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Gene: Zfand6 (zinc finger AN1-type containing 6) Rattus norvegicus

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Symbol:

Zfand6

Name:

zinc finger AN1-type containing 6

RGD ID:

1359317

Description:

Predicted to enable polyubiquitin modification-dependent protein binding activity. Predicted to be involved in several processes, including cellular response to tumor necrosis factor; protein targeting to peroxisome; and regulation of canonical NF-kappaB signal transduction. Predicted to act upstream of or within signal transduction. Predicted to be located in cytoplasm. Orthologous to human ZFAND6 (zinc finger AN1-type containing 6); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3H-1,2-dithiole-3-thione; bisphenol A.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

AN1-type zinc finger protein 6; MGC94805; protein associated with PRK1; Za20d3; zgc:101121; zinc finger A20 domain-containing protein 3; zinc finger, A20 domain containing 3; zinc finger, AN1-type domain 6

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ZFAND6 (zinc finger AN1-type containing 6)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Zfand6 (zinc finger, AN1-type domain 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Zfand6 (zinc finger AN1-type containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ZFAND6 (zinc finger AN1-type containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ZFAND6 (zinc finger AN1-type containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Zfand6 (zinc finger AN1-type containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ZFAND6 (zinc finger AN1-type containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ZFAND6 (zinc finger AN1-type containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Zfand6 (zinc finger AN1-type containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Zfand6 (zinc finger AN1-type containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	FOXJ1 (forkhead box J1)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	ZFAND6 (zinc finger AN1-type containing 6)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Zfand6 (zinc finger, AN1-type domain 6)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	zfand6 (zinc finger, AN1-type domain 6)	Alliance	DIOPT (Hieranoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	zfand6 (zinc finger, AN1-type domain 6)	Alliance	DIOPT (Hieranoid\|OMA\|OrthoFinder\|PhylomeDB)
Drosophila melanogaster (fruit fly):	CG15368	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	CG15368	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	F22D6.2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	F22D6.2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG45050	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	zfand6	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	zfand6	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	147,990,099 - 148,061,221 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	147,990,108 - 148,061,134 (-)	Ensembl				GRCr8
mRatBN7.2	1	138,581,002 - 138,652,052 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	138,581,002 - 138,651,939 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	146,533,717 - 146,604,324 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	153,702,718 - 153,773,333 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	146,577,924 - 146,648,533 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	146,745,850 - 146,823,762 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	146,745,859 - 146,823,762 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	147,672,431 - 147,750,196 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	140,885,701 - 140,960,486 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	130,599,032 - 130,612,301 (-)	NCBI		Celera
RGSC_v3.1	1	140,964,112 - 141,038,892 (-)	NCBI
Cytogenetic Map	1	q31	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Arsenic Poisoning (ISO)

Delayed Emergence from Anesthesia (ISO)

skin disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,4-methylenedioxymethamphetamine (ISO)

3H-1,2-dithiole-3-thione (EXP)

all-trans-retinoic acid (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

chromium(6+) (ISO)

clofibrate (ISO)

copper(II) sulfate (ISO)

diazinon (ISO)

dicrotophos (ISO)

dioxygen (ISO)

ethanol (ISO)

folic acid (ISO)

formaldehyde (ISO)

gold atom (ISO)

gold(0) (ISO)

lead diacetate (ISO)

lead(0) (ISO)

levonorgestrel (ISO)

p-chloromercuribenzoic acid (ISO)

paracetamol (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

propiconazole (ISO)

resveratrol (ISO)

rotenone (EXP)

sodium arsenate (ISO)

sodium arsenite (ISO)

testosterone undecanoate (ISO)

thiram (ISO)

trichloroethene (EXP,ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

apoptotic process (IEA)

cellular response to tumor necrosis factor (ISO,ISS)

negative regulation of apoptotic process (ISO,ISS)

protein targeting to peroxisome (IBA,IEA,ISO,ISS)

protein transport (IEA)

regulation of canonical NF-kappaB signal transduction (ISO,ISS)

Cellular Component

cytoplasm (IEA)

Molecular Function

DNA binding (IEA)

metal ion binding (IEA)

polyubiquitin modification-dependent protein binding (IBA,IEA,ISO,ISS)

protein binding (ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Cloning and characterization of AWP1, a novel protein that associates with serine/threonine kinase PRK1 in vivo.	Duan W, etal., Gene 2000 Oct 3;256(1-2):113-21.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	GOA pipeline	RGD automated data pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:15489334	PMID:18813897	PMID:21810480	PMID:21980954	PMID:23336395	PMID:23481562	PMID:27716383

Genomics

Comparative Map Data

Zfand6
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	147,990,099 - 148,061,221 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	147,990,108 - 148,061,134 (-)	Ensembl				GRCr8
mRatBN7.2	1	138,581,002 - 138,652,052 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	138,581,002 - 138,651,939 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	146,533,717 - 146,604,324 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	153,702,718 - 153,773,333 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	146,577,924 - 146,648,533 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	146,745,850 - 146,823,762 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	146,745,859 - 146,823,762 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	147,672,431 - 147,750,196 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	140,885,701 - 140,960,486 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	130,599,032 - 130,612,301 (-)	NCBI		Celera
RGSC_v3.1	1	140,964,112 - 141,038,892 (-)	NCBI
Cytogenetic Map	1	q31	NCBI

ZFAND6
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	80,058,951 - 80,138,393 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	80,058,894 - 80,140,292 (+)	Ensembl			hg38	GRCh38
GRCh37	15	80,352,018 - 80,430,735 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	78,139,076 - 78,217,767 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	15	78,139,075 - 78,217,765	NCBI
Celera	15	57,289,219 - 57,367,921 (+)	NCBI		Celera
Cytogenetic Map	15	q25.1	NCBI
HuRef	15	57,109,927 - 57,188,777 (+)	NCBI		HuRef
CHM1_1	15	80,469,860 - 80,548,702 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	15	77,923,092 - 78,001,808 (+)	NCBI		T2T-CHM13v2.0

Zfand6
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	84,264,253 - 84,339,224 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	84,262,974 - 84,339,167 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	7	84,615,045 - 84,690,016 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	84,613,766 - 84,689,959 (-)	Ensembl			mm10	GRCm38
MGSCv37	7	91,763,564 - 91,827,861 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	7	84,491,239 - 84,555,536 (-)	NCBI		MGSCv36	mm8
Celera	7	82,017,675 - 82,086,800 (-)	NCBI		Celera
Cytogenetic Map	7	D3	NCBI
cM Map	7	48.36	NCBI

Zfand6
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955533	877,985 - 894,934 (+)	Ensembl
ChiLan1.0	NW_004955533	823,883 - 895,713 (+)	NCBI	ChiLan1.0	ChiLan1.0

ZFAND6
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	69,306,795 - 69,392,607 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	73,471,591 - 73,557,324 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	59,023,678 - 59,107,270 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	77,996,265 - 78,067,171 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	78,048,571 - 78,115,098 (+)	Ensembl			panPan2	panpan1.1

