0.0019 stress-related behavior trait (VT:0010451) number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960) 8 73473045 118473045 Rat 631210 Bw3 Body weight QTL3 5.9 mesenteric fat pad mass (VT:0010427) mesenteric fat pad weight to body weight ratio (CMO:0000654) 8 69349194 112783834 Rat 1358903 Bp252 Blood pressure QTL 252 7 0.0001 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 8 93965141 123900184 Rat 1554321 Bmd3 Bone mineral density QTL 3 7.9 0.0001 femur mineral mass (VT:0010011) volumetric bone mineral density (CMO:0001553) 8 40952565 123900184 Rat 9590292 Uminl3 Urine mineral level QTL 3 3.62 0.001 urine mineral amount (VT:0015086) urine electrolyte level (CMO:0000593) 8 71888757 116888757 Rat 8694446 Bw170 Body weight QTL 170 12.07 0.001 retroperitoneal fat pad mass (VT:0010430) retroperitoneal fat pad weight to body weight ratio (CMO:0000635) 8 71888757 116888757 Rat 631650 Stl6 Serum triglyceride level QTL 6 4 0.0019 blood triglyceride amount (VT:0002644) plasma triglyceride level (CMO:0000548) 8 10378157 112202585 Rat 631653 Bp125 Blood pressure QTL 125 3.3 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 8 66142385 111142385 Rat 1581557 Eae16 Experimental allergic encephalomyelitis QTL 16 3.8 nervous system integrity trait (VT:0010566) experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046) 8 8462195 110921472 Rat 738011 Anxrr9 Anxiety related response QTL 9 6.1 exploratory behavior trait (VT:0010471) number of entries into a discrete space in an experimental apparatus (CMO:0000960) 8 93535351 123900184 Rat 724539 Cm19 Cardiac mass QTL 19 2.6 heart mass (VT:0007028) calculated heart weight (CMO:0000073) 8 100149864 120994388 Rat 70197 BpQTLcluster8 Blood pressure QTL cluster 8 3.482 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 8 46531639 119088626 Rat 738014 Anxrr15 Anxiety related response QTL 15 3.6 0.005 locomotor behavior trait (VT:0001392) amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) 8 95718998 123900184 Rat 2300182 Bmd56 Bone mineral density QTL 56 5.4 femur mineral mass (VT:0010011) volumetric bone mineral density (CMO:0001553) 8 95718998 123900184 Rat 2300181 Bmd55 Bone mineral density QTL 55 5.7 0.0001 femur mineral mass (VT:0010011) volumetric bone mineral density (CMO:0001553) 8 76468691 121468691 Rat 1300171 Bp184 Blood pressure QTL 184 3.66 arterial blood pressure trait (VT:2000000) blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) 8 70513503 118219066 Rat 1358893 Bp263 Blood pressure QTL 263 5.01 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 