Or7d11 (olfactory receptor family 7 subfamily D member 11) - Rat Genome Database

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Pathways
Gene: Or7d11 (olfactory receptor family 7 subfamily D member 11) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Or7d11
Name: olfactory receptor family 7 subfamily D member 11
RGD ID: 1334163
Description: Predicted to enable olfactory receptor activity. Predicted to be involved in signal transduction. Predicted to be active in plasma membrane; INTERACTS WITH cadmium atom; cadmium dichloride; copper atom.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: ENSRNOG00000068168; GUST27; olfactory receptor 1172; olfactory receptor gene Olr1172; olfactory receptor Olr1172; Olr1172
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8826,442,686 - 26,443,681 (-)NCBIGRCr8GRCr8GRCr8
mRatBN7.2818,166,439 - 18,167,434 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl818,165,410 - 18,169,489 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl818,165,410 - 18,169,489 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx822,190,081 - 22,191,076 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0820,487,917 - 20,488,912 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0818,396,229 - 18,397,224 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0820,442,073 - 20,443,068 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl820,442,073 - 20,443,068 (-)Ensemblrn6Rnor6.0
Rnor_5.0820,515,564 - 20,516,559 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4818,628,573 - 18,629,568 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera819,579,022 - 19,580,017 (-)NCBICelera
RGSC_v3.1818,628,572 - 18,629,568 (-)NCBI
Cytogenetic Map8q13NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Primary structure and cell-type specific expression of a gustatory G protein-coupled receptor related to olfactory receptors. Abe K, etal., J Biol Chem 1993 Jun 5;268(16):12033-9.
2. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Gibbs RA, etal., Nature 2004 Apr 1;428(6982):493-521.
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:21873635  


Genomics

Variants

.
Variants in Or7d11
7 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357398Slep3Serum leptin concentration QTL 33.43blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)81799410550763951Rat
2317030Wbc5White blood cell count QTL 53.210.005leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)81699464261994642Rat
12880044Am9Aortic mass QTL 90.007aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)81038254055382540Rat
2317032Ginf2Gastrointestinal inflammation QTL 23.210.005liver integrity trait (VT:0010547)liver granuloma severity score (CMO:0002157)81296416557964165Rat
2301416Bp315Blood pressure QTL 3150.008arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)81595227960952279Rat
2317036Livw3Liver weight QTL 32.430.01liver mass (VT:0003402)liver weight to body weight ratio (CMO:0000633)81296416557964165Rat
1598824Memor4Memory QTL 42.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)81799386262252873Rat
12880023Bw184Body weight QTL 1840.001body mass (VT:0001259)body weight (CMO:0000012)81038254055382540Rat
9590084Insglur5Insulin/glucose ratio QTL 518.540.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)8132882639Rat
12880028Cm103Cardiac mass QTL 1030.02heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)81038254055382540Rat
2317051Aia18Adjuvant induced arthritis QTL 182.42joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)81699464261994642Rat
2317048Ginf1Gastrointestinal inflammation QTL 13.520.005cecum mucosa thickness (VT:0010234)enterocolitis severity score (CMO:0002138)81296416557964165Rat
2302367Slep5Serum leptin concentration QTL 53.43blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)81799410550763951Rat
12880025Cm102Cardiac mass QTL 1020.044heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)81038254055382540Rat


Expression

RNA-SEQ Expression

endocrine system
endoderm
exocrine system
hepatobiliary system
mesenchyme
renal system
2 2 2 2 5 3

Sequence


Ensembl Acc Id: ENSRNOT00000086296   ⟹   ENSRNOP00000075696
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl818,165,410 - 18,169,489 (-)Ensembl
Rnor_6.0 Ensembl820,442,073 - 20,443,068 (-)Ensembl
RefSeq Acc Id: NM_001000983   ⟹   NP_001000983
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8826,442,686 - 26,443,681 (-)NCBI
mRatBN7.2818,166,439 - 18,167,434 (-)NCBI
Rnor_6.0820,442,073 - 20,443,068 (-)NCBI
Rnor_5.0820,515,564 - 20,516,559 (-)NCBI
RGSC_v3.4818,628,573 - 18,629,568 (-)RGD
Celera819,579,022 - 19,580,017 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001000983 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL78392 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001000983   ⟸   NM_001000983
- UniProtKB: A0A0G2KB88 (UniProtKB/TrEMBL),   A6JNH4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000075696   ⟸   ENSRNOT00000086296
Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1334163 AgrOrtholog
BioCyc Gene G2FUF-31508 BioCyc
Ensembl Genes ENSRNOG00000052784 Ensembl
  ENSRNOG00000068168 Ensembl
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report rno:405339 UniProtKB/TrEMBL
NCBI Gene 405339 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PhenoGen Or7d11 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000052784 RatGTEx
  ENSRNOG00000068168 RatGTEx
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A0G2KB88 ENTREZGENE
  A6JNH4 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-08-16 Or7d11  olfactory receptor family 7 subfamily D member 11  Olr1172  olfactory receptor 1172  Symbol and Name Changed 1299863 APPROVED
2022-06-02 Olr1172  olfactory receptor 1172  ENSRNOG00000068168    Data merged from RGD:150345742 737654 PROVISIONAL
2021-08-31 ENSRNOG00000068168        Symbol and Name status set to provisional 45752 PROVISIONAL
2005-12-06 Olr1172  olfactory receptor 1172  Olr1172_predicted  olfactory receptor 1172 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-02-04 Olr1172_predicted  olfactory receptor 1172 (predicted)      Symbol and Name status set to approved 70820 APPROVED