ZFAND6
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	57,341,757 - 57,406,205 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	57,342,448 - 57,406,182 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	60,000,188 - 60,064,463 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	57,768,504 - 57,833,026 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	57,768,543 - 57,823,947 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	57,274,102 - 57,338,400 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	57,480,865 - 57,545,311 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	57,827,874 - 57,892,235 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Zfand6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	120,215,856 - 120,279,115 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	38,063,981 - 38,127,191 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	38,063,932 - 38,127,190 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZFAND6
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	48,967,579 - 49,034,703 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	48,967,402 - 49,034,711 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	54,475,829 - 54,542,954 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZFAND6
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	3,274,721 - 3,356,873 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	3,274,194 - 3,314,527 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666048	138,518,274 - 138,601,371 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Zfand6
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624941	967,345 - 1,027,018 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624941	953,407 - 1,025,082 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Zfand6
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	115,699,959 - 115,756,672 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Zfand6
678 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	398
Count of miRNA genes:	217
Interacting mature miRNAs:	260
Transcripts:	ENSRNOT00000018098
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61442	Strs1	Sensitivity to stroke QTL 1	7.4		cerebrum integrity trait (VT:0010549)	post-insult time to onset of cerebrovascular lesion (CMO:0002343)	1	131179947	176179947	Rat
1578780	Cm52	Cardiac mass QTL 52	3.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	1	137611478	182611478	Rat
1578654	Bss10	Bone structure and strength QTL 10	4		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	1	51940904	168768703	Rat
1598866	Bp287	Blood pressure QTL 287	5.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	130419227	175419227	Rat
1578770	Stresp23	Stress response QTL 23			kidney sympathetic nerve activity (VT:0004050)	stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786)	1	132760429	191848948	Rat
631684	Bp117	Blood pressure QTL 117	8.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	120082258	165082258	Rat
9590300	Scort16	Serum corticosterone level QTL 16	4.39	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	1	112521556	157521556	Rat
2298545	Neuinf8	Neuroinflammation QTL 8	4.6		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	1	66009857	160501508	Rat
631199	Cm23	Cardiac mass QTL 23	4.6	0.0004	heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	1	142582336	182383862	Rat
2313402	Anxrr24	Anxiety related response QTL 24			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	1	51511344	153680016	Rat
1598850	Bp297	Blood pressure QTL 297	2.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	130419227	175419227	Rat
631570	Bp94	Blood pressure QTL 94		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	132889797	152403053	Rat
152025235	Bw194	Body weight QTL 194	4.86		body mass (VT:0001259)		1	132966869	252856240	Rat
61341	Bp26	Blood pressure QTL 26			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	139442053	223964440	Rat
152025232	Bw192	Body weight QTL 192	3.93		body mass (VT:0001259)		1	127329268	206393015	Rat
724521	Uae1	Urinary albumin excretion QTL 1	3.8	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	99645382	182701046	Rat
1358902	Bw47	Body weight QTL 47	1.67		body mass (VT:0001259)	body weight (CMO:0000012)	1	99645382	221502378	Rat
61346	Rf2	Renal disease susceptibility QTL 2	3.7		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	1	142582180	153680016	Rat
8655649	Arrd1	Age-related retinal degeneration QTL 1	4.89		retinal layer morphology trait (VT:0003727)	percentage of study population developing retinopathy during a period of time (CMO:0002453)	1	109493780	193400781	Rat
2317833	Alcrsp19	Alcohol response QTL 19	12.4	0.001	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	1	110389869	155389869	Rat
1300153	Bp171	Blood pressure QTL 171	3.37		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	1	124975316	152612788	Rat
7771612	Cm80	Cardiac mass QTL 80	8.4		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	1	146080545	243492863	Rat
731168	Bp154	Blood pressure QTL 154	3.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	103779152	223964440	Rat
631202	Gluco13	Glucose level QTL 13		0.0001	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	141173126	169168317	Rat
631205	Bp196	Blood pressure QTL 196	4	0.0001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	98879955	208479939	Rat
631206	Niddm40	Non-insulin dependent diabetes mellitus QTL 40			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	140833106	185833106	Rat
1641897	Alcrsp1	Alcohol response QTL 1			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	1	110389869	155389869	Rat
1331751	Bp199	Blood pressure QTL 199	3.60022		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	1	116099376	191260518	Rat
2293140	Bp313	Blood pressure QTL 313			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	131243790	176243790	Rat
724529	Cm16	Cardiac mass QTL 16	2.7		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	1	96717367	160111531	Rat
737974	Bp161	Blood pressure QTL 161		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	129182274	174182274	Rat
1641895	Bp298	Blood pressure QTL 298			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	132760429	191848948	Rat
631496	Bp97	Blood pressure QTL 97	3.08		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	115183611	176289080	Rat
634314	Niddm44	Non-insulin dependent diabetes mellitus QTL 44			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	51941022	208479811	Rat
1331793	Bp200	Blood pressure QTL 200	3.71601		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	102780511	182384005	Rat
6893347	Bw98	Body weight QTL 98	0.2	0.53	body mass (VT:0001259)	body weight (CMO:0000012)	1	143092939	188092939	Rat
1354591	Cm36	Cardiac mass QTL 36	4.1		heart left ventricle mass (VT:0007031)	calculated heart weight (CMO:0000073)	1	111949780	210707719	Rat
7421630	Bp362	Blood pressure QTL 362		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	128019551	173019551	Rat
70225	Bp58	Blood pressure QTL 58	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34184556	172281316	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34565911	208798288	Rat
631519	Pia11	Pristane induced arthritis QTL 11	5.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	1	93903998	191260518	Rat
61399	Tcat1	Tongue tumor resistance QTL 1	3.3		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 5 mm (CMO:0001879)	1	108680016	153680016	Rat
6893361	Bw104	Body weight QTL 104	0.59	0.27	body mass (VT:0001259)	body weight (CMO:0000012)	1	143092939	188092939	Rat
724562	Rends1	Renal damage susceptibility QTL 1		0.05	kidney glomerulus integrity trait (VT:0010546)	index of glomerular damage (CMO:0001135)	1	139442053	223964440	Rat
724567	Tcas6	Tongue tumor susceptibility QTL 6	6.85		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	1	102359314	153680016	Rat
738006	Anxrr14	Anxiety related response QTL 14	4	0.00035	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	1	140048073	185048073	Rat
1558645	Bw55	Body weight QTL 55	3.2	0.004	body mass (VT:0001259)	body weight (CMO:0000012)	1	143092939	188092939	Rat
1354615	Cm32	Cardiac mass QTL 32	5.2		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	1	111949780	210707719	Rat
634348	Bp138	Blood pressure QTL 138			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	135021436	178317588	Rat
8694370	Bw154	Body weight QTL 154	8.91	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	1	112521556	157521556	Rat
738028	Anxrr12	Anxiety related response QTL 12	4.9	0.00001	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	1	140048073	185048073	Rat
1354623	Rf46	Renal function QTL 46	3.8		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	1	111949780	160574007	Rat
631654	Bp107	Blood pressure QTL 107			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	135021436	180021436	Rat
631544	Bp84	Blood pressure QTL 84	5.6		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	132760429	191190115	Rat
152025212	Bw190	Body weight QTL 190	5.7		body mass (VT:0001259)		1	132966869	206393015	Rat
631549	Bp89	Blood pressure QTL 89	5.7		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	132760429	152404087	Rat
631548	Bp88	Blood pressure QTL 88	5	0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	140915717	185915717	Rat
1358189	Cstrr1	Cold stress response QTL 1		0.0001	catecholamine amount (VT:0010543)	urine norepinephrine level (CMO:0001629)	1	132760429	191848948	Rat
1354606	Bp246	Blood pressure QTL 246	3.6		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	1	111949780	228180370	Rat

Markers in Region

D1Got126

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	138,653,598 - 138,653,747 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	146,837,765 - 146,837,913	NCBI	Rnor6.0
Rnor_6.0	1	146,824,360 - 146,824,508	NCBI	Rnor6.0
Rnor_5.0	1	147,750,794 - 147,750,942	UniSTS	Rnor5.0
Rnor_5.0	1	147,764,387 - 147,764,535	UniSTS	Rnor5.0
RGSC_v3.4	1	140,962,154 - 140,962,302	UniSTS	RGSC3.4
RGSC_v3.4	1	140,962,153 - 140,962,302	RGD	RGSC3.4
Celera	1	130,671,119 - 130,671,267	UniSTS
RGSC_v3.1	1	141,040,560 - 141,040,708	RGD
RH 3.4 Map	1	1108.2	RGD
RH 3.4 Map	1	1108.2	UniSTS
RH 2.0 Map	1	717.9	RGD
Cytogenetic Map	1	q31	UniSTS

D1Got131

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	138,631,855 - 138,632,048 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	146,803,673 - 146,803,865	NCBI	Rnor6.0
Rnor_5.0	1	147,730,107 - 147,730,299	UniSTS	Rnor5.0
RGSC_v3.4	1	140,940,396 - 140,940,589	RGD	RGSC3.4
RGSC_v3.4	1	140,940,397 - 140,940,589	UniSTS	RGSC3.4
Celera	1	130,649,738 - 130,649,908	UniSTS
RGSC_v3.1	1	141,018,802 - 141,018,995	RGD
RH 3.4 Map	1	1110.2	RGD
RH 3.4 Map	1	1110.2	UniSTS
Cytogenetic Map	1	q31	UniSTS

RH128267

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	138,581,136 - 138,581,334 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	146,745,985 - 146,746,182	NCBI	Rnor6.0
Rnor_5.0	4	232,077,651 - 232,078,053	UniSTS	Rnor5.0
Rnor_5.0	1	147,672,566 - 147,672,763	UniSTS	Rnor5.0
RGSC_v3.4	1	140,885,836 - 140,886,033	UniSTS	RGSC3.4
Celera	1	130,599,167 - 130,599,364	UniSTS
Cytogenetic Map	1	q31	UniSTS

RH137620

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	138,608,612 - 138,608,777 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	146,773,467 - 146,773,631	NCBI	Rnor6.0
Rnor_5.0	1	147,700,193 - 147,700,357	UniSTS	Rnor5.0
RGSC_v3.4	1	140,913,269 - 140,913,433	UniSTS	RGSC3.4
Celera	1	130,626,636 - 130,626,800	UniSTS
Cytogenetic Map	1	q31	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001007630	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229499	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229500	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229502	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229504	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229507	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588943	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105750	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284809	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284824	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284825	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284837	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284839	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284840	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284841	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284842	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284851	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284852	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC076394	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473980	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ209493	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ213362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ224861	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000018098 ⟹ ENSRNOP00000018098

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	138,581,016 - 138,651,939 (-)	Ensembl
Rnor_6.0 Ensembl	1	146,745,859 - 146,823,762 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099671 ⟹ ENSRNOP00000088600

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	147,990,108 - 148,061,134 (-)	Ensembl
mRatBN7.2 Ensembl	1	138,581,015 - 138,640,796 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000100459 ⟹ ENSRNOP00000095451

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	147,990,127 - 148,060,973 (-)	Ensembl
mRatBN7.2 Ensembl	1	138,581,002 - 138,640,760 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119528 ⟹ ENSRNOP00000078169

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	138,581,016 - 138,651,939 (-)	Ensembl

RefSeq Acc Id:

NM_001007630 ⟹ NP_001007631

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,061,044 (-)	NCBI
mRatBN7.2	1	138,581,002 - 138,651,946 (-)	NCBI
Rnor_6.0	1	146,745,850 - 146,823,762 (-)	NCBI
Rnor_5.0	1	147,672,431 - 147,750,196 (-)	NCBI
RGSC_v3.4	1	140,885,701 - 140,960,486 (-)	RGD
Celera	1	130,599,032 - 130,612,301 (-)	RGD

Sequence:

show sequence

GCGAGTGGGGGTTCGGCGGCCTCACCTGTCCTCACTCAGCGGCGGCGAGAGGCGGCGGCGGCAG
CGCGTCCGGCGGAGAGGGCCGCCGCCAGGTGTGCAACAGAAGAACATGGCGCAAGAAACTAATC
ACAGCCAAGCACCTATGCTTTGCTCCACTGGCTGCGGATTTTATGGAAACCCTCGTACAAATGG
CATGTGCTCAGTATGCTATAAAGAACATCTTCAAAGACAGAACAGTAGCAATGGTAGAATAAGC
CCACCTGCAGCTTCTGTCAGCAGTCTGTCTGAATCCTTACCAGTACAGTGCGCAGATGGCAGTG
TCCCAGACGCTCAGTCGGCGCTAGATTCTACGTCTTCATCTATGCAGCCAGGCCCTGTATCAAA
TCAGTCACTTTTATCAGAATCTGTAGCACCTTCCCAAGTGGACAGTACATCAGTGGACAAAGCA
GTATCCGAGACAGAAGACCTGCAAGGACCCAGAGCAGAGGGCCTTGTTCCTCTTGAATGTGATC
CTCCATCTTCAGTATCAGATACGACACAGCAGCCATCTGAAGAGCAAAGCAAGTCTCTTGAAAA
ACCAAAACAAAAAAAGAATCGCTGTTTCATGTGCAGGAAGAAAGTGGGACTTACTGGGTTTGAA
TGCCGGTGTGGAAATGTTTACTGTGGTGTGCACCGTTACTCAGATGTTCACAATTGCTCTTACA
ATTACAAAGCTGATGCTGCTGAGAAAATCAGAAAAGAAAATCCAGTAGTTGTTGGTGAAAAGAT
CCAGAAGATTTGAACTCCTGCTGGAATACAAAATCCTTTGACTATCTGCAAACTAAACATTGAC
TTGAGGTTTTTTTTCCTAGTCCTTGGGAATGTAGAGCACCGTATCTTGCATAGACCGTTGAATC
ATGCATGTCATCAGAAGAATAGATTTTTGTTTTTGTTTTGAAAATGACTCTGAACATTTATTTC
CATTGCAGTTTCTGTGGCTGAAAAGAAGTATTATACTTTTAAGATCATTTTAATTTTAGTTGAG
TGCAGAGGGCTTTTATAACAAATGTGGAGAAATTCTGGAGGGCTGTGATTTTTTTCCAGTATTA
AACATGCATGCGTTGATCTTGCAGTTTATTTCTCATTGTGTATGTATATATAGCTTTTCTCTGC
AGCACGATTCCCTTTTGATAAGGCCCTTCTGGGTACAACTAGTTATCAGTAACTGAATGTATCT
TAATCATTACGGCTGCTTCTGTTTGTTTGGTTTTTCATTAACAAAGGTTATACATATGTTAGCA
TATAGTTTCTTTACATCCACTATTTATGTTTGAATCATTTGTCACAGCAGAATATGTGCTGACG
AGATTCTAAATTTGTGGCTTTCGGTTCCTTTTTTTTTTAAACAAGGGAAAGAAAAGCTGAGTGC
ATTTCACTGCTGACTGCAAGTTTCTTTGCGATTACTGTTCATTGGTCTGTGTGTGCACAGTATG
AAGAATGATCTGGTCATTGTGCGGTATTTATGTTTATTCACCAGTCTTTGATTAAATAAAAAGG
AAAACCAGAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006229499 ⟹ XP_006229561