8 93965141 123900184 Rat 2313400 Anxrr25 Anxiety related response QTL 25 aggression-related behavior trait (VT:0015014) tameness/aggressiveness composite score (CMO:0002136) 8 89265192 114019816 Rat 8694200 Abfw4 Abdominal fat weight QTL 4 9.07 0.001 visceral adipose mass (VT:0010063) abdominal fat pad weight to body weight ratio (CMO:0000095) 8 71888757 116888757 Rat 8694392 Bw161 Body weight QTL 161 8.06 0.001 body lean mass (VT:0010483) lean tissue morphological measurement (CMO:0002184) 8 71888757 116888757 Rat 61437 Cia6 Collagen induced arthritis QTL 6 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 8 82460758 122812818 Rat
RH128269
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 8 108,988,695 - 108,988,905 (+) MAPPER mRatBN7.2 Rnor_6.0 8 117,079,202 - 117,079,411 NCBI Rnor6.0 Rnor_5.0 8 116,428,006 - 116,428,215 UniSTS Rnor5.0 Celera 8 108,291,718 - 108,291,927 UniSTS RH 3.4 Map 8 1118.6 UniSTS Cytogenetic Map 16 q12.5 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000075241 ⟹ ENSRNOP00000067537
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 8 108,988,590 - 108,991,564 (+) Ensembl Rnor_6.0 Ensembl 8 117,079,095 - 117,082,162 (-) Ensembl
RefSeq Acc Id:
NM_001014005 ⟹ NP_001014027
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 8 117,867,153 - 117,870,112 (-) NCBI mRatBN7.2 8 108,988,588 - 108,991,547 (-) NCBI Rnor_6.0 8 117,079,094 - 117,082,162 (-) NCBI Rnor_5.0 8 116,427,898 - 116,431,164 (-) NCBI Celera 8 108,291,610 - 108,294,678 (-) NCBI
Sequence:
TGCCAACACTTCGCGCAAGCGAAGTAGATCTTCCTTGCTTTATATTACGCGTGCGCACTGACAGGCCTAACCCCGGAAGACCATACGCTTGCGCAGTGGAGACTACAGTGACAGTACACCCGGTGGGG CGCTGGCCAGTCATGGCGGAGCCTTGGGCTGGGCAGTTTCTGCAAGCTTTGCCCGCCACGGTGCTCGGAGCGCTGGGCACCCTGGGCAGCGAGTTTCTGCGGGAGTGGGAGACACAAGATATGCGAGT GACTCTCTTCAAGCTTCTCCTGCTTTGGTTGGTGTTAAGTCTCCTGGGCATCCAGCTGGCGTGGGGGTTCTACGGGAACACAGTGACCGGGTTGTATCACCGTCCAGGTCTGGGTGGCCAGAATGGAT CCACACCTGATGGCTCCACACATTTCCCTTCATGGGAAATGGCAGCAAATGAAGCTCTCAAAACTCACAGAGAATAAAGGAAGGCAGCAGGAGAAGGGTCTCCAGAGATATCGCTGGGTCTGCTGGCT CCTGTGCTGTACCTTGCTGCTATCCAGACCCCTTAGGCAACTGCAGAGGGCTTGGGGTTGGGGGACTGGAGTACCATGATGCTCCCAGGGTGAGCCTCCACTGCCCTCAGCCTTGCCTCCAACAGCGT CAGGTACTGGGCAGGTGAAGTTTGTCTCCAACAAACGGAAAGCCTTCTTGTCAAGGTCATAGCTGAGAAACATTTTGGTTGAGGAGGTCAGTAGTCCCTTTTCTCACCTTGGCTTTTTCCTGACTTAC TCATCCCCTTGGGGATGTGATCTTAAGAGTAGTTTGTCTTTGTAAGAGAAATCTTGAGGTTAGCCAGTTCTGAGATTTAGAAGGAAAGTCCATTCTCCCATGGGCCCTGATTTCCTTGACCTCGCTTT GTAGGCAGAAAGCCAGCTAATCCTGGCCTGGATGAGGGCACCAAACCTGTCCCTCCCTGGCCCATCTAGAATTGTCCAGGTCTGAGGCAGGCGAGGAAGTTATCACTTCCCAACGGACTTATTTCTGT