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,061,113 (-)	NCBI
mRatBN7.2	1	138,581,002 - 138,651,987 (-)	NCBI
Rnor_6.0	1	146,745,850 - 146,823,758 (-)	NCBI
Rnor_5.0	1	147,672,431 - 147,750,196 (-)	NCBI

Sequence:

show sequence

GTGGGGGTTCGGCGGCCTCACCTGTCCTCACTCAGCGGCGGCGAGAGGCGGCGGCGGCAGCGCG
TCCGGCGGAGAGGGCCGCCGCCAGGAATGAATCTGAAGTCTGCTGCAGTAAAACACTGAAGGCT
TTAAAATGTTTTCTTGCGTAAAAGTCAAACTTTAAGTAGCTGCTTATGAGGATAGGGAAGGCAG
GAAGCTAATGTCTGTCTCAAGACACAGGACAGCTGTTTGCTCATCAACCTCAACTGTTGCAAGC
AACAGCAGGAAAGACAACTCGACTTAGGGATCTGGGGACTGCTATGCAGAGTTACCAAGCCTAC
AGTACAGTAGGAACTTTAACCTGTCCCTGTTCTTTCATCTGAGTGAGCAGCTTTCCTCCCAAGT
GTTTTCTGTCAAGGTGTGCAACAGAAGAACATGGCGCAAGAAACTAATCACAGCCAAGCACCTA
TGCTTTGCTCCACTGGCTGCGGATTTTATGGAAACCCTCGTACAAATGGCATGTGCTCAGTATG
CTATAAAGAACATCTTCAAAGACAGAACAGTAGCAATGGTAGAATAAGCCCACCTGCAGCTTCT
GTCAGCAGTCTGTCTGAATCCTTACCAGTACAGTGCGCAGATGGCAGTGTCCCAGACGCTCAGT
CGGCGCTAGATTCTACGTCTTCATCTATGCAGCCAGGCCCTGTATCAAATCAGTCACTTTTATC
AGAATCTGTAGCACCTTCCCAAGTGGACAGTACATCAGTGGACAAAGCAGTATCCGAGACAGAA
GACCTGCAAGGACCCAGAGCAGAGGGCCTTGTTCCTCTTGAATGTGATCCTCCATCTTCAGTAT
CAGATACGACACAGCAGCCATCTGAAGAGCAAAGCAAGTCTCTTGAAAAACCAAAACAAAAAAA
GAATCGCTGTTTCATGTGCAGGAAGAAAGTGGGACTTACTGGGTTTGAATGCCGGTGTGGAAAT
GTTTACTGTGGTGTGCACCGTTACTCAGATGTTCACAATTGCTCTTACAATTACAAAGCTGATG
CTGCTGAGAAAATCAGAAAAGAAAATCCAGTAGTTGTTGGTGAAAAGATCCAGAAGATTTGAAC
TCCTGCTGGAATACAAAATCCTTTGACTATCTGCAAACTAAACATTGACTTGAGGTTTTTTTTC
CTAGTCCTTGGGAATGTAGAGCACCGTATCTTGCATAGACCGTTGAATCATGCATGTCATCAGA
AGAATAGATTTTTGTTTTTGTTTTGAAAATGACTCTGAACATTTATTTCCATTGCAGTTTCTGT
GGCTGAAAAGAAGTATTATACTTTTAAGATCATTTTAATTTTAGTTGAGTGCAGAGGGCTTTTA
TAACAAATGTGGAGAAATTCTGGAGGGCTGTGATTTTTTTCCAGTATTAAACATGCATGCGTTG
ATCTTGCAGTTTATTTCTCATTGTGTATGTATATATAGCTTTTCTCTGCAGCACGATTCCCTTT
TGATAAGGCCCTTCTGGGTACAACTAGTTATCAGTAACTGAATGTATCTTAATCATTACGGCTG
CTTCTGTTTGTTTGGTTTTTCATTAACAAAGGTTATACATATGTTAGCATATAGTTTCTTTACA
TCCACTATTTATGTTTGAATCATTTGTCACAGCAGAATATGTGCTGACGAGATTCTAAATTTGT
GGCTTTCGGTTCCTTTTTTTTTTAAACAAGGGAAAGAAAAGCTGAGTGCATTTCACTGCTGACT
GCAAGTTTCTTTGCGATTACTGTTCATTGGTCTGTGTGTGCACAGTATGAAGAATGATCTGGTC
ATTGTGCGGTATTTATGTTTATTCACCAGTCTTTGATTAAATAAAAAGGAAAACCAGAAAAAAA
AA

hide sequence

RefSeq Acc Id:

XM_006229500 ⟹ XP_006229562

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,050,416 (-)	NCBI
mRatBN7.2	1	138,581,002 - 138,641,097 (-)	NCBI
Rnor_6.0	1	146,745,850 - 146,813,727 (-)	NCBI
Rnor_5.0	1	147,672,431 - 147,750,196 (-)	NCBI

Sequence:

show sequence

GTCTCTTAAGAGTCTAGTAAAAATACCATTATGCACAGTTTCTTGGATAGTTTAAAGGGAACAC
ATATTTCATCTACATTTGGTAATAATAATTTCTTTCCTTCCCAACTCTTGGAAGTCTAAAGCAG
CCTACTGCTTAGAAGACTACCTAGTGACTTTCTGGACCAGTCTGAGCTATGTAATAAGGACTCT
GTTCCAAACAAACAAACAAAAAAAAAAGTCAGACCAACACTGGAGAGGGGTTTATGTAAACCTC
CCTAAGCTTTCTACCTGGGAATCACGGCAGGGGGCTTATCTAGTATATTTGAAGCTCTGGGTTA
GATCTTCAACATTGTGAAATAAATTAACTTTGTTCCTGAAAGTGCCATTATACAAATTGCCTCC
TGTCTTTAGCTTTCCTTTTGCCCTGAATAGTCAGTTTTAACCAGAGATAGCAGTCTTTTGGGTC
ACTGAGAACTTTATAGTGTGCTGTGATACCTGAGACTGTGTCAGCAAATTTGACAGATAGCTTA
GAAGTGAGTCTTTAGCATTTAGGGTTTAGCTTAGAAGTGAGTGTTTAGCATTTAGGGTATGCTT
TTTAAATGCTGTTTCTTTTCTTTTCTTTTTTTTTTCCCCCCTTAAATTAATGGTCCTCTAACTA
GGTCTTAGAGAACACGCAGTTTGTTCTTAGCAGAATTTTGTAATGGATTTTTGAGTAGATCTTT
AAGATTTTTCAGATAAAATGTGAAGTCTGTTAAGAGGGAAAAATCTGTTTAAAGTATAACTTTA
TATCCGTGGCTCTGTAAAAATGCCACATCATTTATATTAAAAGCATGTATCTAACACAGCTTAT
CCCCAAGTAAATGAAAGTTGCTTCTGTGAATTTTCATTGTACTTTAACCCAAACAAAAGAAAGC
AACTTGCTTATGATGGGAAAACTGAAACATTACAGCCTGTTTCTTTAAGAAACCAGCTTAGCCA
GGGGTTTAGTGTGTTTAACCTAACCTGCTAGCGAGGAAAAGTTCTTTAAAATAATGGATATTAG
TCGTATCCAATCACAGTCATCAGCCTCACTAACAGGGAGGAGATTTGACTCTCTGGCCACTAGA
ATTGCGGGAGGTGGAGCTTGGTATTCAGGTTTGGTTGCTTTGGAGTACAGCTTCAAGTGAAGTT
AATCTGAGGTGAAGCAAACAGAAAATTGTGGAGGTTTTGTTGGTGTGCAACAGAAGAACATGGC
GCAAGAAACTAATCACAGCCAAGCACCTATGCTTTGCTCCACTGGCTGCGGATTTTATGGAAAC
CCTCGTACAAATGGCATGTGCTCAGTATGCTATAAAGAACATCTTCAAAGACAGAACAGTAGCA
ATGGTAGAATAAGCCCACCTGCAGCTTCTGTCAGCAGTCTGTCTGAATCCTTACCAGTACAGTG
CGCAGATGGCAGTGTCCCAGACGCTCAGTCGGCGCTAGATTCTACGTCTTCATCTATGCAGCCA
GGCCCTGTATCAAATCAGTCACTTTTATCAGAATCTGTAGCACCTTCCCAAGTGGACAGTACAT
CAGTGGACAAAGCAGTATCCGAGACAGAAGACCTGCAAGGACCCAGAGCAGAGGGCCTTGTTCC
TCTTGAATGTGATCCTCCATCTTCAGTATCAGATACGACACAGCAGCCATCTGAAGAGCAAAGC
AAGTCTCTTGAAAAACCAAAACAAAAAAAGAATCGCTGTTTCATGTGCAGGAAGAAAGTGGGAC
TTACTGGGTTTGAATGCCGGTGTGGAAATGTTTACTGTGGTGTGCACCGTTACTCAGATGTTCA
CAATTGCTCTTACAATTACAAAGCTGATGCTGCTGAGAAAATCAGAAAAGAAAATCCAGTAGTT
GTTGGTGAAAAGATCCAGAAGATTTGAACTCCTGCTGGAATACAAAATCCTTTGACTATCTGCA
AACTAAACATTGACTTGAGGTTTTTTTTCCTAGTCCTTGGGAATGTAGAGCACCGTATCTTGCA
TAGACCGTTGAATCATGCATGTCATCAGAAGAATAGATTTTTGTTTTTGTTTTGAAAATGACTC
TGAACATTTATTTCCATTGCAGTTTCTGTGGCTGAAAAGAAGTATTATACTTTTAAGATCATTT
TAATTTTAGTTGAGTGCAGAGGGCTTTTATAACAAATGTGGAGAAATTCTGGAGGGCTGTGATT
TTTTTCCAGTATTAAACATGCATGCGTTGATCTTGCAGTTTATTTCTCATTGTGTATGTATATA
TAGCTTTTCTCTGCAGCACGATTCCCTTTTGATAAGGCCCTTCTGGGTACAACTAGTTATCAGT
AACTGAATGTATCTTAATCATTACGGCTGCTTCTGTTTGTTTGGTTTTTCATTAACAAAGGTTA
TACATATGTTAGCATATAGTTTCTTTACATCCACTATTTATGTTTGAATCATTTGTCACAGCAG
AATATGTGCTGACGAGATTCTAAATTTGTGGCTTTCGGTTCCTTTTTTTTTTAAACAAGGGAAA
GAAAAGCTGAGTGCATTTCACTGCTGACTGCAAGTTTCTTTGCGATTACTGTTCATTGGTCTGT
GTGTGCACAGTATGAAGAATGATCTGGTCATTGTGCGGTATTTATGTTTATTCACCAGTCTTTG
ATTAAATAAAAAGGAAAACCAGAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006229502 ⟹ XP_006229564

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,050,416 (-)	NCBI
mRatBN7.2	1	138,581,002 - 138,641,097 (-)	NCBI
Rnor_6.0	1	146,745,850 - 146,813,727 (-)	NCBI
Rnor_5.0	1	147,672,431 - 147,750,196 (-)	NCBI

Sequence:

show sequence

GTCTCTTAAGAGTCTAGTAAAAATACCATTATGCACAGTTTCTTGGATAGTTTAAAGGGAACAC
ATATTTCATCTACATTTGGTAATAATAATTTCTTTCCTTCCCAACTCTTGGAAGTCTAAAGCAG
CCTACTGCTTAGAAGACTACCTAGTGACTTTCTGGACCAGTCTGAGCTATGTAATAAGGACTCT
GTTCCAAACAAACAAACAAAAAAAAAAGTCAGACCAACACTGGAGAGGGGTTTATGTAAACCTC
CCTAAGCTTTCTACCTGGGAATCACGGCAGGGGGCTTATCTAGTATATTTGAAGCTCTGGGTTA
GATCTTCAACATTGTGAAATAAATTAACTTTGTTCCTGAAAGTGCCATTATACAAATTGCCTCC
TGTCTTTAGCTTTCCTTTTGCCCTGAATAGTCAGTTTTAACCAGAGATAGCAGTCTTTTGGGTC
ACTGAGAACTTTATAGTGTGCTGTGATACCTGAGACTGTGTCAGCAAATTTGACAGATAGCTTA
GAAGTGAGTCTTTAGCATTTAGGGTTTAGCTTAGAAGTGAGTGTTTAGCATTTAGGGTATGCTT
TTTAAATGCTGTTTCTTTTCTTTTCTTTTTTTTTTCCCCCCTTAAATTAATGGTCCTCTAACTA
GGTCTTAGAGAACACGCAGTTTGTTCTTAGCAGAATTTTGTAATGGATTTTTGAGTAGATCTTT
AAGATTTTTCAGATAAAATGTGAAGTCTGTTAAGAGGGAAAAATCTGTTTAAAGTATAACTTTA
TATCCGTGGCTCTGTAAAAATGCCACATCATTTATATTAAAAGCATGTATCTAACACAGCTTAT
CCCCAAGTAAATGAAAGTTGCTTCTGTGAATTTTCATTGTACTTTAACCCAAACAAAAGAAAGC
AACTTGCTTATGATGGGAAAACTGAAACATTACAGCCTGTTTCTTTAAGAAACCAGCTTAGCCA
GGGGTTTAGTGTGTTTAACCTAACCTGCTAGCGAGGAAAAGTTCTTTAAAATAATGGATATTAG
TCGTATCCAATCACAGTCATCAGCCTCACTAACAGGGAGGAGATTTGACTCTCTGGCCACTAGA
ATTGCGGGAGGTGGAGCTTGGTATTCAGGTTTGGTTGCTTTGGAGTACAGCTTCAAGTGAAGTT
AATCTGAGGTGAAGCAAACAGAAAATTGTGGAGGTTTTGTTGTGCAAGCAACAGCAGGAAAGAC
AACTCGACTTAGGGATCTGGGGACTGCTATGCAGAGTTACCAAGCCTACAGTACAGTAGGAACT
TTAACCTGTCCCTGTTCTTTCATCTGAGTGAGCAGCTTTCCTCCCAAGTGTTTTCTGTCAAGGT
GTGCAACAGAAGAACATGGCGCAAGAAACTAATCACAGCCAAGCACCTATGCTTTGCTCCACTG
GCTGCGGATTTTATGGAAACCCTCGTACAAATGGCATGTGCTCAGTATGCTATAAAGAACATCT
TCAAAGACAGAACAGTAGCAATGGTAGAATAAGCCCACCTGCAGCTTCTGTCAGCAGTCTGTCT
GAATCCTTACCAGTACAGTGCGCAGATGGCAGTGTCCCAGACGCTCAGTCGGCGCTAGATTCTA
CGTCTTCATCTATGCAGCCAGGCCCTGTATCAAATCAGTCACTTTTATCAGAATCTGTAGCACC
TTCCCAAGTGGACAGTACATCAGTGGACAAAGCAGTATCCGAGACAGAAGACCTGCAAGGACCC
AGAGCAGAGGGCCTTGTTCCTCTTGAATGTGATCCTCCATCTTCAGTATCAGATACGACACAGC
AGCCATCTGAAGAGCAAAGCAAGTCTCTTGAAAAACCAAAACAAAAAAAGAATCGCTGTTTCAT
GTGCAGGAAGAAAGTGGGACTTACTGGGTTTGAATGCCGGTGTGGAAATGTTTACTGTGGTGTG
CACCGTTACTCAGATGTTCACAATTGCTCTTACAATTACAAAGCTGATGCTGCTGAGAAAATCA
GAAAAGAAAATCCAGTAGTTGTTGGTGAAAAGATCCAGAAGATTTGAACTCCTGCTGGAATACA
AAATCCTTTGACTATCTGCAAACTAAACATTGACTTGAGGTTTTTTTTCCTAGTCCTTGGGAAT
GTAGAGCACCGTATCTTGCATAGACCGTTGAATCATGCATGTCATCAGAAGAATAGATTTTTGT
TTTTGTTTTGAAAATGACTCTGAACATTTATTTCCATTGCAGTTTCTGTGGCTGAAAAGAAGTA
TTATACTTTTAAGATCATTTTAATTTTAGTTGAGTGCAGAGGGCTTTTATAACAAATGTGGAGA
AATTCTGGAGGGCTGTGATTTTTTTCCAGTATTAAACATGCATGCGTTGATCTTGCAGTTTATT
TCTCATTGTGTATGTATATATAGCTTTTCTCTGCAGCACGATTCCCTTTTGATAAGGCCCTTCT
GGGTACAACTAGTTATCAGTAACTGAATGTATCTTAATCATTACGGCTGCTTCTGTTTGTTTGG
TTTTTCATTAACAAAGGTTATACATATGTTAGCATATAGTTTCTTTACATCCACTATTTATGTT
TGAATCATTTGTCACAGCAGAATATGTGCTGACGAGATTCTAAATTTGTGGCTTTCGGTTCCTT
TTTTTTTTAAACAAGGGAAAGAAAAGCTGAGTGCATTTCACTGCTGACTGCAAGTTTCTTTGCG
ATTACTGTTCATTGGTCTGTGTGTGCACAGTATGAAGAATGATCTGGTCATTGTGCGGTATTTA
TGTTTATTCACCAGTCTTTGATTAAATAAAAAGGAAAACCAGAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006229504 ⟹ XP_006229566

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,050,416 (-)	NCBI
mRatBN7.2	1	138,581,002 - 138,641,097 (-)	NCBI
Rnor_6.0	1	146,745,850 - 146,813,727 (-)	NCBI
Rnor_5.0	1	147,672,431 - 147,750,196 (-)	NCBI

Sequence:

show sequence

GTCTCTTAAGAGTCTAGTAAAAATACCATTATGCACAGTTTCTTGGATAGTTTAAAGGGAACAC
ATATTTCATCTACATTTGGTAATAATAATTTCTTTCCTTCCCAACTCTTGGAAGTCTAAAGCAG
CCTACTGCTTAGAAGACTACCTAGTGACTTTCTGGACCAGTCTGAGCTATGTAATAAGGACTCT
GTTCCAAACAAACAAACAAAAAAAAAAGTCAGACCAACACTGGAGAGGGGTTTATGTAAACCTC
CCTAAGCTTTCTACCTGGGAATCACGGCAGGGGGCTTATCTAGTATATTTGAAGCTCTGGGTTA
GATCTTCAACATTGTGAAATAAATTAACTTTGTTCCTGAAAGTGCCATTATACAAATTGCCTCC
TGTCTTTAGCTTTCCTTTTGCCCTGAATAGTCAGTTTTAACCAGAGATAGCAGTCTTTTGGGTC
ACTGAGAACTTTATAGTGTGCTGTGATACCTGAGACTGTGTCAGCAAATTTGACAGATAGCTTA
GAAGTGAGTCTTTAGCATTTAGGGTTTAGCTTAGAAGTGAGTGTTTAGCATTTAGGGTATGCTT
TTTAAATGCTGTTTCTTTTCTTTTCTTTTTTTTTTCCCCCCTTAAATTAATGGTCCTCTAACTA
GGTCTTAGAGAACACGCAGTTTGTTCTTAGCAGAATTTTGTAATGGATTTTTGAGTAGATCTTT
AAGATTTTTCAGATAAAATGTGAAGTCTGTTAAGAGGGAAAAATCTGTTTAAAGTATAACTTTA
TATCCGTGGCTCTGTAAAAATGCCACATCATTTATATTAAAAGCATGTATCTAACACAGCTTAT
CCCCAAGTAAATGAAAGTTGCTTCTGTGAATTTTCATTGTACTTTAACCCAAACAAAAGAAAGC
AACTTGCTTATGATGGGAAAACTGAAACATTACAGCCTGTTTCTTTAAGAAACCAGCTTAGCCA
GGGGTTTAGTGTGTTTAACCTAACCTGCTAGCGAGGAAAAGTTCTTTAAAATAATGGATATTAG
TCGTATCCAATCACAGTCATCAGCCTCACTAACAGGGAGGAGATTTGACTCTCTGGCCACTAGA
ATTGCGGGAGGTGGAGCTTGGTATTCAGGTTTGGTTGCTTTGGAGTACAGCTTCAAGTGAAGTT
AATCTGAGGTGAAGCAAACAGAAAATTGTGGAGGTTTTGTTGGAATGAATCTGAAGTCTGCTGC
AGTAAAACACTGAAGGCTTTAAAATGTTTTCTTGCGTAAAAGTCAAACTTTAAGTAGCTGCTTA
TGAGGATAGGGAAGGCAGGAAGCTAATGTCTGTCTCAAGACACAGGACAGCTGTTTGCTCATCA
ACCTCAACTGTGTGTGCAACAGAAGAACATGGCGCAAGAAACTAATCACAGCCAAGCACCTATG
CTTTGCTCCACTGGCTGCGGATTTTATGGAAACCCTCGTACAAATGGCATGTGCTCAGTATGCT
ATAAAGAACATCTTCAAAGACAGAACAGTAGCAATGGTAGAATAAGCCCACCTGCAGCTTCTGT
CAGCAGTCTGTCTGAATCCTTACCAGTACAGTGCGCAGATGGCAGTGTCCCAGACGCTCAGTCG
GCGCTAGATTCTACGTCTTCATCTATGCAGCCAGGCCCTGTATCAAATCAGTCACTTTTATCAG
AATCTGTAGCACCTTCCCAAGTGGACAGTACATCAGTGGACAAAGCAGTATCCGAGACAGAAGA
CCTGCAAGGACCCAGAGCAGAGGGCCTTGTTCCTCTTGAATGTGATCCTCCATCTTCAGTATCA
GATACGACACAGCAGCCATCTGAAGAGCAAAGCAAGTCTCTTGAAAAACCAAAACAAAAAAAGA
ATCGCTGTTTCATGTGCAGGAAGAAAGTGGGACTTACTGGGTTTGAATGCCGGTGTGGAAATGT
TTACTGTGGTGTGCACCGTTACTCAGATGTTCACAATTGCTCTTACAATTACAAAGCTGATGCT
GCTGAGAAAATCAGAAAAGAAAATCCAGTAGTTGTTGGTGAAAAGATCCAGAAGATTTGAACTC
CTGCTGGAATACAAAATCCTTTGACTATCTGCAAACTAAACATTGACTTGAGGTTTTTTTTCCT
AGTCCTTGGGAATGTAGAGCACCGTATCTTGCATAGACCGTTGAATCATGCATGTCATCAGAAG
AATAGATTTTTGTTTTTGTTTTGAAAATGACTCTGAACATTTATTTCCATTGCAGTTTCTGTGG
CTGAAAAGAAGTATTATACTTTTAAGATCATTTTAATTTTAGTTGAGTGCAGAGGGCTTTTATA
ACAAATGTGGAGAAATTCTGGAGGGCTGTGATTTTTTTCCAGTATTAAACATGCATGCGTTGAT
CTTGCAGTTTATTTCTCATTGTGTATGTATATATAGCTTTTCTCTGCAGCACGATTCCCTTTTG
ATAAGGCCCTTCTGGGTACAACTAGTTATCAGTAACTGAATGTATCTTAATCATTACGGCTGCT
TCTGTTTGTTTGGTTTTTCATTAACAAAGGTTATACATATGTTAGCATATAGTTTCTTTACATC
CACTATTTATGTTTGAATCATTTGTCACAGCAGAATATGTGCTGACGAGATTCTAAATTTGTGG
CTTTCGGTTCCTTTTTTTTTTAAACAAGGGAAAGAAAAGCTGAGTGCATTTCACTGCTGACTGC
AAGTTTCTTTGCGATTACTGTTCATTGGTCTGTGTGTGCACAGTATGAAGAATGATCTGGTCAT
TGTGCGGTATTTATGTTTATTCACCAGTCTTTGATTAAATAAAAAGGAAAACCAGAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006229505 ⟹ XP_006229567

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,061,141 (-)	NCBI
mRatBN7.2	1	138,581,002 - 138,652,043 (-)	NCBI
Rnor_6.0	1	146,745,850 - 146,823,758 (-)	NCBI
Rnor_5.0	1	147,672,431 - 147,750,196 (-)	NCBI

Sequence:

show sequence

GTGGGGGTTCGGCGGCCTCACCTGTCCTCACTCAGCGGCGGCGAGAGGCGGCGGCGGCAGCGCG
TCCGGCGGAGAGGGCCGCCGCCAGGTGTGCAACAGAAGAACATGGCGCAAGAAACTAATCACAG
CCAAGCACCTATGCTTTGCTCCACTGGCTGCGGATTTTATGGAAACCCTCGTACAAATGGCATG
TGCTCAGTATGCTATAAAGAACATCTTCAAAGACAGAACAGTAGCAATGGTAGAATAAGCCCAC
CTGCTTCTGTCAGCAGTCTGTCTGAATCCTTACCAGTACAGTGCGCAGATGGCAGTGTCCCAGA
CGCTCAGTCGGCGCTAGATTCTACGTCTTCATCTATGCAGCCAGGCCCTGTATCAAATCAGTCA
CTTTTATCAGAATCTGTAGCACCTTCCCAAGTGGACAGTACATCAGTGGACAAAGCAGTATCCG
AGACAGAAGACCTGCAAGGACCCAGAGCAGAGGGCCTTGTTCCTCTTGAATGTGATCCTCCATC
TTCAGTATCAGATACGACACAGCAGCCATCTGAAGAGCAAAGCAAGTCTCTTGAAAAACCAAAA
CAAAAAAAGAATCGCTGTTTCATGTGCAGGAAGAAAGTGGGACTTACTGGGTTTGAATGCCGGT
GTGGAAATGTTTACTGTGGTGTGCACCGTTACTCAGATGTTCACAATTGCTCTTACAATTACAA
AGCTGATGCTGCTGAGAAAATCAGAAAAGAAAATCCAGTAGTTGTTGGTGAAAAGATCCAGAAG
ATTTGAACTCCTGCTGGAATACAAAATCCTTTGACTATCTGCAAACTAAACATTGACTTGAGGT
TTTTTTTCCTAGTCCTTGGGAATGTAGAGCACCGTATCTTGCATAGACCGTTGAATCATGCATG
TCATCAGAAGAATAGATTTTTGTTTTTGTTTTGAAAATGACTCTGAACATTTATTTCCATTGCA
GTTTCTGTGGCTGAAAAGAAGTATTATACTTTTAAGATCATTTTAATTTTAGTTGAGTGCAGAG
GGCTTTTATAACAAATGTGGAGAAATTCTGGAGGGCTGTGATTTTTTTCCAGTATTAAACATGC
ATGCGTTGATCTTGCAGTTTATTTCTCATTGTGTATGTATATATAGCTTTTCTCTGCAGCACGA
TTCCCTTTTGATAAGGCCCTTCTGGGTACAACTAGTTATCAGTAACTGAATGTATCTTAATCAT
TACGGCTGCTTCTGTTTGTTTGGTTTTTCATTAACAAAGGTTATACATATGTTAGCATATAGTT
TCTTTACATCCACTATTTATGTTTGAATCATTTGTCACAGCAGAATATGTGCTGACGAGATTCT
AAATTTGTGGCTTTCGGTTCCTTTTTTTTTTAAACAAGGGAAAGAAAAGCTGAGTGCATTTCAC
TGCTGACTGCAAGTTTCTTTGCGATTACTGTTCATTGGTCTGTGTGTGCACAGTATGAAGAATG
ATCTGGTCATTGTGCGGTATTTATGTTTATTCACCAGTCTTTGATTAAATAAAAAGGAAAACCA
GAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006229506 ⟹ XP_006229568

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,050,416 (-)	NCBI
mRatBN7.2	1	138,581,002 - 138,641,131 (-)	NCBI
Rnor_6.0	1	146,745,850 - 146,813,727 (-)	NCBI
Rnor_5.0	1	147,672,431 - 147,750,196 (-)	NCBI

Sequence:

show sequence

GTCTCTTAAGAGTCTAGTAAAAATACCATTATGCACAGTTTCTTGGATAGTTTAAAGGGAACAC
ATATTTCATCTACATTTGGTAATAATAATTTCTTTCCTTCCCAACTCTTGGAAGTCTAAAGCAG
CCTACTGCTTAGAAGACTACCTAGTGACTTTCTGGACCAGTCTGAGCTATGTAATAAGGACTCT
GTTCCAAACAAACAAACAAAAAAAAAAGTCAGACCAACACTGGAGAGGGGTTTATGTAAACCTC
CCTAAGCTTTCTACCTGGGAATCACGGCAGGGGGCTTATCTAGTATATTTGAAGCTCTGGGTTA
GATCTTCAACATTGTGAAATAAATTAACTTTGTTCCTGAAAGTGCCATTATACAAATTGCCTCC
TGTCTTTAGCTTTCCTTTTGCCCTGAATAGTCAGTTTTAACCAGAGATAGCAGTCTTTTGGGTC
ACTGAGAACTTTATAGTGTGCTGTGATACCTGAGACTGTGTCAGCAAATTTGACAGATAGCTTA
GAAGTGAGTCTTTAGCATTTAGGGTTTAGCTTAGAAGTGAGTGTTTAGCATTTAGGGTATGCTT
TTTAAATGCTGTTTCTTTTCTTTTCTTTTTTTTTTCCCCCCTTAAATTAATGGTCCTCTAACTA
GGTCTTAGAGAACACGCAGTTTGTTCTTAGCAGAATTTTGTAATGGATTTTTGAGTAGATCTTT
AAGATTTTTCAGATAAAATGTGAAGTCTGTTAAGAGGGAAAAATCTGTTTAAAGTATAACTTTA
TATCCGTGGCTCTGTAAAAATGCCACATCATTTATATTAAAAGCATGTATCTAACACAGCTTAT
CCCCAAGTAAATGAAAGTTGCTTCTGTGAATTTTCATTGTACTTTAACCCAAACAAAAGAAAGC
AACTTGCTTATGATGGGAAAACTGAAACATTACAGCCTGTTTCTTTAAGAAACCAGCTTAGCCA
GGGGTTTAGTGTGTTTAACCTAACCTGCTAGCGAGGAAAAGTTCTTTAAAATAATGGATATTAG
TCGTATCCAATCACAGTCATCAGCCTCACTAACAGGGAGGAGATTTGACTCTCTGGCCACTAGA
ATTGCGGGAGGTGGAGCTTGGTATTCAGGTTTGGTTGCTTTGGAGTACAGCTTCAAGTGAAGTT
AATCTGAGGTGAAGCAAACAGAAAATTGTGGAGGTTTTGTTGGTGTGCAACAGAAGAACATGGC
GCAAGAAACTAATCACAGCCAAGCACCTATGCTTTGCTCCACTGGCTGCGGATTTTATGGAAAC
CCTCGTACAAATGGCATGTGCTCAGTATGCTATAAAGAACATCTTCAAAGACAGAACAGTAGCA
ATGGTAGAATAAGCCCACCTGCTTCTGTCAGCAGTCTGTCTGAATCCTTACCAGTACAGTGCGC
AGATGGCAGTGTCCCAGACGCTCAGTCGGCGCTAGATTCTACGTCTTCATCTATGCAGCCAGGC
CCTGTATCAAATCAGTCACTTTTATCAGAATCTGTAGCACCTTCCCAAGTGGACAGTACATCAG
TGGACAAAGCAGTATCCGAGACAGAAGACCTGCAAGGACCCAGAGCAGAGGGCCTTGTTCCTCT
TGAATGTGATCCTCCATCTTCAGTATCAGATACGACACAGCAGCCATCTGAAGAGCAAAGCAAG
TCTCTTGAAAAACCAAAACAAAAAAAGAATCGCTGTTTCATGTGCAGGAAGAAAGTGGGACTTA
CTGGGTTTGAATGCCGGTGTGGAAATGTTTACTGTGGTGTGCACCGTTACTCAGATGTTCACAA
TTGCTCTTACAATTACAAAGCTGATGCTGCTGAGAAAATCAGAAAAGAAAATCCAGTAGTTGTT
GGTGAAAAGATCCAGAAGATTTGAACTCCTGCTGGAATACAAAATCCTTTGACTATCTGCAAAC
TAAACATTGACTTGAGGTTTTTTTTCCTAGTCCTTGGGAATGTAGAGCACCGTATCTTGCATAG
ACCGTTGAATCATGCATGTCATCAGAAGAATAGATTTTTGTTTTTGTTTTGAAAATGACTCTGA
ACATTTATTTCCATTGCAGTTTCTGTGGCTGAAAAGAAGTATTATACTTTTAAGATCATTTTAA
TTTTAGTTGAGTGCAGAGGGCTTTTATAACAAATGTGGAGAAATTCTGGAGGGCTGTGATTTTT
TTCCAGTATTAAACATGCATGCGTTGATCTTGCAGTTTATTTCTCATTGTGTATGTATATATAG
CTTTTCTCTGCAGCACGATTCCCTTTTGATAAGGCCCTTCTGGGTACAACTAGTTATCAGTAAC
TGAATGTATCTTAATCATTACGGCTGCTTCTGTTTGTTTGGTTTTTCATTAACAAAGGTTATAC
ATATGTTAGCATATAGTTTCTTTACATCCACTATTTATGTTTGAATCATTTGTCACAGCAGAAT
ATGTGCTGACGAGATTCTAAATTTGTGGCTTTCGGTTCCTTTTTTTTTTAAACAAGGGAAAGAA
AAGCTGAGTGCATTTCACTGCTGACTGCAAGTTTCTTTGCGATTACTGTTCATTGGTCTGTGTG
TGCACAGTATGAAGAATGATCTGGTCATTGTGCGGTATTTATGTTTATTCACCAGTCTTTGATT
AAATAAAAAGGAAAACCAGAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006229507 ⟹ XP_006229569

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,061,221 (-)	NCBI
mRatBN7.2	1	138,581,002 - 138,652,052 (-)	NCBI
Rnor_6.0	1	146,745,850 - 146,823,758 (-)	NCBI
Rnor_5.0	1	147,672,431 - 147,750,196 (-)	NCBI

Sequence:

show sequence

GTGGGGGTTCGGCGGCCTCACCTGTCCTCACTCAGCGGCGGCGAGAGGCGGCGGCGGCAGCGCG
TCCGGCGGAGAGGGCCGCCGCCAGGTGTGCAACAGAAGAACATGGCGCAAGAAACTAATCACAG
CCAAGCACCTATGCTTTGCTCCACTGGCTGCGGATTTTATGGAAACCCTCGTACAAATGGCATG
TGCTCAGTATGCTATAAAGAACATCTTCAAAGACAGAACAGTAGCAATGGTAGAATAAGCCCAC
CTGCAGCTTCTGTCAGCAGTCTGTCTGAATCCTTACCAGTACAGTGCGCAGATGGCAGTGTCCC
AGACGCTCAGTCGGCGCTAGATTCTACGTCTTCATCTATGCAGCCAGGCCCTGTATCAAATCAG
TCACTTTTATCAGAATCTGTAGCACCTTCCCAAGTGGACAGTACATCAGTGGACAAAGCAGTAT
CCGAGACAGAAGACCTGCAAGCTTCAGTATCAGATACGACACAGCAGCCATCTGAAGAGCAAAG
CAAGTCTCTTGAAAAACCAAAACAAAAAAAGAATCGCTGTTTCATGTGCAGGAAGAAAGTGGGA
CTTACTGGGTTTGAATGCCGGTGTGGAAATGTTTACTGTGGTGTGCACCGTTACTCAGATGTTC
ACAATTGCTCTTACAATTACAAAGCTGATGCTGCTGAGAAAATCAGAAAAGAAAATCCAGTAGT
TGTTGGTGAAAAGATCCAGAAGATTTGAACTCCTGCTGGAATACAAAATCCTTTGACTATCTGC
AAACTAAACATTGACTTGAGGTTTTTTTTCCTAGTCCTTGGGAATGTAGAGCACCGTATCTTGC
ATAGACCGTTGAATCATGCATGTCATCAGAAGAATAGATTTTTGTTTTTGTTTTGAAAATGACT
CTGAACATTTATTTCCATTGCAGTTTCTGTGGCTGAAAAGAAGTATTATACTTTTAAGATCATT
TTAATTTTAGTTGAGTGCAGAGGGCTTTTATAACAAATGTGGAGAAATTCTGGAGGGCTGTGAT
TTTTTTCCAGTATTAAACATGCATGCGTTGATCTTGCAGTTTATTTCTCATTGTGTATGTATAT
ATAGCTTTTCTCTGCAGCACGATTCCCTTTTGATAAGGCCCTTCTGGGTACAACTAGTTATCAG
TAACTGAATGTATCTTAATCATTACGGCTGCTTCTGTTTGTTTGGTTTTTCATTAACAAAGGTT
ATACATATGTTAGCATATAGTTTCTTTACATCCACTATTTATGTTTGAATCATTTGTCACAGCA
GAATATGTGCTGACGAGATTCTAAATTTGTGGCTTTCGGTTCCTTTTTTTTTTAAACAAGGGAA
AGAAAAGCTGAGTGCATTTCACTGCTGACTGCAAGTTTCTTTGCGATTACTGTTCATTGGTCTG
TGTGTGCACAGTATGAAGAATGATCTGGTCATTGTGCGGTATTTATGTTTATTCACCAGTCTTT
GATTAAATAAAAAGGAAAACCAGAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006229508 ⟹ XP_006229570

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,050,416 (-)	NCBI
mRatBN7.2	1	138,581,002 - 138,641,117 (-)	NCBI
Rnor_6.0	1	146,745,850 - 146,813,727 (-)	NCBI
Rnor_5.0	1	147,672,431 - 147,750,196 (-)	NCBI

Sequence:

show sequence

GTCTCTTAAGAGTCTAGTAAAAATACCATTATGCACAGTTTCTTGGATAGTTTAAAGGGAACAC
ATATTTCATCTACATTTGGTAATAATAATTTCTTTCCTTCCCAACTCTTGGAAGTCTAAAGCAG
CCTACTGCTTAGAAGACTACCTAGTGACTTTCTGGACCAGTCTGAGCTATGTAATAAGGACTCT
GTTCCAAACAAACAAACAAAAAAAAAAGTCAGACCAACACTGGAGAGGGGTTTATGTAAACCTC
CCTAAGCTTTCTACCTGGGAATCACGGCAGGGGGCTTATCTAGTATATTTGAAGCTCTGGGTTA
GATCTTCAACATTGTGAAATAAATTAACTTTGTTCCTGAAAGTGCCATTATACAAATTGCCTCC
TGTCTTTAGCTTTCCTTTTGCCCTGAATAGTCAGTTTTAACCAGAGATAGCAGTCTTTTGGGTC
ACTGAGAACTTTATAGTGTGCTGTGATACCTGAGACTGTGTCAGCAAATTTGACAGATAGCTTA
GAAGTGAGTCTTTAGCATTTAGGGTTTAGCTTAGAAGTGAGTGTTTAGCATTTAGGGTATGCTT
TTTAAATGCTGTTTCTTTTCTTTTCTTTTTTTTTTCCCCCCTTAAATTAATGGTCCTCTAACTA
GGTCTTAGAGAACACGCAGTTTGTTCTTAGCAGAATTTTGTAATGGATTTTTGAGTAGATCTTT
AAGATTTTTCAGATAAAATGTGAAGTCTGTTAAGAGGGAAAAATCTGTTTAAAGTATAACTTTA
TATCCGTGGCTCTGTAAAAATGCCACATCATTTATATTAAAAGCATGTATCTAACACAGCTTAT
CCCCAAGTAAATGAAAGTTGCTTCTGTGAATTTTCATTGTACTTTAACCCAAACAAAAGAAAGC
AACTTGCTTATGATGGGAAAACTGAAACATTACAGCCTGTTTCTTTAAGAAACCAGCTTAGCCA
GGGGTTTAGTGTGTTTAACCTAACCTGCTAGCGAGGAAAAGTTCTTTAAAATAATGGATATTAG
TCGTATCCAATCACAGTCATCAGCCTCACTAACAGGGAGGAGATTTGACTCTCTGGCCACTAGA
ATTGCGGGAGGTGGAGCTTGGTATTCAGGTTTGGTTGCTTTGGAGTACAGCTTCAAGTGAAGTT
AATCTGAGGTGAAGCAAACAGAAAATTGTGGAGGTTTTGTTGGTGTGCAACAGAAGAACATGGC
GCAAGAAACTAATCACAGCCAAGCACCTATGCTTTGCTCCACTGGCTGCGGATTTTATGGAAAC
CCTCGTACAAATGGCATGTGCTCAGTATGCTATAAAGAACATCTTCAAAGACAGAACAGTAGCA
ATGGTAGAATAAGCCCACCTGCAGCTTCTGTCAGCAGTCTGTCTGAATCCTTACCAGTACAGTG
CGCAGATGGCAGTGTCCCAGACGCTCAGTCGGCGCTAGATTCTACGTCTTCATCTATGCAGCCA
GGCCCTGTATCAAATCAGTCACTTTTATCAGAATCTGTAGCACCTTCCCAAGTGGACAGTACAT
CAGTGGACAAAGCAGTATCCGAGACAGAAGACCTGCAAGCTTCAGTATCAGATACGACACAGCA
GCCATCTGAAGAGCAAAGCAAGTCTCTTGAAAAACCAAAACAAAAAAAGAATCGCTGTTTCATG
TGCAGGAAGAAAGTGGGACTTACTGGGTTTGAATGCCGGTGTGGAAATGTTTACTGTGGTGTGC
ACCGTTACTCAGATGTTCACAATTGCTCTTACAATTACAAAGCTGATGCTGCTGAGAAAATCAG
AAAAGAAAATCCAGTAGTTGTTGGTGAAAAGATCCAGAAGATTTGAACTCCTGCTGGAATACAA
AATCCTTTGACTATCTGCAAACTAAACATTGACTTGAGGTTTTTTTTCCTAGTCCTTGGGAATG
TAGAGCACCGTATCTTGCATAGACCGTTGAATCATGCATGTCATCAGAAGAATAGATTTTTGTT
TTTGTTTTGAAAATGACTCTGAACATTTATTTCCATTGCAGTTTCTGTGGCTGAAAAGAAGTAT
TATACTTTTAAGATCATTTTAATTTTAGTTGAGTGCAGAGGGCTTTTATAACAAATGTGGAGAA
ATTCTGGAGGGCTGTGATTTTTTTCCAGTATTAAACATGCATGCGTTGATCTTGCAGTTTATTT
CTCATTGTGTATGTATATATAGCTTTTCTCTGCAGCACGATTCCCTTTTGATAAGGCCCTTCTG
GGTACAACTAGTTATCAGTAACTGAATGTATCTTAATCATTACGGCTGCTTCTGTTTGTTTGGT
TTTTCATTAACAAAGGTTATACATATGTTAGCATATAGTTTCTTTACATCCACTATTTATGTTT
GAATCATTTGTCACAGCAGAATATGTGCTGACGAGATTCTAAATTTGTGGCTTTCGGTTCCTTT
TTTTTTTAAACAAGGGAAAGAAAAGCTGAGTGCATTTCACTGCTGACTGCAAGTTTCTTTGCGA
TTACTGTTCATTGGTCTGTGTGTGCACAGTATGAAGAATGATCTGGTCATTGTGCGGTATTTAT
GTTTATTCACCAGTCTTTGATTAAATAAAAAGGAAAACCAGAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_017588943 ⟹ XP_017444432

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,061,113 (-)	NCBI
mRatBN7.2	1	138,581,002 - 138,651,987 (-)	NCBI
Rnor_6.0	1	146,745,850 - 146,823,758 (-)	NCBI

Sequence:

show sequence

GTGGGGGTTCGGCGGCCTCACCTGTCCTCACTCAGCGGCGGCGAGAGGCGGCGGCGGCAGCGCG
TCCGGCGGAGAGGGCCGCCGCCAGGAATGAATCTGAAGTCTGCTGCAGTAAAACACTGAAGGCT
TTAAAATGTTTTCTTGCGTAAAAGTCAAACTTTAAGTAGCTGCTTATGAGGATAGGGAAGGCAG
GAAGCTAATGTCTGTCTCAAGACACAGGACAGCTGTTTGCTCATCAACCTCAACTGTGTGTGCA
ACAGAAGAACATGGCGCAAGAAACTAATCACAGCCAAGCACCTATGCTTTGCTCCACTGGCTGC
GGATTTTATGGAAACCCTCGTACAAATGGCATGTGCTCAGTATGCTATAAAGAACATCTTCAAA
GACAGAACAGTAGCAATGGTAGAATAAGCCCACCTGCAGCTTCTGTCAGCAGTCTGTCTGAATC
CTTACCAGTACAGTGCGCAGATGGCAGTGTCCCAGACGCTCAGTCGGCGCTAGATTCTACGTCT
TCATCTATGCAGCCAGGCCCTGTATCAAATCAGTCACTTTTATCAGAATCTGTAGCACCTTCCC
AAGTGGACAGTACATCAGTGGACAAAGCAGTATCCGAGACAGAAGACCTGCAAGGACCCAGAGC
AGAGGGCCTTGTTCCTCTTGAATGTGATCCTCCATCTTCAGTATCAGATACGACACAGCAGCCA
TCTGAAGAGCAAAGCAAGTCTCTTGAAAAACCAAAACAAAAAAAGAATCGCTGTTTCATGTGCA
GGAAGAAAGTGGGACTTACTGGGTTTGAATGCCGGTGTGGAAATGTTTACTGTGGTGTGCACCG
TTACTCAGATGTTCACAATTGCTCTTACAATTACAAAGCTGATGCTGCTGAGAAAATCAGAAAA
GAAAATCCAGTAGTTGTTGGTGAAAAGATCCAGAAGATTTGAACTCCTGCTGGAATACAAAATC
CTTTGACTATCTGCAAACTAAACATTGACTTGAGGTTTTTTTTCCTAGTCCTTGGGAATGTAGA
GCACCGTATCTTGCATAGACCGTTGAATCATGCATGTCATCAGAAGAATAGATTTTTGTTTTTG
TTTTGAAAATGACTCTGAACATTTATTTCCATTGCAGTTTCTGTGGCTGAAAAGAAGTATTATA
CTTTTAAGATCATTTTAATTTTAGTTGAGTGCAGAGGGCTTTTATAACAAATGTGGAGAAATTC
TGGAGGGCTGTGATTTTTTTCCAGTATTAAACATGCATGCGTTGATCTTGCAGTTTATTTCTCA
TTGTGTATGTATATATAGCTTTTCTCTGCAGCACGATTCCCTTTTGATAAGGCCCTTCTGGGTA
CAACTAGTTATCAGTAACTGAATGTATCTTAATCATTACGGCTGCTTCTGTTTGTTTGGTTTTT
CATTAACAAAGGTTATACATATGTTAGCATATAGTTTCTTTACATCCACTATTTATGTTTGAAT
CATTTGTCACAGCAGAATATGTGCTGACGAGATTCTAAATTTGTGGCTTTCGGTTCCTTTTTTT
TTTAAACAAGGGAAAGAAAAGCTGAGTGCATTTCACTGCTGACTGCAAGTTTCTTTGCGATTAC
TGTTCATTGGTCTGTGTGTGCACAGTATGAAGAATGATCTGGTCATTGTGCGGTATTTATGTTT
ATTCACCAGTCTTTGATTAAATAAAAAGGAAAACCAGAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039105745 ⟹ XP_038961673

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,050,416 (-)	NCBI
mRatBN7.2	1	138,581,002 - 138,641,097 (-)	NCBI

RefSeq Acc Id:

XM_039105750 ⟹ XP_038961678

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,061,212 (-)	NCBI
mRatBN7.2	1	138,581,002 - 138,651,984 (-)	NCBI

RefSeq Acc Id:

XM_063284809 ⟹ XP_063140879

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,014,053 (-)	NCBI

RefSeq Acc Id:

XM_063284824 ⟹ XP_063140894

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,061,113 (-)	NCBI

RefSeq Acc Id:

XM_063284825 ⟹ XP_063140895

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,061,111 (-)	NCBI

RefSeq Acc Id:

XM_063284837 ⟹ XP_063140907

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,061,113 (-)	NCBI

RefSeq Acc Id:

XM_063284839 ⟹ XP_063140909

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,061,113 (-)	NCBI

RefSeq Acc Id:

XM_063284840 ⟹ XP_063140910

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,061,113 (-)	NCBI

RefSeq Acc Id:

XM_063284841 ⟹ XP_063140911

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,061,111 (-)	NCBI

RefSeq Acc Id:

XM_063284842 ⟹ XP_063140912

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,050,416 (-)	NCBI

RefSeq Acc Id:

XM_063284851 ⟹ XP_063140921

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,014,053 (-)	NCBI

RefSeq Acc Id:

XM_063284852 ⟹ XP_063140922

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,061,141 (-)	NCBI

RefSeq Acc Id:

XM_063284854 ⟹ XP_063140924

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,061,113 (-)	NCBI

RefSeq Acc Id:

XM_063284856 ⟹ XP_063140926

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	147,990,099 - 148,061,113 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001007631	(Get FASTA)	NCBI Sequence Viewer
	XP_006229561	(Get FASTA)	NCBI Sequence Viewer
	XP_006229562	(Get FASTA)	NCBI Sequence Viewer
	XP_006229564	(Get FASTA)	NCBI Sequence Viewer
	XP_006229566	(Get FASTA)	NCBI Sequence Viewer
	XP_006229567	(Get FASTA)	NCBI Sequence Viewer
	XP_006229568	(Get FASTA)	NCBI Sequence Viewer
	XP_006229569	(Get FASTA)	NCBI Sequence Viewer
	XP_006229570	(Get FASTA)	NCBI Sequence Viewer
	XP_017444432	(Get FASTA)	NCBI Sequence Viewer
	XP_038961673	(Get FASTA)	NCBI Sequence Viewer
	XP_038961678	(Get FASTA)	NCBI Sequence Viewer
	XP_063140879	(Get FASTA)	NCBI Sequence Viewer
	XP_063140894	(Get FASTA)	NCBI Sequence Viewer
	XP_063140895	(Get FASTA)	NCBI Sequence Viewer
	XP_063140907	(Get FASTA)	NCBI Sequence Viewer
	XP_063140909	(Get FASTA)	NCBI Sequence Viewer
	XP_063140910	(Get FASTA)	NCBI Sequence Viewer
	XP_063140911	(Get FASTA)	NCBI Sequence Viewer
	XP_063140912	(Get FASTA)	NCBI Sequence Viewer
	XP_063140921	(Get FASTA)	NCBI Sequence Viewer
	XP_063140922	(Get FASTA)	NCBI Sequence Viewer
	XP_063140924	(Get FASTA)	NCBI Sequence Viewer
	XP_063140926	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH76394	(Get FASTA)	NCBI Sequence Viewer
	EDM08768	(Get FASTA)	NCBI Sequence Viewer
	EDM08769	(Get FASTA)	NCBI Sequence Viewer
	EDM08770	(Get FASTA)	NCBI Sequence Viewer
	EDM08771	(Get FASTA)	NCBI Sequence Viewer
	EDM08772	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000018098.4
	ENSRNOP00000088600
	ENSRNOP00000095451
GenBank Protein	Q6DGF4	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001007631 ⟸ NM_001007630