TCTTTTTGAGGACAAGTTGAGTCCCTGAGACATCTCACTAAGAGCCCCTGGCATTGGCTAGCTTCTCCACTGTTTCAGTACCCACAGGCTTCTTTGGTCTGTACTCGCCCCCGCCTAGGGAGGTACTA AGCAGTTAGTGCAGTGACTTCATTGTGCCCTGCTGCCTTATTACTTCCCATCTTGAGAAGGGCCTCGCCCTGAGAGTCCACCAGCATCATTTTAGCCCCTAGGACTATCAGTAAGAGTGAGCTGCAAG CCAGATAGTTGTGGACCCTCCCCCAAGGGGGTGGGTGGCCAATGTCCCCATGAAAACACCACATCCTGAGAGCACTATGGTTCCTAAGAGCATTGTGGTCTTGGATCTGCCTCCTCTAATGGTTGTAC TCCTGTCTCTGCTGGGCTACTAGCTACCTCAGGTGTCCACTGTCTTTGTTAGATGTCACATAGCCACCTGGCAGCCATTGCCTACAGGGACTTTGTAGCAGGTGTACTGTGGGTGAAACTATGGAGCT CCTCGTGCACATGTACCTACTCCAGAGATGTCATCTGTGTGGCAGAAAGATGTTCTTCACAGCCTCATGCCCACCCACTGACATCACTACAAGAGTCAAGGTCTCACATTCCACCCCAGGAGCAACTG AAGATGTGACTTATTAAACACAGAAGTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
hide sequence
RefSeq Acc Id:
NM_001401234 ⟹ NP_001388163
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 8 117,867,153 - 117,870,112 (-) NCBI mRatBN7.2 8 108,988,588 - 108,991,547 (-) NCBI
RefSeq Acc Id:
XM_008766514 ⟹ XP_008764736
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 8 117,867,153 - 117,871,132 (-) NCBI mRatBN7.2 8 108,988,588 - 108,992,321 (-) NCBI Rnor_6.0 8 117,079,094 - 117,082,338 (-) NCBI
Sequence:
ATCCACGCCCTAAAAGCCAGACGCTTAACCAATCACGGCAGTCGCGTGGAGCATCACGGGAACT CCGGGGCTATAAAAGACCGAGTTGCTATTTTATACTCACCGAATCACTCATCCTCTAAGCCTAACCCCGGAAGACCATACGCTTGCGCAGTGGAGACTACAGTGACAGTACACCCGGTGGGGCGCTGG CCAGTCATGGCGGAGCCTTGGGCTGGGCAGTTTCTGCAAGCTTTGCCCGCCACGGTGCTCGGAGCGCTGGGCACCCTGGGCAGCGAGTTTCTGCGGGAGTGGGAGACACAAGATATGCGAGTGACTCT CTTCAAGCTTCTCCTGCTTTGGTTGGTGTTAAGTCTCCTGGGCATCCAGCTGGCGTGGGGGTTCTACGGGAACACAGTGACCGGGTTGTATCACCGTCCAGGGAAATGGCAGCAAATGAAGCTCTCAA AACTCACAGAGAATAAAGGAAGGCAGCAGGAGAAGGGTCTCCAGAGATATCGCTGGGTCTGCTGGCTCCTGTGCTGTACCTTGCTGCTATCCAGACCCCTTAGGCAACTGCAGAGGGCTTGGGGTTGG GGGACTGGAGTACCATGATGCTCCCAGGGTGAGCCTCCACTGCCCTCAGCCTTGCCTCCAACAGCGTCAGGTACTGGGCAGGTGAAGTTTGTCTCCAACAAACGGAAAGCCTTCTTGTCAAGGTCATA GCTGAGAAACATTTTGGTTGAGGAGGTCAGTAGTCCCTTTTCTCACCTTGGCTTTTTCCTGACTTACTCATCCCCTTGGGGATGTGATCTTAAGAGTAGTTTGTCTTTGTAAGAGAAATCTTGAGGTT AGCCAGTTCTGAGATTTAGAAGGAAAGTCCATTCTCCCATGGGCCCTGATTTCCTTGACCTCGCTTTGTAGGCAGAAAGCCAGCTAATCCTGGCCTGGATGAGGGCACCAAACCTGTCCCTCCCTGGC CCATCTAGAATTGTCCAGGTCTGAGGCAGGCGAGGAAGTTATCACTTCCCAACGGACTTATTTCTGTTCTTTTTGAGGACAAGTTGAGTCCCTGAGACATCTCACTAAGAGCCCCTGGCATTGGCTAG CTTCTCCACTGTTTCAGTACCCACAGGCTTCTTTGGTCTGTACTCGCCCCCGCCTAGGGAGGTACTAAGCAGTTAGTGCAGTGACTTCATTGTGCCCTGCTGCCTTATTACTTCCCATCTTGAGAAGG GCCTCGCCCTGAGAGTCCACCAGCATCATTTTAGCCCCTAGGACTATCAGTAAGAGTGAGCTGCAAGCCAGATAGTTGTGGACCCTCCCCCAAGGGGGTGGGTGGCCAATGTCCCCATGAAAACACCA CATCCTGAGAGCACTATGGTTCCTAAGAGCATTGTGGTCTTGGATCTGCCTCCTCTAATGGTTGTACTCCTGTCTCTGCTGGGCTACTAGCTACCTCAGGTGTCCACTGTCTTTGTTAGATGTCACAT AGCCACCTGGCAGCCATTGCCTACAGGGACTTTGTAGCAGGTGTACTGTGGGTGAAACTATGGAGCTCCTCGTGCACATGTACCTACTCCAGAGATGTCATCTGTGTGGCAGAAAGATGTTCTTCACA GCCTCATGCCCACCCACTGACATCACTACAAGAGTCAAGGTCTCACATTCCACCCCAGGAGCAACTGAAGATGTGACTTATTAAACACAGAAGTGCA
hide sequence
RefSeq Acc Id:
XM_039081326 ⟹ XP_038937254
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 8 117,867,153 - 117,871,132 (-) NCBI mRatBN7.2 8 108,988,588 - 108,992,324 (-) NCBI
RefSeq Acc Id:
XM_039081327 ⟹ XP_038937255
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 8 117,867,153 - 117,871,132 (-) NCBI mRatBN7.2 8 108,988,588 - 108,992,323 (-) NCBI
RefSeq Acc Id:
XM_039081328 ⟹ XP_038937256
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 8 117,867,153 - 117,871,132 (-) NCBI mRatBN7.2 8 108,988,588 - 108,992,314 (-) NCBI
RefSeq Acc Id:
NP_001014027 ⟸ NM_001014005
- Peptide Label:
isoform 2
- UniProtKB:
Q5XIF1 (UniProtKB/Swiss-Prot), A6I345 (UniProtKB/TrEMBL)
- Sequence:
MAEPWAGQFLQALPATVLGALGTLGSEFLREWETQDMRVTLFKLLLLWLVLSLLGIQLAWGFYGNTVTGLYHRPGLGGQNGSTPDGSTHFPSWEMAANEALKTHRE
hide sequence
RefSeq Acc Id:
XP_008764736 ⟸ XM_008766514
- Peptide Label:
isoform X1
- Sequence:
MAEPWAGQFLQALPATVLGALGTLGSEFLREWETQDMRVTLFKLLLLWLVLSLLGIQLAWGFYGNTVTGLYHRPGKWQQMKLSKLTENKGRQQEKGLQRYRWVCWLLCCTLLLSRPLRQLQRAWGWGT GVP
hide sequence
Ensembl Acc Id:
ENSRNOP00000067537 ⟸ ENSRNOT00000075241
RefSeq Acc Id:
XP_038937254 ⟸ XM_039081326
- Peptide Label:
isoform X2
RefSeq Acc Id:
XP_038937255 ⟸ XM_039081327
- Peptide Label:
isoform X3
RefSeq Acc Id:
XP_038937256 ⟸ XM_039081328
- Peptide Label:
isoform X4
RefSeq Acc Id:
NP_001388163 ⟸ NM_001401234
- Peptide Label:
isoform 1
- UniProtKB:
A6I346 (UniProtKB/TrEMBL)
RGD ID: 13696295
Promoter ID: EPDNEW_R6819
Type: initiation region
Name: Tcta_1
Description: T-cell leukemia translocation altered
SO ACC ID: SO:0000170
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Experiment Methods: Single-end sequencing.
Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 8 117,082,026 - 117,082,086 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2012-10-16
Tcta
T-cell leukemia translocation altered
Tcta
T-cell leukemia translocation altered gene
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2006-03-30
Tcta
T-cell leukemia translocation altered gene
LOC306587
similar to RIKEN cDNA 9130410M22
Symbol and Name updated
1299863
APPROVED
2005-07-29
LOC306587
similar to RIKEN cDNA 9130410M22
Symbol and Name status set to provisional
70820
PROVISIONAL