- UniProtKB:

Q6DGF4 (UniProtKB/Swiss-Prot), A6JCP3 (UniProtKB/TrEMBL), A0A8I5YCN4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAQETNHSQAPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAASVSSLSESLPV
QCADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGL
VPLECDPPSSVSDTTQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSD
VHNCSYNYKADAAEKIRKENPVVVGEKIQKI

hide sequence

RefSeq Acc Id:	XP_006229561 ⟸ XM_006229499
- Peptide Label:	isoform X1
- UniProtKB:	Q6DGF4 (UniProtKB/Swiss-Prot), A6JCP3 (UniProtKB/TrEMBL), A0A8I5YCN4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQETNHSQAPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAASVSSLSESLPV QCADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGL VPLECDPPSSVSDTTQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSD VHNCSYNYKADAAEKIRKENPVVVGEKIQKI hide sequence

RefSeq Acc Id:	XP_006229567 ⟸ XM_006229505
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AJP8 (UniProtKB/TrEMBL), A0A8I5YCN4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQETNHSQAPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPASVSSLSESLPVQ CADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGLV PLECDPPSSVSDTTQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDV HNCSYNYKADAAEKIRKENPVVVGEKIQKI hide sequence

RefSeq Acc Id:	XP_006229569 ⟸ XM_006229507
- Peptide Label:	isoform X3
- UniProtKB:	A6JCP2 (UniProtKB/TrEMBL), A0A8I6A8E7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQETNHSQAPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAASVSSLSESLPV QCADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQASVSDTT QQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEK IRKENPVVVGEKIQKI hide sequence

RefSeq Acc Id:	XP_006229568 ⟸ XM_006229506
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AJP8 (UniProtKB/TrEMBL), A0A8I5YCN4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQETNHSQAPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPASVSSLSESLPVQ CADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGLV PLECDPPSSVSDTTQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDV HNCSYNYKADAAEKIRKENPVVVGEKIQKI hide sequence

RefSeq Acc Id:	XP_006229570 ⟸ XM_006229508
- Peptide Label:	isoform X3
- UniProtKB:	A6JCP2 (UniProtKB/TrEMBL), A0A8I6A8E7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQETNHSQAPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAASVSSLSESLPV QCADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQASVSDTT QQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEK IRKENPVVVGEKIQKI hide sequence

RefSeq Acc Id:	XP_006229562 ⟸ XM_006229500
- Peptide Label:	isoform X1
- UniProtKB:	Q6DGF4 (UniProtKB/Swiss-Prot), A6JCP3 (UniProtKB/TrEMBL), A0A8I5YCN4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQETNHSQAPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAASVSSLSESLPV QCADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGL VPLECDPPSSVSDTTQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSD VHNCSYNYKADAAEKIRKENPVVVGEKIQKI hide sequence

RefSeq Acc Id:	XP_006229566 ⟸ XM_006229504
- Peptide Label:	isoform X1
- UniProtKB:	Q6DGF4 (UniProtKB/Swiss-Prot), A6JCP3 (UniProtKB/TrEMBL), A0A8I5YCN4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQETNHSQAPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAASVSSLSESLPV QCADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGL VPLECDPPSSVSDTTQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSD VHNCSYNYKADAAEKIRKENPVVVGEKIQKI hide sequence

RefSeq Acc Id:	XP_006229564 ⟸ XM_006229502
- Peptide Label:	isoform X1
- UniProtKB:	Q6DGF4 (UniProtKB/Swiss-Prot), A6JCP3 (UniProtKB/TrEMBL), A0A8I5YCN4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQETNHSQAPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAASVSSLSESLPV QCADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGL VPLECDPPSSVSDTTQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSD VHNCSYNYKADAAEKIRKENPVVVGEKIQKI hide sequence

RefSeq Acc Id:	XP_017444432 ⟸ XM_017588943
- Peptide Label:	isoform X1
- UniProtKB:	Q6DGF4 (UniProtKB/Swiss-Prot), A6JCP3 (UniProtKB/TrEMBL), A0A8I5YCN4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQETNHSQAPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAASVSSLSESLPV QCADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGL VPLECDPPSSVSDTTQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSD VHNCSYNYKADAAEKIRKENPVVVGEKIQKI hide sequence

Ensembl Acc Id:

ENSRNOP00000018098 ⟸ ENSRNOT00000018098

RefSeq Acc Id:	XP_038961678 ⟸ XM_039105750
- Peptide Label:	isoform X1
- UniProtKB:	Q6DGF4 (UniProtKB/Swiss-Prot), A6JCP3 (UniProtKB/TrEMBL), A0A8I5YCN4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038961673 ⟸ XM_039105745
- Peptide Label:	isoform X1
- UniProtKB:	Q6DGF4 (UniProtKB/Swiss-Prot), A6JCP3 (UniProtKB/TrEMBL), A0A8I5YCN4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000078169 ⟸ ENSRNOT00000119528

Ensembl Acc Id:

ENSRNOP00000088600 ⟸ ENSRNOT00000099671

Ensembl Acc Id:

ENSRNOP00000095451 ⟸ ENSRNOT00000100459

RefSeq Acc Id:	XP_063140922 ⟸ XM_063284852
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6A8E7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140926 ⟸ XM_063284856
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6A8E7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140894 ⟸ XM_063284824
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5YCN4 (UniProtKB/TrEMBL), A0A8I6AJP8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140910 ⟸ XM_063284840
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6A8E7 (UniProtKB/TrEMBL), A6JCP2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140924 ⟸ XM_063284854
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6A8E7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140907 ⟸ XM_063284837
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5YCN4 (UniProtKB/TrEMBL), A0A8I6AJP8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140909 ⟸ XM_063284839
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6A8E7 (UniProtKB/TrEMBL), A6JCP2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140895 ⟸ XM_063284825
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5YCN4 (UniProtKB/TrEMBL), A0A8I6AJP8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140911 ⟸ XM_063284841
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6A8E7 (UniProtKB/TrEMBL), A6JCP2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140912 ⟸ XM_063284842
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6A8E7 (UniProtKB/TrEMBL), A6JCP2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140921 ⟸ XM_063284851
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6A8E7 (UniProtKB/TrEMBL), A6JCP2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140879 ⟸ XM_063284809
- Peptide Label:	isoform X1
- UniProtKB:	Q6DGF4 (UniProtKB/Swiss-Prot), A0A8I5YCN4 (UniProtKB/TrEMBL), A6JCP3 (UniProtKB/TrEMBL)

Protein Domains

A20-type AN1-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6DGF4-F1-model_v2	AlphaFold	Q6DGF4	1-223	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13690171

Promoter ID:

EPDNEW_R695

Type:

multiple initiation site

Name:

Zfand6_1

Description:

zinc finger AN1-type containing 6

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	1	146,823,729 - 146,823,789	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1359317	AgrOrtholog
BioCyc Gene	G2FUF-58648	BioCyc
Ensembl Genes	ENSRNOG00000013506	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000018098.6	UniProtKB/Swiss-Prot
	ENSRNOT00000099671	ENTREZGENE
	ENSRNOT00000100459	ENTREZGENE
Gene3D-CATH	1.20.5.4770	UniProtKB/Swiss-Prot
	4.10.1110.10	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7107784	IMAGE-MGC_LOAD
InterPro	AN1-like_Znf	UniProtKB/Swiss-Prot
	AN1_A20_ZnFinger	UniProtKB/Swiss-Prot
	Znf_A20	UniProtKB/Swiss-Prot
	Znf_AN1	UniProtKB/Swiss-Prot
KEGG Report	rno:293067	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:94805	IMAGE-MGC_LOAD
NCBI Gene	293067	ENTREZGENE
PANTHER	AN1-TYPE ZINC FINGER PROTEIN	UniProtKB/Swiss-Prot
	AN1-TYPE ZINC FINGER PROTEIN 6	UniProtKB/Swiss-Prot
Pfam	zf-A20	UniProtKB/Swiss-Prot
	zf-AN1	UniProtKB/Swiss-Prot
PhenoGen	Zfand6	PhenoGen
PROSITE	ZF_A20	UniProtKB/Swiss-Prot
	ZF_AN1	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000013506	RatGTEx
SMART	ZnF_A20	UniProtKB/Swiss-Prot
	ZnF_AN1	UniProtKB/Swiss-Prot
Superfamily-SCOP	Glucocorticoid receptor-like (DNA-binding domain)	UniProtKB/Swiss-Prot
	SSF118310	UniProtKB/Swiss-Prot
UniProt	A0A8I5YCN4	ENTREZGENE
	A0A8I6A8E7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AJP8	ENTREZGENE, UniProtKB/TrEMBL
	A6JCP2	ENTREZGENE, UniProtKB/TrEMBL
	A6JCP3	ENTREZGENE, UniProtKB/TrEMBL
	Q6DGF4	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-02-17	Zfand6	zinc finger AN1-type containing 6	Zfand6	zinc finger, AN1-type domain 6	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-04	Zfand6	zinc finger, AN1-type domain 6	Za20d3	zinc finger, A20 domain containing 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-30	Za20d3	zinc finger, A20 domain containing 3	zgc:101121	protein associated with PRK1	Symbol and Name updated	1299863	APPROVED
2005-07-29	zgc:101121	protein associated with PRK1			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD